Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:anterior/posterior axis specification
go back to main search page
Accession:GO:0009948 term browser browse the term
Definition:The establishment, maintenance and elaboration of the anterior/posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
Synonyms:related_synonym: anterior/posterior axis determination


show annotations for term's descendants           Sort by:
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKA aurora kinase A acts_upstream_of_or_within ISO (PMID:22939930) MGI PMID:22939930 NCBI chr17:56,954,838...56,972,435 JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964473) Ensembl
MGI		 PMID:10964473 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G CDX1 caudal type homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:151,202,842...151,217,132
Ensembl chr 2:151,202,777...151,216,988 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057 		JBrowse link
G CDX4 caudal type homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:59,089,131...59,100,958
Ensembl chr  X:59,091,946...59,100,431 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18241853)
(PMID:15004567)		 Ensembl
MGI		 PMID:15004567 PMID:18241853 GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G CRIPTO cripto, EGF-CFC family member acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18241853) MGI
Ensembl		 PMID:18241853 GO_REF:0000107 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10662781) Ensembl
MGI		 PMID:10662781 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,785,441...22,789,867
Ensembl chr 5:22,785,445...22,789,829 		JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964473) Ensembl
MGI		 PMID:10964473 GO_REF:0000107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,504...109,973,607 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (PMID:15680351) MGI PMID:15680351 NCBI chr 4:56,859,640...56,863,807
Ensembl chr 4:56,859,663...56,863,788 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15680351) Ensembl
MGI		 PMID:15680351 GO_REF:0000107 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490556) Ensembl
MGI		 PMID:12490556 GO_REF:0000107 NCBI chr14:113,114,302...113,126,455
Ensembl chr14:113,113,179...113,126,816 		JBrowse link
G LEFTY2 left-right determination factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:13,849,052...13,853,438
Ensembl chr10:13,848,174...13,853,438 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LOC100524517 left-right determination factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:15004567) GO_Central
MGI		 PMID:15004567 GO_REF:0000033 NCBI chr10:13,815,157...13,819,249 JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529425) Ensembl
MGI		 PMID:10529425 GO_REF:0000107 NCBI chr15:100,733,552...100,820,603
Ensembl chr15:100,733,560...100,820,585 		JBrowse link
G RNF2 ring finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12183370) Ensembl
MGI		 PMID:12183370 GO_REF:0000107 NCBI chr 9:126,172,637...126,284,567
Ensembl chr 9:126,172,301...126,287,603 		JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,945...95,463,251 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:15155583) MGI PMID:15155583 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:19841259) UniProt PMID:19841259 NCBI chr 6:144,242,639...144,529,659
Ensembl chr 6:144,399,926...144,555,880 		JBrowse link
G WNT3 Wnt family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,627,291...17,681,197
Ensembl chr12:17,628,726...17,681,026 		JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRIPTO cripto, EGF-CFC family member acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9790191) MGI
Ensembl		 PMID:9790191 GO_REF:0000107 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15870281) Ensembl
MGI		 PMID:15870281 GO_REF:0000107 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,913,990...110,921,388
Ensembl chr15:110,914,009...110,921,353 		JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,491,048...38,557,256
Ensembl chr13:38,492,472...38,557,193 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:14668413) MGI PMID:14668413 NCBI chr 3:59,438,152...59,458,988 JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
P granule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLD6 phospholipase D family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:61,057,896...61,060,681
Ensembl chr12:61,057,733...61,060,696 		JBrowse link
G TDRD1 tudor domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:124,526,013...124,575,166
Ensembl chr14:124,529,586...124,573,244 		JBrowse link
G TDRD5 tudor domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:121,245,080...121,337,339
Ensembl chr 9:121,211,960...121,333,220 		JBrowse link
G TDRD6 tudor domain containing 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:41,468,589...41,485,146
Ensembl chr 7:41,468,780...41,483,469 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:239,285,628...239,368,558
Ensembl chr 1:239,271,916...239,368,550 		JBrowse link
G TDRKH tudor and KH domain containing involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:97,415,891...97,438,262
Ensembl chr 4:97,415,914...97,438,691 		JBrowse link
polarity specification of anterior/posterior axis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G WNT8A Wnt family member 8A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16256739) Ensembl
MGI		 PMID:16256739 GO_REF:0000107 NCBI chr 2:140,103,322...140,113,682
Ensembl chr 2:140,103,830...140,109,862 		JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETS2 ETS proto-oncogene 2, transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23552073) Ensembl
