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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of catabolic process
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Accession:GO:0009896 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
Synonyms:exact_synonym: positive regulation of breakdown;   positive regulation of catabolism;   positive regulation of degradation;   up regulation of catabolic process;   upregulation of catabolic process
 narrow_synonym: activation of catabolic process;   stimulation of catabolic process



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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:136,035,464...136,038,524
Ensembl chr 5:142,151,441...142,154,262
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846)
(PMID:28275056)
UniProt
CACAO
PMID:16126846 PMID:28275056 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:865,290...873,575 JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:32,745,217...32,824,985
Ensembl chr 3:33,050,997...33,123,910
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 6:147,266,039...147,304,289
Ensembl chr 6:151,974,485...151,999,898
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
UniProt PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr2A:43,311,744...43,315,928 JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:53,231,318...53,291,890
Ensembl chr 3:54,449,980...54,514,267
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA InterPro GO_REF:0000002 NCBI chr12:2,057,985...2,118,615
Ensembl chr12:2,007,406...2,065,141
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr11:121,119,720...121,159,513
Ensembl chr11:125,028,616...125,068,807
JBrowse link
G NOCT nocturnin acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr11:54,861,349...54,893,279
Ensembl chr11:58,311,235...58,342,561
JBrowse link
G PATL2 PAT1 homolog 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:23,622,330...23,667,962
Ensembl chr15:41,790,682...41,801,825
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:150,262,907...150,280,215
Ensembl chr 5:156,256,448...156,274,293
JBrowse link
G EXOSC3 exosome component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:37,611,173...37,634,869
Ensembl chr 9:38,552,659...38,558,078
JBrowse link
G EXOSC5 exosome component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,379,884...38,391,309
Ensembl chr19:46,886,326...46,897,703
JBrowse link
G EXOSC9 exosome component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:119,929,004...120,090,367
Ensembl chr2B:238,847,674...239,007,549
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392
JBrowse link
G METTL16 methyltransferase 16, N6-methyladenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,205,584...30,341,979
Ensembl chr 1:31,230,268...31,364,348
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:94,739,120...94,753,934
Ensembl chr 8:96,923,776...96,938,512
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:59,575,703...59,596,447
Ensembl chr20:61,116,645...61,135,769
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:59,701,341...59,742,865
Ensembl chr 8:61,375,832...61,413,911
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase 16, N6-methyladenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:87,796,518...87,837,602
Ensembl chr 1:122,849,903...122,890,959
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:8,479,806...8,538,336
Ensembl chr17:8,468,240...8,519,552
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,815,814...66,848,051
Ensembl chr 5:71,867,224...71,913,384
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:11051545), (PMID:19029303) ComplexPortal PMID:11051545 PMID:19029303 NCBI chr 6:83,491,803...83,527,256 JBrowse link
G YBX1 Y-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:7,032,809...7,077,080
Ensembl chr 5:6,724,029...6,752,159
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA UniProt GO_REF:0000117 NCBI chr11:121,119,720...121,159,513
Ensembl chr11:125,028,616...125,068,807
JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA UniProt GO_REF:0000104 NCBI chr12:32,581,728...32,598,445
Ensembl chr12:32,835,235...32,853,645
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA UniProt GO_REF:0000104 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589099|PMID:15814898) MGI
Ensembl
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589099|PMID:15814898) MGI
Ensembl
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr2A:43,311,744...43,315,928 JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934053|PMID:11337385) MGI
Ensembl
PMID:11337385 GO_REF:0000107 MGI:1934053 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801
JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr12:32,581,728...32,598,445
Ensembl chr12:32,835,235...32,853,645
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266
JBrowse link
G PARN poly(A)-specific ribonuclease acts_upstream_of_or_within ISO (MGI:3785219|PMID:18337750) MGI PMID:18337750 MGI:3785219 NCBI chr16:13,363,879...13,556,054
Ensembl chr16:14,787,881...14,977,786
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:157,682,286...157,707,632
Ensembl chr 6:162,694,724...162,716,700
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589099|PMID:15814898) MGI
Ensembl
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr2B:119,187,659...119,558,347
Ensembl chr2B:238,030,931...238,347,570
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 9:57,433,583...57,498,675
Ensembl chr 9:85,486,521...85,554,745
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG3 BAG cochaperone 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:116,221,747...116,248,692
Ensembl chr10:119,643,963...119,665,964
JBrowse link
G HSPB8 heat shock protein family B (small) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:116,758,785...116,774,883
Ensembl chr12:120,136,986...120,153,102
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730
JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in ISO (PMID:11350920) BHF-UCL PMID:11350920 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G CASP3 caspase 3 involved_in ISO (PMID:14713960)
(MGI:6828711|PMID:9545256)
ComplexPortal PMID:9545256 PMID:14713960 MGI:6828711 NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185
JBrowse link
G ENDOG endonuclease G ISO RGD PMID:16407272 RGD:9685355 NCBI chr 9:99,941,856...99,945,957 JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866
JBrowse link
G IGFBP3 insulin like growth factor binding protein 3 ISO RGD PMID:15125883 RGD:10402776 NCBI chr 7:46,564,234...46,573,145 JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:28433754) ARUK-UCL PMID:28433754 NCBI chr 7:23,415,922...23,420,767 JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG2A autophagy related 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,251,169...60,273,831
Ensembl chr11:63,591,896...63,614,902
JBrowse link
G BECN1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,490,488...111,583,703
Ensembl chr 1:110,654,844...110,744,323
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,571,796...98,623,581
Ensembl chr 9:127,245,508...127,297,645
JBrowse link
G MOAP1 modulator of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,814,859...73,817,607
Ensembl chr14:93,152,551...93,153,606
JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chr10:22,691,355...22,870,628 JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:18,471,609...18,507,916
Ensembl chr17:18,746,712...18,782,296
JBrowse link
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,323,346...31,335,626
Ensembl chr12:31,584,534...31,594,808
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:24,692,363...24,810,685
Ensembl chr2B:139,125,375...139,242,721
JBrowse link
G RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:195,720,895...195,842,619
Ensembl chr 1:200,757,097...200,878,819
JBrowse link
G RALB RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:7,185,192...7,227,220
Ensembl chr2B:120,748,123...120,802,698
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,224,304...119,267,986
Ensembl chr 1:88,077,420...88,121,056
JBrowse link
G SNX18 sorting nexin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,270,053...59,508,359
Ensembl chr 5:61,101,056...61,129,397
JBrowse link
G SNX30 sorting nexin family member 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:83,878,128...83,997,124
Ensembl chr 9:112,031,860...112,143,933
JBrowse link
G SNX4 sorting nexin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:122,578,527...122,652,007
Ensembl chr 3:129,443,369...129,515,917
JBrowse link
G SNX7 sorting nexin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:101,314,484...101,417,388
Ensembl chr 1:100,037,161...100,138,877
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chr12:129,549,399...129,579,087 JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,372,722...41,400,441
Ensembl chr  X:49,224,864...49,233,960
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:62,357,952...62,394,620
Ensembl chr17:67,748,201...67,784,389
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:8,671,682...8,705,625
Ensembl chr17:8,858,872...8,891,276
JBrowse link
