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ONTOLOGY REPORT - ANNOTATIONS

Term:animal organ morphogenesis
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Accession:GO:0009887 term browser browse the term
Definition:Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
Synonyms:broad_synonym: histogenesis and organogenesis
 only_in_taxon: NCBITaxon:6072 ! Eumetazoa


show annotations for term's descendants           Sort by:
animal organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:19861679) GO_Central
MGI		 PMID:19861679 GO_REF:0000033 NCBI chr 2:153,187,750...153,245,927
Ensembl chr 2:153,187,749...153,245,927 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:3,476,892...3,560,811
Ensembl chr12:3,476,857...3,556,852 		JBrowse link
G Asxl3 ASXL transcriptional regulator 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:22,477,195...22,663,284
Ensembl chr18:22,477,303...22,663,072 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:8170972) MGI PMID:8170972 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IMP (PMID:8898212) MGI PMID:8898212 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:7590254) MGI PMID:7590254 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Cdx1 caudal type homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:61,151,934...61,169,292
Ensembl chr18:61,151,934...61,169,271 		JBrowse link
G Cdx2 caudal type homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080 		JBrowse link
G Cdx4 caudal type homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:102,365,004...102,373,830
Ensembl chr  X:102,365,004...102,374,198 		JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like acts_upstream_of_or_within IMP (PMID:11242111) MGI PMID:11242111 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G Cul1 cullin 1 acts_upstream_of_or_within IMP (PMID:10508527) MGI PMID:10508527 NCBI chr 6:47,430,516...47,503,078
Ensembl chr 6:47,430,332...47,503,073 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in TAS (MGI:1934356|PMID:9634237) PINC PMID:9634237 MGI:1934356 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in NAS (MGI:1342663|PMID:10473134) UniProt PMID:10473134 MGI:1342663 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G E2f4 E2F transcription factor 4 acts_upstream_of_or_within IMP (PMID:10983977)
(PMID:10983976)		 MGI PMID:10983976 PMID:10983977 NCBI chr 8:106,024,295...106,032,002
Ensembl chr 8:106,024,295...106,032,002 		JBrowse link
G E2f5 E2F transcription factor 5 acts_upstream_of_or_within IMP (PMID:9553039) MGI PMID:9553039 NCBI chr 3:14,638,370...14,671,369
Ensembl chr 3:14,643,701...14,671,369 		JBrowse link
G Efnb2 ephrin B2 acts_upstream_of_or_within IMP (PMID:15223334) MGI PMID:15223334 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within IMP (PMID:14517255) MGI PMID:14517255 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278 		JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within IMP (PMID:15223334) MGI PMID:15223334 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Ereg epiregulin involved_in TAS (MGI:1333540|PMID:9337852) UniProt PMID:9337852 MGI:1333540 NCBI chr 5:91,222,476...91,241,508
Ensembl chr 5:91,222,481...91,241,505 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:12070080) MGI PMID:12070080 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:38,971,725...39,062,532
Ensembl chr18:38,971,726...39,062,525 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 IMP
IBA
IDA		 (PMID:12615071)
(PMID:14651921)
(PMID:10964474), (PMID:15843416)		 MGI
GO_Central		 PMID:10964474 PMID:12615071 PMID:14651921 PMID:15843416 GO_REF:0000033 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf15 fibroblast growth factor 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:144,450,269...144,454,690
Ensembl chr 7:144,450,268...144,454,690 		JBrowse link
G Fgf16 fibroblast growth factor 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:104,808,083...104,820,138
Ensembl chr  X:104,807,885...104,818,545 		JBrowse link
G Fgf17 fibroblast growth factor 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:70,873,643...70,880,064
Ensembl chr14:70,873,643...70,879,708 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:33,066,970...33,097,400
Ensembl chr11:33,067,430...33,097,400 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgf20 fibroblast growth factor 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:40,732,206...40,740,060
Ensembl chr 8:40,732,207...40,761,372 		JBrowse link
G Fgf21 fibroblast growth factor 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:45,263,314...45,264,914
Ensembl chr 7:45,263,310...45,264,914 		JBrowse link
G Fgf22 fibroblast growth factor 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:79,590,887...79,593,629
Ensembl chr10:79,590,910...79,594,430 		JBrowse link
G Fgf23 fibroblast growth factor 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:127,049,865...127,059,257
Ensembl chr 6:127,049,865...127,058,371 		JBrowse link
G Fgf3 fibroblast growth factor 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Fgf4 fibroblast growth factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgf5 fibroblast growth factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:98,402,108...98,424,892
Ensembl chr 5:98,402,043...98,424,889 		JBrowse link
G Fgf6 fibroblast growth factor 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:126,992,505...127,001,681
Ensembl chr 6:126,992,549...127,005,150 		JBrowse link
G Fgf7 fibroblast growth factor 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:125,876,578...125,933,105
Ensembl chr 2:125,876,578...125,933,105 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:12666202) MGI PMID:12666202 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fli1 Friend leukemia integration 1 acts_upstream_of_or_within IMP (PMID:10981960) MGI PMID:10981960 NCBI chr 9:32,333,500...32,454,292
Ensembl chr 9:32,333,500...32,454,157 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:11809759) MGI
GO_Central		 PMID:11809759 GO_REF:0000033 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Foxf2 forkhead box F2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Gamt guanidinoacetate methyltransferase acts_upstream_of_or_within IMP (PMID:15028668) MGI PMID:15028668 NCBI chr10:80,093,985...80,096,846
Ensembl chr10:80,093,985...80,096,846 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within IMP (PMID:15548585) MGI PMID:15548585 NCBI chr10:128,716,393...128,727,587
Ensembl chr10:128,718,164...128,727,587 		JBrowse link
G Gmnn geminin acts_upstream_of_or_within IDA (PMID:9671596) MGI PMID:9671596 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906 		JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within IMP (PMID:9853964) MGI PMID:9853964 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15198975) GO_Central
MGI		 PMID:15198975 GO_REF:0000033 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Grem2 gremlin 2, DAN family BMP antagonist involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:174,661,352...174,749,386
Ensembl chr 1:174,661,351...174,749,385 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within IMP (PMID:10894547) MGI PMID:10894547 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:14736744) MGI PMID:14736744 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Hhip Hedgehog-interacting protein acts_upstream_of_or_within IMP (PMID:12917290) MGI PMID:12917290 NCBI chr 8:80,692,480...80,784,637
Ensembl chr 8:80,692,480...80,784,635 		JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within IMP (PMID:10210434) MGI PMID:10210434 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788 		JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within IMP (PMID:15100241) MGI PMID:15100241 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:15226261) MGI PMID:15226261 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Igf1r insulin-like growth factor I receptor acts_upstream_of_or_within IMP (PMID:12101187) MGI PMID:12101187 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416 		JBrowse link
G Igf2 insulin-like growth factor 2 acts_upstream_of_or_within IMP (PMID:12101187) MGI PMID:12101187 NCBI chr 7:142,204,505...142,220,566
Ensembl chr 7:142,204,503...142,220,553 		JBrowse link
G Insr insulin receptor acts_upstream_of_or_within IMP (PMID:12101187) MGI PMID:12101187 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Jag1 jagged 1 acts_upstream_of_or_within IMP (PMID:11181574) MGI PMID:11181574 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Lama1 laminin, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:68,004,129...68,129,640
Ensembl chr17:68,004,254...68,129,642 		JBrowse link
G Lama2 laminin, alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:26,857,281...27,493,021
Ensembl chr10:26,856,032...27,495,754 		JBrowse link
G Lama3 laminin, alpha 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:12,466,806...12,716,070
Ensembl chr18:12,466,876...12,716,070 		JBrowse link
G Lama5 laminin, alpha 5 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:12743034) MGI
GO_Central		 PMID:12743034 GO_REF:0000033 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Lamb1 laminin B1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643 		JBrowse link
G Lamb2 laminin, beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729 		JBrowse link
G Lamb3 laminin, beta 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:192,976,661...193,026,186
Ensembl chr 1:192,890,007...193,026,186 		JBrowse link
G Lamc1 laminin, gamma 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532 		JBrowse link
G Lamc2 laminin, gamma 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:152,998,502...153,062,193
Ensembl chr 1:152,998,502...153,062,193 		JBrowse link
G Lamc3 laminin gamma 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:31,777,293...31,839,095
Ensembl chr 2:31,777,303...31,836,551 		JBrowse link
G Lhx4 LIM homeobox protein 4 acts_upstream_of_or_within IMP (PMID:12183375) MGI PMID:12183375 NCBI chr 1:155,573,777...155,627,481
Ensembl chr 1:155,573,777...155,627,430 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IDA (PMID:11684667) MGI PMID:11684667 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IDA (PMID:11684667) MGI PMID:11684667 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:10747854) MGI PMID:10747854 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Megf9 multiple EGF-like-domains 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:70,350,164...70,453,165
Ensembl chr 4:70,345,302...70,453,232 		JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:18,830,428...18,968,992
Ensembl chr11:18,829,817...18,968,985 		JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:115,691,745...115,897,925
Ensembl chr 2:115,693,545...115,896,320 		JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:15,908,684...15,920,435
Ensembl chr 7:15,909,015...15,920,429 		JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:138,809,602...138,820,437
Ensembl chr 4:138,809,595...138,820,304 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IMP (PMID:10664446)
(PMID:10852901)		 MGI PMID:10664446 PMID:10852901 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Nek8 NIMA (never in mitosis gene a)-related expressed kinase 8 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:78,056,932...78,067,501
Ensembl chr11:78,056,932...78,067,501 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within IMP (PMID:8557195) MGI PMID:8557195 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 acts_upstream_of_or_within IMP (PMID:10754103) MGI PMID:10754103 NCBI chr 7:23,085,314...23,141,348
Ensembl chr 7:23,085,314...23,141,347 		JBrowse link
G Notch2 notch 2 involved_in TAS (MGI:3691907|PMID:12496659) UniProt PMID:12496659 MGI:3691907 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Ntn1 netrin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:68,100,190...68,277,652
Ensembl chr11:68,100,190...68,291,649 		JBrowse link
G Ntn3 netrin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:24,422,805...24,428,361
Ensembl chr17:24,422,822...24,428,505 		JBrowse link
G Ntn4 netrin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:93,476,911...93,581,834
Ensembl chr10:93,476,543...93,583,069 		JBrowse link
G Ntng1 netrin G1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:109,687,366...110,057,291
Ensembl chr 3:109,687,356...110,051,327 		JBrowse link
G Ntng2 netrin G2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:29,084,738...29,138,111
Ensembl chr 2:29,084,553...29,143,017 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:14625556) MGI PMID:14625556 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within IMP (PMID:20484223) MGI PMID:20484223 NCBI chr 7:121,706,485...121,732,203
Ensembl chr 7:121,706,485...121,732,208 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within TAS (PMID:10197584) MGI PMID:10197584 NCBI chr 2:147,203,850...147,216,972
Ensembl chr 2:147,203,845...147,235,215 		JBrowse link
G Pax4 paired box 4 acts_upstream_of_or_within TAS (PMID:10197584) MGI PMID:10197584 NCBI chr 6:28,442,333...28,449,339
Ensembl chr 6:28,442,333...28,449,352 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within TAS (PMID:10197584) MGI PMID:10197584 NCBI chr 4:44,524,748...44,710,694
Ensembl chr 4:44,524,757...44,710,487 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within TAS (PMID:10197584) MGI PMID:10197584 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839 		JBrowse link
G Pax8 paired box 8 acts_upstream_of_or_within TAS (PMID:10197584) MGI PMID:10197584 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within TAS (PMID:10197584) MGI PMID:10197584 NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:11912494) MGI
GO_Central		 PMID:11912494 GO_REF:0000033 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pbx2 pre B cell leukemia homeobox 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:34,811,233...34,816,374
Ensembl chr17:34,810,240...34,816,374 		JBrowse link
G Pbx3 pre B cell leukemia homeobox 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:34,061,469...34,264,168
Ensembl chr 2:34,061,469...34,263,154 		JBrowse link
G Pbx4 pre B cell leukemia homeobox 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:70,285,127...70,324,942
Ensembl chr 8:70,285,141...70,324,942 		JBrowse link
G Pdgfa platelet derived growth factor, alpha acts_upstream_of_or_within IGI
IMP		 (PMID:15361870)
(PMID:14522834)		 MGI PMID:14522834 PMID:15361870 NCBI chr 5:138,961,761...138,986,336
Ensembl chr 5:138,961,769...138,983,125 		JBrowse link
G Pdgfc platelet-derived growth factor, C polypeptide acts_upstream_of_or_within IGI
IMP		 (PMID:15361870) MGI PMID:15361870 NCBI chr 3:80,943,723...81,121,347
Ensembl chr 3:80,943,723...81,121,347 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide acts_upstream_of_or_within IMP (PMID:10806482) MGI PMID:10806482 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Phlda2 pleckstrin homology like domain, family A, member 2 acts_upstream_of_or_within IMP (PMID:12032310) MGI PMID:12032310 NCBI chr 7:143,055,282...143,056,882
Ensembl chr 7:143,055,282...143,056,887 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:10572050) MGI PMID:10572050 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Pnpla6 patatin-like phospholipase domain containing 6 acts_upstream_of_or_within IMP (PMID:14749382) MGI PMID:14749382 NCBI chr 8:3,565,341...3,594,267
Ensembl chr 8:3,565,384...3,594,267 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:33144400) MGI PMID:33144400 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha acts_upstream_of_or_within TAS (PMID:7775586) MGI PMID:7775586 NCBI chr11:109,539,849...109,560,489
Ensembl chr11:109,540,231...109,560,482 		JBrowse link
G Prkar1b protein kinase, cAMP dependent regulatory, type I beta acts_upstream_of_or_within TAS (PMID:7775586) MGI PMID:7775586 NCBI chr 5:139,003,059...139,136,458
Ensembl chr 5:139,003,061...139,135,756 		JBrowse link
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:12183375)
(PMID:15459176)		 MGI PMID:12183375 PMID:15459176 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (PMID:12917290) MGI PMID:12917290 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) acts_upstream_of_or_within IMP (PMID:9120401) MGI PMID:9120401 NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158 		JBrowse link
G Slc26a4 solute carrier family 26, member 4 acts_upstream_of_or_within ISS (PMID:10449762) MGI PMID:10449762 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968 		JBrowse link
G Slit3 slit guidance ligand 3 acts_upstream_of_or_within IGI
IMP		 (PMID:15091338)
(PMID:14550534)		 MGI PMID:14550534 PMID:15091338 NCBI chr11:35,012,283...35,599,334
Ensembl chr11:35,012,051...35,599,334 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 acts_upstream_of_or_within IMP (PMID:11604513) MGI PMID:11604513 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246 		JBrowse link
G Sox3 SRY (sex determining region Y)-box 3 acts_upstream_of_or_within IMP (PMID:14981518) MGI PMID:14981518 NCBI chr  X:59,934,972...59,937,045
Ensembl chr  X:59,934,972...59,937,036 		JBrowse link
G Sycp2 synaptonemal complex protein 2 acts_upstream_of_or_within IMP (PMID:16717126) MGI PMID:16717126 NCBI chr 2:177,987,088...178,051,580
Ensembl chr 2:177,987,086...178,049,478 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within ISO (PMID:9207801) MGI PMID:9207801 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tcf21 transcription factor 21 acts_upstream_of_or_within IMP (PMID:10944221) MGI PMID:10944221 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within TAS (PMID:8421714) MGI PMID:8421714 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 acts_upstream_of_or_within IMP (PMID:14697364) MGI PMID:14697364 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in ISO RGD
MGI		 PMID:10767079 GO_REF:0000096 MGI:4417868 RGD:1601612 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tgm1 transglutaminase 1, K polypeptide acts_upstream_of_or_within IMP (PMID:10567386) MGI PMID:10567386 NCBI chr14:55,937,466...55,951,378
Ensembl chr14:55,937,466...55,951,383 		JBrowse link
G Th tyrosine hydroxylase acts_upstream_of_or_within IMP (PMID:7715703) MGI PMID:7715703 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865 		JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within IMP (PMID:9927422) MGI PMID:9927422 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Thrb thyroid hormone receptor beta acts_upstream_of_or_within IMP (PMID:9927422) MGI PMID:9927422 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IMP (PMID:8879212) MGI PMID:8879212 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 acts_upstream_of_or_within IMP (PMID:9950424) MGI PMID:9950424 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483 		JBrowse link
G Traf6 TNF receptor-associated factor 6 acts_upstream_of_or_within IMP (PMID:15705807) MGI PMID:15705807 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014 		JBrowse link
G Treh trehalase (brush-border membrane glycoprotein) involved_in ISO RGD
MGI		 PMID:9644033 GO_REF:0000096 MGI:4417868 RGD:61773 NCBI chr 9:44,584,530...44,597,602
Ensembl chr 9:44,584,530...44,597,602 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:10227294) MGI PMID:10227294 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Tymp thymidine phosphorylase acts_upstream_of_or_within TAS (PMID:10229200) MGI PMID:10229200 NCBI chr15:89,255,834...89,261,282
Ensembl chr15:89,256,134...89,261,242 		JBrowse link
G Ush2a usherin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:187,995,035...188,697,694
Ensembl chr 1:187,994,220...188,697,238 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor acts_upstream_of_or_within IMP (PMID:9241280) MGI PMID:9241280 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within IMP (PMID:14634646) MGI PMID:14634646 NCBI chr 8:54,530,567...54,639,489
Ensembl chr 8:54,530,641...54,640,131 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt10a wingless-type MMTV integration site family, member 10A acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr 1:74,831,178...74,843,335
Ensembl chr 1:74,830,675...74,843,338 		JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr15:98,668,593...98,676,093
Ensembl chr15:98,668,593...98,676,031 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt2b wingless-type MMTV integration site family, member 2B acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr 3:104,852,121...104,869,025
Ensembl chr 3:104,852,588...104,869,237 		JBrowse link
G Wnt3 wingless-type MMTV integration site family, member 3 acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr11:103,665,000...103,708,854
Ensembl chr11:103,664,976...103,708,783 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Wnt5b wingless-type MMTV integration site family, member 5B acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr 6:119,409,493...119,521,847
Ensembl chr 6:119,409,492...119,521,308 		JBrowse link
G Wnt6 wingless-type MMTV integration site family, member 6 acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr 1:74,793,499...74,824,481
Ensembl chr 1:74,811,051...74,824,481 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Wnt8b wingless-type MMTV integration site family, member 8B acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr19:44,481,912...44,502,712
Ensembl chr19:44,481,911...44,502,712 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within TAS (PMID:9889131) MGI PMID:9889131 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (PMID:17317769) MGI PMID:17317769 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 acts_upstream_of_or_within IMP (PMID:17440044) MGI PMID:17440044 NCBI chr 2:122,109,727...122,129,221
