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ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of catabolic process
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Accession:GO:0009895 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.
Synonyms:exact_synonym: down regulation of catabolic process;   downregulation of catabolic process;   negative regulation of breakdown;   negative regulation of catabolism;   negative regulation of degradation
 narrow_synonym: inhibition of catabolic process


show annotations for term's descendants           Sort by:
negative regulation of catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zinc finger DHHC-type palmitoyltransferase 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25301068)		 UniProt
Ensembl
RGD		 PMID:25301068 GO_REF:0000024 GO_REF:0000107 NCBI chr19:48,139,309...48,156,673
Ensembl chr19:48,139,527...48,156,673 		JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA		 (PMID:22547059)
GO_REF:0000033		 RGD
GO_Central		 PMID:22547059 GO_REF:0000033 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493 		JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916 		JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:10,695,593...10,712,330
Ensembl chr 9:10,695,592...10,712,323 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)		 UniProt
RGD		 PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 MGI:6105829 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS		 (PMID:12034726)
GO_REF:0000024		 RGD
UniProt		 PMID:12034726 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:5306322 NCBI chr17:6,507,728...6,510,385
Ensembl chr17:6,507,275...6,509,375 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19508861)		 Ensembl
RGD		 PMID:19508861 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(MGI:6859910|PMID:29844590)		 RGD PMID:29844590 PMID:34160127 MGI:6859910 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS		 (PMID:15014438)
GO_REF:0000024		 RGD
UniProt		 PMID:15014438 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO		 GO_REF:0000107
GO_REF:0000118
(PMID:19029303)		 Ensembl
TreeGrafter
RGD		 PMID:19029303 GO_REF:0000107 GO_REF:0000118 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19029303), (PMID:29476152)		 UniProt
GO_Central
RGD		 PMID:19029303 PMID:29476152 GO_REF:0000024 GO_REF:0000033 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IBA		 (PMID:29476152)
GO_REF:0000033		 RGD
GO_Central		 PMID:29476152 GO_REF:0000033 NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377 		JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IBA		 (PMID:29476152)
GO_REF:0000033		 RGD
GO_Central		 PMID:29476152 GO_REF:0000033 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865 		JBrowse link
G LOC100364335 cold shock domain-containing protein E1-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:78,477,560...78,481,251 JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
IEA		 (PMID:11051545), (PMID:19029303)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:11051545 PMID:19029303 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19029303)		 UniProt
Ensembl
RGD		 PMID:19029303 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (PMID:15480992) RGD PMID:15480992 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Axin2 axin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17072303)		 Ensembl
RGD		 PMID:17072303 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:11574538)		 UniProt
RGD		 PMID:11574538 GO_REF:0000024 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22844247) RGD PMID:22844247 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO
IEA		 (PMID:15766563)
GO_REF:0000107		 RGD
Ensembl		 PMID:15766563 GO_REF:0000107 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285 PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(PMID:19029303), (PMID:31358969)
(MGI:5559905|PMID:24394384), (MGI:5922838|PMID:27609837)		 UniProt
RGD		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... GO_REF:0000024 MGI:5559905 MGI:5922838 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G ENSRNOG00000066668 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr  X:31,590,108...31,590,900 JBrowse link
G Fus Fus RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO
IEA
ISS		 (PMID:12358785)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO MGI:3707541 (PMID:21822257) RGD PMID:21822257 NCBI chr13:42,712,154...42,738,470
Ensembl chr13:42,712,159...42,737,143 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091 PMID:28673543 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371 		JBrowse link
G Larp1bl La ribonucleoprotein 1B like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:123,969,408...124,031,645
Ensembl chr 2:124,008,367...124,030,654 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO MGI:2179724 (PMID:11741878) RGD PMID:11741878 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO
IBA		 (MGI:5770021|PMID:26742488)
GO_REF:0000033		 RGD
GO_Central		 PMID:26742488 GO_REF:0000033 MGI:5770021 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:29290617) RGD PMID:29290617 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Noct nocturnin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5308514|PMID:22073225)		 UniProt
RGD		 PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IMP
ISO		 (MGI:7539456|PMID:32732889)
(PMID:32732889)		 RGD PMID:32732889 PMID:16855020 MGI:7539456, RGD:10045995 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm10 RNA binding motif protein 10 IMP RGD PMID:19508861 RGD:151667451 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
IEA		 (PMID:29104163)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:29104163 GO_REF:0000033 GO_REF:0000118 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) RGD PMID:25397698 NCBI chr 2:168,198,324...168,242,011
Ensembl chr 2:168,198,463...168,242,011 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857755 (PMID:9009318)		 Ensembl
RGD		 PMID:9009318 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:68,272,921...68,304,951
Ensembl chr10:68,272,969...68,304,949 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045 		JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:145,695,358...145,702,668
Ensembl chr 5:145,695,362...145,706,073 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO
IBA
IEA
ISS		 (PMID:28931820)
GO_REF:0000033
GO_REF:0000107
(MGI:5926094|PMID:28931820)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:28931820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5926094 NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744 		JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,901,287...72,974,562
Ensembl chr  X:72,901,241...72,970,573 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS		 (PMID:18794151)
GO_REF:0000024		 RGD
UniProt		 PMID:18794151 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538 		JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO (PMID:17785852), (PMID:21822258) RGD PMID:17785852 PMID:21822258 NCBI chr20:43,011,405...43,054,654
Ensembl chr20:43,011,450...43,054,667 		JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr13:103,569,944...103,618,747
Ensembl chr13:103,572,314...103,618,709 		JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vip vasoactive intestinal peptide involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31358969)		 UniProt
RGD		 PMID:31358969 GO_REF:0000024 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
G Ybx2 Y box binding protein 2 acts_upstream_of_or_within ISO MGI:3576937 (PMID:17035640) RGD PMID:17035640 NCBI chr10:54,659,719...54,665,371