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chr16:9,887,877...10,124,500
Ensembl chr16:11,109,869...11,343,512
JBrowse link
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 3:45,825,670...45,903,595
Ensembl chr 3:46,932,148...47,009,676
JBrowse link
G IRGM immunity related GTPase M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:146,274,097...146,329,979
Ensembl chr 5:152,278,581...152,308,182
JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,858,205...32,871,132
Ensembl chr17:37,884,037...37,896,972
JBrowse link
positive regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor ISO RGD PMID:22293957 RGD:7245565 NCBI chr 6:31,828,363...31,831,981
Ensembl chr 6:32,708,251...32,711,641
JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in ISO
IEA
RGD
Ensembl
PMID:25117440 GO_REF:0000107 RGD:11552604 NCBI chr11:46,355,026...46,556,091
Ensembl chr11:46,905,454...47,103,205
JBrowse link
G ATF6 activating transcription factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28747345) MGI
Ensembl
PMID:28747345 GO_REF:0000107 NCBI chr 1:137,178,629...137,382,256
Ensembl chr 1:140,977,750...141,176,725
JBrowse link
G ATG101 autophagy related 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,685,897...36,693,613
Ensembl chr12:37,462,533...37,470,062
JBrowse link
G ATG13 autophagy related 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,567,728...46,623,609
Ensembl chr11:47,126,380...47,182,850
JBrowse link
G ATG16L1 autophagy related 16 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:120,479,534...120,523,563
Ensembl chr2B:239,392,990...239,436,766
JBrowse link
G ATG7 autophagy related 7 ISO RGD PMID:24674959 PMID:25639566 RGD:11553823 RGD:11553824 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
JBrowse link
G BECN1 beclin 1 involved_in ISO
IEA
RGD
Ensembl
PMID:24674959 GO_REF:0000107 RGD:11553823 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:58,628,872...58,836,205
Ensembl chr 9:86,681,953...86,887,958
JBrowse link
G DCN decorin involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr12:88,678,791...88,715,677
Ensembl chr12:91,994,129...92,031,413
JBrowse link
G DHRSX dehydrogenase/reductase X-linked involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:2,165,525...2,370,392 JBrowse link
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:99,941,856...99,945,957 JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160
JBrowse link
G FOXO1 forkhead box O1 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chr13:21,763,729...21,874,279 JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:39,118,330...39,130,768
Ensembl chr19:47,710,197...47,726,948
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:5319706|PMID:22539723)
(MGI:5825416|PMID:26160071)
UniProt
BHF-UCL
PMID:22539723 PMID:26160071 MGI:5319706 MGI:5825416 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:5634889|PMID:20819940)
(PMID:20819940)
RGD
UniProt
PMID:20819940 PMID:23604926 MGI:5634889 RGD:10402086 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
G HPSE heparanase involved_in ISO (PMID:26249176) ComplexPortal PMID:26249176 NCBI chr 4:40,863,491...40,905,693
Ensembl chr 4:46,709,621...46,755,157
JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IRGM immunity related GTPase M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:146,274,097...146,329,979
Ensembl chr 5:152,278,581...152,308,182
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:26581593 RGD:12879823 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161
JBrowse link
G MEFV MEFV innate immuity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,175,858...2,191,056
Ensembl chr16:3,353,666...3,368,970
JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162
JBrowse link
G MTDH metadherin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:94,282,432...94,368,516
Ensembl chr 8:96,473,247...96,551,341
JBrowse link
G OPTN optineurin involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:13,104,335...13,142,725
Ensembl chr10:13,077,345...13,115,773
JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6099440|PMID:28747345)
(PMID:28747345)
MGI
Ensembl
PMID:28747345 GO_REF:0000107 MGI:6099440 NCBI chr17:17,361,624...17,368,194
Ensembl chr17:17,581,612...17,587,741
JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha involved_in ISO (PMID:28910396) CACAO PMID:28910396 NCBI chr11:17,143,024...17,263,920
Ensembl chr11:16,828,966...16,949,856
JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase involved_in ISO (MGI:4361989|PMID:17476689) UniProt PMID:17476689 MGI:4361989 NCBI chr  X:41,210,494...41,216,552
Ensembl chr  X:49,068,721...49,074,731
JBrowse link
G PLEKHF1 pleckstrin homology and FYVE domain containing 1 involved_in ISO (PMID:22115783) BHF-UCL PMID:22115783 NCBI chr19:26,593,833...26,604,514 JBrowse link
G PLK2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,543,828...55,550,116
Ensembl chr 5:57,177,836...57,184,793
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRKD1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,353,284...10,707,841
Ensembl chr14:28,496,282...28,650,030
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:49,046,830...49,138,795
Ensembl chr 8:46,430,131...46,521,722
JBrowse link
G RNF152 ring finger protein 152 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr18:55,180,955...55,264,164
Ensembl chr18:58,507,684...58,508,295
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G SH3BP4 SH3 domain binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:122,179,431...122,284,430
Ensembl chr2B:241,089,624...241,149,524
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,224,304...119,267,986
Ensembl chr 1:88,077,420...88,121,056
JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:31221056 RGD:150521664 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr19:1,188,537...1,210,677 JBrowse link
G SVIP small VCP interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:22,828,321...22,837,536
Ensembl chr11:22,735,361...22,744,558
JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,268,169...41,320,822
Ensembl chr 6:42,574,416...42,627,031
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chr19:3,836,100...3,852,017
Ensembl chr19:4,787,557...4,790,206
JBrowse link
G TMEM59 transmembrane protein 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,305,154...53,326,975
Ensembl chr 1:54,899,026...54,920,478
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:91,545,655...91,569,535
Ensembl chr 8:93,747,162...93,767,196
JBrowse link
G TP53INP2 tumor protein p53 inducible nuclear protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:31,033,855...31,042,976
Ensembl chr20:32,160,155...32,169,227
JBrowse link
G TPCN1 two pore segment channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,812,587...110,903,033
Ensembl chr12:114,209,638...114,286,443
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981
JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,824,176...5,844,990
Ensembl chr11:5,504,864...5,526,730
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707
JBrowse link
G TRIM65 tripartite motif containing 65 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chr17:69,830,734...69,846,276 JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
G TSC2 TSC complex subunit 2 involved_in ISO (MGI:5509101|PMID:23878245) ParkinsonsUK-UCL PMID:23878245 MGI:5509101 NCBI chr16:615,776...655,411
Ensembl chr16:2,135,696...2,175,569
JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:94,356,440...94,389,920
Ensembl chr 6:98,242,756...98,274,377
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:25126726)
(MGI:6810791|PMID:19225151)
(MGI:5319706|PMID:22539723)
UniProt
ComplexPortal
PMID:19225151 PMID:22539723 PMID:25126726 MGI:5319706 MGI:6810791 NCBI chr12:129,549,399...129,579,087 JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:23184933) UniProt PMID:23184933 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L11 BCL2 like 11 ISO RGD PMID:25772147 RGD:13782257 NCBI chr2A:90,862,070...90,909,833
Ensembl chr2A:112,337,927...112,385,079
JBrowse link
G BID BH3 interacting domain death agonist ISO RGD PMID:25772147 RGD:13782257 NCBI chr22:1,164,787...1,205,051
Ensembl chr22:16,594,186...16,632,844
JBrowse link
G DDIT3 DNA damage inducible transcript 3 ISO RGD PMID:25772147 RGD:13782257 NCBI chr12:31,406,332...31,410,293
Ensembl chr12:31,664,743...31,668,701
JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:23698117 RGD:11561968 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634
JBrowse link
G FBXO7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:13,481,255...13,505,301
Ensembl chr22:31,335,423...31,359,224
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
positive regulation of cellular catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G ZER1 zyg-11 related cell cycle regulator involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:99,853,433...99,895,399
Ensembl chr 9:128,519,972...128,560,098
JBrowse link
G ZYG11A zyg-11 family member A, cell cycle regulator involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:52,103,626...52,163,326
Ensembl chr 1:53,708,133...53,764,551