Ensembl chr 2:122,109,728...122,128,930 		JBrowse link
amelogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in IDA (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chr  X:167,959,110...167,970,205
Ensembl chr  X:167,959,110...167,970,196 		JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 involved_in IMP (MGI:6305509|PMID:30504223), (MGI:7280983|PMID:34812512) UniProt PMID:30504223 PMID:34812512 MGI:6305509 MGI:7280983 NCBI chr 1:135,978,321...135,979,810
Ensembl chr 1:135,978,542...135,979,108 		JBrowse link
G Atf2 activating transcription factor 2 involved_in ISO RGD
MGI		 PMID:15218628 GO_REF:0000096 MGI:4417868 RGD:10053659 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator involved_in IDA (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767 		JBrowse link
G Csf3r colony stimulating factor 3 receptor ISO RGD PMID:10206335 RGD:5134351 NCBI chr 4:125,917,241...125,938,233
Ensembl chr 4:125,918,343...125,938,233 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:25027178) MGI PMID:25027178 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Enam enamelin involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:18252720), (PMID:24603688)
(PMID:15649948)
(PMID:22813216)		 GO_Central
MGI		 PMID:15649948 PMID:18252720 PMID:22813216 PMID:24603688 GO_REF:0000033 NCBI chr 5:88,635,834...88,653,908
Ensembl chr 5:88,635,834...88,653,908 		JBrowse link
G Klk4 kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:19578120), (PMID:21454549), (PMID:22243248) MGI
GO_Central		 PMID:19578120 PMID:21454549 PMID:22243248 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:43,530,584...43,535,228
Ensembl chr 7:43,530,584...43,535,228 		JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:43,483,581...43,500,605
Ensembl chr 7:43,491,395...43,500,605 		JBrowse link
G Mmp20 matrix metallopeptidase 20 (enamelysin) involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15557396), (PMID:21454549), (PMID:22243248) GO_Central
MGI		 PMID:15557396 PMID:21454549 PMID:22243248 GO_REF:0000033 NCBI chr 9:7,628,232...7,674,969
Ensembl chr 9:7,628,232...7,674,980 		JBrowse link
G Perp PERP, TP53 apoptosis effector acts_upstream_of_or_within IMP (PMID:21285247) MGI PMID:21285247 NCBI chr10:18,720,819...18,732,821
Ensembl chr10:18,720,768...18,732,821 		JBrowse link
G Relt RELT tumor necrosis factor receptor involved_in IMP
IBA
ISO		 (MGI:6368096|PMID:30506946) UniProt
GO_Central
MGI		 PMID:30506946 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6368096 NCBI chr 7:100,495,054...100,512,690
Ensembl chr 7:100,495,054...100,512,653 		JBrowse link
G Rogdi rogdi homolog acts_upstream_of_or_within IMP (PMID:38172607) MGI PMID:38172607 NCBI chr16:4,826,593...4,831,438
Ensembl chr16:4,826,594...4,831,417 		JBrowse link
G Slc24a4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 involved_in IMP (MGI:5520028|PMID:23375655), (MGI:6716966|PMID:27752731) ARUK-UCL PMID:23375655 PMID:27752731 MGI:5520028 MGI:6716966 NCBI chr12:102,094,986...102,239,562
Ensembl chr12:102,094,992...102,233,350 		JBrowse link
G Slc4a2 solute carrier family 4 (anion exchanger), member 2 involved_in IDA (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chr 5:24,628,834...24,645,945
Ensembl chr 5:24,628,835...24,645,948 		JBrowse link
animal organ formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (PMID:17317769) MGI PMID:17317769 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:11062007) MGI PMID:11062007 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within IMP (PMID:16887115) MGI PMID:16887115 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635 		JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within IMP (PMID:7635047) MGI PMID:7635047 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within IMP (PMID:10449756) MGI PMID:10449756 NCBI chr 5:41,918,826...41,921,563
Ensembl chr 5:41,918,826...41,921,844 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:15013801) MGI PMID:15013801 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tlx1 T cell leukemia, homeobox 1 acts_upstream_of_or_within IMP (PMID:11356032) MGI PMID:11356032 NCBI chr19:45,138,531...45,145,382
Ensembl chr19:45,139,119...45,145,382 		JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen, type III, alpha 1 involved_in IMP (MGI:5307011|PMID:21071432) BHF-UCL PMID:21071432 MGI:5307011 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Efemp2 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 involved_in IMP (MGI:5660411|PMID:26178373), (MGI:6158865|PMID:26711913) UniProt PMID:26178373 PMID:26711913 MGI:5660411 MGI:6158865 NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545 		JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within IGI (PMID:19816508) MGI PMID:19816508 NCBI chr18:61,782,267...61,782,329
Ensembl chr18:61,782,267...61,782,329 		JBrowse link
G Mir145a microRNA 145a acts_upstream_of_or_within IGI (PMID:19816508) MGI PMID:19816508 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965 		JBrowse link
G Mylk myosin, light polypeptide kinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:34,565,569...34,822,806
Ensembl chr16:34,565,580...34,822,790 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
apoptotic process involved in endocardial cushion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in IMP (MGI:3814273|PMID:18924235) BHF-UCL PMID:18924235 MGI:3814273 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
apoptotic process involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IMP (PMID:17023674) MGI PMID:17023674 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:11784028) MGI PMID:11784028 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:16510504) MGI PMID:16510504 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
apoptotic process involved in mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of IMP (PMID:10363969) MGI PMID:10363969 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A acts_upstream_of IMP (PMID:15105443) MGI PMID:15105443 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor acts_upstream_of IMP (PMID:15178742) MGI PMID:15178742 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
apoptotic process involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc1 forkhead box C1 acts_upstream_of IGI (PMID:16839542) MGI PMID:16839542 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of IGI (PMID:16839542) MGI PMID:16839542 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
atrial cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in IEP (MGI:1332872|PMID:10072785) BHF-UCL PMID:10072785 MGI:1332872 NCBI chr 6:87,405,976...87,411,494
Ensembl chr 6:87,405,976...87,414,659 		JBrowse link
G Eng endoglin involved_in IMP (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:55,179,378...55,205,553
Ensembl chr14:55,179,378...55,204,384 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:11493526) MGI PMID:11493526 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Tnnt2 troponin T2, cardiac acts_upstream_of_or_within IMP (PMID:10449439) MGI PMID:10449439 NCBI chr 1:135,763,933...135,780,006
Ensembl chr 1:135,764,092...135,779,998 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of_or_within IMP (PMID:20159597) MGI PMID:20159597 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
atrial septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IMP (MGI:3851675|PMID:19409885) BHF-UCL PMID:19409885 MGI:3851675 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IMP (PMID:17023674) MGI PMID:17023674 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:10969038) MGI PMID:10969038 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Notch2 notch 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IGI (PMID:22898775) MGI PMID:22898775 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Tbx20 T-box 20 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within IGI (PMID:22898775) MGI PMID:22898775 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in IMP (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
atrial septum primum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in IMP
ISO		 (MGI:3610266|PMID:16140292) BHF-UCL
MGI		 PMID:16140292 GO_REF:0000119 MGI:3610266 MGI:4834177 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (MGI:3769320|PMID:17643447) BHF-UCL PMID:17643447 MGI:3769320 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:19483677) MGI PMID:19483677 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:3603061|PMID:16109771) BHF-UCL PMID:16109771 MGI:3603061 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347) BHF-UCL PMID:11390347 MGI:3609313 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
atrial septum secundum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:19483677) MGI PMID:19483677 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
atrial ventricular junction remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IGI (PMID:10969038) MGI PMID:10969038 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:10969038) MGI PMID:10969038 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 acts_upstream_of_or_within IMP (PMID:19363478) MGI PMID:19363478 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:20016102) MGI PMID:20016102 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within IMP (PMID:19936227) MGI PMID:19936227 NCBI chr14:110,984,770...110,992,640
Ensembl chr14:110,986,012...110,992,581 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within IMP (PMID:24302887) MGI PMID:24302887 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd24 ankyrin repeat domain 24 involved_in IMP (MGI:6885507|PMID:35175278) UniProt PMID:35175278 MGI:6885507 NCBI chr10:81,464,352...81,483,446
Ensembl chr10:81,464,374...81,483,444 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:11875276) MGI PMID:11875276 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Cdh23 cadherin related 23 (otocadherin) acts_upstream_of_or_within IMP
IGI		 (PMID:7610888), (PMID:8790740), (PMID:9039475)
(PMID:12121736)
(PMID:11138008), (PMID:17050716), (PMID:23217710)
(PMID:11322776)
(PMID:15537665)		 MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 More... NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269 		JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within IMP (PMID:17021174) MGI PMID:17021174 NCBI chr17:44,445,671...44,591,059
Ensembl chr17:44,445,659...44,591,059 		JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within IMP (PMID:19414487), (PMID:19423712) MGI PMID:19414487 PMID:19423712 NCBI chr 3:58,751,449...58,792,633
Ensembl chr 3:58,751,449...58,792,761 		JBrowse link
G Clrn2 clarin 2 involved_in IMP (MGI:6810803|PMID:33496845) UniProt PMID:33496845 MGI:6810803 NCBI chr 5:45,611,021...45,621,824
Ensembl chr 5:45,611,093...45,621,491 		JBrowse link
G Grxcr2 glutaredoxin, cysteine rich 2 acts_upstream_of_or_within IMP
IGI		 (PMID:30380417) MGI PMID:30380417 NCBI chr18:42,118,388...42,132,114
Ensembl chr18:42,118,388...42,132,114 		JBrowse link
G Lhfpl5 lipoma HMGIC fusion partner-like 5 acts_upstream_of_or_within IMP (PMID:15905332)
(PMID:17876667), (PMID:23217710)		 MGI PMID:15905332 PMID:17876667 PMID:23217710 NCBI chr17:28,794,330...28,802,567
Ensembl chr17:28,794,615...28,804,653 		JBrowse link
G Myo3a myosin IIIA involved_in IGI
IMP		 (PMID:26754646) MGI PMID:26754646 NCBI chr 2:22,232,360...22,508,693
Ensembl chr 2:22,232,314...22,508,264 		JBrowse link
G Myo3b myosin IIIB involved_in IGI
IMP		 (PMID:26754646) MGI PMID:26754646 NCBI chr 2:69,869,464...70,259,542
Ensembl chr 2:69,869,470...70,259,542 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within IMP (PMID:17050716)
(PMID:11753415)
(PMID:12121736)		 MGI PMID:11753415 PMID:12121736 PMID:17050716 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 acts_upstream_of_or_within IMP (PMID:24920589) MGI PMID:24920589 NCBI chr11:115,054,138...115,072,009
Ensembl chr11:115,054,167...115,072,007 		JBrowse link
G Pcdh15 protocadherin 15 acts_upstream_of_or_within IGI
IMP		 (PMID:15537665)
(PMID:10978835)
(PMID:23217710)
(PMID:11124469)
(PMID:16887306)		 MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569 		JBrowse link
G Pdzd7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:24334608) GO_Central
MGI		 PMID:24334608 GO_REF:0000033 NCBI chr19:45,015,346...45,048,273
Ensembl chr19:45,015,345...45,034,156 		JBrowse link
G Pls1 plastin 1 (I-isoform) involved_in IMP (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chr 9:95,634,695...95,727,359
Ensembl chr 9:95,634,695...95,727,364 		JBrowse link
G Rest RE1-silencing transcription factor involved_in IMP (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IMP (MGI:5789047|PMID:27269051) UniProt PMID:27269051 MGI:5789047 NCBI chr13:24,685,513...24,917,789
Ensembl chr13:24,685,508...24,917,799 		JBrowse link
G Scrib scribbled planar cell polarity acts_upstream_of_or_within IGI (PMID:20215345) MGI PMID:20215345 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP
IGI		 (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Sod1 superoxide dismutase 1, soluble acts_upstream_of_or_within IMP (PMID:10464373), (PMID:10466888) MGI PMID:10464373 PMID:10466888 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Strc stereocilin involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:5430850|PMID:21165971)
(PMID:30801007)
(PMID:18849963)		 UniProt
MGI		 PMID:18849963 PMID:21165971 PMID:30801007 MGI:5430850 NCBI chr 2:121,193,729...121,211,851
Ensembl chr 2:121,194,209...121,217,649 		JBrowse link
G Tecta tectorin alpha acts_upstream_of_or_within IGI (PMID:30801007) MGI PMID:30801007 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Tprn taperin involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:30380417) GO_Central
MGI		 PMID:30380417 GO_REF:0000033 NCBI chr 2:25,152,610...25,159,898
Ensembl chr 2:25,152,630...25,159,897 		JBrowse link
G Triobp TRIO and F-actin binding protein acts_upstream_of_or_within IMP (PMID:20510926) MGI PMID:20510926 NCBI chr15:78,831,924...78,890,069
Ensembl chr15:78,831,924...78,890,069 		JBrowse link
G Whrn whirlin involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:27117407) GO_Central
MGI		 PMID:27117407 GO_REF:0000033 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228 		JBrowse link
bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant acts_upstream_of_or_within IMP (PMID:8898228) MGI PMID:8898228 NCBI chr 9:22,038,023...22,047,042
Ensembl chr 9:22,038,023...22,047,007 		JBrowse link
G Actn3 actinin alpha 3 involved_in IMP (MGI:5291888|PMID:21784188) UniProt PMID:21784188 MGI:5291888 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937 		JBrowse link
G Atg9a autophagy related 9A involved_in IMP (MGI:5906103|PMID:27811852) UniProt PMID:27811852 MGI:5906103 NCBI chr 1:75,157,509...75,168,654
Ensembl chr 1:75,157,504...75,168,840 		JBrowse link
G Cdx1 caudal type homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:11784046) MGI PMID:11784046 NCBI chr18:61,151,934...61,169,292
Ensembl chr18:61,151,934...61,169,271 		JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within IMP (PMID:22280990) MGI PMID:22280990 NCBI chr 7:65,759,240...65,823,546
Ensembl chr 7:65,759,263...65,823,546 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:20549734) MGI PMID:20549734 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Col9a1 collagen, type IX, alpha 1 acts_upstream_of_or_within IGI (PMID:18191556) MGI PMID:18191556 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765 		JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within IGI (PMID:18191556) MGI PMID:18191556 NCBI chr 8:70,826,186...70,834,721
Ensembl chr 8:70,826,208...70,834,716 		JBrowse link
G Cst5 cystatin D involved_in IMP (PMID:16680148) MGI PMID:16680148 NCBI chr 2:149,247,242...149,252,217
Ensembl chr 2:149,246,977...149,252,213 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within IMP (PMID:24005908) MGI PMID:24005908 NCBI chr 4:144,618,712...144,654,214
Ensembl chr 4:144,619,397...144,654,779 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IMP (PMID:16330189) MGI PMID:16330189 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:20080592), (PMID:20404326) MGI PMID:20080592 PMID:20404326 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:10518547) MGI PMID:10518547 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 involved_in
acts_upstream_of_or_within		 IMP (MGI:4457789|PMID:20582225)
(PMID:19407216)		 BHF-UCL
MGI		 PMID:19407216 PMID:20582225 MGI:4457789 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Glg1 golgi apparatus protein 1 acts_upstream_of_or_within IMP (PMID:20530870) MGI PMID:20530870 NCBI chr 8:111,879,916...111,985,842
Ensembl chr 8:111,881,053...111,985,848 		JBrowse link
G Has2 hyaluronan synthase 2 acts_upstream_of_or_within IMP (PMID:21246657) MGI PMID:21246657 NCBI chr15:56,529,023...56,557,942
Ensembl chr15:56,529,023...56,557,935 		JBrowse link
G Hottip Hoxa distal transcript antisense RNA acts_upstream_of_or_within
involved_in		 IMP (PMID:25909911) MGI PMID:25909911 NCBI chr 6:52,239,760...52,244,588
Ensembl chr 6:52,239,760...52,244,588 		JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 involved_in IMP
IBA
ISO		 (MGI:5607401|PMID:20838829) UniProt
GO_Central
MGI		 PMID:20838829 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5607401 NCBI chr 7:140,528,871...140,530,156
Ensembl chr 7:140,528,871...140,530,204 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:21227999) MGI PMID:21227999 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 involved_in ISO (PMID:19673927), (PMID:20146170), (PMID:20630166) BHF-UCL PMID:19673927 PMID:20146170 PMID:20630166 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP MGI MGI:61254 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within IMP (PMID:11790802), (PMID:20530870) MGI PMID:11790802 PMID:20530870 NCBI chr19:5,790,928...5,808,564
Ensembl chr19:5,790,932...5,808,560 		JBrowse link
G Ltf lactotransferrin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:110,848,360...110,871,834
Ensembl chr 9:110,848,339...110,871,835 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:12489152), (PMID:16330189)
(PMID:17693062)		 MGI PMID:12489152 PMID:16330189 PMID:17693062 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:17693062) MGI PMID:17693062 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:3818159|PMID:17547533) UniProt PMID:17547533 MGI:3818159 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Pappa2 pappalysin 2 acts_upstream_of_or_within IMP (PMID:23457539) MGI PMID:23457539 NCBI chr 1:158,539,297...158,788,019
Ensembl chr 1:158,539,297...158,808,060 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within IMP (PMID:7607069) MGI PMID:7607069 NCBI chr 2:147,203,850...147,216,972
Ensembl chr 2:147,203,845...147,235,215 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IMP
IGI		 (PMID:11784046), (PMID:8388780) MGI PMID:8388780 PMID:11784046 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within IGI
IMP		 (PMID:20346937) MGI PMID:20346937 NCBI chr  X:138,680,430...138,683,102
Ensembl chr  X:138,680,298...138,683,102 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within IGI (PMID:20346937) MGI PMID:20346937 NCBI chr 9:86,897,590...86,902,494
Ensembl chr 9:86,897,590...86,901,970 		JBrowse link
G Sfrp4 secreted frizzled-related protein 4 involved_in IMP
ISO		 (MGI:5790095|PMID:27355534) UniProt
MGI		 PMID:27355534 GO_REF:0000119 MGI:4834177 MGI:5790095 NCBI chr13:19,807,345...19,816,995
Ensembl chr13:19,807,274...19,817,164 		JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:9284043) MGI PMID:9284043 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Sp5 trans-acting transcription factor 5 acts_upstream_of_or_within IGI (PMID:11071760) MGI PMID:11071760 NCBI chr 2:70,305,267...70,308,070
Ensembl chr 2:70,305,267...70,308,073 		JBrowse link
G T brachyury, T-box transcription factor T acts_upstream_of_or_within IGI (PMID:11071760) MGI PMID:11071760 NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:80519|PMID:8622766) UniProt PMID:8622766 MGI:80519 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
bone trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen, type I, alpha 1 acts_upstream_of_or_within IGI (PMID:17440987) MGI PMID:17440987 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:22359666) MGI PMID:22359666 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Fbn2 fibrillin 2 involved_in IMP (MGI:4836762|PMID:20855508) BHF-UCL PMID:20855508 MGI:4836762 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within IGI (PMID:17440987) MGI PMID:17440987 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IMP (PMID:10742104) MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Ppargc1b peroxisome proliferative activated receptor, gamma, coactivator 1 beta involved_in IMP (MGI:3838421|PMID:19252502) DFLAT PMID:19252502 MGI:3838421 NCBI chr18:61,424,516...61,533,846
Ensembl chr18:61,431,207...61,533,502 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within IMP (PMID:14976225) MGI PMID:14976225 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
G Thbs3 thrombospondin 3 acts_upstream_of_or_within IMP (PMID:15964815) MGI PMID:15964815 NCBI chr 3:89,122,470...89,134,148
Ensembl chr 3:89,122,487...89,134,144 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within IMP (PMID:22886301) MGI PMID:22886301 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IMP (PMID:15728361) MGI PMID:15728361 NCBI chr15:98,668,593...98,676,093
Ensembl chr15:98,668,593...98,676,031 		JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412 		JBrowse link
G Akt3 thymoma viral proto-oncogene 3 acts_upstream_of_or_within IMP (PMID:15713641) MGI PMID:15713641 NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within IGI (PMID:25100583) MGI PMID:25100583 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303 		JBrowse link
