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ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of catabolic process
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Accession:GO:0009895 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
Synonyms:exact_synonym: down regulation of catabolic process;   downregulation of catabolic process;   negative regulation of breakdown;   negative regulation of catabolism;   negative regulation of degradation
 narrow_synonym: inhibition of catabolic process

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negative regulation of catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25301068)		 UniProt
RGD		 PMID:25301068 GO_REF:0000024 NCBI chr19:52,733,161...52,750,307
Ensembl chr19:52,733,161...52,750,307 		JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA		 (PMID:22547059)
PMID:21873635		 RGD PMID:22547059, PMID:21873635 RGD:13792537 NCBI chr13:109,505,021...109,520,976
Ensembl chr13:109,505,697...109,520,419 		JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,836,517...61,975,640
Ensembl chr 9:64,480,031...64,573,660
Ensembl chr 9:64,480,031...64,573,660 		JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)		 UniProt
RGD		 PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 MGI:6105829 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS		 (PMID:12034726)
GO_REF:0000024		 RGD
UniProt		 PMID:12034726 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:5306322
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353 		JBrowse link
G LOC681410 hypothetical protein LOC681410 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:6,909,166...6,912,145
Ensembl chr17:6,909,728...6,910,630 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:4367529|PMID:19508861)		 Ensembl
RGD		 PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:171,037,891...171,050,500
Ensembl chr 3:171,037,957...171,050,475 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS		 (PMID:15014438)
GO_REF:0000024		 RGD
UniProt		 PMID:15014438 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
IBA		 GO_REF:0000107
(PMID:19029303)
PMID:21873635		 Ensembl
RGD		 PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:19029303)		 Ensembl
RGD		 PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19029303)		 UniProt
RGD		 PMID:19029303 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:3057047 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480 		JBrowse link
G Axin2 axin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17072303)		 Ensembl
RGD		 PMID:17072303 GO_REF:0000107 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:11574538)		 UniProt
RGD		 PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:5439239 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:29,608,588...29,611,212
Ensembl chr18:29,608,588...29,611,212 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO (PMID:15766563) RGD PMID:15766563 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285 PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
(MGI:5559905|PMID:24394384), (MGI:5922838|PMID:27609837)
(PMID:19029303), (PMID:21613615), (PMID:31358969)		 UniProt
RGD		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 GO_REF:0000024 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432 		JBrowse link
G Fus FUS RNA binding protein involved_in ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:199,412,805...199,426,705
Ensembl chr 1:199,412,834...199,426,702 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO
ISS
IEA		 (PMID:12358785)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IDA RGD PMID:15192077 RGD:1357938 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO MGI:3707541 (MGI:5291883|PMID:21822257) RGD PMID:21822257 MGI:5291883 NCBI chr13:48,031,325...48,056,394
Ensembl chr13:48,031,410...48,056,394 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091 PMID:28673543 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO MGI:2179724 (MGI:2158083|PMID:11741878) RGD PMID:11741878 MGI:2158083 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in IBA
ISO		 PMID:21873635
(MGI:5770021|PMID:26742488)		 RGD PMID:26742488, PMID:21873635 MGI:5770021, RGD:13792537 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967 		JBrowse link
G Noct nocturnin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5308514|PMID:22073225)		 UniProt
RGD		 PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869 		JBrowse link
G Qk quaking IMP RGD PMID:16855020 RGD:10045995 NCBI chr 1:50,983,647...51,050,692
Ensembl chr 1:50,828,134...51,052,340 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698) RGD PMID:25397698 MGI:5644240 NCBI chr 2:181,828,931...181,874,223
Ensembl chr 2:181,831,244...181,874,223 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857755 (MGI:85148|PMID:9009318)		 Ensembl
RGD		 PMID:9009318 GO_REF:0000107 MGI:85148 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) RGD PMID:21822258 MGI:5291882 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 involved_in ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:70,689,863...70,721,892
Ensembl chr10:70,689,863...70,721,892 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:92,935,474...92,942,267
Ensembl chr 8:92,937,739...92,942,076 		JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:151,692,068...151,699,381
Ensembl chr 5:151,692,108...151,700,246 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO
ISS
IBA		 (PMID:28931820)
(MGI:5926094|PMID:28931820)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:28931820, PMID:21873635 GO_REF:0000024 MGI:5926094, RGD:13792537 NCBI chr 2:202,797,766...202,816,562
Ensembl chr 2:202,798,198...202,816,562 		JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,911,641...78,994,467
Ensembl chr  X:78,991,223...78,992,735 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS		 (PMID:18794151)
GO_REF:0000024		 RGD
UniProt		 PMID:18794151 GO_REF:0000024 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263 		JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (MGI:5291882|PMID:21822258) RGD PMID:21822258 MGI:5291882 NCBI chr 3:2,746,061...2,770,690
Ensembl chr 3:2,746,075...2,770,620 		JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4355787|PMID:17785852), (MGI:5291882|PMID:21822258)		 Ensembl
RGD		 PMID:17785852 PMID:21822258 GO_REF:0000107 MGI:4355787 MGI:5291882 NCBI chr20:44,679,861...44,722,874
Ensembl chr20:44,680,449...44,722,872 		JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (MGI:5291882|PMID:21822258) RGD PMID:21822258 MGI:5291882 NCBI chr13:110,758,556...110,801,871
Ensembl chr13:110,758,761...110,784,209 		JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
G Vip vasoactive intestinal peptide involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31358969)		 UniProt