JBrowse link
G ZYG11B zyg-11 family member B, cell cycle regulator involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:51,987,678...52,087,093 JBrowse link
positive regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMER1 APC membrane recruitment protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:53,309,868...53,331,151
Ensembl chr  X:63,396,392...63,399,802
JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:39,231,910...39,242,353
Ensembl chr14:57,499,906...57,510,019
JBrowse link
G EZR ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:156,656,146...156,709,986
Ensembl chr 6:161,670,483...161,723,102
JBrowse link
G FAF1 Fas associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,679,198...50,207,129
Ensembl chr 1:51,188,540...51,606,904
JBrowse link
G FBXL5 F-box and leucine rich repeat protein 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5292406|PMID:21907140) MGI
Ensembl
PMID:21907140 GO_REF:0000107 MGI:5292406 NCBI chr 4:10,050,909...10,107,573
Ensembl chr 4:15,348,977...15,430,631
JBrowse link
G HAMP hepcidin antimicrobial peptide acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5293184|PMID:21700773) MGI
Ensembl
PMID:21700773 GO_REF:0000107 MGI:5293184 NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723
JBrowse link
G MSN moesin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:54,785,309...54,859,364
Ensembl chr  X:64,781,550...64,933,292
JBrowse link
G PTTG1IP PTTG1 interacting protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24506068) MGI
Ensembl
PMID:24506068 GO_REF:0000107 NCBI chr21:31,143,600...31,169,231
Ensembl chr21:44,438,136...44,459,586
JBrowse link
G RDX radixin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:105,075,716...105,176,660
Ensembl chr11:108,921,477...109,005,557
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3839729|PMID:18952128) MGI
Ensembl
PMID:18952128 GO_REF:0000107 MGI:3839729 NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819
JBrowse link
G VGLL4 vestigial like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,489,805...11,654,507
Ensembl chr 3:11,834,746...11,981,877
JBrowse link
G VPS11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:21148287) UniProt PMID:21148287 NCBI chr11:113,905,989...113,920,163
Ensembl chr11:117,835,557...117,849,389
JBrowse link
G VPS35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLK3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,104,564...44,110,162
Ensembl chr 1:45,470,016...45,476,021
JBrowse link
positive regulation of collagen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:4397742|PMID:19834056) MGI PMID:19834056 MGI:4397742 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link
G VSIR V-set immunoregulatory receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,218,230...68,243,687
Ensembl chr10:70,742,062...70,767,613
JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
positive regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO RGD PMID:27895165 RGD:12879393 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAP31 B cell receptor associated protein 31 involved_in ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chr  X:143,265,920...143,274,956 JBrowse link
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:37,210,170...37,221,961
Ensembl chr16:56,343,025...56,355,164
JBrowse link
G LOC100976022 B cell receptor associated protein 31 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:153,137,992...153,161,628 JBrowse link
G SGTA small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:1,778,728...1,808,199
Ensembl chr19:2,736,565...2,763,440
JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,170,416...41,218,656
Ensembl chr 9:82,597,507...82,645,587
JBrowse link
G UBQLN2 ubiquilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:48,829,844...48,835,040
Ensembl chr  X:56,981,985...56,983,859
JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATXN3 ataxin 3 involved_in ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chr14:72,693,446...72,741,772 JBrowse link
G BAG6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,300,126...31,313,829
Ensembl chr 6:32,190,037...32,204,321
JBrowse link
G RNF185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,183,591...12,230,371
Ensembl chr22:30,020,353...30,066,266
JBrowse link
G RNFT1 ring finger protein, transmembrane 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr17:54,016,689...54,029,100
Ensembl chr17:58,858,416...58,869,908
JBrowse link
G RNFT2 ring finger protein, transmembrane 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:114,315,117...114,430,273
Ensembl chr12:117,691,632...117,804,833
JBrowse link
G TMEM67 transmembrane protein 67 ISO RGD PMID:19815549 RGD:8554391 NCBI chr 8:90,378,623...90,442,904
Ensembl chr 8:92,324,402...92,387,437
JBrowse link
G USP13 ubiquitin specific peptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:176,685,541...176,818,360
Ensembl chr 3:184,855,388...184,983,158
JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140
JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chr10:108,965,559...109,019,240
Ensembl chr10:112,407,161...112,457,892
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,275,799...37,331,971
Ensembl chr19:45,791,800...45,840,271
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481
JBrowse link
G FABP1 fatty acid binding protein 1 ISO peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr2A:87,256,032...87,303,505
Ensembl chr2A:89,165,315...89,170,448
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:113,973,191...114,041,127
Ensembl chr2B:232,849,239...232,852,967
JBrowse link
G IRS2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chr13:90,886,095...90,917,724 JBrowse link
G MTLN mitoregulin involved_in ISO (MGI:6278482|PMID:29949755) UniProt PMID:29949755 MGI:6278482 NCBI chr2A:91,481,706...91,514,106
Ensembl chr2A:111,713,514...111,713,933
JBrowse link
G PLIN5 perilipin 5 involved_in ISO PMID:22127648
(MGI:3709110|PMID:17130488)
UniProt PMID:17130488 PMID:22127648 MGI:3709110 RGD:8553692 NCBI chr19:3,542,675...3,555,611 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) BHF-UCL PMID:20007935 NCBI chr 7:19,761,041...19,765,665 JBrowse link
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr 5:155,307,148...155,363,785
Ensembl chr 5:161,923,895...161,979,461
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:4881347|PMID:21074248) UniProt PMID:21074248 MGI:4881347 NCBI chr14:54,522,428...54,578,501
Ensembl chr14:73,376,684...73,410,468
JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895
JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1927687|PMID:11147825) MGI
Ensembl
PMID:11147825 GO_REF:0000107 MGI:1927687 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3766710|PMID:17408640) MGI
Ensembl
PMID:17408640 GO_REF:0000107 MGI:3766710 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826
JBrowse link
G IFNG interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177
JBrowse link
G INS insulin involved_in ISO (PMID:7688386)
(PMID:381941)
BHF-UCL PMID:381941 PMID:7688386 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009
JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,745,765...80,776,153 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G P2RX7 purinergic receptor P2X 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRXL2C peroxiredoxin like 2C involved_in ISO (PMID:29901208) UniProt PMID:29901208 NCBI chr 9:67,737,639...67,751,691 JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G SLC4A4 solute carrier family 4 member 4 acts_upstream_of
involved_in
ISO
IEA
(PMID:21976511)
(MGI:5295108|PMID:21976511)
ARUK-UCL
Ensembl
PMID:21976511 GO_REF:0000107 MGI:5295108 NCBI chr 4:52,659,221...52,994,053
Ensembl chr 4:59,002,200...59,385,608
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:111,445,520...112,275,946
Ensembl chr 3:118,389,250...118,431,453
JBrowse link
positive regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NNT nicotinamide nucleotide transhydrogenase ISO RGD PMID:24722990 RGD:13513981 NCBI chr 5:66,662,249...66,772,352
Ensembl chr 5:71,719,257...71,823,242
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
positive regulation of lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:43,580,752...43,612,637
Ensembl chr 3:44,640,215...44,669,885
JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:9597368 RGD:1625365 NCBI chr 1:178,728,751...178,769,066
Ensembl chr 1:183,023,466...183,063,760
JBrowse link
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:61,855,870...61,863,476
Ensembl chr 1:63,670,516...63,679,194
JBrowse link
G APOA2 apolipoprotein A2 involved_in ISO (PMID:8640403) BHF-UCL PMID:8640403 NCBI chr 1:136,634,754...136,636,122
Ensembl chr 1:140,546,591...140,547,959
JBrowse link
G APOA5 apolipoprotein A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,625,403...111,627,932
Ensembl chr11:115,559,231...115,562,286
JBrowse link
G IL1B interleukin 1 beta involved_in ISO (MGI:3828398|PMID:16865359) BHF-UCL PMID:16865359 MGI:3828398 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G PRKCE protein kinase C epsilon acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367975|PMID:19401415) MGI