G Ctnna2 catenin alpha 2 involved_in IMP (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) UniProt PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr 6:76,858,620...77,956,798
Ensembl chr 6:76,858,620...77,956,682 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within IGI (PMID:25100583)
(PMID:23178126)		 MGI PMID:23178126 PMID:25100583 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Fancc Fanconi anemia, complementation group C acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr13:63,452,519...63,645,126
Ensembl chr13:63,432,857...63,645,092 		JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr 6:113,508,622...113,573,981
Ensembl chr 6:113,508,643...113,573,978 		JBrowse link
G Fbxw11 F-box and WD-40 domain protein 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:32,592,595...32,696,816
Ensembl chr11:32,592,724...32,696,816 		JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within IGI (PMID:24483844) MGI PMID:24483844 NCBI chr10:42,057,841...42,152,691
Ensembl chr10:42,057,837...42,152,751 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within IMP (PMID:17954912) MGI PMID:17954912 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP (PMID:21857657) MGI PMID:21857657 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190 		JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:18032602) MGI PMID:18032602 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309 		JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:30503862) MGI PMID:30503862 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:74,564,775...74,615,210
Ensembl chr11:74,564,775...74,615,496 		JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pcnt pericentrin (kendrin) acts_upstream_of_or_within IMP (PMID:20096683) MGI PMID:20096683 NCBI chr10:76,187,098...76,279,988
Ensembl chr10:76,187,097...76,278,620 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:17614943) MGI PMID:17614943 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within IGI (PMID:17614943) MGI PMID:17614943 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464 		JBrowse link
G Slc4a10 solute carrier family 4, sodium bicarbonate cotransporter-like, member 10 acts_upstream_of_or_within IMP (PMID:18165320) MGI PMID:18165320 NCBI chr 2:61,876,815...62,157,087
Ensembl chr 2:61,876,806...62,157,074 		JBrowse link
G Slc6a4 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 involved_in IMP (MGI:3832995|PMID:19208814) CACAO PMID:19208814 MGI:3832995 NCBI chr11:76,889,423...76,923,169
Ensembl chr11:76,889,429...76,923,166 		JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within IMP (PMID:21715716) MGI PMID:21715716 NCBI chr15:9,578,279...9,748,954
Ensembl chr15:9,578,279...9,748,954 		JBrowse link
G Vps51 VPS51 GARP complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:6,117,872...6,127,217
Ensembl chr19:6,117,872...6,127,261 		JBrowse link
G Zfp335 zinc finger protein 335 acts_upstream_of_or_within IMP
IGI		 (PMID:23178126) MGI PMID:23178126 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677 		JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IMP (PMID:18614704) MGI PMID:18614704 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
branch elongation involved in salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15972105) MGI PMID:15972105 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IGI
IMP		 (PMID:15972105) MGI PMID:15972105 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:38,971,725...39,062,532
Ensembl chr18:38,971,726...39,062,525 		JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btrc beta-transducin repeat containing protein acts_upstream_of_or_within IMP (PMID:15340078) MGI PMID:15340078 NCBI chr19:45,352,119...45,521,782
Ensembl chr19:45,352,173...45,518,452 		JBrowse link
G Ccl11 C-C motif chemokine ligand 11 acts_upstream_of_or_within IMP (PMID:10804170) MGI PMID:10804170 NCBI chr11:81,948,658...81,953,781
Ensembl chr11:81,948,649...81,953,781 		JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) acts_upstream_of_or_within IMP (PMID:10804170) MGI PMID:10804170 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785 		JBrowse link
G Ddr1 discoidin domain receptor family, member 1 acts_upstream_of_or_within IMP (PMID:11283268) MGI PMID:11283268 NCBI chr17:35,992,459...36,015,633
Ensembl chr17:35,992,459...36,015,513 		JBrowse link
G Epha2 Eph receptor A2 involved_in IMP (MGI:5284750|PMID:19321667) UniProt PMID:19321667 MGI:5284750 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
G Etv4 ets variant 4 acts_upstream_of_or_within IDA
IMP		 (PMID:12871699)
(PMID:18977342)		 MGI PMID:12871699 PMID:18977342 NCBI chr11:101,660,573...101,677,963
Ensembl chr11:101,660,568...101,676,197 		JBrowse link
G Kdm5b lysine demethylase 5B acts_upstream_of_or_within IMP (PMID:24802759) MGI PMID:24802759 NCBI chr 1:134,487,916...134,560,621
Ensembl chr 1:134,487,909...134,563,023 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IMP (PMID:16973609) MGI PMID:16973609 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:19503830) MGI PMID:19503830 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IMP (PMID:10742104) MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Pml promyelocytic leukemia acts_upstream_of_or_within IMP (PMID:19261859) MGI PMID:19261859 NCBI chr 9:58,125,359...58,157,077
Ensembl chr 9:58,125,359...58,157,069 		JBrowse link
G Slc12a2 solute carrier family 12, member 2 acts_upstream_of_or_within IMP (PMID:8864124) MGI PMID:8864124 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893 		JBrowse link
G Src Rous sarcoma oncogene acts_upstream_of_or_within IMP (PMID:16007215) MGI PMID:16007215 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:16222716) MGI PMID:16222716 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
branching involved in pancreas morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prox1 prospero homeobox 1 acts_upstream_of_or_within IMP (PMID:22178591) MGI PMID:22178591 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
branching involved in prostate gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:11401393) MGI PMID:11401393 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Cd44 CD44 antigen acts_upstream_of_or_within IMP (PMID:9374396) MGI PMID:9374396 NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010 		JBrowse link
G Fem1b fem 1 homolog b acts_upstream_of_or_within IMP (PMID:18816836) MGI PMID:18816836 NCBI chr 9:62,699,106...62,718,930
Ensembl chr 9:62,699,103...62,719,216 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:17215304)
(PMID:12666202), (PMID:17202188)		 MGI PMID:12666202 PMID:17202188 PMID:17215304 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within IMP (PMID:10210434) MGI PMID:10210434 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788 		JBrowse link
G Nkx3-1 NK3 homeobox 1 acts_upstream_of_or_within IMP (PMID:11002344)
(PMID:10215624)
(PMID:10906459)		 MGI PMID:10215624 PMID:10906459 PMID:11002344 NCBI chr14:69,428,141...69,432,107
Ensembl chr14:69,428,087...69,432,111 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10208740) MGI PMID:10208740 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
branching involved in salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:11731698) MGI PMID:11731698 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within IMP (PMID:11798066) MGI PMID:11798066 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within IGI (PMID:26371508) MGI PMID:26371508 NCBI chr 4:11,331,933...11,386,783
Ensembl chr 4:11,331,933...11,386,783 		JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 acts_upstream_of_or_within IGI (PMID:26371508) MGI PMID:26371508 NCBI chr 8:106,856,658...106,863,825
Ensembl chr 8:106,856,951...106,863,606 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IDA
IGI		 (PMID:18559345)
(PMID:15972105)		 MGI PMID:15972105 PMID:18559345 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf7 fibroblast growth factor 7 acts_upstream_of_or_within IDA (PMID:18559345) MGI PMID:18559345 NCBI chr 2:125,876,578...125,933,105
Ensembl chr 2:125,876,578...125,933,105 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI
IMP		 (PMID:15042696)
(PMID:15063181)		 MGI PMID:15042696 PMID:15063181 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:12421715), (PMID:18559345) MGI PMID:12421715 PMID:18559345 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within IMP
IDA		 (PMID:11275690) MGI PMID:11275690 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Lama1 laminin, alpha 1 acts_upstream_of_or_within IMP (PMID:11798066) MGI PMID:11798066 NCBI chr17:68,004,129...68,129,640
Ensembl chr17:68,004,254...68,129,642 		JBrowse link
G Lama5 laminin, alpha 5 acts_upstream_of_or_within IMP (PMID:14568553) MGI PMID:14568553 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide acts_upstream_of_or_within IMP (PMID:18559345) MGI PMID:18559345 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IGI
IMP		 (PMID:15042696) MGI PMID:15042696 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tgm2 transglutaminase 2, C polypeptide acts_upstream_of_or_within IMP (PMID:15970210) MGI PMID:15970210 NCBI chr 2:157,958,325...157,988,312
Ensembl chr 2:157,958,322...157,988,356 		JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 acts_upstream_of_or_within IMP (PMID:23661704) MGI PMID:23661704 NCBI chr13:70,875,917...70,989,956
Ensembl chr13:70,875,921...70,989,930 		JBrowse link
G Agt angiotensinogen NOT|acts_upstream_of_or_within IMP
IDA		 (PMID:8675666)
(PMID:12657564)		 MGI PMID:8675666 PMID:12657564 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IGI
IDA		 (PMID:16672320)
(PMID:14699151)		 MGI PMID:14699151 PMID:16672320 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IGI (PMID:15925496) MGI PMID:15925496 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 ISO
IGI		 (PMID:17522159) MGI PMID:17522159 GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Cd44 CD44 antigen acts_upstream_of_or_within IMP (PMID:10926769) MGI PMID:10926769 NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in
NOT|involved_in		 ISO
IMP		 PMID:15843474
(MGI:3717986|PMID:17615577)		 UniProt
UniProt		 PMID:15843474 PMID:17615577 MGI:3717986 RGD:8554075 NCBI chr  X:101,290,984...101,295,787
Ensembl chr  X:101,290,987...101,295,787 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 NOT|involved_in IMP (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:17537789) MGI PMID:17537789 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ctnnbip1 catenin beta interacting protein 1 acts_upstream_of_or_within IMP (PMID:17803964) MGI PMID:17803964 NCBI chr 4:149,602,698...149,650,894
Ensembl chr 4:149,602,693...149,650,894 		JBrowse link
G Dchs1 dachsous cadherin related 1 acts_upstream_of_or_within IMP (PMID:21303848) MGI PMID:21303848 NCBI chr 7:105,402,196...105,437,562
Ensembl chr 7:105,402,197...105,436,861 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within IMP (PMID:16105026)
(PMID:17172448)
(PMID:17435047)		 MGI PMID:16105026 PMID:17172448 PMID:17435047 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:16937369) MGI PMID:16937369 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IGI (PMID:12783782) MGI PMID:12783782 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within IMP (PMID:21303848) MGI PMID:21303848 NCBI chr 3:38,939,867...39,066,134
Ensembl chr 3:38,941,089...39,066,134 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16049111) MGI PMID:16049111 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Foxd1 forkhead box D1 acts_upstream_of_or_within IDA (PMID:13678594) MGI PMID:13678594 NCBI chr13:98,490,753...98,493,213
Ensembl chr13:98,490,750...98,495,813 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IMP
IDA		 (MGI:81287|PMID:8657307)
(PMID:13678594), (PMID:21281623)		 UniProt
MGI		 PMID:8657307 PMID:13678594 PMID:21281623 MGI:81287 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:16396903) MGI PMID:16396903 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within IGI (PMID:15925496) MGI PMID:15925496 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Greb1l growth regulation by estrogen in breast cancer-like acts_upstream_of_or_within IMP (PMID:29100091) MGI PMID:29100091 NCBI chr18:10,324,933...10,562,945
Ensembl chr18:10,325,177...10,562,940 		JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 acts_upstream_of_or_within IMP (PMID:14522971) MGI PMID:14522971 NCBI chr 2:148,521,305...148,534,869
Ensembl chr 2:148,522,943...148,534,869 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:11493536) MGI PMID:11493536 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:11493536) MGI PMID:11493536 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hs3st3a1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 involved_in IGI (PMID:32017326) MGI PMID:32017326 NCBI chr11:64,326,158...64,413,667
Ensembl chr11:64,326,158...64,413,667 		JBrowse link
G Hs3st3b1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 involved_in IGI (PMID:32017326) MGI PMID:32017326 NCBI chr11:63,775,519...63,813,110
Ensembl chr11:63,776,618...63,813,116 		JBrowse link
G Ilk integrin linked kinase acts_upstream_of_or_within IDA (PMID:15831470) MGI PMID:15831470 NCBI chr 7:105,385,797...105,392,132
Ensembl chr 7:105,385,799...105,392,132 		JBrowse link
G Lama5 laminin, alpha 5 acts_upstream_of_or_within IMP (PMID:14568553) MGI PMID:14568553 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IEP (MGI:5050079|PMID:7909549) UniProt PMID:7909549 MGI:5050079 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Myc myelocytomatosis oncogene involved_in IMP (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G Npnt nephronectin acts_upstream_of_or_within IMP (PMID:17537792) MGI PMID:17537792 NCBI chr 3:132,587,506...132,656,052
Ensembl chr 3:132,587,506...132,656,052 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (PMID:1337742)
(PMID:16672320)		 UniProt
MGI		 PMID:1337742 PMID:16672320 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) UniProt PMID:1337742 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 acts_upstream_of_or_within IDA (PMID:12591246) MGI PMID:12591246 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pgf placental growth factor acts_upstream_of_or_within IDA (PMID:13678594) MGI PMID:13678594 NCBI chr12:85,213,413...85,224,087
Ensembl chr12:85,213,409...85,224,564 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Pspn persephin acts_upstream_of_or_within IDA (PMID:9491986) MGI PMID:9491986 NCBI chr17:57,306,253...57,307,105
Ensembl chr17:57,306,457...57,307,018 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (PMID:19809516) MGI PMID:19809516 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in
acts_upstream_of		 IMP (MGI:2447943|PMID:12482961)
(PMID:24550112)		 UniProt
MGI		 PMID:12482961 PMID:24550112 MGI:2447943 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:16396903) MGI PMID:16396903 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:12783782) MGI PMID:12783782 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within IGI (PMID:15925496) MGI PMID:15925496 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IEP (MGI:83252|PMID:8787755) UniProt PMID:8787755 MGI:83252 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tcf21 transcription factor 21 acts_upstream_of_or_within IMP (PMID:10572052)
(PMID:9507058)		 MGI PMID:9507058 PMID:10572052 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Timeless timeless circadian clock 1 acts_upstream_of_or_within
involved_in		 ISO RGD
MGI		 PMID:10963667 GO_REF:0000008 GO_REF:0000096 MGI:4417868 RGD:2308864 NCBI chr10:128,067,932...128,088,810
Ensembl chr10:128,067,934...128,088,810 		JBrowse link
G Tmem59l transmembrane protein 59-like involved_in IMP (PMID:32017326) MGI PMID:32017326 NCBI chr 8:70,936,505...70,939,998
Ensembl chr 8:70,936,517...70,940,008 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IGI (PMID:16054034) MGI PMID:16054034 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP (PMID:16054034) MGI PMID:16054034 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
G Wnt6 wingless-type MMTV integration site family, member 6 acts_upstream_of_or_within IGI (PMID:11948913) MGI PMID:11948913 NCBI chr 1:74,793,499...74,824,481
Ensembl chr 1:74,811,051...74,824,481 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP
IGI		 (PMID:16054034) MGI PMID:16054034 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
G Wt1 WT1 transcription factor involved_in IMP
ISO		 (MGI:1333093|PMID:10101119) UniProt
MGI		 PMID:10101119 GO_REF:0000119 MGI:1333093 MGI:4834177 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
bronchus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:18990706) MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674) MGI PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (PMID:18367557) MGI PMID:18367557 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI (PMID:21764747) MGI PMID:21764747 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16989802) MGI PMID:16989802 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within IGI (PMID:21764747) MGI PMID:21764747 NCBI chr 3:37,694,096...37,698,748
Ensembl chr 3:37,694,096...37,698,747 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within IGI (PMID:21764747) MGI PMID:21764747 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253 		JBrowse link
G Yap1 yes-associated protein 1 acts_upstream_of_or_within IMP (PMID:25043473) MGI PMID:25043473 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597 		JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:9731532) MGI PMID:9731532 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tmtc3 transmembrane and tetratricopeptide repeat containing 3 acts_upstream_of_or_within IMP (PMID:21956870) MGI PMID:21956870 NCBI chr10:100,279,764...100,323,230
Ensembl chr10:100,279,764...100,323,212 		JBrowse link
G Tnc tenascin C involved_in ISO RGD
MGI		 PMID:16928692 GO_REF:0000096 MGI:4417868 RGD:4889612 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252 		JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within IMP (PMID:27687499) MGI PMID:27687499 NCBI chr 6:92,749,680...92,921,431
Ensembl chr 6:92,749,680...92,920,473 		JBrowse link
G Aqp1 aquaporin 1 acts_upstream_of_or_within IMP (PMID:11891232) MGI PMID:11891232 NCBI chr 6:55,313,284...55,325,540
Ensembl chr 6:55,313,417...55,325,540 		JBrowse link
G Aqp5 aquaporin 5 acts_upstream_of_or_within IMP (PMID:11891232) MGI PMID:11891232 NCBI chr15:99,488,909...99,492,710
Ensembl chr15:99,488,663...99,492,710 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:9268572) MGI PMID:9268572 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:16154126)
(PMID:16854970)		 MGI PMID:16154126 PMID:16854970 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Col8a1 collagen, type VIII, alpha 1 acts_upstream_of_or_within IGI (PMID:16051690) MGI PMID:16051690 NCBI chr16:57,444,619...57,575,100
Ensembl chr16:57,444,621...57,575,100 		JBrowse link
G Col8a2 collagen, type VIII, alpha 2 acts_upstream_of_or_within IGI (PMID:16051690) MGI PMID:16051690 NCBI chr 4:126,180,613...126,208,123
Ensembl chr 4:126,180,586...126,208,123 		JBrowse link
G Ephb1 Eph receptor B1 acts_upstream_of_or_within IMP (PMID:12971893) MGI PMID:12971893 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892 		JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within IMP (PMID:12971893) MGI PMID:12971893 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in IMP (PMID:26114487) MGI PMID:26114487 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within IMP (PMID:15976303) MGI PMID:15976303 NCBI chr10:128,716,393...128,727,587
Ensembl chr10:128,718,164...128,727,587 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:8387379) MGI PMID:8387379 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:124,716,146...124,718,032
Ensembl chr 6:124,716,146...124,718,337 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IGI (PMID:22627278) MGI PMID:22627278 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in IMP (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Mfn2 mitofusin 2 acts_upstream_of_or_within IMP (PMID:16104381) MGI PMID:16104381 NCBI chr 4:147,958,043...147,989,527
Ensembl chr 4:147,958,056...147,989,161 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:15728677) MGI PMID:15728677 NCBI chr 9:43,655,251...43,718,758
Ensembl chr 9:43,655,281...43,743,955 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:7926784) MGI PMID:7926784 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within IGI (PMID:16624538) MGI PMID:16624538 NCBI chr17:34,239,766...34,243,654
Ensembl chr17:34,239,766...34,243,654 		JBrowse link
G Scrib scribbled planar cell polarity involved_in TAS (PMID:26114487) MGI PMID:26114487 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Shroom2 shroom family member 2 involved_in ISS (MGI:3710716|PMID:16987870) UniProt PMID:16987870 MGI:3710716 NCBI chr  X:151,392,505...151,553,784
Ensembl chr  X:151,392,505...151,552,461 		JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:17003410) MGI PMID:17003410 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Tenm3 teneurin transmembrane protein 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:48,678,700...51,370,255
Ensembl chr 8:48,680,717...49,296,986 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within IMP (PMID:16251428) MGI PMID:16251428 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within IGI
IMP		 (PMID:22627278) MGI PMID:22627278 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within IGI (PMID:16624538) MGI PMID:16624538 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prom1 prominin 1 involved_in IMP