Ensembl chr10:54,659,719...54,665,371 		JBrowse link
G Zar1 zygote arrest 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36264786)		 UniProt
RGD		 PMID:36264786 GO_REF:0000024 NCBI chr14:35,193,446...35,197,382
Ensembl chr14:35,193,446...35,197,382 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6384430|PMID:31868295)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:31868295 GO_REF:0000024 GO_REF:0000107 MGI:6384430 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
negative regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 involved_in IEA
ISO		 GO_REF:0000107
(PMID:31857589)		 Ensembl
RGD		 PMID:31857589 GO_REF:0000107 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Lypla1 lysophospholipase 1 involved_in ISO (PMID:37802024) RGD PMID:37802024 NCBI chr 5:14,679,605...14,708,774
Ensembl chr 5:14,679,606...14,708,746 		JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dffa DNA fragmentation factor subunit alpha acts_upstream_of_or_within
involved_in		 ISO (PMID:15572351)
MGI:2179456 (PMID:10601318), (PMID:14663139)
(PMID:11371636)		 RGD PMID:10601318 PMID:11371636 PMID:14663139 PMID:15572351 NCBI chr 5:159,540,715...159,553,639
Ensembl chr 5:159,540,715...159,553,633 		JBrowse link
G Dffb DNA fragmentation factor subunit beta involved_in ISO
IEA		 (PMID:11371636)
GO_REF:0000107		 RGD
Ensembl		 PMID:11371636 GO_REF:0000107 NCBI chr 5:164,522,446...164,534,733
Ensembl chr 5:164,522,463...164,534,628 		JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:28433754) RGD PMID:28433754 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IMP RGD PMID:27184051 RGD:13781945 NCBI chr 5:159,910,242...159,928,201
Ensembl chr 5:159,910,242...159,928,180 		JBrowse link
G Pam16 presequence translocase associated motor 16 IDA RGD PMID:24069394 RGD:13462066 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 acts_upstream_of_or_within ISO MGI:2683833 (PMID:27994061) RGD PMID:27994061 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (PMID:23918802) RGD PMID:23918802 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547 		JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 involved_in ISO
ISS		 (PMID:25495476)
GO_REF:0000024		 RGD
GO_Central		 PMID:25495476 GO_REF:0000024 NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683 		JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25495476)		 GO_Central
Ensembl
RGD		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:16,654,572...16,694,628
Ensembl chr 6:16,654,614...16,694,626 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:23916833) RGD PMID:23916833 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
MGI:2450997 (PMID:23695157)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:23695157 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:488,923...506,882
Ensembl chr 6:488,969...506,860 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO		 GO_REF:0000024
(PMID:20181828)		 UniProt
RGD		 PMID:20181828 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
IEA
ISS		 (PMID:25484098)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:25484098 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:54,718,663...54,722,784
Ensembl chr10:54,717,724...54,722,782 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS		 (PMID:31806350)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:31806350 GO_REF:0000024 GO_REF:0000033 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964 		JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IEA
IBA
ISS		 (PMID:25484098)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:25484098 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:54,718,663...54,722,784
Ensembl chr10:54,717,724...54,722,782 		JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO
IBA		 (PMID:21062745)
GO_REF:0000033		 RGD
GO_Central		 PMID:21062745 GO_REF:0000033 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS		 (PMID:31806350)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:31806350 GO_REF:0000024 GO_REF:0000033 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27994061)		 Ensembl
RGD		 PMID:27994061 GO_REF:0000107 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:18387192)
GO_REF:0000107		 RGD
Ensembl		 PMID:18387192 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in ISO
IEA
ISS		 (PMID:21358617)
(MGI:3796473|PMID:18281291), (PMID:36812915)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18281291 PMID:21358617 PMID:36812915 GO_REF:0000024 GO_REF:0000107 MGI:3796473 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Becn1 beclin 1 acts_upstream_of_or_within ISO (PMID:27994061) RGD PMID:27994061 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO
IEA
IBA		 (PMID:23629966)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
(MGI:5490676|PMID:23629966)		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:23629966 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5490676 NCBI chr 3:105,499,534...105,520,159
Ensembl chr 3:105,499,538...105,520,145 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:29164996)		 UniProt
RGD		 PMID:29164996 GO_REF:0000024 NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017 		JBrowse link
G Dap death-associated protein involved_in ISO
IEA
IBA		 (PMID:20537536)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:20537536 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752 		JBrowse link
G Dapl1 death associated protein-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:43,960,993...43,980,940
Ensembl chr 3:43,960,810...43,980,940 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941 		JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588 		JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 5:150,197,410...150,418,862
Ensembl chr 5:150,195,226...150,418,363 		JBrowse link
G ENSRNOG00000063234 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr15:17,205,053...17,206,176 JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:32561715) RGD PMID:32561715 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Erfe erythroferrone involved_in ISS
ISO		 GO_REF:0000024
(MGI:5554964|PMID:24187137)		 UniProt
RGD		 PMID:24187137 GO_REF:0000024 MGI:5554964 NCBI chr 9:91,956,971...91,964,846
Ensembl chr 9:91,956,977...91,964,846 		JBrowse link
G Foxk1 forkhead box K1 involved_in ISO (PMID:25402684) RGD PMID:25402684 NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089 		JBrowse link
G Foxk2 forkhead box K2 involved_in ISO (MGI:5615527|PMID:25402684) RGD PMID:25402684 MGI:5615527 NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563 		JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:19901028 RGD:5131537 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Golga2 golgin A2 involved_in ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (PMID:20041218) RGD PMID:20041218 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312 		JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313 		JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061 		JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (PMID:15680329) RGD PMID:15680329 NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066 		JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501 		JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29769719)		 UniProt
RGD		 PMID:29769719 GO_REF:0000024 NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770 		JBrowse link
G Lep leptin involved_in ISO
ISS		 (PMID:25060689)
(MGI:5705211|PMID:25060689)
GO_REF:0000024		 RGD
UniProt		 PMID:25060689 GO_REF:0000024 MGI:5705211 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Lepr leptin receptor involved_in ISO
IEA