Ensembl
PMID:19401415 GO_REF:0000107 MGI:4367975 NCBI chr2A:45,757,629...46,294,064
Ensembl chr2A:46,688,436...47,220,313
JBrowse link
G SCT secretin involved_in ISO (MGI:6259360|PMID:30449620)
(MGI:5562611|PMID:24273196)
UniProt PMID:24273196 PMID:30449620 MGI:5562611 MGI:6259360 NCBI chr11:632,073...634,296 JBrowse link
G SCTR secretin receptor involved_in ISO (MGI:6259360|PMID:30449620)
(MGI:5562611|PMID:24273196)
UniProt PMID:24273196 PMID:30449620 MGI:5562611 MGI:6259360 NCBI chr2B:6,374,400...6,458,595
Ensembl chr2B:119,952,714...120,036,326
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730
JBrowse link
G SESN2 sestrin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5444071|PMID:22958918) MGI
Ensembl
PMID:22958918 GO_REF:0000107 MGI:5444071 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chr 9:63,087,798...63,174,977 JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25332431) MGI
Ensembl
PMID:25332431 GO_REF:0000107 NCBI chr14:58,066,123...58,170,472
Ensembl chr14:77,266,545...77,370,663
JBrowse link
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484) ARUK-UCL
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 9:108,067,633...108,089,742
Ensembl chr 9:137,036,696...137,057,776
JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,323,036...54,355,397
Ensembl chr 1:55,911,016...55,936,456
JBrowse link
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,640,225...10,683,728
Ensembl chr19:11,357,311...11,396,791
JBrowse link
G LRP1 LDL receptor related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,713,938...31,799,287
Ensembl chr12:31,966,149...32,051,979
JBrowse link
G LRP2 LDL receptor related protein 2 involved_in ISO (PMID:9228033) ARUK-UCL PMID:9228033 NCBI chr2B:56,407,871...56,640,471
Ensembl chr2B:173,873,767...174,103,697
JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,699,828...7,726,094
Ensembl chr19:8,554,242...8,573,672
JBrowse link
positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 acts_upstream_of_or_within ISO (PMID:19273585) MGI PMID:19273585 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634
JBrowse link
G BNIP3L BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chr 8:25,661,629...25,685,878
Ensembl chr 8:22,567,428...22,593,004
JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:27,395,054...27,422,282
Ensembl chr 9:28,001,813...28,022,066
JBrowse link
G DCN decorin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr12:88,678,791...88,715,677
Ensembl chr12:91,994,129...92,031,413
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4457987|PMID:20453062)
(PMID:20453062)
MGI
Ensembl
PMID:20453062 GO_REF:0000107 MGI:4457987 NCBI chr 6:143,179,097...143,525,223 JBrowse link
G GNAI3 G protein subunit alpha i3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,925,668...111,971,941
Ensembl chr 1:111,154,060...111,198,768
JBrowse link
G GPSM1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chr 9:107,400,819...107,432,165
Ensembl chr 9:136,383,929...136,410,561
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3847365|PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 MGI:3847365 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G HMOX1 heme oxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5430482|PMID:20705711) MGI
Ensembl
PMID:20705711 GO_REF:0000107 MGI:5430482 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (MGI:5819337|PMID:23778976) ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chr  X:143,988,720...144,010,078
Ensembl chr  X:153,854,493...153,876,092
JBrowse link
G IL4 interleukin 4 involved_in ISO (MGI:5702366|PMID:26416964) UniProt PMID:26416964 MGI:5702366 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109
JBrowse link
G LACRT lacritin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:34,112,452...34,116,737
Ensembl chr12:34,840,543...34,844,620
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:150,086,829...150,221,401
Ensembl chr 5:156,112,358...156,216,706
JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (MGI:5819337|PMID:23778976) ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chr 6:88,398,329...88,470,926
Ensembl chr 6:91,664,263...91,737,468
JBrowse link
G PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,978,368...112,005,064
Ensembl chr11:115,911,803...115,944,351
JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:4361989|PMID:17476689) MGI PMID:17476689 MGI:4361989 NCBI chr  X:41,210,494...41,216,552
Ensembl chr  X:49,068,721...49,074,731
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:19,583,330...19,601,248
Ensembl chr 1:20,627,693...20,645,560
JBrowse link
G RAB12 RAB12, member RAS oncogene family involved_in ISO (MGI:5574288|PMID:23357852) UniProt PMID:23357852 MGI:5574288 NCBI chr18:5,646,023...5,675,920
Ensembl chr18:7,972,938...8,027,500
JBrowse link
G RUFY4 RUN and FYVE domain containing 4 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr2B:105,331,522...105,353,934
Ensembl chr2B:223,932,041...223,952,939
JBrowse link
G SCOC short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr 4:132,740,601...132,749,658
Ensembl chr 4:144,015,642...144,055,397
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:134,845,689...134,852,938
Ensembl chr 5:140,967,399...140,973,846
JBrowse link
G SUPT5H SPT5 homolog, DSIF elongation factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,543,998...36,575,161
Ensembl chr19:45,092,075...45,122,335
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:24,419,271...24,469,164
Ensembl chr12:24,917,246...24,968,587
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,137,236...31,153,398
Ensembl chr13:49,889,041...49,900,488
JBrowse link
G TSC1 TSC complex subunit 1 ISO RGD PMID:23435171 RGD:10448950 NCBI chr 9:104,007,708...104,060,938
Ensembl chr 9:132,638,003...132,675,759
JBrowse link
G TSC2 TSC complex subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4457987|PMID:20453062) MGI
Ensembl
PMID:20453062 GO_REF:0000107 MGI:4457987 NCBI chr16:615,776...655,411
Ensembl chr16:2,135,696...2,175,569
JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,685,294...28,777,176
Ensembl chr10:29,042,331...29,130,591
JBrowse link
positive regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:134,172,724...134,186,227 JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in ISO (MGI:1326990|PMID:9857183) BHF-UCL PMID:9857183 MGI:1326990 NCBI chr 8:38,298,194...38,406,706
Ensembl chr 8:35,473,278...35,581,192
JBrowse link
G ADRA2A adrenoceptor alpha 2A involved_in ISO (PMID:17655843) BHF-UCL PMID:17655843 NCBI chr10:107,669,860...107,673,685 JBrowse link
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:25015123) ARUK-UCL PMID:25015123 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G GPLD1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,257,923...24,332,171
Ensembl chr 6:24,588,672...24,665,229
JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G NRDC nardilysin convertase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:51,038,711...51,130,404
Ensembl chr 1:52,535,603...52,625,998
JBrowse link
G PACSIN3 protein kinase C and casein kinase substrate in neurons 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,122,620...47,131,559
Ensembl chr11:47,676,432...47,684,485
JBrowse link
G RGMA repulsive guidance molecule BMP co-receptor a acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5702499|PMID:26651291) MGI
Ensembl
PMID:26651291 GO_REF:0000107 MGI:5702499 NCBI chr15:71,728,669...71,774,447
Ensembl chr15:90,922,199...90,956,179
JBrowse link
G SH3D19 SH3 domain containing 19 involved_in ISO (PMID:15280379) BHF-UCL PMID:15280379 NCBI chr 4:143,460,618...143,664,796
Ensembl chr 4:155,115,280...155,217,392
JBrowse link
G SNX33 sorting nexin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:54,556,304...54,570,683
Ensembl chr15:74,151,053...74,159,584
JBrowse link
G SNX9 sorting nexin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:155,724,026...155,844,553
Ensembl chr 6:157,824,918...157,903,357
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
positive regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIN28B lin-28 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:102,755,256...102,897,739
Ensembl chr 6:106,640,448...106,772,374
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZSWIM8 zinc finger SWIM-type containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:70,308,480...70,324,729
Ensembl chr10:72,981,196...72,997,070
JBrowse link
positive regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRSF1 G-rich RNA sequence binding factor 1 involved_in ISO (PMID:29967381) UniProt PMID:29967381 NCBI chr 4:53,384,303...53,404,706 JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30217973) UniProt PMID:30217973 NCBI chr11:46,355,026...46,556,091
Ensembl chr11:46,905,454...47,103,205
JBrowse link
G CERS1 ceramide synthase 1 involved_in ISO (PMID:22922758) UniProt PMID:22922758 NCBI chr19:18,308,265...18,334,892 JBrowse link
G GDF1 growth differentiation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,306,513...18,334,328
Ensembl chr19:19,317,173...19,342,487