IBA
ISO		 (MGI:3838023|PMID:19228982) UniProt
GO_Central
MGI		 PMID:19228982 GO_REF:0000033 GO_REF:0000119 MGI:3838023 MGI:4834177 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374 		JBrowse link
G Rom1 rod outer segment membrane protein 1 acts_upstream_of_or_within IMP (PMID:20300562) MGI PMID:20300562 NCBI chr19:8,904,746...8,906,720
Ensembl chr19:8,904,755...8,906,720 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IDA (MGI:5693671|PMID:26287463) UniProt PMID:26287463 MGI:5693671 NCBI chr11:113,667,200...113,957,855
Ensembl chr11:113,667,200...113,957,872 		JBrowse link
G Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 acts_upstream_of_or_within IMP (PMID:12808454) MGI PMID:12808454 NCBI chr14:7,669,819...7,766,808
Ensembl chr14:7,669,823...7,767,484 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within IMP (PMID:21646512) MGI PMID:21646512 NCBI chr12:98,886,796...98,949,509
Ensembl chr12:98,886,833...98,949,497 		JBrowse link
G Vax2os ventral anterior homeobox 2, opposite strand acts_upstream_of_or_within IMP (PMID:22128341) MGI PMID:22128341 NCBI chr 6:83,669,786...83,689,183
Ensembl chr 6:83,669,788...83,689,183 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:18582859) MGI PMID:18582859 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
cardiac atrium formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IMP (MGI:3640731|PMID:16730346) BHF-UCL PMID:16730346 MGI:3640731 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
cardiac atrium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccm2l cerebral cavernous malformation 2-like acts_upstream_of_or_within IGI (PMID:22898778) MGI PMID:22898778 NCBI chr 2:152,907,857...152,923,655
Ensembl chr 2:152,907,875...152,923,655 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in IMP (MGI:3056036|PMID:15466159) BHF-UCL PMID:15466159 MGI:3056036 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443 		JBrowse link
G Eng endoglin involved_in IMP (MGI:4368063|PMID:19703439) BHF-UCL PMID:19703439 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within IMP
IGI		 (PMID:19151727)
(PMID:22898778)		 MGI PMID:19151727 PMID:22898778 NCBI chr16:33,504,754...33,591,946
Ensembl chr16:33,504,740...33,591,946 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4837019|PMID:20890042) BHF-UCL PMID:20890042 MGI:4837019 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:17372176) MGI PMID:17372176 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IMP (PMID:9030684) MGI PMID:9030684 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882 		JBrowse link
cardiac chamber formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A involved_in IMP (PMID:20929948) MGI PMID:20929948 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4837019|PMID:20890042) BHF-UCL PMID:20890042 MGI:4837019 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Tbx20 T-box 20 involved_in
acts_upstream_of_or_within		 IMP (MGI:3579960|PMID:15901664)
(PMID:19661464)		 BHF-UCL
MGI		 PMID:15901664 PMID:19661464 MGI:3579960 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
cardiac epithelial to mesenchymal transition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam15 ADAM metallopeptidase domain 15 acts_upstream_of_or_within IMP (PMID:19156209) MGI PMID:19156209 NCBI chr 3:89,246,947...89,257,589
Ensembl chr 3:89,245,849...89,257,303 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Rtn4 reticulon 4 acts_upstream_of_or_within IMP (PMID:19156209) MGI PMID:19156209 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Tbx3 T-box 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
G Wnt16 wingless-type MMTV integration site family, member 16 acts_upstream_of_or_within IMP (PMID:19156209) MGI PMID:19156209 NCBI chr 6:22,288,179...22,298,521
Ensembl chr 6:22,288,226...22,298,521 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of_or_within IMP (PMID:20159597) MGI PMID:20159597 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
cardiac left ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Pcdha9 protocadherin alpha 9 acts_upstream_of_or_within ISO (PMID:34888534) MGI PMID:34888534 NCBI chr18:37,130,933...37,320,710
Ensembl chr18:37,130,933...37,320,710 		JBrowse link
G Tbx5 T-box 5 involved_in IMP
IBA		 (MGI:4356350|PMID:19727199) BHF-UCL
GO_Central		 PMID:19727199 GO_REF:0000033 MGI:4356350 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
cardiac left ventricle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl-hydrocarbon receptor involved_in IMP (MGI:3760685|PMID:14644620) DFLAT PMID:14644620 MGI:3760685 NCBI chr12:35,547,978...35,584,988
Ensembl chr12:35,547,973...35,585,037 		JBrowse link
G Cpe carboxypeptidase E involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:65,045,576...65,146,143
Ensembl chr 8:65,045,576...65,146,088 		JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Foxf1 forkhead box F1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in IMP (MGI:4829580|PMID:20516643) BHF-UCL PMID:20516643 MGI:4829580 NCBI chr 7:24,927,683...24,937,276
Ensembl chr 7:24,927,683...24,937,276 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4837019|PMID:20890042) BHF-UCL PMID:20890042 MGI:4837019 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391 		JBrowse link
G Npy5r neuropeptide Y receptor Y5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:67,132,617...67,140,746
Ensembl chr 8:67,132,617...67,140,780 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:5437413|PMID:21493891) BHF-UCL PMID:21493891 MGI:5437413 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Rnls renalase, FAD-dependent amine oxidase acts_upstream_of_or_within IMP (PMID:21178975) MGI PMID:21178975 NCBI chr19:33,115,140...33,369,695
Ensembl chr19:33,115,147...33,369,665 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:4821522|PMID:20652948) BHF-UCL PMID:20652948 MGI:4821522 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
cardiac muscle tissue growth involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in IMP (MGI:5049789|PMID:21668976) UniProt PMID:21668976 MGI:5049789 NCBI chr 3:115,504,082...115,508,704
Ensembl chr 3:115,504,082...115,508,721 		JBrowse link
cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within IMP (PMID:14605248) MGI PMID:14605248 NCBI chr 2:113,877,763...113,883,356
Ensembl chr 2:113,877,763...113,884,029 		JBrowse link
G Angpt1 angiopoietin 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr15:42,288,063...42,540,373
Ensembl chr15:42,288,119...42,540,373 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:36,089,365...36,097,244
Ensembl chr19:36,089,361...36,097,499 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IMP (PMID:16314491) MGI PMID:16314491 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 acts_upstream_of_or_within IMP (PMID:16966370) MGI PMID:16966370 NCBI chr 8:125,635,325...125,676,063
Ensembl chr 8:125,635,326...125,676,063 		JBrowse link
G Epo erythropoietin involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504 		JBrowse link
G Epor erythropoietin receptor involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mylk2 myosin, light polypeptide kinase 2, skeletal muscle involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:152,753,265...152,764,985
Ensembl chr 2:152,753,272...152,764,988 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IMP
ISO		 (MGI:5285465|PMID:21640717) BHF-UCL
MGI		 PMID:21640717 GO_REF:0000119 MGI:4834177 MGI:5285465 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4947514|PMID:20007915) BHF-UCL PMID:20007915 MGI:4947514 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3604925|PMID:15843409) BHF-UCL PMID:15843409 MGI:3604925 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tcap titin-cap involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:98,274,637...98,275,779
Ensembl chr11:98,274,637...98,275,779 		JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:17360664) MGI PMID:17360664 GO_REF:0000119 MGI:4834177 NCBI chr 2:76,534,324...76,812,901
Ensembl chr 2:76,534,324...76,812,891 		JBrowse link
G Xirp2 xin actin-binding repeat containing 2 acts_upstream_of_or_within IMP (PMID:20360251) MGI PMID:20360251 NCBI chr 2:67,276,343...67,356,964
Ensembl chr 2:67,004,178...67,356,959 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in IMP (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in TAS (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr15:40,518,438...40,967,988
Ensembl chr15:40,518,431...40,967,988 		JBrowse link
cardiac neural crest cell development involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:21098571) MGI PMID:21098571 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IMP (MGI:4413411|PMID:19008477) BHF-UCL PMID:19008477 MGI:4413411 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:19609448) MGI PMID:19609448 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Jag1 jagged 1 involved_in IMP (MGI:4359139|PMID:19509466) BHF-UCL PMID:19509466 MGI:4359139 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Mir452 microRNA 452 acts_upstream_of_or_within IDA (PMID:21098571) MGI PMID:21098571 NCBI chr  X:71,305,830...71,305,914
Ensembl chr  X:71,305,830...71,305,914 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:18539270) MGI PMID:18539270 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in IMP (PMID:31219639) MGI PMID:31219639 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Edn1 endothelin 1 involved_in IDA (PMID:31219639) MGI PMID:31219639 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
G Ednra endothelin receptor type A involved_in IMP (PMID:31219639) MGI PMID:31219639 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Folr1 folate receptor alpha involved_in IMP (MGI:3721767|PMID:17286298) BHF-UCL PMID:17286298 MGI:3721767 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:20144608) MGI PMID:20144608 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Nrp1 neuropilin 1 NOT|involved_in IMP (MGI:5693177|PMID:26053665) BHF-UCL PMID:26053665 MGI:5693177 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in IMP (MGI:2446944|PMID:12464179) BHF-UCL PMID:12464179 MGI:2446944 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:18539270) MGI PMID:18539270 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
cardiac right atrium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch 1 involved_in IMP (MGI:4947514|PMID:20007915) BHF-UCL PMID:20007915 MGI:4947514 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in IMP (MGI:3836832|PMID:19166829) BHF-UCL PMID:19166829 MGI:3836832 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
cardiac right ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IMP (MGI:1926848|PMID:11076755) BHF-UCL PMID:11076755 MGI:1926848 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:19620969) MGI PMID:19620969 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 acts_upstream_of_or_within IMP (PMID:17519332) MGI PMID:17519332 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409 		JBrowse link
cardiac right ventricle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in IMP (MGI:3814273|PMID:18924235) BHF-UCL PMID:18924235 MGI:3814273 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Gata3 GATA binding protein 3 involved_in IMP (MGI:3832106|PMID:18955134) UniProt PMID:18955134 MGI:3832106 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (MGI:3769320|PMID:17643447) BHF-UCL PMID:17643447 MGI:3769320 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in TAS (PMID:27783597) MGI PMID:27783597 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hand2os1 Hand2, opposite strand 1 acts_upstream_of_or_within_positive_effect IMP (PMID:27783597) MGI PMID:27783597 NCBI chr 8:57,757,296...57,773,894
Ensembl chr 8:57,734,152...57,777,268 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Jag1 jagged 1 involved_in IMP (MGI:4359139|PMID:19509466) BHF-UCL PMID:19509466 MGI:4359139 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like acts_upstream_of_or_within IMP (PMID:15661756) MGI PMID:15661756 NCBI chr 7:19,093,639...19,112,465
Ensembl chr 7:19,093,674...19,112,458 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C involved_in IEP (MGI:4355631|PMID:19666519) BHF-UCL PMID:19666519 MGI:4355631 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:3603061|PMID:16109771) BHF-UCL PMID:16109771 MGI:3603061 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3604925|PMID:15843409) BHF-UCL PMID:15843409 MGI:3604925 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP
TAS		 (MGI:894212|PMID:9217007)
(MGI:4943617|PMID:20299672)		 BHF-UCL
DFLAT		 PMID:9217007 PMID:20299672 MGI:4943617 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
cardiac septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:26102480) MGI PMID:26102480 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:11694877) MGI PMID:11694877 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within IMP (PMID:24005908) MGI PMID:24005908 NCBI chr 4:144,618,712...144,654,214
Ensembl chr 4:144,619,397...144,654,779 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within IMP (PMID:27340223) MGI PMID:27340223 NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IMP (MGI:3703467|PMID:17259303) BHF-UCL PMID:17259303 MGI:3703467 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:3703467|PMID:17259303) BHF-UCL PMID:17259303 MGI:3703467 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:19036983) MGI PMID:19036983 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Jag1 jagged 1 involved_in IMP (MGI:4359139|PMID:19509466) BHF-UCL PMID:19509466 MGI:4359139 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 acts_upstream_of_or_within IGI (PMID:22821713) MGI PMID:22821713 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (PMID:27340223) MGI PMID:27340223 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IMP (MGI:3773736|PMID:16510504) ComplexPortal PMID:16510504 MGI:3773736 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4947514|PMID:20007915) BHF-UCL PMID:20007915 MGI:4947514 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IGI (PMID:22821713) MGI PMID:22821713 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
cardiac ventricle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:3830899|PMID:16680724)
(PMID:19035347)		 UniProt
MGI		 PMID:16680724 PMID:19035347 MGI:3830899 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IGI (PMID:19035347) MGI PMID:19035347 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
cardiac ventricle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 involved_in IMP (MGI:3056036|PMID:15466159) BHF-UCL PMID:15466159 MGI:3056036 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443 		JBrowse link
G Eng endoglin involved_in IMP (MGI:4368063|PMID:19703439) BHF-UCL PMID:19703439 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:21377456) MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IMP (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:3603871|PMID:16199874) UniProt PMID:16199874 MGI:3603871 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like involved_in IMP (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:9436976) MGI PMID:9436976 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:16510504) MGI PMID:16510504 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:5298073|PMID:21311046) BHF-UCL PMID:21311046 MGI:5298073 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
cardioblast anterior-lateral migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
cardioblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 acts_upstream_of_or_within IMP (PMID:10393122) MGI PMID:10393122 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
cardioblast migration to the midline involved in heart field formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
cardiogenic plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY (sex determining region Y)-box 17 involved_in IMP (MGI:4946573|PMID:21305474) BHF-UCL PMID:21305474 MGI:4946573 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
cartilage condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan acts_upstream_of_or_within IMP (PMID:3070812) MGI PMID:3070812 NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847 		JBrowse link
G Barx2 BarH-like homeobox 2 acts_upstream_of_or_within IDA
IMP		 (PMID:15800003) MGI PMID:15800003 NCBI chr 9:31,757,340...31,824,581
Ensembl chr 9:31,757,340...31,824,758 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor, type 1B acts_upstream_of_or_within IMP (PMID:10631181) MGI PMID:10631181 NCBI chr 3:141,540,230...141,875,335
Ensembl chr 3:141,542,897...141,875,186 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within IDA (PMID:15305294) MGI PMID:15305294 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581 		JBrowse link
G Chad chondroadherin ISO RGD PMID:9461555 RGD:69806 NCBI chr11:94,455,873...94,459,953
Ensembl chr11:94,455,873...94,459,953 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:3070812) MGI PMID:3070812 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:3070812) MGI PMID:3070812 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IGI (PMID:8565825) MGI PMID:8565825 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Fgf6 fibroblast growth factor 6 acts_upstream_of_or_within IGI (PMID:8565825) MGI PMID:8565825 NCBI chr 6:126,992,505...127,001,681
Ensembl chr 6:126,992,549...127,005,150 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in IMP (MGI:5487758|PMID:17202865) AgBase PMID:17202865 MGI:5487758 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IMP (PMID:17360777) MGI PMID:17360777 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IMP (PMID:8565825) MGI PMID:8565825 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Otor otoraplin acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:10998416) MGI
GO_Central		 PMID:10998416 GO_REF:0000033 NCBI chr 2:142,920,313...142,923,633
Ensembl chr 2:142,920,393...142,923,633 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within IMP (PMID:11593033) MGI PMID:11593033 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IMP (PMID:14745966) MGI PMID:14745966 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 involved_in IMP (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chr 6:143,774,151...144,728,008
Ensembl chr 6:143,774,151...144,727,703 		JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 involved_in IMP (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:10319868)
(PMID:12414734)		 MGI PMID:10319868 PMID:12414734 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within IGI (PMID:8565825) MGI PMID:8565825 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within IMP (PMID:9250685) MGI PMID:9250685 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Uncx UNC homeobox acts_upstream_of_or_within IMP (PMID:10804169)
(PMID:10804168)		 MGI PMID:10804168 PMID:10804169 NCBI chr 5:139,529,620...139,533,934
Ensembl chr 5:139,529,249...139,533,934 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
cartilage development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase acts_upstream_of_or_within IMP (PMID:15622513) MGI PMID:15622513 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212 		JBrowse link
G Col1a1 collagen, type I, alpha 1 acts_upstream_of_or_within IMP (PMID:18248096) MGI PMID:18248096 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within ISO
IMP		 mandibular condylar cartilage
(PMID:8989518)
(PMID:9022054)
(PMID:11680679)		 RGD
MGI		 PMID:8989518 PMID:9022054 PMID:11680679 PMID:12924823 RGD:8661659 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:21185280), (PMID:23958822) MGI PMID:21185280 PMID:23958822 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Ghr growth hormone receptor ISO RGD PMID:15749813 RGD:2307373 NCBI chr15:3,347,237...3,612,834
Ensembl chr15:3,347,242...3,612,974 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:14668414) MGI PMID:14668414 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:14668414) MGI PMID:14668414 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10545953) MGI PMID:10545953 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:16537395) MGI PMID:16537395 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within IMP (PMID:22318228) MGI PMID:22318228 NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:114,760,213...114,796,497
Ensembl chr 5:114,760,213...114,796,482 		JBrowse link
cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IGI (PMID:17764670) MGI PMID:17764670 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IGI (PMID:17764670) MGI PMID:17764670 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within IMP (PMID:9441679) MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (PMID:17420000) MGI PMID:17420000 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IMP (PMID:12489152) MGI PMID:12489152 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Snai1 snail family zinc finger 1 acts_upstream_of_or_within IGI (PMID:17376812) MGI PMID:17376812 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734 		JBrowse link
G Snai2 snail family zinc finger 2 acts_upstream_of_or_within IGI (PMID:17376812) MGI PMID:17376812 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249 		JBrowse link
cell adhesion involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in IMP (MGI:4950310|PMID:21350012) UniProt PMID:21350012 MGI:4950310 NCBI chr12:95,658,780...95,751,989
Ensembl chr12:95,659,000...95,751,989 		JBrowse link
cell migration involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin related 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:105,402,196...105,437,562
Ensembl chr 7:105,402,197...105,436,861 		JBrowse link