RGD		 PMID:31358969 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475 		JBrowse link
G Ybx2 Y box binding protein 2 acts_upstream_of_or_within ISO MGI:3576937 (MGI:3696301|PMID:17035640) RGD PMID:17035640 MGI:3696301 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 involved_in ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136 		JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha involved_in
acts_upstream_of_or_within		 ISO (PMID:15572351)
MGI:2179456 (MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)		 RGD PMID:10601318 PMID:14663139 PMID:15572351 MGI:2182584 MGI:3029597 NCBI chr 5:165,922,893...165,935,822
Ensembl chr 5:165,922,915...165,935,821 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:166,409,460...166,430,291
Ensembl chr 5:166,409,461...166,430,254 		JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:11,146,359...11,153,936
Ensembl chr10:11,146,359...11,153,936 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823 		JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 acts_upstream_of_or_within ISO MGI:2683833 (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:21975012) RGD PMID:21975012 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (MGI:5543871|PMID:23918802) RGD PMID:23918802 MGI:5543871 NCBI chr20:4,576,033...4,592,980
Ensembl chr20:4,576,057...4,592,980 		JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 involved_in ISO
ISS		 (PMID:25495476)
GO_REF:0000024		 RGD
GO_Central		 PMID:25495476 GO_REF:0000024 NCBI chr 8:39,305,128...39,350,270
Ensembl chr 8:39,305,128...39,350,270 		JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25495476)		 GO_Central
Ensembl
RGD		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:963,903...1,003,955
Ensembl chr 6:963,907...1,004,001 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IBA
ISO		 PMID:21873635
(PMID:23916833)		 RGD PMID:23916833, PMID:21873635 RGD:13792537 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584 		JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2450997 (MGI:5510937|PMID:23695157)		 RGD PMID:23695157, PMID:21873635 MGI:5510937, RGD:13792537 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO		 GO_REF:0000024
(PMID:20181828)		 UniProt
RGD		 PMID:20181828 GO_REF:0000024 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524 		JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
ISS		 (PMID:25484098)
PMID:21873635
GO_REF:0000024		 RGD
GO_Central		 PMID:25484098, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:56,605,078...56,609,236
Ensembl chr10:56,605,140...56,609,233 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415 		JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:72,124,408...72,202,703
Ensembl chr 6:72,124,417...72,202,713 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:200,076,079...200,096,861
Ensembl chr 2:200,076,054...200,098,076 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:47,019,326...47,026,465
Ensembl chr10:47,018,974...47,026,465 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:31806350)		 UniProt
RGD		 PMID:31806350, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544 		JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892 		JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
ISS
IBA		 (PMID:25484098)
GO_REF:0000024
PMID:21873635		 RGD
GO_Central		 PMID:25484098, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:56,605,078...56,609,236
Ensembl chr10:56,605,140...56,609,233 		JBrowse link
G Rubcn rubicon autophagy regulator involved_in IBA
ISO		 PMID:21873635
(PMID:21062745)		 RGD PMID:21062745, PMID:21873635 RGD:13792537 NCBI chr11:71,150,506...71,199,254
Ensembl chr11:71,151,132...71,197,035 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS		 (PMID:31806350)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:31806350, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:187,915,701...187,931,035
Ensembl chr 2:187,915,751...187,931,035 		JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18387192) RGD PMID:18387192 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in IEA
ISO		 GO_REF:0000107
(MGI:3796473|PMID:18281291)		 Ensembl
RGD		 PMID:18281291 GO_REF:0000107 MGI:3796473 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374 		JBrowse link
G Becn1 beclin 1 acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297 		JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO
IBA		 (PMID:23629966)
(MGI:5490676|PMID:23629966)
PMID:21873635		 RGD PMID:23629966, PMID:21873635 MGI:5490676, RGD:13792537 NCBI chr 3:110,303,515...110,324,125
Ensembl chr 3:110,306,067...110,324,084 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:29164996)		 UniProt
RGD		 PMID:29164996 GO_REF:0000024 NCBI chr 5:173,314,219...173,318,384
Ensembl chr 5:173,314,228...173,318,313 		JBrowse link
G Dap death-associated protein involved_in IBA
ISO		 PMID:21873635
(PMID:20537536)		 RGD PMID:20537536, PMID:21873635 RGD:13792537 NCBI chr 2:84,275,884...84,328,998
Ensembl chr 2:84,275,884...84,328,998 		JBrowse link
G Dapl1 death associated protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:45,538,408...45,559,281
Ensembl chr 3:45,538,797...45,559,331 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 2:243,819,616...243,853,987
Ensembl chr 2:243,820,661...243,852,631 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524 		JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 1:175,883,362...175,895,510
Ensembl chr 1:175,883,363...175,895,510 		JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 5:156,343,663...156,564,037
Ensembl chr 5:156,396,695...156,564,037 		JBrowse link
G Foxk1 forkhead box K1 involved_in ISO (PMID:25402684) RGD PMID:25402684 NCBI chr12:14,183,436...14,244,634
Ensembl chr12:14,180,029...14,244,316 		JBrowse link
G Foxk2 forkhead box K2 involved_in ISO (MGI:5615527|PMID:25402684) RGD PMID:25402684 MGI:5615527 NCBI chr10:110,468,905...110,518,854
Ensembl chr10:110,469,290...110,518,848 		JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:19901028 RGD:5131537 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965 		JBrowse link
G Golga2 golgin A2 involved_in ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:11,317,328...11,337,569
Ensembl chr 3:11,317,183...11,336,458 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:4461108 NCBI chr 8:72,029,550...72,198,363
Ensembl chr 8:72,029,489...72,198,358 		JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20099302)		 UniProt
Ensembl
RGD		 PMID:20099302 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:93,112,781...93,130,135
Ensembl chr 9:93,112,805...93,125,014 		JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392 		JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr 8:49,558,062...49,573,891