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:28608965 RGD:13432560 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G SLC25A4 solute carrier family 25 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:177,310,982...177,315,016
Ensembl chr 4:189,531,914...189,534,549
JBrowse link
G SLC25A5 solute carrier family 25 member 5 involved_in ISO (MGI:6407583|PMID:31618756) UniProt PMID:31618756 MGI:6407583 NCBI chr  X:108,501,654...108,504,591
Ensembl chr  X:118,926,743...118,929,624
JBrowse link
G VDAC1 voltage dependent anion channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:129,375,267...129,408,230
Ensembl chr 5:135,529,173...135,560,005
JBrowse link
G VPS13D vacuolar protein sorting 13 homolog D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,978,555...11,260,839
Ensembl chr 1:12,197,389...12,476,612
JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:150,262,907...150,280,215
Ensembl chr 5:156,256,448...156,274,293
JBrowse link
G GTPBP1 GTP binding protein 1 involved_in ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr22:19,621,159...19,648,848
Ensembl chr22:37,438,626...37,462,933
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:737213 GO_REF:0000107 RGD:11554176 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G PRR5L proline rich 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,269,291...36,438,954
Ensembl chr11:36,223,385...36,311,659
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,163,280...1,180,212
Ensembl chr14:19,216,993...19,233,797
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr10:115,603,040...115,607,245 JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,922,655...42,924,679
Ensembl chr19:51,459,529...51,459,945
JBrowse link
G NANOS3 nanos C2HC-type zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:13,427,661...13,443,218
Ensembl chr19:14,170,699...14,173,013
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO PMID:12748283 UniProt PMID:12748283 RGD:11344945 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr2A:43,311,744...43,315,928 JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:18337750) MGI
Ensembl
PMID:18337750 GO_REF:0000107 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
positive regulation of phospholipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC2 apolipoprotein C2 involved_in ISO (PMID:10727238) BHF-UCL PMID:10727238 NCBI chr19:41,892,954...41,896,461 JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG2 BAG cochaperone 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,730,297...56,743,123
Ensembl chr 6:58,360,889...58,373,733
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336
JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,276,292...3,290,433
Ensembl chr20:3,038,779...3,052,789
JBrowse link
G ECSCR endothelial cell surface expressed chemotaxis and apoptosis regulator acts_upstream_of_or_within ISO (PMID:19416853) MGI PMID:19416853 NCBI chr 5:134,819,568...134,833,508 JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO (MGI:5770038|PMID:24709664) UniProt PMID:24709664 MGI:5770038 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G KCNE2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:20,548,631...20,739,999
Ensembl chr21:34,107,443...34,107,814
Ensembl chr21:34,107,443...34,107,814
JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:29,015,155...29,016,987 JBrowse link
G OSBPL7 oxysterol binding protein like 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,715,464...9,729,950
Ensembl chr17:9,897,768...9,912,065
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G PSMC1 proteasome 26S subunit, ATPase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr14:70,873,846...70,889,988
Ensembl chr14:90,225,405...90,241,641
JBrowse link
G PSMC2 proteasome 26S subunit, ATPase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:95,338,743...95,359,353
Ensembl chr 7:108,083,203...108,103,494
JBrowse link
G PSMC3 proteasome 26S subunit, ATPase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr11:47,366,986...47,374,677
Ensembl chr11:47,920,295...47,927,654
JBrowse link
G PSMC4 proteasome 26S subunit, ATPase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr19:37,018,112...37,028,490
Ensembl chr19:45,533,141...45,543,245
JBrowse link
G PSMC5 proteasome 26S subunit, ATPase 5 involved_in IEA GOC GO_REF:0000108 NCBI chr17:57,906,934...57,911,551
Ensembl chr17:63,051,050...63,055,907
JBrowse link
G PSMC6 proteasome 26S subunit, ATPase 6 involved_in IEA GOC GO_REF:0000108 NCBI chr14:33,303,689...33,324,502
Ensembl chr14:51,587,467...51,608,044
JBrowse link
G RNF40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chr16:24,194,293...24,207,460
Ensembl chr16:31,129,352...31,142,280
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:85,683,455...85,741,118
Ensembl chr12:88,989,033...89,046,630
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
G XBP1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:4946566|PMID:21317886) MGI PMID:21317886 MGI:4946566 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589701|PMID:15937334) MGI
Ensembl
PMID:15937334 GO_REF:0000107 MGI:3589701 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5465208|PMID:23152632) MGI PMID:23152632 MGI:5465208 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
JBrowse link
G AURKA aurora kinase A acts_upstream_of_or_within ISO (MGI:3697244|PMID:17060449) MGI PMID:17060449 MGI:3697244 NCBI chr20:52,707,757...52,730,579
Ensembl chr20:53,994,881...54,017,339
JBrowse link
G AXIN1 axin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628833|PMID:16601693) MGI
Ensembl
PMID:16601693 GO_REF:0000107 MGI:3628833 Ensembl chr16:278,239...337,891 JBrowse link
G BAG2 BAG cochaperone 2 NOT|involved_in ISO (MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:6148635 NCBI chr 6:56,730,297...56,743,123
Ensembl chr 6:58,360,889...58,373,733
JBrowse link
G BBS7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22302990) MGI
Ensembl
PMID:22302990 GO_REF:0000107 NCBI chr 4:114,024,949...114,072,000
Ensembl chr 4:125,161,804...125,208,350
JBrowse link
G CBFA2T3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,592,293...69,662,321
Ensembl chr16:89,246,545...89,347,435
JBrowse link
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
JBrowse link
G COP1 COP1 E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:151,459,354...151,727,131
Ensembl chr 1:155,156,185...155,425,156
JBrowse link
G CSNK1A1 casein kinase 1 alpha 1 involved_in ISO (PMID:19364825)
(PMID:11955436)
FlyBase
ParkinsonsUK-UCL
PMID:11955436 PMID:19364825 NCBI chr 5:144,919,775...144,977,105
Ensembl chr 5:150,929,420...150,985,912
JBrowse link
G CSNK1D casein kinase 1 delta involved_in ISO (MGI:3849793|PMID:19414593) UniProt PMID:19414593 MGI:3849793 NCBI chr17:76,648,677...76,683,054
Ensembl chr17:82,462,467...82,494,348
JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,202,599...19,229,344 JBrowse link
G DAB2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:70,951,198...71,004,836
Ensembl chr 5:76,022,143...76,041,443
JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,276,292...3,290,433
Ensembl chr20:3,038,779...3,052,789
JBrowse link
G DET1 DET1 partner of COP1 E3 ubiquitin ligase involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chr15:67,203,101...67,238,185 JBrowse link
G DNAJB2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chr2B:106,536,846...106,544,430
Ensembl chr2B:225,127,967...225,135,556
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008
JBrowse link
G FBXO22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr15:54,817,076...54,849,271
Ensembl chr15:74,410,213...74,441,609
JBrowse link
G GABARAP GABA type A receptor-associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,270,316...7,272,365
Ensembl chr17:7,257,659...7,260,276
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695876|PMID:17189825) MGI
Ensembl
PMID:17189825 GO_REF:0000107 MGI:3695876 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in ISO (PMID:25897075) ARUK-UCL PMID:25897075 NCBI chr19:39,118,330...39,130,768
Ensembl chr19:47,710,197...47,726,948
JBrowse link
G GSK3B glycogen synthase kinase 3 beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5437589|PMID:22660580) MGI
Ensembl
PMID:22660580 GO_REF:0000107 MGI:5437589 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chr 6:31,476,710...31,491,411 JBrowse link
G HSPBP1 HSPA (Hsp70) binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,303,121...52,322,771
Ensembl chr19:60,995,202...61,013,756
JBrowse link
G IL33 interleukin 33 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5437589|PMID:22660580) MGI
Ensembl
PMID:22660580 GO_REF:0000107 MGI:5437589 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
JBrowse link
G KLHL40 kelch like family member 40 involved_in ISO (MGI:5700633|PMID:25940086) UniProt PMID:25940086 MGI:5700633 NCBI chr 3:42,592,977...42,600,100
Ensembl chr 3:43,657,128...43,664,055
JBrowse link
G LOC100974874 E3 ubiquitin-protein ligase CHFR acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5310666|PMID:22285184) MGI
Ensembl
PMID:22285184 GO_REF:0000107 MGI:5310666 NCBI chr12:130,201,704...130,247,891
Ensembl chr12:134,923,458...134,968,832