G Eng endoglin acts_upstream_of_or_within IMP (PMID:19703439) MGI PMID:19703439 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4837019|PMID:20890042) BHF-UCL PMID:20890042 MGI:4837019 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Snai2 snail family zinc finger 2 involved_in IMP (MGI:3808643|PMID:18663143) BHF-UCL PMID:18663143 MGI:3808643 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249 		JBrowse link
cell proliferation involved in endocardial cushion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor, beta receptor II NOT|involved_in IMP (MGI:4821522|PMID:20652948) BHF-UCL PMID:20652948 MGI:4821522 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
cell proliferation involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of IMP (PMID:17350610) MGI PMID:17350610 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
cell proliferation involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:20144608) MGI PMID:20144608 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:16836994) MGI PMID:16836994 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, liver/bone/kidney ISO RGD PMID:17043865 RGD:2316162 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695 		JBrowse link
G Ank progressive ankylosis involved_in IDA
IMP		 (PMID:31059863) MGI PMID:31059863 NCBI chr15:27,466,763...27,594,995
Ensembl chr15:27,466,763...27,594,995 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP
IDA
IGI		 (PMID:31059863) MGI PMID:31059863 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in IMP
IDA		 (PMID:31059863) MGI PMID:31059863 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:14,031,642...14,060,846
Ensembl chr 2:13,855,093...14,060,847 		JBrowse link
G Sp7 Sp7 transcription factor 7 involved_in IGI
IMP
IDA		 (PMID:31059863) MGI PMID:31059863 NCBI chr15:102,265,038...102,275,498
Ensembl chr15:102,265,041...102,275,617 		JBrowse link
G Wls wntless WNT ligand secretion mediator involved_in IGI (PMID:31059863) MGI PMID:31059863 NCBI chr 3:159,545,287...159,644,302
Ensembl chr 3:159,545,309...159,644,300 		JBrowse link
chondrocyte development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinh1 serine (or cysteine) peptidase inhibitor, clade H, member 1 acts_upstream_of_or_within IMP (PMID:22492985) MGI PMID:22492985 NCBI chr 7:98,994,583...99,002,321
Ensembl chr 7:98,994,583...99,002,446 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3, neutral acts_upstream_of_or_within IMP (PMID:21788370) MGI PMID:21788370 NCBI chr 8:106,979,180...107,064,597
Ensembl chr 8:106,979,180...107,064,620 		JBrowse link
chondrocyte differentiation involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 acts_upstream_of_or_within IMP (PMID:19623616) MGI PMID:19623616 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:25639508) MGI PMID:25639508 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Scube2 signal peptide, CUB domain, EGF-like 2 acts_upstream_of_or_within IMP (PMID:25639508) MGI PMID:25639508 NCBI chr 7:109,397,897...109,464,886
Ensembl chr 7:109,397,883...109,464,886 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Trip11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within IMP (PMID:20089971) MGI PMID:20089971 NCBI chr12:101,800,304...101,879,463
Ensembl chr12:101,800,302...101,879,526 		JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 involved_in IMP (MGI:3703484|PMID:17064680) UniProt PMID:17064680 MGI:3703484 NCBI chr 4:114,781,640...114,783,264
Ensembl chr 4:114,782,344...114,783,210 		JBrowse link
G Jag1 jagged 1 acts_upstream_of_or_within IMP (PMID:23676271) MGI PMID:23676271 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IMP (PMID:23676271) MGI PMID:23676271 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within IMP (PMID:21856951) MGI PMID:21856951 NCBI chr 7:97,999,875...98,010,602
Ensembl chr 7:97,999,875...98,010,535 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within IMP (PMID:22627278) MGI PMID:22627278 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
circumferential growth involved in left ventricle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl-hydrocarbon receptor involved_in IMP (MGI:3760685|PMID:14644620) DFLAT PMID:14644620 MGI:3760685 NCBI chr12:35,547,978...35,584,988
Ensembl chr12:35,547,973...35,585,037 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in IMP (MGI:3719969|PMID:17609112) UniProt PMID:17609112 MGI:3719969 NCBI chr 4:132,083,233...132,149,765
Ensembl chr 4:132,083,234...132,149,800 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
cochlea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within IGI (PMID:18606138) MGI PMID:18606138 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within IGI (PMID:16116426) MGI PMID:16116426 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within IGI (PMID:19008950)
(PMID:16116426)		 MGI PMID:16116426 PMID:19008950 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within IGI (PMID:19008950) MGI PMID:19008950 NCBI chr16:20,335,694...20,352,763
Ensembl chr16:20,335,732...20,352,760 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10072433) MGI PMID:10072433 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within IGI (PMID:17433286) MGI PMID:17433286 NCBI chr 2:80,242,314...80,277,740
Ensembl chr 2:80,242,314...80,277,969 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:17395647) MGI PMID:17395647 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within IGI (PMID:20643356) MGI PMID:20643356 NCBI chr 4:135,269,199...135,300,943
Ensembl chr 4:135,269,199...135,300,941 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Hpn hepsin involved_in IMP (MGI:5306554|PMID:20683358) UniProt PMID:20683358 MGI:5306554 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
G Myo3a myosin IIIA involved_in IMP (MGI:5766107|PMID:26754646) UniProt PMID:26754646 MGI:5766107 NCBI chr 2:22,232,360...22,508,693
Ensembl chr 2:22,232,314...22,508,264 		JBrowse link
G Myo3b myosin IIIB involved_in IMP (MGI:5766107|PMID:26754646) UniProt PMID:26754646 MGI:5766107 NCBI chr 2:69,869,464...70,259,542
Ensembl chr 2:69,869,470...70,259,542 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 IGI
IMP		 (MGI:4822275|PMID:20727173)
(PMID:16916509)
(MGI:84247|PMID:8951055)		 UniProt
MGI
DFLAT		 PMID:8951055 PMID:16916509 PMID:20727173 MGI:4822275 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 involved_in IGI (MGI:5284768|PMID:18231833) UniProt PMID:18231833 MGI:5284768 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813 		JBrowse link
G Ptk7 PTK7 protein tyrosine kinase 7 acts_upstream_of_or_within IMP (PMID:20704721) MGI PMID:20704721 NCBI chr17:46,875,377...46,940,975
Ensembl chr17:46,875,397...46,940,430 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:20016102) MGI PMID:20016102 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12874121) MGI PMID:12874121 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:20346939) MGI PMID:20346939 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tbx1 T-box 1 involved_in
acts_upstream_of_or_within		 IGI
IMP		 (MGI:5284768|PMID:18231833)
(PMID:17825816)		 UniProt
MGI		 PMID:17825816 PMID:18231833 MGI:5284768 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx18 T-box18 acts_upstream_of_or_within IMP (PMID:18353863) MGI PMID:18353863 NCBI chr 9:87,584,853...87,613,313
Ensembl chr 9:87,584,853...87,613,313 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,318,917...56,326,816
Ensembl chr13:56,321,517...56,326,698 		JBrowse link
G Tshr thyroid stimulating hormone receptor acts_upstream_of_or_within IMP (PMID:10575115) MGI PMID:10575115 NCBI chr12:91,367,767...91,507,283
Ensembl chr12:91,351,337...91,516,582 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IGI
IMP		 (PMID:20940229)
(PMID:17433286)
(PMID:20643356)
(PMID:16116426), (PMID:18606138)
(PMID:19008950)		 MGI PMID:16116426 PMID:17433286 PMID:18606138 PMID:19008950 PMID:20643356 More... NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP
IGI		 (PMID:17433286) MGI PMID:17433286 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:21980308) MGI PMID:21980308 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:5009392|PMID:17610272) UniProt PMID:17610272 MGI:5009392 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
cone retinal bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IMP (PMID:29518352)
(PMID:23580486)		 MGI PMID:23580486 PMID:29518352 NCBI chr 3:107,994,120...108,008,748
Ensembl chr 3:108,000,105...108,008,748 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:26607664) MGI PMID:26607664 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:9071226) MGI PMID:9071226 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013 		JBrowse link
coronal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:19389359) MGI PMID:19389359 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
cranial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (PMID:9477322) MGI PMID:9477322 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IDA (PMID:9477322) MGI PMID:9477322 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Igf1 insulin-like growth factor 1 ISO RGD PMID:10597685 RGD:12910129 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 5:28,276,410...28,283,660
Ensembl chr 5:28,276,361...28,283,660 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 1:121,232,082...121,260,391
Ensembl chr 1:121,232,082...121,260,318 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in
acts_upstream_of_or_within		 IMP (MGI:3623529|PMID:16502419)
(PMID:12221714)
(PMID:15030764)		 UniProt
MGI		 PMID:12221714 PMID:15030764 PMID:16502419 MGI:3623529 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
craniofacial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn3 forkhead box N3 acts_upstream_of_or_within IMP (PMID:20691664) MGI PMID:20691664 NCBI chr12:99,156,340...99,529,926
Ensembl chr12:99,156,337...99,529,841 		JBrowse link
G Frem1 Fras1 related extracellular matrix protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:82,816,157...82,970,743
Ensembl chr 4:82,816,164...82,970,576 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821 		JBrowse link
G Mmp16 matrix metallopeptidase 16 acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr 4:17,853,072...18,117,479
Ensembl chr 4:17,852,893...18,119,145 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:33,758,991...33,781,642
Ensembl chr 1:33,758,968...33,781,645 		JBrowse link
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,318,917...56,326,816
Ensembl chr13:56,321,517...56,326,698 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within IMP (PMID:28954202) MGI PMID:28954202 NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119 		JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 acts_upstream_of_or_within IMP (PMID:23174213) MGI PMID:23174213 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133 		JBrowse link
dentinogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:25027178) RGD
GO_Central
MGI		 PMID:24502800 PMID:25027178 GO_REF:0000033 RGD:12911210 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within IMP (PMID:22732358) MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832 		JBrowse link
G Htra1 HtrA serine peptidase 1 ISO RGD PMID:22595117 RGD:7394756 NCBI chr 7:130,537,933...130,587,388
Ensembl chr 7:130,537,841...130,587,390 		JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:137,090,358...137,101,126
Ensembl chr 5:137,090,358...137,101,122 		JBrowse link
G Slc34a1 solute carrier family 34 (sodium phosphate), member 1 ISO RGD PMID:12369784 RGD:7243151 NCBI chr13:55,547,435...55,562,508
Ensembl chr13:55,546,000...55,563,405 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3, neutral acts_upstream_of_or_within IMP (PMID:16025116) MGI PMID:16025116 NCBI chr 8:106,979,180...107,064,597
Ensembl chr 8:106,979,180...107,064,620 		JBrowse link
diaphragm morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in TAS (MGI:3769320|PMID:17643447) BHF-UCL PMID:17643447 MGI:3769320 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H involved_in IMP (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr 9:89,936,320...89,958,148
Ensembl chr 9:89,936,205...89,958,142 		JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin acts_upstream_of_or_within IMP (PMID:17369357) MGI PMID:17369357 NCBI chr 5:91,287,458...91,296,291
Ensembl chr 5:91,287,458...91,296,291 		JBrowse link
G Tfap2c transcription factor AP-2, gamma acts_upstream_of_or_within IMP (PMID:20131354) MGI PMID:20131354 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
dichotomous subdivision of terminal units involved in salivary gland branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 acts_upstream_of_or_within IMP
IGI		 (PMID:17626059) MGI PMID:17626059 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844 		JBrowse link
G Plxna1 plexin A1 acts_upstream_of_or_within IDA (PMID:17626059) MGI PMID:17626059 NCBI chr 6:89,293,295...89,339,595
Ensembl chr 6:89,293,296...89,339,602 		JBrowse link
G Plxnd1 plexin D1 acts_upstream_of_or_within IDA (PMID:17626059) MGI PMID:17626059 NCBI chr 6:115,931,772...115,972,300
Ensembl chr 6:115,931,772...115,971,966 		JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A acts_upstream_of_or_within IGI
IDA		 (PMID:17626059) MGI PMID:17626059 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C acts_upstream_of_or_within IDA (PMID:17626059) MGI PMID:17626059 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 involved_in IMP (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902 NCBI chr13:98,490,753...98,493,213
Ensembl chr13:98,490,750...98,495,813 		JBrowse link
diencephalon morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI (PMID:20816794) MGI PMID:20816794 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IGI (PMID:20816794) MGI PMID:20816794 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:15240551) MGI PMID:15240551 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl3 kelch-like 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:58,148,040...58,271,288
Ensembl chr13:58,148,042...58,261,406 		JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:101,151,363...101,168,235
Ensembl chr11:101,151,393...101,168,235 		JBrowse link
ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:10932191) MGI PMID:10932191 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Gjb6 gap junction protein, beta 6 acts_upstream_of_or_within IMP (PMID:12490528) MGI PMID:12490528 NCBI chr14:57,360,760...57,370,764
Ensembl chr14:57,360,760...57,371,068 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:15190012) MGI PMID:15190012 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (PMID:22228095) MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 stimulated by retinoic acid gene 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:57,971,076...58,061,287
Ensembl chr 9:57,971,071...58,061,279 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:10049573) MGI PMID:10049573 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IGI (PMID:18653562) MGI PMID:18653562 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within IMP (PMID:18056999) MGI PMID:18056999 NCBI chr17:31,896,905...31,900,704
Ensembl chr17:31,896,781...31,900,707 		JBrowse link
G Foxf2 forkhead box F2 involved_in IMP (MGI:5297296|PMID:22022403) BHF-UCL PMID:22022403 MGI:5297296 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IMP (MGI:3826935|PMID:18832390) CACAO PMID:18832390 MGI:3826935 NCBI chr 1:64,769,717...64,776,907
Ensembl chr 1:64,769,717...64,776,910 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within IMP (PMID:28778798) MGI PMID:28778798 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:28778798) MGI PMID:28778798 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:18582859) MGI PMID:18582859 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B involved_in IMP (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:19653321)
(PMID:18985738)		 MGI PMID:18985738 PMID:19653321 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IGI (PMID:18653562) MGI PMID:18653562 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Sp1 trans-acting transcription factor 1 acts_upstream_of_or_within IGI (PMID:17584888) MGI PMID:17584888 NCBI chr15:102,314,751...102,344,839
Ensembl chr15:102,314,578...102,344,839 		JBrowse link
G Sp3 trans-acting transcription factor 3 acts_upstream_of_or_within IGI (PMID:17584888) MGI PMID:17584888 NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:9811866) MGI PMID:9811866 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Th tyrosine hydroxylase involved_in IMP (MGI:3617102|PMID:16445854) BHF-UCL PMID:16445854 MGI:3617102 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:18436818) MGI PMID:18436818 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2610005L07Rik RIKEN cDNA 2610005L07 gene acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:9268572) MGI PMID:9268572 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Dlx1as distal-less homeobox 1, antisense acts_upstream_of_or_within IMP (PMID:23415800) MGI PMID:23415800 NCBI chr 2:71,360,982...71,368,235
Ensembl chr 2:71,346,798...71,368,252 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IMP (PMID:7590232) MGI PMID:7590232 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:119,179,189...119,190,869
Ensembl chr11:119,179,189...119,190,915 		JBrowse link
G Eif4a3l1 eukaryotic translation initiation factor 4A3 like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:136,304,537...136,306,981
Ensembl chr 6:136,304,537...136,306,981 		JBrowse link
G Eif4a3l2 eukaryotic translation initiation factor 4A3 like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:116,527,132...116,529,563
Ensembl chr 6:116,528,102...116,529,463 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9106663) MGI PMID:9106663 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IGI
IMP		 (PMID:17525797) MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within IMP (PMID:15797856) MGI PMID:15797856 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:21377456) MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr17:25,235,056...25,318,461
Ensembl chr17:25,235,059...25,318,469 		JBrowse link
G Irx5 Iroquois homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:93,084,424...93,088,084
Ensembl chr 8:93,084,253...93,102,914 		JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821 		JBrowse link
G Mmp16 matrix metallopeptidase 16 acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr 4:17,853,072...18,117,479
Ensembl chr 4:17,852,893...18,119,145 		JBrowse link
G Nipbl NIPBL cohesin loading factor acts_upstream_of_or_within IMP (PMID:19763162) MGI PMID:19763162 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11311163) MGI PMID:11311163 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within IMP (PMID:23349049) MGI PMID:23349049 NCBI chr 4:44,524,748...44,710,694
Ensembl chr 4:44,524,757...44,710,487 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in IMP
IBA		 (MGI:894516|PMID:9226440) UniProt
GO_Central		 PMID:9226440 GO_REF:0000033 MGI:894516 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:7758948)
(PMID:9729491)		 MGI PMID:7758948 PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IGI (PMID:15030764) MGI PMID:15030764 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Setd2 SET domain containing 2 acts_upstream_of_or_within IMP (PMID:20133625) MGI PMID:20133625 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:20515681) MGI PMID:20515681 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six2 sine oculis-related homeobox 2 acts_upstream_of_or_within IMP (PMID:20515681) MGI PMID:20515681 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within IGI (PMID:20515681) MGI PMID:20515681 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Slc39a1 solute carrier family 39 (zinc transporter), member 1 acts_upstream_of_or_within IGI
IMP		 (PMID:16652366) MGI PMID:16652366 NCBI chr 3:90,155,512...90,160,923
Ensembl chr 3:90,155,479...90,160,919 		JBrowse link
G Slc39a3 solute carrier family 39 (zinc transporter), member 3 acts_upstream_of_or_within IGI (PMID:16652366) MGI PMID:16652366 NCBI chr10:80,864,374...80,873,169
Ensembl chr10:80,864,372...80,873,260 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:15190012) MGI PMID:15190012 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx15 T-box 15 acts_upstream_of_or_within IMP (PMID:15728667) MGI PMID:15728667 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in
acts_upstream_of_or_within		 IMP (MGI:80519|PMID:8622766)
(PMID:8622765)		 UniProt
MGI		 PMID:8622765 PMID:8622766 MGI:80519 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I acts_upstream_of_or_within IMP (PMID:16806156) MGI PMID:16806156 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:2678274|PMID:12975342) BHF-UCL PMID:12975342 MGI:2678274 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in
acts_upstream_of_or_within		 IMP
IGI
ISO		 (MGI:1100098|PMID:8988167)
(PMID:15030764)		 BHF-UCL
MGI		 PMID:8988167 PMID:15030764 GO_REF:0000119 MGI:1100098 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 acts_upstream_of_or_within IGI (PMID:15030764) MGI PMID:15030764 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750 		JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within IMP (PMID:22228095) MGI PMID:22228095 NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:16998816)
(PMID:16054034)		 MGI PMID:16054034 PMID:16998816 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
embryonic digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15017552)
(PMID:16618415)		 MGI PMID:15017552 PMID:16618415 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16618415), (PMID:21492869)