ISS		 (PMID:25060689)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25060689 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303 		JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996 		JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:26296645) RGD PMID:26296645 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270 		JBrowse link
G Mtmr9 myotubularin related protein 9 involved_in ISO
IBA		 UniProtKB:Q96EF0-1 (PMID:22647598)
GO_REF:0000033		 RGD
GO_Central		 PMID:22647598 GO_REF:0000033 NCBI chr15:37,769,161...37,791,195
Ensembl chr15:37,769,078...37,791,244 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IMP
IEA
ISO
ISS		 GO_REF:0000117
(PMID:22424946), (PMID:22576015), (PMID:30704899), (PMID:32561715)
(MGI:5285135|PMID:21258367)
GO_REF:0000024		 UniProt
RGD		 PMID:21258367 PMID:22424946 PMID:22576015 PMID:30704899 PMID:32561715 More... GO_REF:0000024 GO_REF:0000117 MGI:5285135, RGD:10040964 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IMP RGD PMID:26601421 RGD:13781888 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
IMP		 GO_REF:0000024
(MGI:6283395|PMID:20181828)
(PMID:20181828)		 UniProt
RGD		 PMID:20181828 PMID:20181828 GO_REF:0000024 MGI:6283395, RGD:14390062 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:27994061) RGD PMID:27994061 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783 		JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779 		JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:96,097,135...96,109,564
Ensembl chr 1:96,091,074...96,109,562 		JBrowse link
G Rnf5 ring finger protein 5 acts_upstream_of_or_within ISO MGI:3775796 (PMID:23093945) RGD PMID:23093945 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985 		JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in ISO (PMID:32561715) RGD PMID:32561715 NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983 		JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
IBA
IEA
ISS		 (PMID:25936802)
GO_REF:0000033
(MGI:5473730|PMID:23263183)
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:23263183 PMID:25936802 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5473730 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510 		JBrowse link
G RragB Ras-related GTP binding B involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:18,184,619...18,234,639
Ensembl chr  X:18,184,992...18,234,639 		JBrowse link
G Rragc Ras-related GTP binding C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767 		JBrowse link
G Rragd Ras-related GTP binding D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356 		JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO (PMID:19270696) RGD PMID:19270696 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20543840)		 UniProt
Ensembl
RGD		 PMID:20543840 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 IMP RGD PMID:25049270 RGD:151361107 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO
IEA		 (PMID:26962683)
GO_REF:0000107		 RGD
Ensembl		 PMID:26962683 GO_REF:0000107 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Stk38l serine/threonine kinase 38 like involved_in ISO (PMID:35670107) RGD PMID:35670107 NCBI chr 4:179,616,288...179,693,177
Ensembl chr 4:179,634,275...179,690,983 		JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in IEA
ISO		 GO_REF:0000107
(PMID:22613832)		 Ensembl
RGD		 PMID:22613832 GO_REF:0000107 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:5906931 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO (PMID:35670107) RGD PMID:35670107 NCBI chr17:43,538,282...43,550,633
Ensembl chr17:43,538,285...43,550,643 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:30902965) RGD PMID:30902965 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (MGI:5519172|PMID:23974797) RGD PMID:23974797 MGI:5519172 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009 		JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISO
IEA		 (PMID:22354037)
GO_REF:0000107		 RGD
Ensembl		 PMID:22354037 GO_REF:0000107 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:27911840)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:27911840 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:153,128,334...153,253,905
Ensembl chr 4:153,128,334...153,253,905 		JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 involved_in ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:43,217,168...43,232,828
Ensembl chr17:43,217,222...43,232,827 		JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO UniProtKB:P10619 (PMID:12505983)
(MGI:5700310|PMID:12505983)		 RGD PMID:12505983 MGI:5700310 NCBI chr 3:153,569,106...153,574,983
Ensembl chr 3:153,568,381...153,576,215 		JBrowse link
G Snca synuclein alpha involved_in ISO
IEA		 (PMID:20697033)
GO_REF:0000107		 RGD
Ensembl		 PMID:20697033 GO_REF:0000107 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
negative regulation of collagen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rgn regucalcin IDA RGD PMID:2001740 RGD:9590215 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3813160|PMID:18606867)		 UniProt
RGD		 PMID:18606867 GO_REF:0000024 MGI:3813160 NCBI chr 1:152,046,515...152,056,675
Ensembl chr 1:152,046,517...152,056,725 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:23129660)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23129660 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458 		JBrowse link
G Svip small VCP interacting protein involved_in IDA
IBA
ISO
IEA		 PMID:17000876
GO_REF:0000033
(PMID:17872946)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:17872946 PMID:17000876 GO_REF:0000033 GO_REF:0000107, RGD:10047192 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:205,765,309...205,769,234
Ensembl chr 1:205,745,120...205,816,520 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in ISS
ISO		 GO_REF:0000024
(PMID:26265139)		 UniProt
RGD		 PMID:26265139 GO_REF:0000024 NCBI chr 6:27,884,364...27,912,767
Ensembl chr 6:27,884,680...27,912,649
Ensembl chr20:27,884,680...27,912,649 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:15,603,654...15,711,356
Ensembl chr11:15,603,881...15,711,348 		JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334), (MGI:3629477|PMID:12920182) RGD PMID:12920182 PMID:15677334 MGI:3530688 MGI:3629477 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099 		JBrowse link
G Dbi diazepam binding inhibitor IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Pink1 PTEN induced kinase 1 HMP RGD PMID:25421206 RGD:11560775 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5440401|PMID:22532565), (MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)		 UniProt
RGD		 PMID:21885430 PMID:22532565 PMID:22675471 GO_REF:0000024 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120 		JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO
ISS		 (PMID:25416781)
(MGI:5700285|PMID:25023281)
GO_REF:0000024		 RGD
UniProt		 PMID:25023281 PMID:25416781 GO_REF:0000024 MGI:5700285 NCBI chr 4:182,140,492...182,204,635
Ensembl chr 4:182,140,559...182,150,305 		JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:56,097,166...56,191,841
Ensembl chr 3:56,097,269...56,192,100 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (PMID:20935145) RGD PMID:20935145 NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20935145)		 Ensembl
RGD		 PMID:20935145 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (PMID:14581480) RGD PMID:14581480 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) RGD PMID:17828264 MGI:3759354 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) RGD PMID:23840896 NCBI chr19:50,679,897...50,750,028
Ensembl chr19:50,680,729...50,749,610 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20176937)		 Ensembl