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MDM2 MDM2 proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
JBrowse link
G NKD2 NKD inhibitor of WNT signaling pathway 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:1,285,217...1,311,285
Ensembl chr 5:1,075,172...1,081,664
JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:25818168), (PMID:27323397)
(MGI:5897550|PMID:21804542)
UniProt PMID:21804542 PMID:25818168 PMID:27323397 MGI:5897550 NCBI chr19:44,739,739...44,751,303 JBrowse link
G NUB1 negative regulator of ubiquitin like proteins 1 involved_in ISO (PMID:16707496) UniProt PMID:16707496 NCBI chr 7:142,927,730...142,964,475
Ensembl chr 7:155,079,243...155,114,676
JBrowse link
G PABIR1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:56,007,323...56,011,655
Ensembl chr 9:67,544,489...67,545,352
JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105
JBrowse link
G PLK1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,420,972...14,432,821
Ensembl chr16:23,928,773...23,940,779
JBrowse link
G PLK2 polo like kinase 2 ISO RGD PMID:18723513 RGD:7241135 NCBI chr 5:55,543,828...55,550,116
Ensembl chr 5:57,177,836...57,184,793
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:46,127,673...46,262,333
Ensembl chr12:47,100,393...47,126,102
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G PSEN2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr 1:202,328,987...202,354,440
Ensembl chr 1:207,320,937...207,346,295
JBrowse link
G PSMD10 proteasome 26S subunit, non-ATPase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:97,182,090...97,189,523
Ensembl chr  X:107,552,186...107,559,616
JBrowse link
G RACK1 receptor for activated C kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:176,462,991...176,470,153
Ensembl chr 5:183,712,665...183,720,128
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,508,232...12,516,068
Ensembl chr19:13,250,718...13,258,482
JBrowse link
G RBX1 ring-box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,845,351...21,866,627
Ensembl chr22:39,941,405...39,962,175
JBrowse link
G RCHY1 ring finger and CHY zinc finger domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:48,691,213...48,725,979
Ensembl chr 4:54,526,202...54,561,048
JBrowse link
G RFPL1 ret finger protein like 1 involved_in ISO (PMID:20725088) UniProt PMID:20725088 NCBI chr22:10,485,218...10,488,052 JBrowse link
G RNF180 ring finger protein 180 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3819024|PMID:18363970), (MGI:5505713|PMID:23926250) MGI
Ensembl
PMID:18363970 PMID:23926250 GO_REF:0000107 MGI:3819024 MGI:5505713 NCBI chr 5:49,624,452...49,841,741
Ensembl chr 5:51,280,064...51,454,750
JBrowse link
G SH3RF2 SH3 domain containing ring finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:141,386,060...141,530,993
Ensembl chr 5:147,401,188...147,545,703
JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799
JBrowse link
G SMAD7 SMAD family member 7 involved_in ISO (PMID:11278251) BHF-UCL PMID:11278251 NCBI chr18:42,306,324...42,337,214 JBrowse link
G SOCS4 suppressor of cytokine signaling 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:35,614,238...35,636,531
Ensembl chr14:53,904,783...53,906,105
JBrowse link
G SOCS5 suppressor of cytokine signaling 5 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr2A:46,813,589...46,878,102
Ensembl chr2A:47,804,431...47,806,041
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:694,414...696,682 JBrowse link
G SUMO1 small ubiquitin like modifier 1 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chr2B:89,461,773...89,493,879
Ensembl chr2B:207,613,654...207,645,590
JBrowse link
G SUMO2 small ubiquitin like modifier 2 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chr17:69,115,433...69,130,065 JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,630,137...60,729,904
Ensembl chr  X:70,684,217...70,782,323
JBrowse link
G TRIB1 tribbles pseudokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:122,115,194...122,123,319
Ensembl chr 8:124,867,359...124,872,924
JBrowse link
G TRIB2 tribbles pseudokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:12,705,043...12,730,932
Ensembl chr2A:12,847,631...12,873,499
JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chr 8:44,435,496...44,488,517
Ensembl chr 8:41,856,429...41,878,320
JBrowse link
G USP5 ubiquitin specific peptidase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,983,941...6,998,469
Ensembl chr12:6,895,416...6,909,936
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
G ZER1 zyg-11 related cell cycle regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:99,853,433...99,895,399
Ensembl chr 9:128,519,972...128,560,098
JBrowse link
G ZFAND2A zinc finger AN1-type containing 2A acts_upstream_of_or_within ISO (MGI:3663213|PMID:16973439) MGI PMID:16973439 MGI:3663213 NCBI chr 7:1,392,979...1,401,283
Ensembl chr 7:1,518,912...1,526,107
JBrowse link
G ZYG11B zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) UniProt PMID:31273098 NCBI chr 1:51,987,678...52,087,093 JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLK3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,104,564...44,110,162
Ensembl chr 1:45,470,016...45,476,021
JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799
JBrowse link
positive regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3618985|PMID:16478791)
(PMID:12952940)
MGI
Ensembl
PMID:12952940 PMID:16478791 GO_REF:0000107 MGI:3618985 NCBI chr 5:108,070,697...108,208,273
Ensembl chr 5:113,904,352...114,009,709
JBrowse link
G ASB9 ankyrin repeat and SOCS box containing 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17148442) MGI
Ensembl
PMID:17148442 GO_REF:0000107 NCBI chr  X:7,869,174...7,896,783
Ensembl chr  X:15,152,698...15,179,182
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase ISO RGD PMID:16874114 RGD:2301238 NCBI chr2B:128,913,323...128,950,112
Ensembl chr2B:247,702,880...247,738,977
JBrowse link
G ATG7 autophagy related 7 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
JBrowse link
G AXIN1 axin 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:278,239...337,891 JBrowse link
G C4BPA complement component 4 binding protein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,707,221...182,747,878
Ensembl chr 1:186,985,264...187,025,898
JBrowse link
G C4BPB complement component 4 binding protein beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,691,574...182,703,004
Ensembl chr 1:186,970,253...186,981,024
JBrowse link
G CBLB Cbl proto-oncogene B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3038342|PMID:14973438) MGI
Ensembl
PMID:14973438 GO_REF:0000107 MGI:3038342 NCBI chr 3:102,752,406...102,966,414
Ensembl chr 3:109,690,120...109,905,191
JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19056892) MGI
Ensembl
PMID:19056892 GO_REF:0000107 NCBI chr12:12,742,258...12,747,404
Ensembl chr12:13,120,306...13,125,541
JBrowse link
G CREBRF CREB3 regulatory factor involved_in ISO (PMID:18391022) UniProt PMID:18391022 NCBI chr 5:168,409,668...168,492,678
Ensembl chr 5:175,318,674...175,403,334
JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:20625391) UniProt PMID:20625391 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126
JBrowse link
G CUL4B cullin 4B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3820198|PMID:18602923) MGI
Ensembl
PMID:18602923 GO_REF:0000107 MGI:3820198 NCBI chr  X:109,798,279...109,870,469
Ensembl chr  X:119,985,116...120,034,702
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336
JBrowse link
G DACT1 dishevelled binding antagonist of beta catenin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16446366) MGI
Ensembl
PMID:16446366 GO_REF:0000107 NCBI chr14:39,231,910...39,242,353
Ensembl chr14:57,499,906...57,510,019
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805
JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:187,603,600...187,672,006
Ensembl chr 1:192,466,408...192,535,071
JBrowse link
G EGLN2 egl-9 family hypoxia inducible factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,842,460...37,851,465
Ensembl chr19:46,349,131...46,357,875
JBrowse link
G FOXO1 forkhead box O1 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chr13:21,763,729...21,874,279 JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,533,172...2,564,301
Ensembl chr19:3,500,117...3,510,867
JBrowse link
G GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432614|PMID:22836275) MGI
Ensembl
PMID:22836275 GO_REF:0000107 MGI:5432614 NCBI chr22:18,526,456...18,551,640
Ensembl chr22:36,359,744...36,384,707
JBrowse link
G GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5432614|PMID:22836275) MGI
Ensembl
PMID:22836275 GO_REF:0000107 MGI:5432614 NCBI chr17:69,185,045...69,208,766
Ensembl chr17:74,737,164...74,762,039
JBrowse link
G GJA1 gap junction protein alpha 1 ISO RGD PMID:12952975 RGD:1582696 NCBI chr 6:119,213,513...119,227,617 JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3790551|PMID:18477453) MGI
Ensembl
PMID:18477453 GO_REF:0000107 MGI:3790551 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:17686886 RGD:10045647 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G IER3 immediate early response 3 acts_upstream_of_or_within ISO (MGI:4437986|PMID:19096392) MGI PMID:19096392 MGI:4437986 NCBI chr 6:30,488,162...30,489,784 JBrowse link