(PMID:21550054)		 MGI PMID:16618415 PMID:21492869 PMID:21550054 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxf1 forkhead box F1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within IMP (PMID:16127717) MGI PMID:16127717 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:16247775) MGI PMID:16247775 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within IMP (PMID:8557196) MGI PMID:8557196 NCBI chr 1:184,459,340...184,464,690
Ensembl chr 1:184,459,337...184,464,816 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:18635606) MGI PMID:18635606 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IDA (MGI:4399020|PMID:16888283) UniProt PMID:16888283 MGI:4399020 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:10821773) MGI PMID:10821773 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:16423343) MGI PMID:16423343 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in IMP (MGI:1860627|PMID:10903171) UniProt PMID:10903171 MGI:1860627 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:21550054) MGI PMID:21550054 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of_or_within		 TAS
IMP		 (MGI:5306328|PMID:11001584)
(PMID:10821773)		 BHF-UCL
MGI		 PMID:10821773 PMID:11001584 MGI:5306328 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:16141225) MGI PMID:16141225 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Six2 sine oculis-related homeobox 2 involved_in IMP (MGI:4365896|PMID:19660448) UniProt PMID:19660448 MGI:4365896 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISO RGD
MGI		 PMID:11804032 GO_REF:0000096 MGI:4417868 RGD:727206 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Tcf7 transcription factor 7, T cell specific acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
embryonic ectodermal digestive tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 acts_upstream_of_or_within IGI (PMID:16207763), (PMID:16611695) MGI PMID:16207763 PMID:16611695 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IMP
IGI		 (PMID:16611695)
(PMID:16207763)
(PMID:16207763), (PMID:16611695)		 MGI PMID:16207763 PMID:16611695 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Efemp1 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr11:28,803,154...28,876,743
Ensembl chr11:28,803,204...28,876,743 		JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913 		JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr18:58,141,689...58,343,200
Ensembl chr18:58,141,695...58,343,559 		JBrowse link
G Foxl2 forkhead box L2 acts_upstream_of_or_within IMP (PMID:15056605) MGI PMID:15056605 NCBI chr 9:98,837,495...98,840,601
Ensembl chr 9:98,837,341...98,840,596 		JBrowse link
G Mfap2 microfibrillar-associated protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295 		JBrowse link
G Mfap5 microfibrillar associated protein 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:122,490,543...122,506,249
Ensembl chr 6:122,482,804...122,506,249 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IGI (PMID:16207763) MGI PMID:16207763 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (PMID:16207763) MGI PMID:16207763 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Vax2 ventral anterior homeobox 2 acts_upstream_of_or_within IDA
IMP		 (PMID:10595508)
(PMID:11830579)		 MGI PMID:10595508 PMID:11830579 NCBI chr 6:83,688,221...83,715,295
Ensembl chr 6:83,688,246...83,715,295 		JBrowse link
embryonic genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:12004962) MGI PMID:12004962 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IMP (PMID:14745966) MGI PMID:14745966 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Tcf7 transcription factor 7, T cell specific acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IGI (PMID:15057272) MGI PMID:15057272 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:11076684) MGI PMID:11076684 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IMP (MGI:4354447|PMID:19609448) BHF-UCL PMID:19609448 MGI:4354447 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac involved_in IMP (MGI:1267127|PMID:9628868) UniProt PMID:9628868 MGI:1267127 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in IMP (MGI:4946573|PMID:21305474) BHF-UCL PMID:21305474 MGI:4946573 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3579960|PMID:15901664) BHF-UCL PMID:15901664 MGI:3579960 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tead1 TEA domain family member 1 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014 		JBrowse link
G Tead2 TEA domain family member 2 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068 		JBrowse link
G Yap1 yes-associated protein 1 acts_upstream_of_or_within IGI (PMID:18332127) MGI PMID:18332127 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597 		JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:27395007) MGI PMID:27395007 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP
IGI		 (PMID:27395007) MGI PMID:27395007 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:27395007) MGI PMID:27395007 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within IMP (PMID:20589884) MGI PMID:20589884 NCBI chr  X:100,317,697...100,342,540
Ensembl chr  X:100,317,636...100,341,071 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in IMP (MGI:5468075|PMID:23267094) BHF-UCL PMID:23267094 MGI:5468075 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IMP (PMID:16020517) MGI PMID:16020517 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO RGD
MGI		 PMID:11002343 GO_REF:0000096 MGI:4417868 RGD:1579866 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO RGD
MGI		 PMID:11002343 GO_REF:0000096 MGI:4417868 RGD:1579866 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within IMP (PMID:19286674) MGI PMID:19286674 NCBI chr 6:128,298,103...128,332,833
Ensembl chr 6:128,298,124...128,332,814 		JBrowse link
embryonic organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:15843416) MGI PMID:15843416 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxe1 forkhead box E1 acts_upstream_of_or_within IMP (PMID:9697704) MGI PMID:9697704 NCBI chr 4:46,343,644...46,345,774
Ensembl chr 4:46,343,609...46,346,412 		JBrowse link
G Hoxc4 homeobox C4 acts_upstream_of_or_within IMP (PMID:8660891) MGI PMID:8660891 NCBI chr15:102,926,531...102,945,281
Ensembl chr15:102,927,366...102,945,278 		JBrowse link
G Neurod1 neurogenic differentiation 1 involved_in IMP (MGI:1096974|PMID:9308961) BHF-UCL PMID:9308961 MGI:1096974 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095 		JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in IMP (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:16287714) MGI PMID:16287714 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (PMID:19754878) MGI PMID:19754878 NCBI chr 9:35,332,836...35,418,948
Ensembl chr 9:35,332,424...35,418,948 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:3772525|PMID:18094249) UniProt PMID:18094249 MGI:3772525 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:19653321) MGI PMID:19653321 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEP (MGI:2658694|PMID:12692551) BHF-UCL PMID:12692551 MGI:2658694 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in IMP (MGI:1344892|PMID:10469643) BHF-UCL PMID:10469643 MGI:1344892 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within IMP MGI MGI:48782 NCBI chr17:26,350,294...26,414,784
Ensembl chr17:26,357,662...26,414,785 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IGI		 (PMID:9664686) MGI PMID:9664686 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP
IGI		 (PMID:9664686) MGI PMID:9664686 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Col2a1 collagen, type II, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:20978074) MGI PMID:20978074 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within IGI (PMID:20978074) MGI PMID:20978074 NCBI chr15:102,862,961...102,865,136
Ensembl chr15:102,862,862...102,866,143 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:20978074) MGI PMID:20978074 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Hyal1 hyaluronoglucosaminidase 1 acts_upstream_of_or_within IMP (PMID:18772348) MGI PMID:18772348 NCBI chr 9:107,454,149...107,458,898
Ensembl chr 9:107,454,126...107,458,909 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Shox2 SHOX homeobox 2 acts_upstream_of_or_within IMP (PMID:18514492) MGI PMID:18514492 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IGI (MGI:4950000|PMID:21262216) BHF-UCL PMID:21262216 MGI:4950000 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:15728667), (PMID:9847249) MGI
GO_Central		 PMID:9847249 PMID:15728667 GO_REF:0000033 NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076 		JBrowse link
G Alx3 aristaless-like homeobox 3 acts_upstream_of_or_within IGI (PMID:11641221), (PMID:15728667) MGI PMID:11641221 PMID:15728667 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IGI
IMP		 (PMID:9847249)
(PMID:15728667)
(PMID:11641221)		 MGI PMID:9847249 PMID:11641221 PMID:15728667 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within IMP (PMID:19270745) MGI PMID:19270745 NCBI chr12:3,476,892...3,560,811
Ensembl chr12:3,476,857...3,556,852 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene acts_upstream_of_or_within IGI (PMID:11290297) MGI PMID:11290297 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:16712836) MGI PMID:16712836 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (PMID:16079159) MGI PMID:16079159 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:4100752) MGI PMID:4100752 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within IMP (PMID:11238884) MGI PMID:11238884 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:45,338,735...45,665,011
Ensembl chr 9:45,337,926...45,665,010 		JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:116,169,881...116,226,665
Ensembl chr12:116,169,882...116,226,642 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10471511) MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 acts_upstream_of_or_within IMP (PMID:23187127) MGI PMID:23187127 NCBI chr 1:190,738,029...190,758,387
Ensembl chr 1:190,738,044...190,758,355 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9409679) MGI PMID:9409679 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in IMP (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:15728667) MGI PMID:15728667 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within IMP (PMID:7555718)
(PMID:7555726)		 MGI PMID:7555718 PMID:7555726 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IGI (PMID:15634706) MGI PMID:15634706 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:9441667) GO_Central
MGI		 PMID:9441667 GO_REF:0000033 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Hoxa4 homeobox A4 acts_upstream_of_or_within
involved_in		 IMP
IBA
IGI		 (PMID:7918106)
(PMID:7628700)		 MGI
GO_Central		 PMID:7628700 PMID:7918106 GO_REF:0000033 NCBI chr 6:52,166,662...52,168,683
Ensembl chr 6:52,166,651...52,168,733 		JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within IMP (PMID:17417799)
(PMID:7901120), (PMID:9603431)		 MGI PMID:7901120 PMID:9603431 PMID:17417799 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Hoxa7 homeobox A7 acts_upstream_of_or_within IGI (PMID:9784603) MGI PMID:9784603 NCBI chr 6:52,191,471...52,198,757
Ensembl chr 6:52,191,471...52,198,834 		JBrowse link
G Hoxa9 homeobox A9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:52,200,077...52,203,169
Ensembl chr 6:52,200,080...52,208,069 		JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within IGI (PMID:10885747) MGI PMID:10885747 NCBI chr11:96,256,547...96,259,082
Ensembl chr11:96,256,578...96,259,082 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within IGI (PMID:10885747) MGI PMID:10885747 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838 		JBrowse link
G Hoxb3 homeobox B3 acts_upstream_of_or_within
involved_in		 IMP
IGI
IBA		 (PMID:9441667)
(PMID:10885747)		 MGI
GO_Central		 PMID:9441667 PMID:10885747 GO_REF:0000033 NCBI chr11:96,197,927...96,238,756
Ensembl chr11:96,214,152...96,238,756 		JBrowse link
G Hoxb4 homeobox B4 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:10885747)
(PMID:7628700)		 MGI
GO_Central		 PMID:7628700 PMID:10885747 GO_REF:0000033 NCBI chr11:96,209,093...96,212,464
Ensembl chr11:96,209,093...96,212,464 		JBrowse link
G Hoxb5 homeobox B5 acts_upstream_of_or_within IGI
IMP		 (PMID:7828847)
(PMID:10885747)		 MGI PMID:7828847 PMID:10885747 NCBI chr11:96,194,338...96,196,947
Ensembl chr11:96,194,162...96,196,947 		JBrowse link
G Hoxb6 homeobox B6 acts_upstream_of_or_within IGI (PMID:10885747) MGI PMID:10885747 NCBI chr11:96,183,647...96,192,395
Ensembl chr11:96,183,302...96,192,395 		JBrowse link
G Hoxb7 homeobox B7 acts_upstream_of_or_within IGI
IMP		 (PMID:10885747)
(PMID:9784603)		 MGI PMID:9784603 PMID:10885747 NCBI chr11:96,176,431...96,180,989
Ensembl chr11:96,177,449...96,180,988 		JBrowse link
G Hoxb8 homeobox B8 acts_upstream_of_or_within IGI
IMP		 (PMID:10885747)
(PMID:10559485)		 MGI PMID:10559485 PMID:10885747 NCBI chr11:96,170,227...96,176,151
Ensembl chr11:96,172,731...96,176,141 		JBrowse link
G Hoxb9 homeobox B9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:96,162,156...96,167,421
Ensembl chr11:96,162,283...96,167,421 		JBrowse link
G Hoxc4 homeobox C4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:102,926,531...102,945,281
Ensembl chr15:102,927,366...102,945,278 		JBrowse link
G Hoxc9 homeobox C9 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:7547473) GO_Central
MGI		 PMID:7547473 GO_REF:0000033 NCBI chr15:102,885,467...102,893,324
Ensembl chr15:102,884,874...102,893,531 		JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within IGI (PMID:10642795) MGI PMID:10642795 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd3 homeobox D3 acts_upstream_of_or_within
involved_in		 IMP
IBA
IGI		 (PMID:7910549), (PMID:7913519)
(PMID:7913519)		 MGI
GO_Central		 PMID:7910549 PMID:7913519 GO_REF:0000033 NCBI chr 2:74,542,337...74,578,615
Ensembl chr 2:74,542,271...74,578,786 		JBrowse link
G Hoxd4 homeobox D4 acts_upstream_of_or_within
involved_in		 IGI
IBA
IMP		 (PMID:7628700)
(PMID:7750651)		 MGI
GO_Central		 PMID:7628700 PMID:7750651 GO_REF:0000033 NCBI chr 2:74,552,322...74,559,504
Ensembl chr 2:74,542,273...74,559,504 		JBrowse link
G Hoxd9 homeobox D9 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:10642795) GO_Central
MGI		 PMID:10642795 GO_REF:0000033 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10579729) MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within IMP (PMID:9799236) MGI PMID:9799236 NCBI chr17:48,126,253...48,145,616
Ensembl chr17:48,126,253...48,145,616 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (PMID:17420000) MGI PMID:17420000 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in IMP (MGI:5551355|PMID:24052814) UniProt PMID:24052814 MGI:5551355 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Men1 multiple endocrine neoplasia 1 acts_upstream_of_or_within IMP (PMID:17927973) MGI PMID:17927973 NCBI chr19:6,385,009...6,390,924
Ensembl chr19:6,385,009...6,390,921 		JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived acts_upstream_of_or_within IMP (PMID:17360777) MGI PMID:17360777 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IMP (PMID:10929709) MGI PMID:10929709 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Osr2 odd-skipped related 2 acts_upstream_of_or_within IMP (PMID:15175245) MGI PMID:15175245 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within IGI (PMID:11290297) MGI PMID:11290297 NCBI chr11:97,579,647...97,593,260
Ensembl chr11:97,579,649...97,591,323 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within IC (MGI:3847057|PMID:19412548) GOC PMID:19412548 MGI:3847057 NCBI chr 5:65,763,062...65,855,579
Ensembl chr 5:65,763,064...65,855,616 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI
IMP		 (PMID:11532916), (PMID:9729491), (PMID:9876178)
(PMID:7758948)		 MGI PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:11532916), (PMID:9729491), (PMID:9876178) MGI PMID:9729491 PMID:9876178 PMID:11532916 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Satb2 special AT-rich sequence binding protein 2 acts_upstream_of_or_within IMP (PMID:16960803)
(PMID:16751105)		 MGI PMID:16751105 PMID:16960803 NCBI chr 1:56,833,145...57,019,350
Ensembl chr 1:56,833,140...57,017,809 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six2 sine oculis-related homeobox 2 acts_upstream_of_or_within IGI (PMID:15634706) MGI PMID:15634706 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Tbx15 T-box 15 acts_upstream_of_or_within IGI
IMP		 (PMID:15728667) MGI PMID:15728667 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:15030764) MGI PMID:15030764 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
G Wnt9a wingless-type MMTV integration site family, member 9A acts_upstream_of_or_within IMP (PMID:16818445) MGI PMID:16818445 NCBI chr11:59,197,675...59,224,378
Ensembl chr11:59,197,754...59,224,378 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:9389660) MGI PMID:9389660 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within IMP (PMID:16079159) MGI PMID:16079159 NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9409679) MGI PMID:9409679 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:16221728) MGI PMID:16221728 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:3777712|PMID:14695376) UniProt PMID:14695376 MGI:3777712 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP (PMID:17420000) MGI PMID:17420000 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in IMP (MGI:5468075|PMID:23267094) BHF-UCL PMID:23267094 MGI:5468075 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 acts_upstream_of_or_within IMP (PMID:16020517) MGI PMID:16020517 NCBI chr18:60,817,566...60,907,465
Ensembl chr18:60,817,566...60,881,722 		JBrowse link
G Nipbl NIPBL cohesin loading factor acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:19763162) MGI
GO_Central		 PMID:19763162 GO_REF:0000033 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
G Tbx1 T-box 1 involved_in ISS
ISO		 (MGI:1095819|PMID:9268629) UniProt
MGI		 PMID:9268629 GO_REF:0000119 MGI:1095819 MGI:4834177 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in IDA
IBA		 (MGI:6716964|PMID:26403673) ARUK-UCL
GO_Central		 PMID:26403673 GO_REF:0000033 MGI:6716964 NCBI chr  X:167,959,110...167,970,205
Ensembl chr  X:167,959,110...167,970,196 		JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator involved_in ISO RGD
MGI		 PMID:31942562 GO_REF:0000096 MGI:4417868 RGD:126928119 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767 		JBrowse link
G Cnnm4 cyclin M4 acts_upstream_of_or_within IMP (PMID:24339795) MGI PMID:24339795 NCBI chr 1:36,510,678...36,547,857
Ensembl chr 1:36,510,701...36,547,845 		JBrowse link
G Fam20a FAM20A, golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:22732358) MGI
GO_Central		 PMID:22732358 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:109,563,752...109,613,989
Ensembl chr11:109,560,575...109,613,105 		JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:22732358) MGI
GO_Central		 PMID:22732358 GO_REF:0000033 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832 		JBrowse link
G Foxo1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chr 3:52,175,758...52,257,530
Ensembl chr 3:52,175,757...52,260,642 		JBrowse link
G Itgb6 integrin beta 6 acts_upstream_of_or_within IMP (PMID:23264742) MGI PMID:23264742 NCBI chr 2:60,428,636...60,553,005
Ensembl chr 2:60,428,636...60,552,987 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IMP (PMID:10742104) MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:18703497) MGI PMID:18703497 NCBI chr 9:43,655,251...43,718,758
Ensembl chr 9:43,655,281...43,743,955 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within IMP (PMID:19320717) MGI PMID:19320717 NCBI chr15:85,619,112...85,691,052
Ensembl chr15:85,619,184...85,687,020 		JBrowse link
G Rogdi rogdi homolog acts_upstream_of_or_within IMP (PMID:38172607) MGI PMID:38172607 NCBI chr16:4,826,593...4,831,438
Ensembl chr16:4,826,594...4,831,417 		JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:19233155) MGI PMID:19233155 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 acts_upstream_of_or_within IMP (PMID:23174213) MGI PMID:23174213 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within IMP (PMID:26247047)
(PMID:25008349)		 MGI PMID:25008349 PMID:26247047 NCBI chr 9:74,017,608...74,190,485
Ensembl chr 9:74,017,638...74,190,590 		JBrowse link
endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in IMP (MGI:3610266|PMID:16140292) BHF-UCL PMID:16140292 MGI:3610266 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Aplnr apelin receptor involved_in IMP (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IMP (MGI:3640731|PMID:16730346) BHF-UCL PMID:16730346 MGI:3640731 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:1332253|PMID:10079236) BHF-UCL PMID:10079236 MGI:1332253 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:16314491) MGI PMID:16314491 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IGI (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in IGI (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,208,713 		JBrowse link
G Tbx2 T-box 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3604925|PMID:15843409), (MGI:5299248|PMID:21983003) BHF-UCL PMID:15843409 PMID:21983003 MGI:3604925 MGI:5299248 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx3 T-box 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
endocardial cushion fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in IMP (MGI:3610266|PMID:16140292) BHF-UCL PMID:16140292 MGI:3610266 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Cplane2 ciliogenesis and planar polarity effector 2 acts_upstream_of_or_within IMP (PMID:29038301) MGI PMID:29038301 NCBI chr 4:140,941,249...140,947,425