Ensembl chr 8:49,560,035...49,573,742 		JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (MGI:3575206|PMID:15680329) RGD PMID:15680329 MGI:3575206 NCBI chr10:39,620,535...39,622,973
Ensembl chr10:39,620,563...39,622,973 		JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:136,967,650...137,014,402
Ensembl chr 5:136,967,650...137,014,430 		JBrowse link
G Klhl22 kelch-like family member 22 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:29769719)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:29769719 GO_REF:0000024 GO_REF:0000107 NCBI chr11:87,646,489...87,718,808
Ensembl chr11:87,677,966...87,718,826 		JBrowse link
G Lep leptin involved_in ISO
ISS		 (PMID:25060689)
(MGI:5705211|PMID:25060689)
GO_REF:0000024		 RGD
UniProt		 PMID:25060689 GO_REF:0000024 MGI:5705211 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818 		JBrowse link
G Lepr leptin receptor involved_in ISO
IEA
ISS		 (PMID:25060689)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25060689 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:120,503,475...120,682,281
Ensembl chr 5:120,564,645...120,682,221 		JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 2:197,786,212...197,788,992 JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921 		JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4881636|PMID:20544854)		 UniProt
RGD		 PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139 		JBrowse link
G Mtmr9 myotubularin related protein 9 involved_in IBA
ISO		 PMID:21873635
UniProtKB:Q96EF0-1 (PMID:22647598)		 RGD PMID:22647598, PMID:21873635 RGD:13792537 NCBI chr15:46,697,262...46,719,296
Ensembl chr15:46,693,383...46,719,252 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IMP
ISO
ISS		 (MGI:5285135|PMID:21258367)
GO_REF:0000024
(PMID:22424946), (PMID:22576015), (PMID:30704899)		 RGD
UniProt		 PMID:21258367 PMID:22424946 PMID:22576015 PMID:30704899, PMID:24725502 GO_REF:0000024 MGI:5285135, RGD:10040964 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IMP RGD PMID:26601421 RGD:13781888 NCBI chr 6:52,122,085...52,156,473
Ensembl chr 6:52,122,085...52,156,472 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
IMP		 GO_REF:0000024
(MGI:6283395|PMID:20181828)
(PMID:20181828)		 UniProt
RGD		 PMID:20181828, PMID:20181828 GO_REF:0000024 MGI:6283395, RGD:14390062 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524 		JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119 		JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348 		JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:101,609,209...101,621,648
Ensembl chr 1:101,610,773...101,621,646 		JBrowse link
G Rnf5 ring finger protein 5 acts_upstream_of_or_within ISO MGI:3775796 (MGI:5469257|PMID:23093945) RGD PMID:23093945 MGI:5469257 NCBI chr20:4,366,244...4,368,690
Ensembl chr20:4,366,246...4,368,693 		JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
ISS		 (PMID:25936802)
GO_REF:0000024		 RGD
UniProt		 PMID:25936802 GO_REF:0000024 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662 		JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO (PMID:19270696) RGD PMID:19270696 NCBI chr11:71,150,506...71,199,254
Ensembl chr11:71,151,132...71,197,035 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20543840)		 UniProt
Ensembl
RGD		 PMID:20543840 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233 		JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in IEA
ISO		 GO_REF:0000107
(PMID:22613832)		 Ensembl
RGD		 PMID:22613832 GO_REF:0000107 NCBI chr14:79,172,272...79,438,765
Ensembl chr14:79,205,466...79,438,764 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:5906931 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013 		JBrowse link
G Washc1 WASH complex subunit 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5519172|PMID:23974797)		 Ensembl
RGD		 PMID:23974797 GO_REF:0000107 MGI:5519172 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860 		JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 8:117,358,345...117,364,761
Ensembl chr 8:117,358,787...117,366,096 		JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 involved_in ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:45,247,724...45,263,422
Ensembl chr17:45,247,776...45,263,418 		JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415 		JBrowse link
G Tspo translocator protein involved_in ISO (PMID:25470454)
(MGI:5689082|PMID:25470454)		 RGD PMID:25470454 MGI:5689082 NCBI chr 7:124,460,358...124,470,610
Ensembl chr 7:124,460,358...124,470,609 		JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid-induced differentiation factor involved_in ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16173922)		 UniProt
Ensembl
RGD		 PMID:16173922 GO_REF:0000024 GO_REF:0000107 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19903888)		 UniProt
Ensembl
RGD		 PMID:19903888 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286 		JBrowse link
G Nell1 neural EGFL like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21723284)		 UniProt
RGD		 PMID:21723284 GO_REF:0000024 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958 		JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 5:59,080,290...59,088,777
Ensembl chr 5:59,080,765...59,088,523 		JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 1:247,688,778...247,784,219
Ensembl chr 1:247,688,789...247,781,875 		JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO
ISS
NAS		 UniProtKB:P10619 (PMID:12505983)
(MGI:5700310|PMID:12505983)
GO_REF:0000024		 RGD
ParkinsonsUK-UCL		 PMID:12505983, PMID:12505983 GO_REF:0000024 MGI:5700310, RGD:10412300 NCBI chr 3:161,298,750...161,304,627
Ensembl chr 3:161,298,962...161,304,625 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:20697033) RGD PMID:20697033 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285 		JBrowse link
negative regulation of collagen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456 		JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904 		JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615 		JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO
ISS		 (PMID:23129660)
GO_REF:0000024		 RGD
UniProt		 PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319 		JBrowse link
G Svip small VCP interacting protein involved_in IBA
ISO
IC		 PMID:21873635
(PMID:17872946)
PMID:17000876		 RGD PMID:17872946, PMID:21873635, PMID:17000876 RGD:13792537, RGD:10047192 NCBI chr 1:107,368,117...107,373,807
Ensembl chr 1:107,368,117...107,373,807 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,178,785...1,216,573
Ensembl chr18:1,178,787...1,216,409 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3813160|PMID:18606867)		 UniProt
RGD		 PMID:18606867 GO_REF:0000024 MGI:3813160 NCBI chr 1:162,703,394...162,713,560