RGD		 PMID:20176937 GO_REF:0000107 NCBI chr20:27,891,989...27,894,088
Ensembl chr20:27,891,998...27,894,105 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19881551), (PMID:25043030)		 UniProt
Ensembl
RGD		 PMID:19881551 PMID:25043030 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,207,271...2,230,076
Ensembl chr17:2,208,031...2,230,071 		JBrowse link
G Flcn folliculin involved_in ISO (PMID:34381247) RGD PMID:34381247 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6478067|PMID:32460388)		 UniProt
Ensembl
RGD		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 MGI:6478067 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO
IEA		 (MGI:4365327|PMID:19109424)
GO_REF:0000107		 RGD
Ensembl		 PMID:19109424 GO_REF:0000107 MGI:4365327 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (PMID:19096392) RGD PMID:19096392 NCBI chr20:2,928,378...2,929,582
Ensembl chr20:2,928,378...2,929,583 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO MGI:2449949|MGI:5566664 (PMID:26219591) RGD PMID:26219591 NCBI chr 3:76,830,549...76,850,189
Ensembl chr 3:76,830,413...76,850,189 		JBrowse link
G Myog myogenin IDA RGD PMID:10225962 RGD:9686132 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO
IEA		 (PMID:19955185)
GO_REF:0000107		 RGD
Ensembl		 PMID:19955185 GO_REF:0000107 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO
ISS		 (PMID:30451898)
GO_REF:0000024		 RGD
UniProt		 PMID:30451898 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (PMID:19955185) RGD PMID:19955185 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IMP RGD PMID:22343369 RGD:7242186 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Sik2 salt-inducible kinase 2 involved_in ISO (PMID:21084751) RGD PMID:21084751 NCBI chr 8:51,225,543...51,325,343
Ensembl chr 8:51,225,543...51,325,415 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706)
(PMID:26456828)		 RGD PMID:20141841 PMID:23217706 PMID:26456828 MGI:4881401 MGI:5619441 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22891351)		 Ensembl
RGD		 PMID:22891351 GO_REF:0000107 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (PMID:20935145) RGD PMID:20935145 NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029 		JBrowse link
G Trim63 tripartite motif containing 63 involved_in ISO (PMID:34244144) RGD PMID:34244144 NCBI chr 5:146,533,492...146,547,332
Ensembl chr 5:146,533,507...146,547,322 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in ISO MGI:97592 (PMID:15331593), (PMID:16155866) RGD PMID:15331593 PMID:16155866 NCBI chr  X:19,508,522...19,562,165
Ensembl chr  X:19,508,546...19,562,182 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in ISO MGI:4950915 (PMID:32192773) RGD PMID:32192773 NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA
ISO		 GO_REF:0000107
MGI:3610390 (PMID:16155866), (PMID:23292513)		 Ensembl
RGD		 PMID:16155866 PMID:23292513 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18698006)		 Ensembl
RGD		 PMID:18698006 GO_REF:0000107 NCBI chr10:87,306,865...87,323,132
Ensembl chr10:87,306,872...87,323,117 		JBrowse link
negative regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hp haptoglobin involved_in ISO (PMID:19740759) RGD PMID:19740759 NCBI chr19:37,539,626...37,544,178
Ensembl chr19:37,539,627...37,544,523 		JBrowse link
G Mt3 metallothionein 3 IDA RGD PMID:12058024 RGD:625483 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158 		JBrowse link
negative regulation of lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334) RGD PMID:15677334 MGI:3530688 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655 		JBrowse link
G Adora1 adenosine A1 receptor IDA RGD PMID:15220221 RGD:1625243 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO UniProtKB:P25962 (PMID:10948198) RGD PMID:10948198 NCBI chr 1:253,061,480...253,064,280
Ensembl chr 1:253,060,218...253,064,365 		JBrowse link
G Alk ALK receptor tyrosine kinase involved_in ISO (MGI:6442464|PMID:32442405) RGD PMID:32442405 MGI:6442464 NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034 		JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO
IEA
IBA		 (PMID:15576844)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:15576844 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375 		JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO
ISS		 (MGI:5319118|PMID:22269949)
GO_REF:0000024		 RGD
UniProt		 PMID:22269949 GO_REF:0000024 MGI:5319118 NCBI chr 1:205,731,828...205,743,430
Ensembl chr 1:205,733,872...205,743,421 		JBrowse link
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (MGI:2673116|PMID:12910269)
(PMID:15919794), (PMID:26118629)		 RGD PMID:12910269 PMID:15919794 PMID:26118629 MGI:2673116 NCBI chr18:60,894,917...60,920,485
Ensembl chr18:60,894,874...60,920,481 		JBrowse link
G Cidec cell death-inducing DFFA-like effector c involved_in ISO
IEA
ISS		 (PMID:18334488), (PMID:23399566)
GO_REF:0000107
(MGI:5300632|PMID:22144693), (MGI:6209937|PMID:23481402)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18334488 PMID:22144693 PMID:23399566 PMID:23481402 GO_REF:0000024 GO_REF:0000107 MGI:5300632 MGI:6209937 NCBI chr 4:146,569,288...146,582,173
Ensembl chr 4:146,569,289...146,582,173 		JBrowse link
G Crtc3 CREB regulated transcription coactivator 3 acts_upstream_of_or_within ISO MGI:4879976 (PMID:21164481) RGD PMID:21164481 NCBI chr 1:134,552,830...134,655,929
Ensembl chr 1:134,554,696...134,655,500 		JBrowse link
G Endou endonuclease, poly(U)-specific involved_in ISO FB:FBgn0030251 (PMID:37803019) RGD PMID:37803019 NCBI chr 7:128,844,872...128,866,572
Ensembl chr 7:128,844,862...128,866,596 		JBrowse link
G Fmc1 formation of mitochondrial complex V assembly factor 1 acts_upstream_of_or_within ISO (PMID:25912136) RGD PMID:25912136 NCBI chr 4:67,274,104...67,282,140
Ensembl chr 4:67,274,104...67,282,140 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 IMP RGD PMID:18465680 RGD:2293508 NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086 		JBrowse link
G Hcar1 hydroxycarboxylic acid receptor 1 involved_in ISO (PMID:19047060) RGD PMID:19047060 NCBI chr12:32,710,680...32,713,934
Ensembl chr12:32,711,027...32,712,082 		JBrowse link
G Hcar2 hydroxycarboxylic acid receptor 2 involved_in IDA PMID:19141678 UniProt PMID:19141678 RGD:8553927 NCBI chr12:32,726,252...32,728,238
Ensembl chr12:32,726,184...32,728,504 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:19032770) RGD PMID:19032770 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:24675707) RGD PMID:24675707 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Pde3b phosphodiesterase 3B involved_in IEA
ISO		 GO_REF:0000107
(PMID:11641262)		 Ensembl
RGD		 PMID:11641262 GO_REF:0000107 NCBI chr 1:168,606,762...168,770,078
Ensembl chr 1:168,607,022...168,769,334 		JBrowse link
G Plin1 perilipin 1 involved_in ISO (PMID:21701568) RGD PMID:21701568 NCBI chr 1:133,664,294...133,676,854
Ensembl chr 1:133,664,892...133,676,828 		JBrowse link
G Plin5 perilipin 5 involved_in ISO (MGI:5559666|PMID:21885430) RGD PMID:21885430 MGI:5559666 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5284794|PMID:15878856)		 UniProt
RGD		 PMID:15878856 GO_REF:0000024 MGI:5284794 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:19032770) RGD PMID:19032770 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO
IEA		 (PMID:22848640)
GO_REF:0000107
(MGI:5446858|PMID:22848640)		 RGD
Ensembl		 PMID:22848640 GO_REF:0000107 MGI:5446858 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA		 (PMID:16912035)
GO_REF:0000107		 RGD
Ensembl		 PMID:16912035 GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314 		JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO
IEA