G ITCH itchy E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3038342|PMID:14973438) MGI
Ensembl
PMID:14973438 GO_REF:0000107 MGI:3038342 NCBI chr20:30,690,172...30,840,504
Ensembl chr20:31,852,203...31,971,945
JBrowse link
G LOC100978213 TNF superfamily member 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17389268) MGI
Ensembl
PMID:17389268 GO_REF:0000107 NCBI chr17:7,581,163...7,589,809
Ensembl chr17:7,567,766...7,575,575
JBrowse link
G LPCAT1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4460850|PMID:20018880) MGI
Ensembl
PMID:20018880 GO_REF:0000107 MGI:4460850 NCBI chr 5:1,759,243...1,824,102
Ensembl chr 5:1,503,853...1,544,741
JBrowse link
G MAPK15 mitogen-activated protein kinase 15 ISO Human Estrogen Receptor alpha RGD PMID:12917323 RGD:2304230 NCBI chr 8:140,468,365...140,474,604
Ensembl chr 8:143,481,567...143,492,859
JBrowse link
G MYLIP myosin regulatory light chain interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:15,985,844...16,005,043
Ensembl chr 6:16,350,852...16,370,253
JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3694584|PMID:17137798) MGI
Ensembl
PMID:17137798 GO_REF:0000107 MGI:3694584 NCBI chr 5:137,467,161...137,511,569
Ensembl chr 5:143,600,789...143,622,913
JBrowse link
G NDUFA13 NADH:ubiquinone oxidoreductase subunit A13 involved_in ISO (PMID:17297443) ParkinsonsUK-UCL PMID:17297443 NCBI chr19:18,954,214...18,966,634 JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:2176314|PMID:11748237)
(PMID:14973438)
MGI PMID:11748237 PMID:14973438 MGI:2176314 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076
JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase ISO RGD PMID:18174164 RGD:6893331 NCBI chr18:51,428,077...51,792,995
Ensembl chr18:54,867,149...55,123,423
JBrowse link
G NKD1 NKD inhibitor of WNT signaling pathway 1 involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chr16:30,811,342...30,912,346 JBrowse link
G NSF N-ethylmaleimide sensitive factor, vesicle fusing ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,746,423...10,912,784
Ensembl chr17:10,923,875...11,057,426
JBrowse link
G OAZ1 ornithine decarboxylase antizyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:1,279,139...1,283,079
Ensembl chr19:2,250,678...2,254,179
JBrowse link
G OAZ2 ornithine decarboxylase antizyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:43,629,712...43,645,426
Ensembl chr15:61,919,532...61,933,821
JBrowse link
G OAZ3 ornithine decarboxylase antizyme 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:127,121,375...127,129,940
Ensembl chr 1:130,765,290...130,773,859
JBrowse link
G PLK2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,543,828...55,550,116
Ensembl chr 5:57,177,836...57,184,793
JBrowse link
G PPP2R3A protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chr 3:133,017,166...133,202,163
Ensembl chr 3:140,485,925...140,666,592
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chr 3:125,784,604...125,873,051 JBrowse link
G RHBDD1 rhomboid domain containing 1 involved_in ISO (PMID:18953687)
(PMID:22624035)
UniProt PMID:18953687 PMID:22624035 NCBI chr2B:114,041,381...114,245,220
Ensembl chr2B:232,897,487...233,057,578
JBrowse link
G RHBDD3 rhomboid domain containing 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5492204|PMID:23610400) MGI
Ensembl
PMID:23610400 GO_REF:0000107 MGI:5492204 NCBI chr22:10,315,438...10,323,803
Ensembl chr22:28,123,115...28,131,090
JBrowse link
G RILP Rab interacting lysosomal protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,631,518...1,635,464
Ensembl chr17:1,528,638...1,531,757
JBrowse link
G RNF41 ring finger protein 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,693,349...32,710,866
Ensembl chr12:32,944,814...32,962,584
JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) UniProt PMID:21242315 NCBI chr 1:82,383,313...82,404,612 JBrowse link
G SGSM3 small G protein signaling modulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,275,464...21,314,652
Ensembl chr22:39,402,336...39,411,884
JBrowse link
G SNF8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:8,595,647...8,609,730
Ensembl chr17:8,578,050...8,794,480
JBrowse link
G SNX1 sorting nexin 1 ISO RGD PMID:11110793 RGD:68866 NCBI chr15:43,048,974...43,096,544
Ensembl chr15:61,340,352...61,382,700
JBrowse link
G SORL1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:116,297,014...116,477,399
Ensembl chr11:120,222,491...120,402,432
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:50,883,088...50,885,542
Ensembl chr 8:48,257,287...48,259,808
JBrowse link
G SOX9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:3839710|PMID:19047045) MGI PMID:19047045 MGI:3839710 NCBI chr17:66,028,737...66,034,122 JBrowse link
G STX5 syntaxin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:58,162,269...58,187,427
Ensembl chr11:61,516,348...61,541,509
JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23275542) MGI
Ensembl
PMID:23275542 GO_REF:0000107 NCBI chr 3:153,730,307...153,762,442
Ensembl chr 3:161,783,999...161,816,525
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819
JBrowse link
G TRIM32 tripartite motif containing 32 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610252|PMID:16243356) MGI
Ensembl
PMID:16243356 GO_REF:0000107 MGI:3610252 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
G VIP vasoactive intestinal peptide involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 6:150,564,545...150,573,582
Ensembl chr 6:155,254,652...155,263,730
JBrowse link
G VPS28 VPS28 subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:141,189,967...141,195,482
Ensembl chr 8:144,180,081...144,185,175
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12952940) MGI
Ensembl
PMID:12952940 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
G ZNF268 zinc finger protein 268 involved_in ISO (PMID:23091055) UniProt PMID:23091055 NCBI chr12:130,661,530...130,686,086
Ensembl chr12:135,265,137...135,290,457
JBrowse link
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,400,503...2,421,132
Ensembl chr11:2,437,991...2,449,308
JBrowse link
positive regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5IF1 ATP synthase inhibitory factor subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,495,250...27,497,255
Ensembl chr 1:28,532,091...28,542,607
JBrowse link
G CTSC cathepsin C involved_in ISO PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chr11:83,299,827...83,345,383
Ensembl chr11:86,890,010...86,933,847
JBrowse link
G LAPTM5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) ARUK-UCL PMID:22949502 MGI:5444793 NCBI chr 1:30,005,941...30,031,366
Ensembl chr 1:31,032,963...31,058,385
JBrowse link
G LOC100986882 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851
JBrowse link
G RGN regucalcin ISO RGD PMID:1513338 RGD:9590188 NCBI chr  X:39,513,135...39,530,188
Ensembl chr  X:47,371,226...47,388,881
JBrowse link
positive regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:119,654,019...119,664,918
Ensembl chr 3:126,558,924...126,569,807
JBrowse link
G GIT1 GIT ArfGAP 1 ISO RGD PMID:18523162 RGD:13513208 NCBI chr17:27,185,025...27,201,146
Ensembl chr17:27,706,776...27,717,857
JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in ISO (PMID:15514116) BHF-UCL PMID:15514116 NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861
JBrowse link
G ITCH itchy E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:30,690,172...30,840,504
Ensembl chr20:31,852,203...31,971,945
JBrowse link
G LAPTM5 lysosomal protein transmembrane 5 involved_in ISO (MGI:4460047|PMID:20519653) ARUK-UCL PMID:20519653 MGI:4460047 NCBI chr 1:30,005,941...30,031,366
Ensembl chr 1:31,032,963...31,058,385
JBrowse link
G PTPN1 protein tyrosine phosphatase non-receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,854,918...46,929,509
Ensembl chr20:47,983,098...48,057,421
JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chr17:73,811,249...73,822,719
Ensembl chr17:79,347,505...79,359,349
JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910
JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXW8 F-box and WD repeat domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:114,487,476...114,607,384
Ensembl chr12:117,863,254...117,983,269
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in ISO (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MAPK9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135
JBrowse link
G MKRN2 makorin ring finger protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:12,481,268...12,510,196
Ensembl chr 3:12,824,341...12,853,520
JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126
JBrowse link
positive regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAC arylacetamide deacetylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:148,820,706...148,853,422
Ensembl chr 3:156,408,950...156,423,847
JBrowse link
G ABHD5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:43,580,752...43,612,637
Ensembl chr 3:44,640,215...44,669,885
JBrowse link
G APOA4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382
JBrowse link