Ensembl chr 1:162,703,442...162,713,610 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:15,436,080...15,558,646
Ensembl chr11:15,436,269...15,558,646
Ensembl chr11:15,436,269...15,558,646 		JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334), (MGI:3629477|PMID:12920182) RGD PMID:12920182 PMID:15677334 MGI:3530688 MGI:3629477 NCBI chr12:48,127,149...48,238,969
Ensembl chr12:48,127,149...48,238,887 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) RGD PMID:16814735 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258 		JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056 		JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908 		JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5440401|PMID:22532565), (MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)		 UniProt
RGD		 PMID:21885430 PMID:22532565 PMID:22675471 GO_REF:0000024 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782 		JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO
ISS		 (PMID:25416781)
(MGI:5700285|PMID:25023281)
GO_REF:0000024		 RGD
UniProt		 PMID:25023281 PMID:25416781 GO_REF:0000024 MGI:5700285 NCBI chr 4:183,655,968...183,665,757
Ensembl chr 4:183,656,013...183,665,754 		JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:4867601 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:4867601 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:3027459|PMID:14581480) RGD PMID:14581480 MGI:3027459 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034 		JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) RGD PMID:17828264 MGI:3759354 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) RGD PMID:23840896 NCBI chr19:55,438,409...55,510,652
Ensembl chr19:55,441,572...55,510,460 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:4440406|PMID:20176937)		 Ensembl
RGD		 PMID:20176937 GO_REF:0000107 MGI:4440406 NCBI chr20:29,509,283...29,511,382
Ensembl chr20:29,509,289...29,511,382 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19881551), (PMID:25043030)		 UniProt
Ensembl
RGD		 PMID:19881551 PMID:25043030 GO_REF:0000024 GO_REF:0000107 NCBI chr17:396,175...417,480
Ensembl chr17:396,180...417,480 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6478067|PMID:32460388)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 MGI:6478067 NCBI chr10:62,656,000...62,664,467
Ensembl chr10:62,656,000...62,664,466 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (MGI:4365327|PMID:19109424) RGD PMID:19109424 MGI:4365327 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (MGI:4437986|PMID:19096392) RGD PMID:19096392 MGI:4437986 NCBI chr20:3,438,798...3,440,002
Ensembl chr20:3,438,798...3,440,769 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO MGI:2449949|MGI:5566664 (MGI:5662300|PMID:26219591) RGD PMID:26219591 MGI:5662300 NCBI chr 3:79,678,141...79,695,356
Ensembl chr 3:79,678,201...79,694,006 		JBrowse link
G Myog myogenin IDA RGD PMID:10225962 RGD:9686132 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19955185)		 Ensembl
RGD		 PMID:19955185 GO_REF:0000107 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO
ISS		 (PMID:30451898)
GO_REF:0000024		 RGD
UniProt		 PMID:30451898 GO_REF:0000024 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (PMID:19955185) RGD PMID:19955185 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IMP RGD PMID:22343369 RGD:7242186 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706) RGD PMID:20141841 PMID:23217706 MGI:4881401 MGI:5619441 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within ISO (MGI:5441121|PMID:22891351) RGD PMID:22891351 MGI:5441121 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:4867601|PMID:20935145)		 RGD PMID:20935145, PMID:21873635 MGI:4867601, RGD:13792537 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3820439|PMID:18698006)		 Ensembl
RGD		 PMID:18698006 GO_REF:0000107 MGI:3820439 NCBI chr10:90,296,144...90,312,401
Ensembl chr10:90,296,141...90,312,386 		JBrowse link
negative regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hp haptoglobin involved_in ISO (PMID:19740759) RGD PMID:19740759 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804 		JBrowse link
G Mt3 metallothionein 3 IDA RGD PMID:12058024 RGD:625483 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139 		JBrowse link
negative regulation of lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334) RGD PMID:15677334 MGI:3530688 NCBI chr12:48,127,149...48,238,969
Ensembl chr12:48,127,149...48,238,887 		JBrowse link
G Adora1 adenosine A1 receptor IDA RGD PMID:15220221 RGD:1625243 NCBI chr13:51,042,111...51,076,913
Ensembl chr13:51,042,248...51,076,852 		JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO UniProtKB:P25962 (PMID:10948198) RGD PMID:10948198 NCBI chr 1:274,766,283...274,769,083
Ensembl chr 1:274,766,283...274,769,081 		JBrowse link
G Alk ALK receptor tyrosine kinase involved_in ISO (MGI:6442464|PMID:32442405) RGD PMID:32442405 MGI:6442464 NCBI chr 6:22,696,415...23,203,791
Ensembl chr 6:22,696,397...23,203,775 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802 		JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO
IBA		 (PMID:15576844)
PMID:21873635		 RGD PMID:15576844, PMID:21873635 RGD:13792537 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921 		JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5319118|PMID:22269949)		 UniProt
RGD		 PMID:22269949 GO_REF:0000024 MGI:5319118 NCBI chr 1:225,035,956...225,046,137
Ensembl chr 1:225,037,737...225,046,040 		JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (PMID:15919794)
(MGI:2673116|PMID:12910269)		 RGD PMID:12910269 PMID:15919794 MGI:2673116 NCBI chr18:63,082,861...63,108,450
Ensembl chr18:63,098,144...63,108,051 		JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 acts_upstream_of_or_within ISO MGI:4879976 (MGI:4867567|PMID:21164481) RGD PMID:21164481 MGI:4867567 NCBI chr 1:142,398,248...142,500,562
Ensembl chr 1:142,393,207...142,500,383 		JBrowse link
G Fmc1 formation of mitochondrial complex V assembly factor 1 acts_upstream_of_or_within ISO (MGI:5706869|PMID:25912136) RGD PMID:25912136 MGI:5706869 NCBI chr 4:66,276,835...66,284,868
Ensembl chr 4:66,276,835...66,284,868 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:18465680 RGD:2293508 NCBI chr 4:78,377,228...78,386,683
Ensembl chr 4:78,378,144...78,385,577 		JBrowse link
G Hcar1 hydroxycarboxylic acid receptor 1 involved_in ISO (MGI:3839706|PMID:19047060) RGD PMID:19047060 MGI:3839706 NCBI chr12:38,145,177...38,146,232
Ensembl chr12:38,144,855...38,146,271 		JBrowse link
G Hcar2 hydroxycarboxylic acid receptor 2 involved_in IDA PMID:19141678 UniProt PMID:19141678 RGD:8553927 NCBI chr12:38,160,464...38,161,546