ISS		 (PMID:25588945)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25588945 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,434,525...65,477,386
Ensembl chr 7:65,434,394...65,477,383 		JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISS
ISO		 GO_REF:0000024
MGI:1857830 (PMID:25592972), (PMID:26467158)		 UniProt
RGD		 PMID:25592972 PMID:26467158 GO_REF:0000024 NCBI chr 7:111,708,353...111,761,825
Ensembl chr 7:111,675,730...111,762,026 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO (PMID:27444016) RGD PMID:27444016 NCBI chr 3:113,962,136...114,009,683
Ensembl chr 3:113,962,164...114,009,666 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) RGD PMID:26203154 MGI:5694519 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618 		JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429784 (PMID:20705711)		 Ensembl
RGD		 PMID:20705711 GO_REF:0000107 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203 		JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:25327288)
(PMID:16714284), (PMID:23274896)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:16714284 PMID:23274896 PMID:25327288 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO MGI:1857409|MGI:1891828 (PMID:17468177) RGD PMID:17468177 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049 		JBrowse link
G Nrbp2 nuclear receptor binding protein 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 7:107,798,642...107,805,225
Ensembl chr 7:107,799,497...107,805,230 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 acts_upstream_of_or_within ISO MGI:4044390 (PMID:24797518) RGD PMID:24797518 NCBI chr10:63,407,237...63,417,605
Ensembl chr10:63,407,213...63,417,605 		JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:24475161) RGD PMID:24475161 NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674 		JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:24599401 RGD:11568679 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951 		JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:22622177) RGD PMID:22622177 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877 		JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep295nl CEP295 N-terminal like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:103,562,190...103,581,183
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Il10 interleukin 10 involved_in ISO
ISS		 (PMID:18383040)
GO_REF:0000024		 RGD
UniProt		 PMID:18383040 GO_REF:0000024 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313 		JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 acts_upstream_of_or_within ISO (PMID:26651291) RGD PMID:26651291 NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579 		JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 involved_in ISO (PMID:12207026) RGD PMID:12207026 NCBI chr 5:71,908,520...72,027,323
Ensembl chr 5:71,911,135...72,065,443 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO
IBA		 (PMID:12714508)
GO_REF:0000033		 RGD
GO_Central		 PMID:12714508 GO_REF:0000033 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in ISO
IBA
IEA		 (PMID:18383040)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:18383040 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839 		JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:148,306,021...148,312,558
Ensembl chr 4:148,304,490...148,312,558 		JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO		 GO_REF:0000024
(PMID:31792053)		 UniProt
RGD		 PMID:31792053 GO_REF:0000024 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23200856), (PMID:31792053)		 UniProt
Ensembl
RGD		 PMID:23200856 PMID:31792053 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099 		JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1916394|MGI:3857306|MGI:5438913 (PMID:21880015), (PMID:22045337)		 Ensembl
RGD		 PMID:21880015 PMID:22045337 GO_REF:0000107 NCBI chr 6:9,859,816...9,942,294
Ensembl chr 6:9,859,867...9,942,293 		JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within ISO MGI:1919666 (PMID:22045337) RGD PMID:22045337 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791 		JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (PMID:24949970) RGD PMID:24949970 NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO MGI:1921624 (PMID:24949970) RGD PMID:24949970 NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (PMID:22044588) RGD PMID:22044588 NCBI chr 4:159,927,136...159,946,077
Ensembl chr 4:159,927,139...159,946,029 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857263 (PMID:22044588)		 Ensembl
RGD		 PMID:22044588 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tspo translocator protein involved_in ISO (MGI:5689082|PMID:25470454) RGD PMID:25470454 MGI:5689082 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616 		JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25225333)		 Ensembl
RGD		 PMID:25225333 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:47,309,607...47,357,432
Ensembl chr13:47,309,614...47,357,465 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:196,187,914...196,198,843
Ensembl chr 1:196,187,835...196,198,844 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G LOC100364335 cold shock domain-containing protein E1-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:78,477,560...78,481,251 JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IEA		 (PMID:11051545), (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 PMID:19029303 GO_REF:0000107 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISO
IEA		 (PMID:12881431)
GO_REF:0000107		 RGD
Ensembl		 PMID:12881431 GO_REF:0000107 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:76,880,867...76,905,148
Ensembl chr 1:76,880,867...76,905,113 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:36,048,357...36,353,206
Ensembl chr 6:36,048,191...36,352,984 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO
ISS		 (PMID:18447585)
GO_REF:0000024		 RGD
UniProt		 PMID:18447585 GO_REF:0000024 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4433050 (PMID:24274065)		 Ensembl
RGD		 PMID:24274065 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay involved_in ISO MGI:107995|MGI:1915384 (PMID:27040500) RGD PMID:27040500 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
IEA
ISS		 (PMID:18377426)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18377426 GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215 		JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 IDA RGD PMID:8166639 RGD:401851045 NCBI chr 7:8,883,855...8,886,315
Ensembl chr 7:8,883,851...8,886,310 		JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:2302419) RGD PMID:2302419 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375 		JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474 		JBrowse link
G F8a1 coagulation factor VIII-associated 1 involved_in ISO
ISS		 (PMID:27815841)
GO_REF:0000024		 RGD
UniProt		 PMID:27815841 GO_REF:0000024 NCBI chr  X:150,957,357...150,958,871
Ensembl chr  X:150,916,679...150,960,168 		JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
Ensembl chr 8:39,910,534...39,924,628 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IMP
ISO		 PMID:17517623
(MGI:6148636|PMID:17517623)		 RGD PMID:17517623 PMID:17517623 MGI:6148636, RGD:13514081 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:81,153,491...81,224,643
Ensembl chr11:81,193,649...81,221,784 		JBrowse link
G LOC134484027 40-kDa huntingtin-associated protein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29295817)		 UniProt
Ensembl
RGD		 PMID:29295817 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
IBA
IEA		 (MGI:5303043|PMID:21874017)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:21874017 GO_REF:0000033 GO_REF:0000118 MGI:5303043 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO		 GO_REF:0000024