G APOA5 apolipoprotein A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,625,403...111,627,932
Ensembl chr11:115,559,231...115,562,286
JBrowse link
G APOC2 apolipoprotein C2 involved_in ISO (PMID:10727238) BHF-UCL PMID:10727238 NCBI chr19:41,892,954...41,896,461 JBrowse link
G APOH apolipoprotein H ISO RGD PMID:7078428 RGD:8554677 NCBI chr17:60,154,389...60,171,762
Ensembl chr17:65,365,250...65,382,483
JBrowse link
G DAGLB diacylglycerol lipase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:6,995,425...7,034,279
Ensembl chr 7:6,605,250...6,634,169
JBrowse link
G FGF21 fibroblast growth factor 21 ISO RGD PMID:23262585 RGD:10401916 NCBI chr19:45,755,466...45,758,472 JBrowse link
G LDLR low density lipoprotein receptor ISO RGD PMID:28469073 RGD:12910100 NCBI chr19:10,640,225...10,683,728
Ensembl chr19:11,357,311...11,396,791
JBrowse link
G PNPLA2 patatin like phospholipase domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:838,339...844,035
Ensembl chr11:881,934...886,896
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:23296834) AgBase PMID:23296834 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGBL4 AGBL carboxypeptidase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6149282|PMID:29593216) MGI
Ensembl
PMID:29593216 GO_REF:0000107 MGI:6149282 NCBI chr 1:47,807,888...49,264,213
Ensembl chr 1:49,317,846...50,770,741
JBrowse link
G AXIN1 axin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3628833|PMID:16601693) MGI
Ensembl
PMID:16601693 GO_REF:0000107 MGI:3628833 Ensembl chr16:278,239...337,891 JBrowse link
G CCDC22 coiled-coil domain containing 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,535,439...41,550,547
Ensembl chr  X:49,387,980...49,402,742
JBrowse link
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISO (PMID:16173922) UniProt PMID:16173922 NCBI chr17:9,556,313...9,567,099
Ensembl chr17:9,738,141...9,749,302
JBrowse link
G CLU clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
JBrowse link
G DISC1 DISC1 scaffold protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4837265|PMID:20880836) MGI
Ensembl
PMID:20880836 GO_REF:0000107 MGI:4837265 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079
JBrowse link
G EGF epidermal growth factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460
JBrowse link
G FBXO22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr15:54,817,076...54,849,271
Ensembl chr15:74,410,213...74,441,609
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351
JBrowse link
G LAPTM5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870)
(MGI:6478861|PMID:24638062)
ARUK-UCL PMID:18619870 PMID:24638062 MGI:3803048 MGI:6478861 NCBI chr 1:30,005,941...30,031,366
Ensembl chr 1:31,032,963...31,058,385
JBrowse link
G LOC100970998 small ubiquitin like modifier 3 acts_upstream_of_or_within ISO (MGI:3813414|PMID:18644859) MGI PMID:18644859 MGI:3813414 NCBI chr 1:224,215,377...224,217,052 JBrowse link
G MAGEF1 MAGE family member F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,750,186...181,751,900
Ensembl chr 3:190,229,865...190,230,791
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:21241890) BHF-UCL PMID:21241890 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605
JBrowse link
G PTK2 protein tyrosine kinase 2 involved_in ISO (MGI:5306293|PMID:18206965) UniProt PMID:18206965 MGI:5306293 NCBI chr 8:137,330,777...137,677,306
Ensembl chr 8:140,412,773...140,684,898
JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:26,580,855...26,729,378
Ensembl chr 8:23,869,825...23,932,474
JBrowse link
G PYHIN1 pyrin and HIN domain family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,283,998...134,329,531
Ensembl chr 1:138,081,611...138,127,115
JBrowse link
G RNF139 ring finger protein 139 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:121,158,715...121,172,069
Ensembl chr 8:123,912,589...123,924,720
JBrowse link
G SMURF1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:90,995,923...91,112,240
Ensembl chr 7:104,500,965...104,568,046
JBrowse link
G TRIM67 tripartite motif containing 67 acts_upstream_of_or_within ISO (MGI:5427306|PMID:22337885) MGI PMID:22337885 MGI:5427306 NCBI chr 1:206,710,490...206,770,111 JBrowse link
G VCP valosin containing protein ISO RGD PMID:16103111 RGD:1599730 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,571,796...98,623,581
Ensembl chr 9:127,245,508...127,297,645
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299952|PMID:22033934) MGI
Ensembl
PMID:22033934 GO_REF:0000107 MGI:5299952 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299952|PMID:22033934) MGI
Ensembl
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr 7:31,060,245...31,109,012
Ensembl chr 7:31,182,275...31,208,742
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299952|PMID:22033934) MGI
Ensembl
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773
JBrowse link
G OPTN optineurin involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:13,104,335...13,142,725
Ensembl chr10:13,077,345...13,115,773
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299952|PMID:22033934) MGI
Ensembl
PMID:22033934 GO_REF:0000107 MGI:5299952 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268
JBrowse link
G RNF31 ring finger protein 31 involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chr14:4,923,391...4,936,959 JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:24,419,271...24,469,164
Ensembl chr12:24,917,246...24,968,587
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:5299952|PMID:22033934) MGI PMID:22033934 MGI:5299952 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
RNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DXO decapping exoribonuclease involved_in ISO (MGI:5488528|PMID:23523372) UniProt PMID:23523372 MGI:5488528 NCBI chr 6:31,630,523...31,632,363
Ensembl chr 6:32,517,086...32,519,566
JBrowse link
G LIN28B lin-28 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:102,755,256...102,897,739
Ensembl chr 6:106,640,448...106,772,374
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2152007|PMID:11588035) MGI
Ensembl
PMID:11588035 GO_REF:0000107 MGI:2152007 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
G ZC3H18 zinc finger CCCH-type containing 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:69,282,652...69,345,077
Ensembl chr16:88,944,517...89,005,199
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2152007|PMID:11588035) MGI
Ensembl
PMID:11588035 GO_REF:0000107 MGI:2152007 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15230
    metabolic process 9937
      catabolic process 2120
        positive regulation of catabolic process 474
          positive regulation of anthocyanin catabolic process 0
          positive regulation of cellodextrin catabolic process 0
          positive regulation of cellooligosaccharide catabolic process 0
          positive regulation of cellotriose catabolic process 0
          positive regulation of cellular catabolic process + 414
          positive regulation of collagen catabolic process 2
          positive regulation of cyclodextrin catabolic process 0
          positive regulation of ethanol catabolic process + 0
          positive regulation of galactoglucomannan catabolic process 0
          positive regulation of galactomannan catabolic process 0
          positive regulation of glucose catabolic process to lactate via pyruvate 1
          positive regulation of lipid catabolic process + 31
          positive regulation of pectin catabolic process 0
          positive regulation of pentose catabolic process to ethanol + 0
          positive regulation of prostaglandin catabolic process 0
          positive regulation of protein catabolic process + 211
Path 2
Term Annotations click to browse term
  biological_process 15230
    biological regulation 10799
      regulation of biological process 10214
        regulation of metabolic process 5963
          positive regulation of metabolic process 3595
            positive regulation of catabolic process 474
              positive regulation of anthocyanin catabolic process 0
              positive regulation of cellodextrin catabolic process 0
              positive regulation of cellooligosaccharide catabolic process 0
              positive regulation of cellotriose catabolic process 0
              positive regulation of cellular catabolic process + 414
              positive regulation of collagen catabolic process 2
              positive regulation of cyclodextrin catabolic process 0
              positive regulation of ethanol catabolic process + 0
              positive regulation of galactoglucomannan catabolic process 0
              positive regulation of galactomannan catabolic process 0
              positive regulation of glucose catabolic process to lactate via pyruvate 1
              positive regulation of lipid catabolic process + 31
              positive regulation of pectin catabolic process 0
              positive regulation of pentose catabolic process to ethanol + 0
              positive regulation of prostaglandin catabolic process 0
              positive regulation of protein catabolic process + 211
paths to the root