Ensembl chr12:38,160,464...38,161,546 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO
IEA		 (PMID:19032770)
GO_REF:0000107		 RGD
Ensembl		 PMID:19032770 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:24675707) RGD PMID:24675707 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034 		JBrowse link
G LOC100910181 apolipoprotein C-I-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Pde3b phosphodiesterase 3B involved_in IEA
ISO		 GO_REF:0000107
(PMID:11641262)		 Ensembl
RGD		 PMID:11641262 GO_REF:0000107 NCBI chr 1:183,892,841...184,078,071
Ensembl chr 1:183,892,841...184,078,071 		JBrowse link
G Plin1 perilipin 1 involved_in ISO (PMID:21701568) RGD PMID:21701568 NCBI chr 1:141,458,907...141,470,927
Ensembl chr 1:141,458,181...141,471,010 		JBrowse link
G Plin5 perilipin 5 involved_in ISO (MGI:5559666|PMID:21885430) RGD PMID:21885430 MGI:5559666 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5284794|PMID:15878856)		 UniProt
RGD		 PMID:15878856 GO_REF:0000024 MGI:5284794 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:19032770) RGD PMID:19032770 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)		 RGD PMID:22848640 MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA
ISO		 GO_REF:0000107
(PMID:16912035)		 Ensembl
RGD		 PMID:16912035 GO_REF:0000107 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182 		JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO
ISS		 (PMID:25588945)
GO_REF:0000024		 RGD
UniProt		 PMID:25588945 GO_REF:0000024 NCBI chr 7:72,924,911...72,968,099
Ensembl chr 7:72,924,799...72,968,101 		JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISS
ISO		 GO_REF:0000024
MGI:1857830 (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158)		 UniProt
RGD		 PMID:25592972 PMID:26467158 GO_REF:0000024 MGI:5751042 MGI:5816436 NCBI chr 7:121,394,541...121,436,935
Ensembl chr 7:121,408,829...121,435,022 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) RGD PMID:26203154 MGI:5694519 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636 		JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO MGI:2429784 (MGI:5430482|PMID:20705711) RGD PMID:20705711 MGI:5430482 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584 		JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr16:22,250,452...22,306,667
Ensembl chr16:22,250,470...22,306,662 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:25327288)
(MGI:3690270|PMID:16714284), (MGI:5563734|PMID:23274896)
PMID:21873635		 RGD PMID:16714284 PMID:23274896 PMID:25327288, PMID:21873635 MGI:3690270 MGI:5563734, RGD:13792537 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177) RGD PMID:17468177 MGI:3723543 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683 		JBrowse link
G Nrbp2 nuclear receptor binding protein 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 7:117,145,106...117,151,694
Ensembl chr 7:117,145,961...117,151,694 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415 		JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 acts_upstream_of_or_within ISO MGI:4044390 (MGI:5588624|PMID:24797518) RGD PMID:24797518 MGI:5588624 NCBI chr10:65,781,994...65,790,833
Ensembl chr10:65,780,494...65,790,272 		JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:24475161) RGD PMID:24475161 NCBI chr13:73,423,396...73,460,890
Ensembl chr13:73,423,397...73,460,935 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:47,019,326...47,026,465
Ensembl chr10:47,018,974...47,026,465 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145 		JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:24599401 RGD:11568679 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584 		JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:22622177) RGD PMID:22622177 NCBI chr10:107,292,828...107,324,355
Ensembl chr10:107,292,828...107,324,355 		JBrowse link
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892 		JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 involved_in ISO
ISS		 (PMID:18383040)
GO_REF:0000024		 RGD
UniProt		 PMID:18383040 GO_REF:0000024 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392 		JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO (MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:5702499 NCBI chr 2:206,928,708...206,997,915
Ensembl chr 2:206,931,204...206,997,519 		JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 involved_in ISO (PMID:12207026) RGD PMID:12207026 NCBI chr 5:74,248,996...74,368,167
Ensembl chr 5:74,248,996...74,368,186 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in IBA
ISO		 PMID:21873635
(PMID:12714508)		 RGD PMID:12714508, PMID:21873635 RGD:13792537 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(PMID:18383040)		 Ensembl
RGD		 PMID:18383040, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133 		JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,156,948...147,163,467
Ensembl chr 4:147,156,948...147,163,467 		JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23200856)		 UniProt
RGD		 PMID:23200856 GO_REF:0000024 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214 		JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing acts_upstream_of_or_within ISO MGI:1916394|MGI:3857306|MGI:5438913 (MGI:5301479|PMID:21880015), (MGI:5438202|PMID:22045337) RGD PMID:21880015 PMID:22045337 MGI:5301479 MGI:5438202 NCBI chr 6:7,984,043...8,066,874
Ensembl chr 6:7,984,019...8,066,868 		JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1919666 (MGI:5438202|PMID:22045337)		 RGD PMID:22045337, PMID:21873635 MGI:5438202, RGD:13792537 NCBI chr 6:111,476,768...111,486,039
Ensembl chr 6:111,476,768...111,486,039 		JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892 		JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO MGI:1921624 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr 7:2,827,242...2,854,230
Ensembl chr 7:2,827,247...2,852,681 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:48,262,663...48,316,580
Ensembl chr12:48,262,658...48,316,722 		JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25225333)		 Ensembl
RGD		 PMID:25225333 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:78,069,260...78,112,488
Ensembl chr 1:78,090,044...78,112,488 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:38,474,773...38,777,146
Ensembl chr 6:38,474,804...38,777,806 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO
ISS		 (PMID:18447585)
GO_REF:0000024		 RGD
UniProt		 PMID:18447585 GO_REF:0000024 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268 		JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4433050 (MGI:5582859|PMID:24274065)		 Ensembl
RGD		 PMID:24274065 GO_REF:0000107 MGI:5582859 NCBI chr17:13,555,348...13,586,595
Ensembl chr17:13,555,349...13,586,554 		JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
IEA