Ensembl chr 4:140,941,267...140,954,067 		JBrowse link
G Gata5 GATA binding protein 5 involved_in IMP (MGI:5286818|PMID:21633169) BHF-UCL PMID:21633169 MGI:5286818 NCBI chr 2:179,966,881...179,977,296
Ensembl chr 2:179,966,926...179,976,492 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347) BHF-UCL PMID:11390347 MGI:3609313 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:4821522|PMID:20652948) BHF-UCL PMID:20652948 MGI:4821522 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
endocardial cushion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor, type II-like 1 involved_in IMP (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr15:101,026,403...101,043,217
Ensembl chr15:101,026,403...101,043,217 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IGI (MGI:5693221|PMID:23531444) BHF-UCL PMID:23531444 MGI:5693221 NCBI chr16:85,655,045...85,698,013
Ensembl chr16:85,653,061...85,698,716 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IMP (MGI:4837019|PMID:20890042)
(PMID:16314491)		 BHF-UCL
MGI		 PMID:16314491 PMID:20890042 MGI:4837019 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:2175930|PMID:11854453), (MGI:3040576|PMID:15073157) BHF-UCL PMID:11854453 PMID:15073157 MGI:2175930 MGI:3040576 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Eng endoglin involved_in IMP (MGI:2674189|PMID:12941632), (MGI:4368063|PMID:19703439) BHF-UCL PMID:12941632 PMID:19703439 MGI:2674189 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 acts_upstream_of_or_within IMP
IGI		 (PMID:22821713) MGI PMID:22821713 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Mdm4 transformed mouse 3T3 cell double minute 4 acts_upstream_of_or_within IGI (PMID:22821713) MGI PMID:22821713 NCBI chr 1:132,913,843...132,958,325
Ensembl chr 1:132,887,222...132,958,299 		JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell involved_in IGI (MGI:6158784|PMID:27107132) BHF-UCL PMID:27107132 MGI:6158784 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472 		JBrowse link
G Notch1 notch 1 involved_in IGI
IMP		 (MGI:6158784|PMID:27107132)
(MGI:3027664|PMID:14701881)		 BHF-UCL PMID:14701881 PMID:27107132 MGI:3027664 MGI:6158784 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Smad2 SMAD family member 2 involved_in IGI (MGI:5693221|PMID:23531444) BHF-UCL PMID:23531444 MGI:5693221 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:11951052) MGI PMID:11951052 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3579960|PMID:15901664) BHF-UCL PMID:15901664 MGI:3579960 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347), (MGI:3830400|PMID:19161227) BHF-UCL PMID:11390347 PMID:19161227 MGI:3609313 MGI:3830400 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IMP (PMID:18539270) MGI PMID:18539270 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
endocardial cushion to mesenchymal transition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor, type II-like 1 NOT|involved_in IMP (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr15:101,026,403...101,043,217
Ensembl chr15:101,026,403...101,043,217 		JBrowse link
G Eng endoglin NOT|involved_in IMP (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Has2 hyaluronan synthase 2 involved_in IMP (MGI:1861536|PMID:10930438) UniProt PMID:10930438 MGI:1861536 NCBI chr15:56,529,023...56,557,942
Ensembl chr15:56,529,023...56,557,935 		JBrowse link
endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in IMP (MGI:4847981|PMID:20960543) BHF-UCL PMID:20960543 MGI:4847981 NCBI chr 3:89,179,037...89,188,258
Ensembl chr 3:89,179,040...89,188,449 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 acts_upstream_of_or_within IGI (PMID:15680351) MGI PMID:15680351 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 acts_upstream_of_or_within IGI (PMID:15680351) MGI PMID:15680351 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 acts_upstream_of_or_within IMP (PMID:19725955) MGI PMID:19725955 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:17960558) MGI PMID:17960558 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:26972716) MGI PMID:26972716 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:22359666) MGI PMID:22359666 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP
IGI		 (PMID:21310272), (PMID:29545125) MGI PMID:21310272 PMID:29545125 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within IGI (PMID:21310272) MGI PMID:21310272 NCBI chr 2:93,525,978...93,652,913
Ensembl chr 2:93,491,373...93,652,913 		JBrowse link
G Ihh Indian hedgehog involved_in IMP (MGI:1344187|PMID:10465785), (MGI:1351296|PMID:10631175) UniProt PMID:10465785 PMID:10631175 MGI:1344187 MGI:1351296 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:11371614) MGI PMID:11371614 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
endochondral ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, liver/bone/kidney acts_upstream_of_or_within IMP (PMID:20684022) MGI PMID:20684022 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:4418577|PMID:20059955) UniProt PMID:20059955 MGI:4418577 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp6 bone morphogenetic protein 6 acts_upstream_of_or_within IMP (PMID:9664685) MGI PMID:9664685 NCBI chr13:38,529,098...38,684,283
Ensembl chr13:38,529,083...38,684,278 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within IMP (PMID:18539921) MGI PMID:18539921 NCBI chr 4:4,762,484...4,793,306
Ensembl chr 4:4,762,484...4,793,355 		JBrowse link
G Cbs cystathionine beta-synthase acts_upstream_of_or_within IMP (PMID:15622513) MGI PMID:15622513 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212 		JBrowse link
G Col10a1 collagen, type X, alpha 1 involved_in ISO RGD
MGI		 PMID:10853827 GO_REF:0000096 MGI:4417868 RGD:704421 NCBI chr10:34,265,977...34,273,081
Ensembl chr10:34,265,977...34,273,081 		JBrowse link
G Col13a1 collagen, type XIII, alpha 1 involved_in IEP (MGI:2157681|PMID:11470398) UniProt PMID:11470398 MGI:2157681 NCBI chr10:61,674,013...61,814,985
Ensembl chr10:61,674,015...61,814,887 		JBrowse link
G Col1a1 collagen, type I, alpha 1 acts_upstream_of_or_within IMP (PMID:8130375) MGI PMID:8130375 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:10100048) MGI PMID:10100048 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within IMP (PMID:21148564) MGI PMID:21148564 NCBI chr 8:68,809,433...69,188,270
Ensembl chr 8:68,809,433...69,187,798 		JBrowse link
G Cst5 cystatin D involved_in IMP (PMID:16680148) MGI PMID:16680148 NCBI chr 2:149,247,242...149,252,217
Ensembl chr 2:149,246,977...149,252,213 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in IMP (MGI:4413604|PMID:19956613) UniProt PMID:19956613 MGI:4413604 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:24770645) MGI PMID:24770645 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:21185280), (PMID:23958822) MGI PMID:21185280 PMID:23958822 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fgf18 fibroblast growth factor 18 acts_upstream_of_or_within IMP (PMID:17014841) MGI PMID:17014841 NCBI chr11:33,066,970...33,097,400
Ensembl chr11:33,067,430...33,097,400 		JBrowse link
G Foxc1 forkhead box C1 involved_in IMP (MGI:5641778|PMID:25808752) UniProt PMID:25808752 MGI:5641778 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within IMP (PMID:15797856) MGI PMID:15797856 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10579729) MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:26098911) MGI PMID:26098911 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:101,471,839...101,487,419
Ensembl chr 7:101,471,839...101,487,436 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IMP
IGI		 (PMID:17336904) MGI PMID:17336904 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mef2d myocyte enhancer factor 2D acts_upstream_of_or_within IGI (PMID:17336904) MGI PMID:17336904 NCBI chr 3:88,049,248...88,079,398
Ensembl chr 3:88,049,679...88,079,393 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IMP
ISO		 (MGI:3771509|PMID:17987127) UniProt
RGD		 PMID:10646117 PMID:17987127 MGI:3771509 RGD:10043159 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821 		JBrowse link
G Mmp16 matrix metallopeptidase 16 acts_upstream_of_or_within IGI (PMID:18022611) MGI PMID:18022611 NCBI chr 4:17,853,072...18,117,479
Ensembl chr 4:17,852,893...18,119,145 		JBrowse link
G Nab1 Ngfi-A binding protein 1 acts_upstream_of_or_within IGI (PMID:16136673) MGI PMID:16136673 NCBI chr 1:52,494,146...52,539,553
Ensembl chr 1:52,496,453...52,539,838 		JBrowse link
G Nab2 Ngfi-A binding protein 2 acts_upstream_of_or_within IGI (PMID:16136673) MGI PMID:16136673 NCBI chr10:127,496,787...127,502,572
Ensembl chr10:127,496,787...127,504,437 		JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:17353270) MGI PMID:17353270 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (PMID:15572448)
(PMID:17728275)
(PMID:15722353)		 MGI PMID:15572448 PMID:15722353 PMID:17728275 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within IMP (PMID:12915479) MGI PMID:12915479 NCBI chr10:19,735,836...19,783,420
Ensembl chr10:19,729,646...19,783,435 		JBrowse link
G Phospho1 phosphatase, orphan 1 acts_upstream_of_or_within IMP (PMID:20684022) MGI PMID:20684022 NCBI chr11:95,715,326...95,722,966
Ensembl chr11:95,715,325...95,722,966 		JBrowse link
G Pthlh parathyroid hormone-like peptide acts_upstream_of_or_within IMP (PMID:8895385) MGI PMID:8895385 NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (PMID:10072783) MGI PMID:10072783 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor involved_in IMP (MGI:4418577|PMID:20059955) UniProt PMID:20059955 MGI:4418577 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within IMP (PMID:22318228) MGI PMID:22318228 NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3, neutral acts_upstream_of_or_within IMP (PMID:17591962)
(PMID:24505141)
(PMID:21788370)		 MGI PMID:17591962 PMID:21788370 PMID:24505141 NCBI chr 8:106,979,180...107,064,597
Ensembl chr 8:106,979,180...107,064,620 		JBrowse link
G Tek TEK receptor tyrosine kinase ISO RGD PMID:11735002 RGD:1601509 NCBI chr 4:94,627,322...94,763,213
Ensembl chr 4:94,627,526...94,763,213 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in IMP (MGI:5543589|PMID:22416756) ARUK-UCL PMID:22416756 MGI:5543589 NCBI chr 5:113,931,790...113,938,457
Ensembl chr 5:113,931,790...113,938,577 		JBrowse link
epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of IGI (PMID:17428829) MGI PMID:17428829 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of IMP (PMID:19686689) MGI PMID:19686689 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin acts_upstream_of_or_within IMP (PMID:17369357) MGI PMID:17369357 NCBI chr 5:91,287,458...91,296,291
Ensembl chr 5:91,287,458...91,296,291 		JBrowse link
G Esr1 estrogen receptor 1 (alpha) acts_upstream_of_or_within IMP (PMID:12021201) MGI PMID:12021201 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:15647257) MGI PMID:15647257 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Tfap2c transcription factor AP-2, gamma acts_upstream_of_or_within IMP (PMID:20131354) MGI PMID:20131354 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IDA (PMID:17898001) MGI PMID:17898001 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
epithelial cell proliferation involved in prostatic bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:18325490) MGI PMID:18325490 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
epithelial cell proliferation involved in salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP
IGI		 (PMID:15972105) MGI PMID:15972105 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP
IGI		 (PMID:15972105) MGI PMID:15972105 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within IDA (PMID:11275690) MGI PMID:11275690 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Nkx3-1 NK3 homeobox 1 acts_upstream_of_or_within IMP (PMID:10906459) MGI PMID:10906459 NCBI chr14:69,428,141...69,432,107
Ensembl chr14:69,428,087...69,432,111 		JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide acts_upstream_of_or_within IMP (PMID:18559345) MGI PMID:18559345 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:15042696) MGI PMID:15042696 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IDA (PMID:11241200) MGI PMID:11241200 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
epithelial to mesenchymal transition involved in cardiac fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir21a microRNA 21a involved_in ISO (PMID:23441172) BHF-UCL PMID:23441172 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr19:53,880,662...53,926,024
Ensembl chr19:53,880,662...53,918,291 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:37,694,096...37,698,748
Ensembl chr 3:37,694,096...37,698,747 		JBrowse link
epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in IMP (MGI:3814273|PMID:18924235) BHF-UCL PMID:18924235 MGI:3814273 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Eng endoglin involved_in IMP (MGI:4368063|PMID:19703439) BHF-UCL PMID:19703439 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IMP
IDA		 (MGI:4359139|PMID:19509466)
(PMID:21364285)		 BHF-UCL
MGI		 PMID:19509466 PMID:21364285 MGI:4359139 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 acts_upstream_of_or_within IGI (PMID:17303760) MGI PMID:17303760 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like acts_upstream_of_or_within IGI (PMID:17303760) MGI PMID:17303760 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (PMID:18667074) MGI PMID:18667074 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:18667074) MGI PMID:18667074 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:3027664|PMID:14701881) BHF-UCL PMID:14701881 MGI:3027664 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:3027664|PMID:14701881) BHF-UCL PMID:14701881 MGI:3027664 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:4946551|PMID:21330551) BHF-UCL PMID:21330551 MGI:4946551 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Snai1 snail family zinc finger 1 involved_in IGI (MGI:3808643|PMID:18663143) BHF-UCL PMID:18663143 MGI:3808643 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734 		JBrowse link
G Snai2 snail family zinc finger 2 acts_upstream_of_or_within IMP (PMID:18663143) MGI PMID:18663143 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249 		JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within IMP (PMID:25318679) MGI PMID:25318679 NCBI chr11:89,921,174...89,927,334
Ensembl chr11:89,921,174...89,927,334 		JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) RGD
MGI		 PMID:8674409 PMID:8769111 RGD:2306315 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:18231602)
(PMID:18533146)		 MGI PMID:18231602 PMID:18533146 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Ctsd cathepsin D NOT|involved_in IMP (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr 7:141,929,647...141,941,564
Ensembl chr 7:141,929,648...141,941,775 		JBrowse link
G Ctsl cathepsin L NOT|involved_in IMP (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704 		JBrowse link
G Ctsz cathepsin Z involved_in IEP (MGI:3722010|PMID:17500053) UniProt PMID:17500053 MGI:3722010 NCBI chr 2:174,269,287...174,280,832
Ensembl chr 2:174,269,286...174,280,832 		JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within IMP (PMID:11798066) MGI PMID:11798066 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within IMP (PMID:23466739) MGI PMID:23466739 NCBI chr14:24,184,021...24,295,988
Ensembl chr14:24,184,021...24,295,988 		JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within IGI (PMID:26371508) MGI PMID:26371508 NCBI chr 4:11,331,933...11,386,783
Ensembl chr 4:11,331,933...11,386,783 		JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 acts_upstream_of_or_within IGI (PMID:26371508) MGI PMID:26371508 NCBI chr 8:106,856,658...106,863,825
Ensembl chr 8:106,856,951...106,863,606 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:28859094) MGI PMID:28859094 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP
IDA		 (PMID:15800000)
(PMID:9784490)
(PMID:17560563)
(PMID:9916808)
(PMID:16169547), (PMID:16375885), (PMID:9428423)		 MGI PMID:9428423 PMID:9784490 PMID:9916808 PMID:15800000 PMID:16169547 More... NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:24058167) MGI PMID:24058167 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within IGI (PMID:15668254) MGI PMID:15668254 NCBI chr12:57,585,750...57,594,815
Ensembl chr12:57,587,414...57,593,702 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within IGI (PMID:15668254) MGI PMID:15668254 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:11493558) MGI PMID:11493558 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Hhip Hedgehog-interacting protein acts_upstream_of_or_within IMP (PMID:12569124) MGI PMID:12569124 NCBI chr 8:80,692,480...80,784,637
Ensembl chr 8:80,692,480...80,784,635 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within IMP (PMID:24661562) MGI PMID:24661562 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within IMP (PMID:9441679) MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog acts_upstream_of_or_within IGI
IDA		 (PMID:24058167) MGI PMID:24058167 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Lama1 laminin, alpha 1 acts_upstream_of_or_within IMP (PMID:11798066), (PMID:1907584) MGI PMID:1907584 PMID:11798066 NCBI chr17:68,004,129...68,129,640
Ensembl chr17:68,004,254...68,129,642 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (PMID:8675988) UniProt PMID:8675988 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IMP (PMID:18256198) MGI PMID:18256198 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within ISO
IMP		 (PMID:10500184), (PMID:9731532) RGD
MGI		 PMID:8769111 PMID:9731532 PMID:10500184 RGD:2306315 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IDA (PMID:18374910) MGI PMID:18374910 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP
IGI		 (PMID:24058167) MGI PMID:24058167 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tbx2 T-box 2 involved_in IGI (MGI:5805984|PMID:27720610) UniProt PMID:27720610 MGI:5805984 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tmem67 transmembrane protein 67 involved_in IMP (MGI:5648757|PMID:26035863) UniProt PMID:26035863 MGI:5648757 NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,355...12,090,020 		JBrowse link
establishment of animal organ orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx4 Iroquois homeobox 4 ISO RGD PMID:10882515 RGD:1582291 NCBI chr13:73,407,708...73,417,741
Ensembl chr13:73,408,598...73,417,727 		JBrowse link
G Wnt8a wingless-type MMTV integration site family, member 8A acts_upstream_of_or_within IMP (PMID:16256739) MGI PMID:16256739 NCBI chr18:34,675,380...34,681,114
Ensembl chr18:34,675,366...34,681,326 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 involved_in IMP (PMID:26114487) MGI PMID:26114487 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294 		JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 acts_upstream_of_or_within IMP (PMID:22076439) MGI PMID:22076439 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:19543268) MGI PMID:19543268 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
external genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:19653321) MGI PMID:19653321 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen, type V, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:27,776,393...27,929,522
Ensembl chr 2:27,776,437...27,929,526 		JBrowse link
G Col5a2 collagen, type V, alpha 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:45,413,491...45,542,442
Ensembl chr 1:45,413,481...45,542,442 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP (PMID:11456441) MGI PMID:11456441 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 involved_in ISO RGD
MGI		 PMID:22940085 GO_REF:0000096 MGI:4417868 RGD:10043154 NCBI chr 1:16,299,027...16,591,228
Ensembl chr 1:16,298,898...16,590,336 		JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in IDA (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated acts_upstream_of_or_within IMP (PMID:21052544)
(PMID:12915475)		 MGI PMID:12915475 PMID:21052544 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838 		JBrowse link
G Dzank1 double zinc ribbon and ankyrin repeat domains 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:144,312,475...144,369,427
Ensembl chr 2:144,312,477...144,369,334 		JBrowse link
G Fscn2 fascin actin-bundling protein 2 acts_upstream_of_or_within IMP (PMID:16043865) MGI PMID:16043865 NCBI chr11:120,250,991...120,258,999
Ensembl chr11:120,252,360...120,258,994 		JBrowse link
G Gabrr2 gamma-aminobutyric acid type A receptor subunit rho 2 NOT|acts_upstream_of_or_within IMP (PMID:12019334) MGI PMID:12019334 NCBI chr 4:33,057,715...33,095,865
Ensembl chr 4:33,062,999...33,095,865 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IMP (PMID:16249514) MGI PMID:16249514 NCBI chr 9:107,551,636...107,556,833
Ensembl chr 9:107,551,673...107,556,911 		JBrowse link
G Gngt1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 acts_upstream_of_or_within IMP (PMID:18367617) MGI PMID:18367617 NCBI chr 6:3,989,082...3,997,441
Ensembl chr 6:3,993,792...3,997,436 		JBrowse link
G Mfrp membrane frizzled-related protein acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr 9:44,013,067...44,020,484
Ensembl chr 9:44,013,026...44,020,484 		JBrowse link
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr 9:59,850,054...59,868,117
Ensembl chr 9:59,850,054...59,867,942 		JBrowse link
G Olfm3 olfactomedin 3 involved_in ISO RGD
MGI		 PMID:12019210 GO_REF:0000096 MGI:4417868 RGD:633402 NCBI chr 3:114,697,727...114,919,413