(MGI:5467682|PMID:23185022)		 UniProt
RGD		 PMID:23185022 GO_REF:0000024 MGI:5467682 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,401,400...10,430,059
Ensembl chr19:10,401,532...10,429,987 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:10764772)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10764772 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:140,235,371...140,260,546
Ensembl chr 3:140,235,373...140,260,546 		JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5758867 (PMID:25683716) RGD PMID:25683716 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) RGD PMID:25088257 MGI:5614537 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:130,768,467...130,772,122
Ensembl chr 6:130,768,141...130,772,970 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3808636|PMID:18678708)		 UniProt
Ensembl
RGD		 PMID:18678708 GO_REF:0000024 GO_REF:0000107 MGI:3808636 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Camlg calcium modulating ligand involved_in ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:8,992,697...9,003,576
Ensembl chr17:8,992,696...9,003,552 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (PMID:24949970) RGD PMID:24949970 NCBI chr10:4,927,799...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Csnk2b casein kinase 2 beta involved_in ISO (PMID:28031292) RGD PMID:28031292 NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in ISO
IEA		 (PMID:32269044)
GO_REF:0000107		 RGD
Ensembl		 PMID:32269044 GO_REF:0000107 NCBI chr 7:83,091,037...83,174,451
Ensembl chr 7:83,091,039...83,174,451 		JBrowse link
G ENSRNOG00000069696 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 2:11,225,135...11,226,004 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO
IBA
IEA
ISS		 (PMID:15313915)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:15313915 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:13,935,029...15,442,620
Ensembl chr15:13,934,995...15,442,340 		JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in ISO
IEA		 (MGI:3807767|PMID:11546783)
GO_REF:0000107		 RGD
Ensembl		 PMID:11546783 GO_REF:0000107 MGI:3807767 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118)
GO:0010628 (MGI:5603002|PMID:24904118)		 RGD PMID:24904118 MGI:5603002 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24613385)		 UniProt
Ensembl
RGD		 PMID:24613385 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488 		JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:24960163)		 GO_Central
RGD		 PMID:24960163 GO_REF:0000033 NCBI chr 8:121,441,285...121,446,801
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (PMID:23695157) RGD PMID:23695157 NCBI chr 6:488,923...506,882
Ensembl chr 6:488,969...506,860 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in ISO
IBA		 (MGI:3829128|PMID:17592138)
GO_REF:0000033		 RGD
GO_Central		 PMID:17592138 GO_REF:0000033 MGI:3829128 NCBI chr19:20,222,811...20,273,570
Ensembl chr19:20,222,776...20,273,570 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO		 GO_REF:0000107
(PMID:26678539)		 Ensembl
RGD		 PMID:26678539 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
IEA		 (PMID:17015834)
GO_REF:0000107		 RGD
Ensembl		 PMID:17015834 GO_REF:0000107 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO MGI:5293435 (PMID:21715333) RGD PMID:21715333 NCBI chr15:40,022,873...40,034,014
Ensembl chr15:40,023,002...40,034,014 		JBrowse link
G Phf20l1 PHD finger protein 20-like 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24492612)		 UniProt
Ensembl
RGD		 PMID:24492612 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:98,330,580...98,396,526
Ensembl chr 7:98,330,580...98,396,526 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5897550|PMID:21804542)		 UniProt
RGD		 PMID:21804542 GO_REF:0000024 MGI:5897550 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599 		JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106 		JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,876,260...132,928,328
Ensembl chr 4:132,876,361...132,928,316 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO MGI:3818522 (PMID:17981124) RGD PMID:17981124 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16611981)		 Ensembl
RGD		 PMID:16611981 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 acts_upstream_of_or_within ISO (PMID:22285184) RGD PMID:22285184 NCBI chr 8:110,111,097...110,214,734
Ensembl chr 8:110,111,122...110,214,720 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO
IEA		 (PMID:11278372)
GO_REF:0000107		 RGD
Ensembl		 PMID:11278372 GO_REF:0000107 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO
IBA
IEA
ISS		 (PMID:23213251)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:23213251 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (PMID:31537781) RGD PMID:31537781 NCBI chr 8:45,112,737...45,116,345 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:20351172)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:20351172 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:205,765,309...205,769,234
Ensembl chr 1:205,745,120...205,816,520 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Usp26 ubiquitin specific peptidase 26 involved_in ISO (PMID:28839133)
(MGI:5926846|PMID:28839133)		 RGD PMID:28839133 MGI:5926846 NCBI chr  X:131,317,200...131,363,964
Ensembl chr  X:131,319,194...131,363,970 		JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in ISO (PMID:34102342) RGD PMID:34102342 NCBI chr19:27,006,046...27,037,449
Ensembl chr19:27,006,046...27,037,437 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO
IEA		 (PMID:26678539)
GO_REF:0000107		 RGD
Ensembl		 PMID:26678539 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:33378666) RGD PMID:33378666 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301 		JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO
IEA		 (MGI:5643972|PMID:25751059)
GO_REF:0000107		 RGD
Ensembl		 PMID:25751059 GO_REF:0000107 MGI:5643972 NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902 		JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 acts_upstream_of_or_within ISO (PMID:18374643) RGD PMID:18374643 NCBI chr 7:62,897,282...62,914,295
Ensembl chr 7:62,897,282...62,914,295 		JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor involved_in ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:25,315,236...25,319,821 JBrowse link
G Azin1 antizyme inhibitor 1 involved_in IDA
IEA
IBA
ISS
ISO		 downregulates antizyme degradation of ODC
GO_REF:0000118
GO_REF:0000033
GO_REF:0000024
(PMID:17900240)
GO_REF:0000107		 TreeGrafter
GO_Central
UniProt
RGD
Ensembl		 PMID:17900240 PMID:8631929 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:633334 NCBI chr 7:69,654,773...69,681,578
Ensembl chr 7:69,654,663...69,681,578 		JBrowse link
G Azin2 antizyme inhibitor 2 involved_in ISO
IEA
IBA
ISS		 (PMID:17900240)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:17900240 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:141,281,310...141,310,415
Ensembl chr 5:141,281,249...141,310,397 		JBrowse link
G Banp Btg3 associated nuclear protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:15701641)		 GO_Central
RGD		 PMID:15701641 GO_REF:0000033 NCBI chr19:50,007,710...50,082,742
Ensembl chr19:50,007,881...50,082,738 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO
IEA
ISS		 (PMID:16173922)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16173922 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Cyp51 cytochrome P450, family 51 involved_in ISO (MGI:6270905|PMID:20876579) RGD PMID:20876579 MGI:6270905 NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO
IEA
ISS		 (PMID:19903888)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19903888 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280 		JBrowse link
G Dedd death effector domain-containing acts_upstream_of_or_within ISO MGI:3707325 (PMID:21135503) RGD PMID:21135503 NCBI chr13:83,755,874...83,769,982
Ensembl chr13:83,756,108...83,769,332 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (PMID:20724702) RGD PMID:20724702 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Fbxo43 F-box protein 43 acts_upstream_of_or_within ISO (PMID:16966421) RGD PMID:16966421 NCBI chr 7:67,333,161...67,346,751
Ensembl chr 7:67,333,162...67,346,751 		JBrowse link
G Flna filamin A involved_in ISO (PMID:18322202) RGD PMID:18322202 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:86,454,256...86,771,437
Ensembl chr13:86,453,926...86,771,411 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16841086)		 Ensembl
RGD		 PMID:16841086 GO_REF:0000107 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95822 (PMID:15317856)		 Ensembl
RGD		 PMID:15317856 GO_REF:0000107 NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95820 (PMID:15317856)		 Ensembl
RGD		 PMID:15317856 GO_REF:0000107 NCBI chr10:100,488,430...100,507,083
Ensembl chr10:100,488,431...100,506,427 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in ISO
IEA		 (MGI:6270905|PMID:20876579)
GO_REF:0000107		 RGD
Ensembl		 PMID:20876579 GO_REF:0000107 MGI:6270905 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:15185208) RGD PMID:15185208 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO (PMID:17379480), (PMID:18156187)
(MGI:3843426|PMID:17379480)		 RGD PMID:17379480 PMID:18156187 MGI:3843426 NCBI chr 7:55,653,949...55,714,371
Ensembl chr 7:55,653,962...55,713,121 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in ISO (PMID:11459825) RGD PMID:11459825 NCBI chr 4:95,906,692...95,918,885
Ensembl chr 4:95,906,817...95,913,470 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO
ISS		 (PMID:11459826)
GO_REF:0000024		 RGD
UniProt		 PMID:11459826 GO_REF:0000024 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO
IEA		 (PMID:10608892)
GO_REF:0000107		 RGD
Ensembl		 PMID:10608892 GO_REF:0000107 NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226 		JBrowse link
G Mycbp2 MYC binding protein 2 acts_upstream_of_or_within ISO (PMID:19398581) RGD PMID:19398581 NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498 		JBrowse link
G Nell1 neural EGFL like 1 involved_in ISO
ISS		 (PMID:21723284)
GO_REF:0000024		 RGD
UniProt		 PMID:21723284 GO_REF:0000024 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4943392|PMID:18003616)		 Ensembl
RGD		 PMID:18003616 GO_REF:0000107 MGI:4943392 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in ISO
ISS		 (PMID:15687255)
GO_REF:0000024		 RGD
UniProt		 PMID:15687255 GO_REF:0000024 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:20448149) RGD PMID:20448149 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (MGI:5575789|PMID:24899725) RGD PMID:24899725 MGI:5575789 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:24732013) RGD PMID:24732013 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042 		JBrowse link
G Phf20l1 PHD finger protein 20-like 1 involved_in ISO (PMID:29358331) RGD PMID:29358331 NCBI chr 7:98,330,580...98,396,526
Ensembl chr 7:98,330,580...98,396,526 		JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:11533658) RGD PMID:11533658 NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO (PMID:15808853) RGD PMID:15808853 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:15923614) RGD PMID:15923614 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484 		JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 5:57,834,467...57,843,087
Ensembl chr 5:57,834,629...57,843,086 		JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863 		JBrowse link
G Rilp Rab interacting lysosomal protein involved_in ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:60,355,276...60,358,434
Ensembl chr10:60,355,278...60,358,781 		JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2387774 (PMID:15509762), (PMID:16319172)		 Ensembl
RGD		 PMID:15509762 PMID:16319172 GO_REF:0000107 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO (PMID:23951410) RGD PMID:23951410 NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (PMID:16611981) RGD PMID:16611981 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
IEA
ISS		 (PMID:20543840)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20543840 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Smad3 SMAD family member 3 involved_in IDA
IMP		 PMID:16690606
PMID:20097766		 CACAO
BHF-UCL		 PMID:16690606 PMID:20097766 RGD:15023472, RGD:11079190 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950 		JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:45,992,446...46,025,361
Ensembl chr20:45,992,720...46,025,379 		JBrowse link
G Tmem132a transmembrane protein 132A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5548753 (PMID:33324648)		 Ensembl
RGD		 PMID:33324648 GO_REF:0000107 NCBI chr 1:207,507,074...207,518,756
Ensembl chr 1:207,507,077...207,518,758 		JBrowse link
G Trim40 tripartite motif-containing 40 involved_in ISO (PMID:21474709) RGD PMID:21474709 NCBI chr20:1,676,114...1,685,906
Ensembl chr20:1,676,270...1,685,214 		JBrowse link
negative regulation of receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:10,617,993...10,670,724
Ensembl chr 8:10,617,993...10,668,172 		JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like acts_upstream_of_or_within ISO (PMID:32558204) RGD PMID:32558204 NCBI chr19:50,669,965...50,673,409
Ensembl chr19:50,669,967...50,673,366 		JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in ISO
IBA		 (PMID:28007894)
GO_REF:0000033		 RGD
GO_Central		 PMID:28007894 GO_REF:0000033 NCBI chr15:18,565,214...18,595,797
Ensembl chr15:18,564,633...18,593,524 		JBrowse link
negative regulation of triglyceride catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc3 apolipoprotein C3 involved_in ISO
IEA
IBA		 (PMID:18635818), (PMID:3973011)
GO_REF:0000118
GO_REF:0000033		 RGD
TreeGrafter
GO_Central		 PMID:3973011 PMID:18635818 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3617276|PMID:16219662)		 UniProt
RGD		 PMID:16219662 GO_REF:0000024 MGI:3617276 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939 		JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma IMP RGD PMID:21435395 RGD:6482711 NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5476606|PMID:23345411), (MGI:5559662|PMID:22675471)		 UniProt
RGD		 PMID:22675471 PMID:23345411 GO_REF:0000024 MGI:5476606 MGI:5559662 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (MGI:5811185|PMID:27322061) RGD PMID:27322061 MGI:5811185 NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513 		JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (PMID:20100865) RGD PMID:20100865 NCBI chr20:5,963,658...6,117,139
Ensembl chr20:5,963,678...6,117,148 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within		 ISO (PMID:16173922)
(PMID:23277542)
(PMID:18560357)		 RGD PMID:16173922 PMID:18560357 PMID:23277542 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Pdcl3 phosducin-like 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23792958)
GO_REF:0000107		 RGD
Ensembl		 PMID:23792958 GO_REF:0000107 NCBI chr 9:41,234,322...41,243,769
Ensembl chr 9:41,234,234...41,243,735 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in ISO (MGI:5688415|PMID:26070566) RGD PMID:26070566 MGI:5688415 NCBI chr 2:197,927,750...197,932,760