ISS		 (PMID:18377426)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18377426 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716 		JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:2302419) RGD PMID:2302419 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921 		JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346 		JBrowse link
G F8a1 coagulation factor VIII-associated 1 involved_in ISO
ISS		 (PMID:27815841)
GO_REF:0000024		 RGD
UniProt		 PMID:27815841 GO_REF:0000024 NCBI chr 1:147,021,436...147,022,950
Ensembl chr 1:147,021,436...147,022,950 		JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:44,164,935...44,175,771
Ensembl chr19:44,164,935...44,175,770 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IMP
ISO		 PMID:17517623
(MGI:6148636|PMID:17517623)		 RGD PMID:17517623, PMID:17517623 MGI:6148636, RGD:13514081 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29295817)		 UniProt
RGD		 PMID:29295817 GO_REF:0000024 NCBI chr 3:46,284,961...46,325,230
Ensembl chr 3:46,286,712...46,324,057 		JBrowse link
G Ophn1 oligophrenin 1 involved_in IBA
ISO		 PMID:21873635
(MGI:5303043|PMID:21874017)		 RGD PMID:21874017, PMID:21873635 MGI:5303043, RGD:13792537 NCBI chr  X:68,185,865...68,579,518
Ensembl chr  X:68,189,161...68,563,137 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO		 GO_REF:0000024
(MGI:5467682|PMID:23185022)		 UniProt
RGD		 PMID:23185022 GO_REF:0000024 MGI:5467682 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,827,057...10,856,747
Ensembl chr19:10,827,371...10,856,745 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:10764772)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10764772 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:147,238,111...147,263,275
Ensembl chr 3:147,238,114...147,263,275 		JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5758867 (MGI:5643882|PMID:25683716) RGD PMID:25683716 MGI:5643882 NCBI chr10:53,595,854...53,608,437
Ensembl chr10:53,595,854...53,608,435 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5614537|PMID:25088257)		 Ensembl
RGD		 PMID:25088257 GO_REF:0000107 MGI:5614537 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:136,180,640...136,185,651
Ensembl chr 6:136,182,006...136,185,651 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3808636|PMID:18678708)		 UniProt
RGD		 PMID:18678708 GO_REF:0000024 MGI:3808636 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084 		JBrowse link
G Camlg calcium modulating ligand involved_in ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:9,523,792...9,534,683
Ensembl chr17:9,523,795...9,534,653 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:51,818,887...51,834,443
Ensembl chr15:51,818,897...51,834,030 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in ISO (PMID:32269044) RGD PMID:32269044 NCBI chr 6:10,151,732...10,236,677
Ensembl chr 6:10,151,729...10,236,695
Ensembl chr 6:10,151,729...10,236,695 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO
ISS
IBA		 (PMID:15313915)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:15313915, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:15,697,292...16,862,873 JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in ISO (MGI:3807767|PMID:11546783) RGD PMID:11546783 MGI:3807767 NCBI chr19:24,786,604...24,798,231
Ensembl chr19:24,786,628...24,798,233 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16280321), (PMID:24613385)		 UniProt
RGD		 PMID:16280321 PMID:24613385 GO_REF:0000024 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243 		JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5586592|PMID:24960163)		 RGD PMID:24960163, PMID:21873635 MGI:5586592, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871 		JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186 		JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in IBA
ISO		 PMID:21873635
(MGI:3829128|PMID:17592138)		 RGD PMID:17592138, PMID:21873635 MGI:3829128, RGD:13792537 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO		 GO_REF:0000107
(PMID:26678539)		 Ensembl
RGD		 PMID:26678539 GO_REF:0000107 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
IEA		 (PMID:17015834)
GO_REF:0000107		 RGD
Ensembl		 PMID:17015834 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO MGI:5293435 (MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:5293269 NCBI chr15:42,489,253...42,500,377
Ensembl chr15:42,489,377...42,500,395 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5897550|PMID:21804542)		 UniProt
RGD		 PMID:21804542 GO_REF:0000024 MGI:5897550 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328 		JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,689,623...132,740,823
Ensembl chr 4:132,689,531...132,740,938 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO
ISS		 (PMID:25893292)
GO_REF:0000024		 RGD
UniProt		 PMID:25893292 GO_REF:0000024 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO MGI:3818522 (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 7:139,626,444...139,684,587
Ensembl chr 7:139,630,515...139,675,245
Ensembl chr 7:139,630,515...139,675,245 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3624046|PMID:16611981)		 Ensembl
RGD		 PMID:16611981 GO_REF:0000107 MGI:3624046 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 2:30,664,407...30,668,414
Ensembl chr 2:30,664,639...30,668,414 		JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:93,410,181...93,507,277
Ensembl chr10:93,415,399...93,507,277 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in IBA
ISS
ISO		 PMID:21873635
GO_REF:0000024
(PMID:23213251)		 UniProt
RGD		 PMID:23213251, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:6362140 NCBI chr 8:49,106,374...49,109,981
Ensembl chr 8:49,106,374...49,109,981 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20351172)		 UniProt
RGD		 PMID:20351172 GO_REF:0000024 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:60,568,102...60,603,812
Ensembl chr13:60,545,635...60,603,811 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:26678539) RGD PMID:26678539 NCBI chr10:6,930,462...7,019,910
Ensembl chr10:6,975,244...7,018,930 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:60,887,606...60,946,630
Ensembl chr17:60,888,017...60,946,426 		JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:5643972|PMID:25751059) RGD PMID:25751059 MGI:5643972 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 involved_in ISO (PMID:18374643) RGD PMID:18374643 NCBI chr 7:70,360,199...70,377,422
Ensembl chr 7:70,364,813...70,377,422 		JBrowse link
G Azin1 antizyme inhibitor 1 involved_in IDA
ISS
IBA
ISO
IEA		 downregulates antizyme degradation of ODC
GO_REF:0000024
PMID:21873635