MGI		 PMID:23552073 GO_REF:0000107 NCBI chr13:202,464,341...202,483,534
Ensembl chr13:202,468,405...202,484,608 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within
involved_in		 ISO (PMID:11291865) MGI
UniProt		 PMID:11291865 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G GDF3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368929) Ensembl
MGI		 PMID:16368929 GO_REF:0000107 NCBI chr 5:62,835,926...62,841,827
Ensembl chr 5:62,835,880...62,841,884 		JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,219 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11291865) Ensembl
MGI		 PMID:11291865 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21445260) Ensembl
MGI		 PMID:21445260 GO_REF:0000107 NCBI chr14:73,350,358...73,357,064
Ensembl chr14:73,353,258...73,360,654 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:11291865) MGI
UniProt		 PMID:11291865 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,579...186,038,229 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799237) Ensembl
MGI		 PMID:9799237 GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chr15:31,159,214...31,295,891
Ensembl chr15:31,159,223...31,295,893 		JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:11291865) MGI PMID:11291865 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,401...30,001,707 		JBrowse link
G GDF3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368929) Ensembl
MGI		 PMID:16368929 GO_REF:0000107 NCBI chr 5:62,835,926...62,841,827
Ensembl chr 5:62,835,880...62,841,884 		JBrowse link
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chr  X:39,953,764...40,154,197
Ensembl chr  X:39,953,814...40,154,029 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11291865) Ensembl
MGI		 PMID:11291865 GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,274...55,323,539 		JBrowse link
G MESP2 mesoderm posterior bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:20346937) GO_Central
MGI		 PMID:20346937 GO_REF:0000033 NCBI chr 7:55,341,941...55,345,824
Ensembl chr 7:55,342,935...55,345,879 		JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21998026) Ensembl
MGI		 PMID:21998026 GO_REF:0000107
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11291865) MGI PMID:11291865 NCBI chr 1:186,028,575...186,039,026
Ensembl chr 1:186,028,579...186,038,229 		JBrowse link
G RIPPLY1 ripply transcriptional repressor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20346937) MGI
Ensembl		 PMID:20346937 GO_REF:0000107 NCBI chr  X:87,315,355...87,319,580
Ensembl chr  X:87,315,358...87,319,113 		JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20346937) Ensembl
MGI		 PMID:20346937 GO_REF:0000107 NCBI chr 1:82,427,956...82,432,844
Ensembl chr 1:82,428,047...82,432,638 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9420335) Ensembl
MGI		 PMID:9420335 GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G TBX6 T-box transcription factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20346937) Ensembl
MGI		 PMID:20346937 GO_REF:0000107 NCBI chr 3:18,271,983...18,277,864
Ensembl chr 3:18,271,983...18,277,580 		JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (PMID:20178780) MGI PMID:20178780 NCBI chr14:29,390,903...29,400,454
Ensembl chr14:29,390,335...29,400,440 		JBrowse link
thorax and anterior abdomen determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEUROG1 neurogenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,763,091...137,766,787
Ensembl chr 2:137,765,942...137,766,682 		JBrowse link
G TIFAB TIFA inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:137,675,245...137,678,880
Ensembl chr 2:137,672,407...137,678,612 		JBrowse link
G WT1 WT1 transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chr15:88,425,861...88,528,417
Ensembl chr15:88,425,142...88,528,326 		JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10809672) Ensembl
MGI		 PMID:10809672 GO_REF:0000107 NCBI chr 1:145,508,658...145,697,017
Ensembl chr 1:145,508,534...145,695,666 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18943
    multicellular organismal process 8779
      pattern specification process 483
        axis specification 102
          anterior/posterior axis specification 62
            anterior/posterior axis specification, embryo + 18
            intracellular mRNA localization involved in anterior/posterior axis specification + 0
            oocyte anterior/posterior axis specification + 6
            polarity specification of anterior/posterior axis 2
            primitive streak formation 12
            regulation of translation involved in anterior/posterior axis specification 0
            somite rostral/caudal axis specification 14
Path 2
Term Annotations click to browse term
  biological_process 18943
    developmental process 6789
      anatomical structure development 6370
        multicellular organism development 5144
          pattern specification process 483
            regionalization 437
              anterior/posterior pattern specification 231
                anterior/posterior axis specification 62
                  anterior/posterior axis specification, embryo + 18
                  intracellular mRNA localization involved in anterior/posterior axis specification + 0
                  oocyte anterior/posterior axis specification + 6
                  polarity specification of anterior/posterior axis 2
                  primitive streak formation 12
                  regulation of translation involved in anterior/posterior axis specification 0
                  somite rostral/caudal axis specification 14
paths to the root