Ensembl chr 2:197,927,220...197,933,648 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)		 RGD PMID:30683861 MGI:6277293 NCBI chr10:101,669,240...101,697,643
Ensembl chr10:101,669,224...101,697,656 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO
IEA		 (PMID:15314173)
GO_REF:0000107		 RGD
Ensembl		 PMID:15314173 GO_REF:0000107 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23129660)		 UniProt
Ensembl
RGD		 PMID:23129660 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:1343085 (PMID:19684112) RGD PMID:19684112 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
G Svip small VCP interacting protein involved_in IDA PMID:17000876 ParkinsonsUK-UCL PMID:17000876 RGD:10047192 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 4:157,619,663...157,634,681
Ensembl chr 4:157,619,643...157,634,711 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (PMID:16601693) RGD PMID:16601693 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS		 (PMID:18218628)
GO_REF:0000024		 RGD
UniProt		 PMID:18218628 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:26001795) RGD PMID:26001795 NCBI chr17:61,138,663...61,217,423
Ensembl chr17:61,138,709...61,187,960 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (MGI:5903342|PMID:28188285) RGD PMID:28188285 MGI:5903342 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO
ISS		 (MGI:5816163|PMID:27510903)
GO_REF:0000024		 RGD
UniProt		 PMID:27510903 GO_REF:0000024 MGI:5816163 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Phax phosphorylated adaptor for RNA export involved_in ISO (PMID:28297668) RGD PMID:28297668 NCBI chr18:50,053,133...50,069,823
Ensembl chr18:50,053,023...50,069,823 		JBrowse link
G Zcchc17 zinc finger CCHC-type containing 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:142,658,626...142,700,440
Ensembl chr 5:142,658,589...142,700,426 		JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:22238380) RGD PMID:22238380 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in ISO (PMID:25467444), (PMID:26950371) RGD PMID:25467444 PMID:26950371
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO (PMID:27510903) RGD PMID:27510903 NCBI chr16:22,837,583...22,868,320
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:26482878), (PMID:26950371) RGD PMID:26482878 PMID:26950371 NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560 		JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl1 methyltransferase 1, tRNA methylguanosine involved_in ISO (PMID:36599982), (PMID:36599985) RGD PMID:36599982 PMID:36599985 NCBI chr 7:62,864,860...62,869,202
Ensembl chr 7:62,864,853...62,869,202 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO (MGI:6194005|PMID:22885326) RGD PMID:22885326 MGI:6194005 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Slfn2 schlafen family member 2 involved_in ISO (MGI:6713610|PMID:33986151) RGD PMID:33986151 MGI:6713610 NCBI chr10:67,953,322...67,959,659
Ensembl chr10:67,953,171...67,959,458 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6194005|PMID:22885326)		 UniProt
RGD		 PMID:22885326 GO_REF:0000024 MGI:6194005 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      catabolic process 2859
        negative regulation of catabolic process 373
          negative regulation of DNA catabolic process + 6
          negative regulation of RNA catabolic process + 91
          negative regulation of UDP-glucose catabolic process 0
          negative regulation of amide catabolic process + 0
          negative regulation of amine catabolic process + 1
          negative regulation of anthocyanin catabolic process 0
          negative regulation of cell wall polysaccharide catabolic process + 0
          negative regulation of cellobiose catabolic process 0
          negative regulation of cellodextrin catabolic process 0
          negative regulation of cellooligosaccharide catabolic process 0
          negative regulation of cellotriose catabolic process 0
          negative regulation of cellular alcohol catabolic process 0
          negative regulation of cellular catabolic process + 114
          negative regulation of cellulose catabolic process 0
          negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process 0
          negative regulation of collagen catabolic process 1
          negative regulation of cyclodextrin catabolic process 0
          negative regulation of galactoglucomannan catabolic process 0
          negative regulation of galactomannan catabolic process 0
          negative regulation of glucomannan catabolic process 0
          negative regulation of glucose catabolic process to lactate via pyruvate 3
          negative regulation of lipid catabolic process + 32
          negative regulation of nucleotide catabolic process + 23
          negative regulation of pectin catabolic process 0
          negative regulation of protein catabolic process + 123
          negative regulation of starch catabolic process + 0
          negative regulation of syringal lignin catabolic process 0
          negative regulation of tetrapyrrole catabolic process + 0
          negative regulation of ubiquitin-dependent protein catabolic process + 62
          negative regulation of xylose catabolic process to ethanol 0
Path 2
Term Annotations click to browse term
  biological_process 20413
    biological regulation 13755
      regulation of biological process 13322
        regulation of metabolic process 6641
          negative regulation of metabolic process 3098
            negative regulation of catabolic process 373
              negative regulation of DNA catabolic process + 6
              negative regulation of RNA catabolic process + 91
              negative regulation of UDP-glucose catabolic process 0
              negative regulation of amide catabolic process + 0
              negative regulation of amine catabolic process + 1
              negative regulation of anthocyanin catabolic process 0
              negative regulation of cell wall polysaccharide catabolic process + 0
              negative regulation of cellobiose catabolic process 0
              negative regulation of cellodextrin catabolic process 0
              negative regulation of cellooligosaccharide catabolic process 0
              negative regulation of cellotriose catabolic process 0
              negative regulation of cellular alcohol catabolic process 0
              negative regulation of cellular catabolic process + 114
              negative regulation of cellulose catabolic process 0
              negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process 0
              negative regulation of collagen catabolic process 1
              negative regulation of cyclodextrin catabolic process 0
              negative regulation of galactoglucomannan catabolic process 0
              negative regulation of galactomannan catabolic process 0
              negative regulation of glucomannan catabolic process 0
              negative regulation of glucose catabolic process to lactate via pyruvate 3
              negative regulation of lipid catabolic process + 32
              negative regulation of nucleotide catabolic process + 23
              negative regulation of pectin catabolic process 0
              negative regulation of protein catabolic process + 123
              negative regulation of starch catabolic process + 0
              negative regulation of syringal lignin catabolic process 0
              negative regulation of tetrapyrrole catabolic process + 0
              negative regulation of ubiquitin-dependent protein catabolic process + 62
              negative regulation of xylose catabolic process to ethanol 0
paths to the root