(PMID:17900240)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17900240, PMID:8631929, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:633334, RGD:13792537 NCBI chr 7:77,345,646...77,372,398
Ensembl chr 7:77,345,646...77,372,398 		JBrowse link
G Azin2 antizyme inhibitor 2 involved_in IEA
ISS
IBA
ISO		 GO_REF:0000107
GO_REF:0000024
PMID:21873635
(PMID:17900240)		 Ensembl
UniProt
RGD		 PMID:17900240, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:147,120,128...147,148,576
Ensembl chr 5:147,120,129...147,148,291 		JBrowse link
G Banp Btg3 associated nuclear protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:3579758|PMID:15701641)		 RGD PMID:15701641, PMID:21873635 MGI:3579758, RGD:13792537 NCBI chr19:54,766,441...54,843,795
Ensembl chr19:54,766,589...54,840,569 		JBrowse link
G Cyp51 cytochrome P450, family 51 involved_in ISO (MGI:6270905|PMID:20876579) RGD PMID:20876579 MGI:6270905 NCBI chr 4:27,175,564...27,194,018
Ensembl chr 4:27,175,243...27,194,018 		JBrowse link
G Dedd death effector domain-containing acts_upstream_of_or_within ISO MGI:3707325 (MGI:5000188|PMID:21135503) RGD PMID:21135503 MGI:5000188 NCBI chr13:89,706,932...89,721,825
Ensembl chr13:89,718,066...89,721,454 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (MGI:5433472|PMID:20724702) RGD PMID:20724702 MGI:5433472 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796 		JBrowse link
G Fbxo43 F-box protein 43 acts_upstream_of_or_within ISO (MGI:3663227|PMID:16966421) RGD PMID:16966421 MGI:3663227 NCBI chr 7:74,925,091...74,938,796
Ensembl chr 7:74,925,092...74,938,663 		JBrowse link
G Flna filamin A involved_in ISO (PMID:18322202) RGD PMID:18322202 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:92,569,256...92,887,302 JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:3775717|PMID:16841086) RGD PMID:16841086 MGI:3775717 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95822 (MGI:3054180|PMID:15317856)		 Ensembl
RGD		 PMID:15317856 GO_REF:0000107 MGI:3054180 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95820 (MGI:3054180|PMID:15317856)		 Ensembl
RGD		 PMID:15317856 GO_REF:0000107 MGI:3054180 NCBI chr10:103,798,290...103,816,923
Ensembl chr10:103,798,291...103,816,287 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in ISO (MGI:6270905|PMID:20876579) RGD PMID:20876579 MGI:6270905 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:15185208) RGD PMID:15185208 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034 		JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO (PMID:17379480), (PMID:18156187)
(MGI:3843426|PMID:17379480)		 RGD PMID:17379480 PMID:18156187 MGI:3843426 NCBI chr 7:64,922,830...64,982,224
Ensembl chr 7:64,923,615...64,982,281 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in ISO (PMID:11459825) RGD PMID:11459825 NCBI chr 4:97,530,993...97,543,179
Ensembl chr 4:97,531,083...97,537,086 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO
ISS		 (PMID:11459826)
GO_REF:0000024		 RGD
UniProt		 PMID:11459826 GO_REF:0000024 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255 		JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO (PMID:10608892) RGD PMID:10608892 NCBI chr13:49,786,776...49,828,780
Ensembl chr13:49,792,794...49,828,720 		JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO (MGI:3849342|PMID:19398581) RGD PMID:19398581 MGI:3849342 NCBI chr15:87,405,472...87,450,812
NCBI chr15:93,678,062...93,901,556
Ensembl chr15:87,506,959...93,868,301 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4943392|PMID:18003616)		 Ensembl
RGD		 PMID:18003616 GO_REF:0000107 MGI:4943392 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (MGI:4454957|PMID:20448149) RGD PMID:20448149 MGI:4454957 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (MGI:5575789|PMID:24899725) RGD PMID:24899725 MGI:5575789 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724 		JBrowse link
G Phb prohibitin involved_in ISO (PMID:24732013) RGD PMID:24732013 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878 		JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:11533658) RGD PMID:11533658 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO (PMID:15808853) RGD PMID:15808853 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (MGI:3581324|PMID:15923614) RGD PMID:15923614 MGI:3581324 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249 		JBrowse link
G Rilp Rab interacting lysosomal protein involved_in ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:63,658,451...63,662,428
Ensembl chr10:63,659,085...63,662,050 		JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2387774 (MGI:3521551|PMID:15509762), (MGI:3654805|PMID:16319172)		 Ensembl
RGD		 PMID:15509762 PMID:16319172 GO_REF:0000107 MGI:3521551 MGI:3654805 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO (PMID:23951410) RGD PMID:23951410 NCBI chr19:43,392,071...43,429,582
Ensembl chr19:43,392,085...43,429,580 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:3624046|PMID:16611981) RGD PMID:16611981 MGI:3624046 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
IEA
ISS		 (PMID:20543840)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20543840 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952 		JBrowse link
G Smad3 SMAD family member 3 involved_in IDA
IMP		 PMID:16690606
PMID:20097766		 CACAO
BHF-UCL		 PMID:16690606, PMID:20097766 RGD:15023472, RGD:11079190 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199 		JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:70,989,822...71,127,330
Ensembl chr  X:70,989,822...71,127,278 		JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390 		JBrowse link
G Trim40 tripartite motif-containing 40 involved_in ISO (PMID:21474709) RGD PMID:21474709 NCBI chr20:2,169,674...2,178,477
Ensembl chr20:2,169,545...2,178,601 		JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within		 ISO UniProtKB:Q9BXM7 (PMID:25217637)
(MGI:5468878|PMID:23277542)		 RGD PMID:23277542 PMID:25217637 MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175 		JBrowse link
G Efna1 ephrin A1 involved_in ISO UniProtKB:P54764 (PMID:24217950) RGD PMID:24217950 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISO UniProtKB:P20827 (PMID:24217950) RGD PMID:24217950 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458 		JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:12,283,471...12,334,014
Ensembl chr 8:12,284,528...12,333,316 		JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein involved_in IBA
ISO		 PMID:21873635
(PMID:28007894)		 RGD PMID:28007894, PMID:21873635 RGD:13792537 NCBI chr15:19,690,079...19,720,683
Ensembl chr15:19,690,194...19,717,774 		JBrowse link
negative regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 involved_in ISO
IBA		 (PMID:18635818), (PMID:3973011)
PMID:21873635		 RGD PMID:3973011 PMID:18635818, PMID:21873635 RGD:13792537 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3617276|PMID:16219662)		 UniProt
RGD		 PMID:16219662 GO_REF:0000024 MGI:3617276 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma IMP RGD PMID:21435395 RGD:6482711 NCBI chr 6:51,465,696...51,501,234
Ensembl chr 6:51,465,908...51,498,337 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5476606|PMID:23345411), (MGI:5559662|PMID:22675471)		 UniProt
RGD		 PMID:22675471 PMID:23345411 GO_REF:0000024 MGI:5476606 MGI:5559662 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (MGI:5811185|PMID:27322061) RGD PMID:27322061 MGI:5811185 NCBI chr 8:46,228,077...46,287,171 JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (MGI:4461099|PMID:20100865) RGD PMID:20100865 MGI:4461099 NCBI chr20:7,484,550...7,636,498
Ensembl chr20:7,484,550...7,636,497 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within		 ISO (PMID:16173922)
(MGI:5468878|PMID:23277542)
(PMID:18560357)		 RGD PMID:16173922 PMID:18560357 PMID:23277542 MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Pdcl3 phosducin-like 3 involved_in ISO (PMID:23792958) RGD PMID:23792958 NCBI chr 9:45,672,257...45,680,728
Ensembl chr 9:45,672,157...45,680,799 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)		 RGD PMID:30683861 MGI:6277293 NCBI chr10:105,397,470...105,422,811
Ensembl chr10:105,399,814...105,412,627 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:2,860,963...2,867,397
Ensembl chr14:2,860,965...2,867,397 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:47,899,525...47,904,389
Ensembl chr 6:47,899,525...47,904,437 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:23129660)		 UniProt
RGD		 PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:1343085 (MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:3628833 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS		 (PMID:18218628)
GO_REF:0000024		 RGD
UniProt		 PMID:18218628 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838 		JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:26001795) RGD PMID:26001795 NCBI chr17:63,236,007...63,317,298
Ensembl chr17:63,265,407...63,314,019 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876 		JBrowse link
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812 		JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO (MGI:5816163|PMID:27510903) RGD PMID:27510903 MGI:5816163 NCBI chr16:24,582,000...24,612,773
Ensembl chr16:24,578,678...24,612,732 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISO
ISS		 (PMID:23200856)
GO_REF:0000024		 RGD
UniProt		 PMID:23200856 GO_REF:0000024 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214 		JBrowse link
G Zcchc17 zinc finger CCHC-type containing 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:148,535,519...148,577,315
Ensembl chr 5:148,535,519...148,577,292 		JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISO (PMID:23290079) RGD PMID:23290079 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:22238380) RGD PMID:22238380 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:25467444), (PMID:26950371) RGD PMID:25467444 PMID:26950371 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475 		JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27510903)		 Ensembl
RGD		 PMID:27510903 GO_REF:0000107 NCBI chr16:24,582,000...24,612,773
Ensembl chr16:24,578,678...24,612,732 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:26482878), (PMID:26950371) RGD PMID:26482878 PMID:26950371 NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269 		JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO (MGI:6194005|PMID:22885326) RGD PMID:22885326 MGI:6194005 NCBI chr 1:36,295,650...36,319,906
Ensembl chr 1:36,295,650...36,319,966 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6194005|PMID:22885326)		 UniProt
RGD		 PMID:22885326 GO_REF:0000024 MGI:6194005 NCBI chr17:80,824,652...80,859,585
Ensembl chr17:80,826,846...80,860,195 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19633
    metabolic process 11911
      catabolic process 2541
        negative regulation of catabolic process 323
          negative regulation of anthocyanin catabolic process 0
          negative regulation of cellodextrin catabolic process 0
          negative regulation of cellooligosaccharide catabolic process 0
          negative regulation of cellotriose catabolic process 0
          negative regulation of cellular catabolic process + 256
          negative regulation of collagen catabolic process 1
          negative regulation of cyclodextrin catabolic process 0
          negative regulation of galactoglucomannan catabolic process 0
          negative regulation of galactomannan catabolic process 0
          negative regulation of glucomannan catabolic process 0
          negative regulation of glucose catabolic process to lactate via pyruvate 3
          negative regulation of glycolytic process + 17
          negative regulation of lipid catabolic process + 30
          negative regulation of pectin catabolic process 0
          negative regulation of pentose catabolic process to ethanol + 0
          negative regulation of prostaglandin catabolic process 0
          negative regulation of protein catabolic process + 126
Path 2
Term Annotations click to browse term
  biological_process 19633
    biological regulation 13611
      regulation of biological process 12859
        regulation of metabolic process 6825
          negative regulation of metabolic process 3237
            negative regulation of catabolic process 323
              negative regulation of anthocyanin catabolic process 0
              negative regulation of cellodextrin catabolic process 0
              negative regulation of cellooligosaccharide catabolic process 0
              negative regulation of cellotriose catabolic process 0
              negative regulation of cellular catabolic process + 256
              negative regulation of collagen catabolic process 1
              negative regulation of cyclodextrin catabolic process 0
              negative regulation of galactoglucomannan catabolic process 0
              negative regulation of galactomannan catabolic process 0
              negative regulation of glucomannan catabolic process 0
              negative regulation of glucose catabolic process to lactate via pyruvate 3
              negative regulation of glycolytic process + 17
              negative regulation of lipid catabolic process + 30
              negative regulation of pectin catabolic process 0
              negative regulation of pentose catabolic process to ethanol + 0
              negative regulation of prostaglandin catabolic process 0
              negative regulation of protein catabolic process + 126
paths to the root