Ensembl chr 3:114,697,727...114,919,371 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:12648492) MGI PMID:12648492 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide acts_upstream_of_or_within IMP (PMID:25224828) MGI PMID:25224828 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain acts_upstream_of_or_within IMP (PMID:20463215) MGI PMID:20463215 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Prkci protein kinase C, iota acts_upstream_of_or_within IMP (PMID:16267237) MGI PMID:16267237 NCBI chr 3:31,049,893...31,106,889
Ensembl chr 3:31,049,896...31,107,108 		JBrowse link
G Rdh13 retinol dehydrogenase 13 (all-trans and 9-cis) acts_upstream_of_or_within IMP (PMID:22605914) MGI PMID:22605914 NCBI chr 7:4,428,664...4,474,279
Ensembl chr 7:4,427,769...4,448,648 		JBrowse link
G Rorb RAR-related orphan receptor beta involved_in IMP (MGI:3652638|PMID:16574740) UniProt PMID:16574740 MGI:3652638 NCBI chr19:18,907,966...19,088,560
Ensembl chr19:18,907,969...19,088,560 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within IMP (PMID:12651948) MGI PMID:12651948 NCBI chr  X:10,024,455...10,083,034
Ensembl chr  X:9,939,860...10,083,159 		JBrowse link
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 acts_upstream_of_or_within IMP (PMID:12651948) MGI PMID:12651948 NCBI chr14:52,341,698...52,398,796
Ensembl chr14:52,348,161...52,401,003 		JBrowse link
G Th tyrosine hydroxylase involved_in IMP (MGI:3617102|PMID:16445854) BHF-UCL PMID:16445854 MGI:3617102 NCBI chr 7:142,446,516...142,453,732
Ensembl chr 7:142,446,489...142,484,865 		JBrowse link
G Tulp1 TUB like protein 1 involved_in IMP (MGI:4397555|PMID:19218615) UniProt PMID:19218615 MGI:4397555 NCBI chr17:28,570,489...28,584,190
Ensembl chr17:28,570,489...28,584,196 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within IMP (PMID:16251428) MGI PMID:16251428 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding protein 1 involved_in IMP (MGI:3614720|PMID:16465590) UniProt PMID:16465590 MGI:3614720 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:100,982,188...101,129,031
Ensembl chr 9:100,982,283...101,128,994 		JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IMP (PMID:14625556) MGI PMID:14625556 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
female genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:12004962) MGI PMID:12004962 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in IMP (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:12368184) MGI PMID:12368184 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
female gonad morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 acts_upstream_of_or_within IMP (PMID:24739304) MGI PMID:24739304 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP
IDA
ISO		 (PMID:16720875) MGI PMID:16720875 GO_REF:0000008 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16720875) MGI PMID:16720875 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
foramen ovale closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:10969038) MGI PMID:10969038 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Tbx20 T-box 20 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
forebrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16613831) MGI PMID:16613831 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Gak cyclin G associated kinase acts_upstream_of_or_within IMP (PMID:18434600) MGI PMID:18434600 NCBI chr 5:108,716,973...108,777,643
Ensembl chr 5:108,717,277...108,777,621 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within IMP (PMID:10693795) MGI PMID:10693795 NCBI chr12:8,347,918...8,351,954
Ensembl chr12:8,347,918...8,351,954 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within IMP (PMID:9398437) MGI PMID:9398437 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (PMID:10882526), (PMID:9620767) MGI PMID:9620767 PMID:10882526 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:21445260) MGI PMID:21445260 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:19036983) MGI PMID:19036983 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:11297510) MGI PMID:11297510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (MGI:3629385|PMID:16675393) BHF-UCL PMID:16675393 MGI:3629385 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:31386652) MGI PMID:31386652 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584 		JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in IMP (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204 		JBrowse link
frontal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:20570969) MGI PMID:20570969 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IMP (PMID:10742104) MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO RGD PMID:12416537 RGD:2302805 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO RGD PMID:12416537 RGD:2302805 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISO RGD PMID:12416537 RGD:2302805 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
fungiform papilla formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:17128274) MGI PMID:17128274 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Shh sonic hedgehog involved_in ISO RGD
MGI		 PMID:15581865 GO_REF:0000096 MGI:4417868 RGD:1580345 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
fungiform papilla morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog involved_in ISO RGD
MGI		 PMID:15581865 GO_REF:0000096 MGI:4417868 RGD:1580345 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IMP (MGI:5448822|PMID:21978088) UniProt PMID:21978088 MGI:5448822 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (MGI:5448822|PMID:21978088) UniProt PMID:21978088 MGI:5448822 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:18635608) MGI PMID:18635608 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Neurog1 neurogenin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (PMID:25012822) MGI PMID:25012822 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,318,917...56,326,816
Ensembl chr13:56,321,517...56,326,698 		JBrowse link
gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:7812968) MGI PMID:7812968 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Ezr ezrin NOT|involved_in ISO (PMID:24862762) UniProt PMID:24862762 NCBI chr17:7,005,530...7,050,179
Ensembl chr17:7,005,440...7,050,183 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:17202188) MGI PMID:17202188 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within IMP (PMID:11356025) MGI PMID:11356025 NCBI chr12:8,347,918...8,351,954
Ensembl chr12:8,347,918...8,351,954 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP (PMID:9097018) MGI PMID:9097018 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Msn moesin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:95,139,651...95,212,159
Ensembl chr  X:95,139,648...95,212,158 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:115,054,138...115,072,009
Ensembl chr11:115,054,167...115,072,007 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within IMP (PMID:10926756) MGI PMID:10926756 NCBI chr19:43,600,764...43,604,331
Ensembl chr19:43,600,764...43,604,331 		JBrowse link
G Plag1 pleiomorphic adenoma gene 1 acts_upstream_of_or_within IMP (PMID:15606491) MGI PMID:15606491 NCBI chr 4:3,895,209...3,938,429
Ensembl chr 4:3,900,996...3,938,423 		JBrowse link
gonad morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgav integrin alpha V involved_in NAS (MGI:3625462|PMID:16571912) BHF-UCL PMID:16571912 MGI:3625462 NCBI chr 2:83,554,796...83,637,261
Ensembl chr 2:83,554,741...83,637,260 		JBrowse link
G Lhx9 LIM homeobox protein 9 acts_upstream_of_or_within IMP (PMID:10706291) MGI PMID:10706291 NCBI chr 1:138,752,924...138,776,577
Ensembl chr 1:138,752,924...138,776,315 		JBrowse link
growth involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:4947514|PMID:20007915) BHF-UCL PMID:20007915 MGI:4947514 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
growth plate cartilage axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stc1 stanniocalcin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:69,266,738...69,278,850
Ensembl chr14:69,266,687...69,279,253 		JBrowse link
growth plate cartilage chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col27a1 collagen, type XXVII, alpha 1 acts_upstream_of_or_within IMP (PMID:22206015) MGI PMID:22206015 NCBI chr 4:63,132,246...63,253,228
Ensembl chr 4:63,132,241...63,253,228 		JBrowse link
G Poc1a POC1 centriolar protein A acts_upstream_of_or_within IMP (PMID:26496357) MGI PMID:26496357 NCBI chr 9:106,156,177...106,227,721
Ensembl chr 9:106,158,260...106,227,720 		JBrowse link
growth plate cartilage chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IMP (PMID:18638549) MGI PMID:18638549 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:26098911) MGI PMID:26098911 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Nppc natriuretic peptide type C involved_in IMP (MGI:2177134|PMID:11259675) UniProt PMID:11259675 MGI:2177134 NCBI chr 1:86,594,015...86,598,295
Ensembl chr 1:86,594,013...86,598,293 		JBrowse link
growth plate cartilage chondrocyte growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst5 cystatin D involved_in IMP (PMID:16680148) MGI PMID:16680148 NCBI chr 2:149,247,242...149,252,217
Ensembl chr 2:149,246,977...149,252,213 		JBrowse link
G Rarg retinoic acid receptor, gamma involved_in IMP (MGI:3848572|PMID:19389355) UniProt PMID:19389355 MGI:3848572 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IMP (MGI:5317468|PMID:22421045) UniProt PMID:22421045 MGI:5317468 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:21420963) MGI PMID:21420963 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
growth plate cartilage chondrocyte morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Matn1 matrilin 1, cartilage matrix protein acts_upstream_of_or_within IMP (PMID:16877353) MGI PMID:16877353 NCBI chr 4:130,671,696...130,682,787
Ensembl chr 4:130,671,696...130,682,786 		JBrowse link
growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IMP (PMID:18638549) MGI PMID:18638549 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist involved_in IEP (MGI:5315688|PMID:19113921) BHF-UCL PMID:19113921 MGI:5315688 NCBI chr 4:82,799,988...82,803,388
Ensembl chr 4:82,799,988...82,803,385 		JBrowse link
G Nppc natriuretic peptide type C involved_in IMP (MGI:2177134|PMID:11259675) UniProt PMID:11259675 MGI:2177134 NCBI chr 1:86,594,015...86,598,295
Ensembl chr 1:86,594,013...86,598,293 		JBrowse link
growth plate cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen, type II, alpha 1 ISO spheno-occipital synchondrosis RGD PMID:20591638 RGD:8661256 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Col9a1 collagen, type IX, alpha 1 acts_upstream_of_or_within IGI
IMP		 (PMID:18467703)
(PMID:18191556)		 MGI PMID:18191556 PMID:18467703 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765 		JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within IGI
IMP		 (PMID:18191556)
(PMID:17588960)
(PMID:18467703)		 MGI PMID:17588960 PMID:18191556 PMID:18467703 NCBI chr 8:70,826,186...70,834,721
Ensembl chr 8:70,826,208...70,834,716 		JBrowse link
G Fosl2 fos-like antigen 2 acts_upstream_of_or_within IMP (PMID:15509771) MGI PMID:15509771 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:26098911) MGI PMID:26098911 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Mmp13 matrix metallopeptidase 13 acts_upstream_of_or_within IGI (PMID:21444811) MGI PMID:21444811 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IMP (PMID:23065701)
(PMID:17728275)		 MGI PMID:17728275 PMID:23065701 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within IGI (PMID:19389355) MGI PMID:19389355 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within IGI (PMID:19389355) MGI PMID:19389355 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IGI (PMID:19389355) MGI PMID:19389355 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IGI (PMID:21420963) MGI PMID:21420963 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Thbs1 thrombospondin 1 acts_upstream_of_or_within IMP
IGI		 (PMID:18467703) MGI PMID:18467703 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614 		JBrowse link
G Thbs3 thrombospondin 3 acts_upstream_of_or_within IMP
IGI		 (PMID:18467703) MGI PMID:18467703 NCBI chr 3:89,122,470...89,134,148
Ensembl chr 3:89,122,487...89,134,144 		JBrowse link
G Zmpste24 zinc metallopeptidase, STE24 acts_upstream_of_or_within IMP (PMID:11923874) MGI PMID:11923874 NCBI chr 4:120,916,434...120,955,452
Ensembl chr 4:120,916,434...120,955,438 		JBrowse link
heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:26295701) MGI PMID:26295701 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:16943278) MGI PMID:16943278 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Emp2 epithelial membrane protein 2 involved_in IMP (MGI:6443292|PMID:30773261) UniProt PMID:30773261 MGI:6443292 NCBI chr16:10,099,613...10,131,832
Ensembl chr16:10,099,613...10,131,832 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:19654211) MGI PMID:19654211 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Lemd2 LEM domain containing 2 involved_in IMP (MGI:5640886|PMID:25790465) UniProt PMID:25790465 MGI:5640886 NCBI chr17:27,408,574...27,426,228
Ensembl chr17:27,408,574...27,423,443 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO		 (MGI:5571640|PMID:24584570), (MGI:5817050|PMID:27630136), (MGI:6162809|PMID:29895960), (MGI:6472247|PMID:33110103), (MGI:6885606|PMID:35041844), (MGI:7266785|PMID:35394688) UniProt
MGI		 PMID:24584570 PMID:27630136 PMID:29895960 PMID:33110103 PMID:35041844 More... GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5571640 MGI:5817050 MGI:6162809 MGI:6472247 MGI:6885606 MGI:7266785 NCBI chr19:53,649,422...53,855,514
Ensembl chr19:53,665,737...53,855,511 		JBrowse link
heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IDA (MGI:3835736|PMID:18297060) BHF-UCL PMID:18297060 MGI:3835736 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
G Gata5 GATA binding protein 5 involved_in IMP (MGI:5286818|PMID:21633169) BHF-UCL PMID:21633169 MGI:5286818 NCBI chr 2:179,966,881...179,977,296
Ensembl chr 2:179,966,926...179,976,492 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:3835736|PMID:18297060), (MGI:4441249|PMID:18593560) BHF-UCL PMID:18297060 PMID:18593560 MGI:3835736 MGI:4441249 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Pou5f1 POU domain, class 5, transcription factor 1 involved_in ISO (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr17:35,816,929...35,821,674
Ensembl chr17:35,816,915...35,821,669 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in TAS (MGI:3056004|PMID:15466160) BHF-UCL PMID:15466160 MGI:3056004 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IDA (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in IDA (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,208,713 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Aplnr apelin receptor involved_in IMP (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267 		JBrowse link
G Arl13b ADP-ribosylation factor-like 13B acts_upstream_of_or_within IMP (PMID:22554696) MGI PMID:22554696 NCBI chr16:62,613,671...62,667,418
Ensembl chr16:62,614,048...62,667,403 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in IMP (MGI:6717247|PMID:32179481) UniProt PMID:32179481 MGI:6717247 NCBI chr12:103,287,401...103,322,260
Ensembl chr12:103,287,401...103,322,260 		JBrowse link
G C2cd3 C2 calcium-dependent domain containing 3 acts_upstream_of_or_within IMP (PMID:19004860) MGI PMID:19004860 NCBI chr 7:100,021,440...100,119,366
Ensembl chr 7:100,021,440...100,119,359 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:102,772,050...102,776,042
Ensembl chr11:102,772,030...102,776,042 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:119,119,328...119,156,074
Ensembl chr11:119,119,398...119,156,064 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:15750185) MGI PMID:15750185 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within IMP (PMID:23742838) MGI PMID:23742838 NCBI chr16:3,725,058...3,760,163
Ensembl chr16:3,726,665...3,759,011 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:120,301,974...120,325,193
Ensembl chr 8:120,301,974...120,325,193 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IGI (MGI:5439040|PMID:22841628) BHF-UCL PMID:22841628 MGI:5439040 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IGI (MGI:5439040|PMID:22841628) BHF-UCL PMID:22841628 MGI:5439040 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Eng endoglin involved_in IMP (MGI:1337912|PMID:10348742), (MGI:4368063|PMID:19703439) BHF-UCL PMID:10348742 PMID:19703439 MGI:1337912 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:10411502) MGI PMID:10411502 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Folr1 folate receptor alpha involved_in IMP (MGI:3721767|PMID:17286298) BHF-UCL PMID:17286298 MGI:3721767 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (MGI:3052615|PMID:15310850) BHF-UCL PMID:15310850 MGI:3052615 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (PMID:9486664) MGI PMID:9486664 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IMP (PMID:9500551) MGI PMID:9500551 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:9171826) MGI PMID:9171826 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:14659802) MGI PMID:14659802 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within IMP (PMID:18930042) MGI PMID:18930042 NCBI chr 5:31,410,623...31,448,458
Ensembl chr 5:31,410,621...31,448,460 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within IMP (PMID:15930098) MGI PMID:15930098 NCBI chr 2:162,859,200...162,888,075
Ensembl chr 2:162,859,274...162,888,061 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within IMP (PMID:17027958) MGI PMID:17027958 NCBI chr16:49,519,657...49,585,489
Ensembl chr16:49,519,596...49,585,489 		JBrowse link
G Ihh Indian hedgehog involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A acts_upstream_of_or_within IMP (PMID:25463925) MGI PMID:25463925 NCBI chr19:4,366,172...4,448,749
Ensembl chr19:4,364,447...4,448,313 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within IMP (PMID:10330409) MGI PMID:10330409 NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within IMP (PMID:12522123) MGI PMID:12522123 NCBI chr19:45,221,123...45,225,280
Ensembl chr19:45,221,123...45,224,251 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in IMP (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within IMP (PMID:16000382) MGI PMID:16000382 NCBI chr18:10,725,523...10,822,969
Ensembl chr18:10,725,548...10,818,704 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:16510504)
(PMID:7628699), (PMID:9192865)		 MGI PMID:7628699 PMID:9192865 PMID:16510504 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IGI (PMID:16496285) MGI PMID:16496285 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Notch1 notch 1 involved_in IGI (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch2 notch 2 involved_in IGI (MGI:2661305|PMID:12730124) BHF-UCL PMID:12730124 MGI:2661305 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within IMP (PMID:17884984) MGI PMID:17884984 NCBI chr 6:85,400,851...85,405,859
Ensembl chr 6:85,400,868...85,405,859 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:17573777) MGI PMID:17573777 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IGI (PMID:10557208) MGI PMID:10557208 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in TAS (MGI:3056004|PMID:15466160) BHF-UCL PMID:15466160 MGI:3056004 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Shh sonic hedgehog involved_in
acts_upstream_of_or_within		 IMP (MGI:5142377|PMID:11517919)
(PMID:10411502), (PMID:10500184)		 BHF-UCL
MGI		 PMID:10411502 PMID:10500184 PMID:11517919 MGI:5142377 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IGI (PMID:15183723) MGI PMID:15183723 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in
acts_upstream_of_or_within		 IMP (MGI:3716378|PMID:17655922)
(PMID:17610846)		 UniProt
MGI		 PMID:17610846 PMID:17655922 MGI:3716378 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:15929941) MGI PMID:15929941 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Stil Scl/Tal1 interrupting locus acts_upstream_of_or_within IMP (PMID:10385121) MGI PMID:10385121 NCBI chr 4:114,857,287...114,900,404
Ensembl chr 4:114,857,356...114,900,393 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IMP (PMID:16155214) MGI PMID:16155214 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
G Tbx20 T-box 20 involved_in
acts_upstream_of_or_within		 IMP
IBA		 (MGI:3604925|PMID:15843409)
(PMID:15901664)
(PMID:15843407)		 BHF-UCL
GO_Central
MGI		 PMID:15843407 PMID:15843409 PMID:15901664 GO_REF:0000033 MGI:3604925 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:18723448)
(PMID:17460765)		 MGI PMID:17460765 PMID:18723448 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tbx6 T-box 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:126,380,655...126,384,720
Ensembl chr 7:126,380,655...126,384,732 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within IMP (PMID:20178780) MGI PMID:20178780 NCBI chr 5:124,678,835...124,688,566
Ensembl chr 5:124,678,758...124,688,569 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 involved_in IMP (MGI:2157686|PMID:11440971) UniProt PMID:11440971 MGI:2157686 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:16291790) MGI PMID:16291790 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:19795512) MGI PMID:19795512 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI		 (PMID:15384171)
(PMID:16496285)		 MGI PMID:15384171 PMID:16496285 GO_REF:0000119 MGI:4834177 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP-binding cassette, sub-family C member 9 acts_upstream_of_or_within IGI
IMP		 (PMID:31821173)
(PMID:30089727)		 MGI PMID:30089727 PMID:31821173 NCBI chr 6:142,533,592...142,648,472
Ensembl chr 6:142,533,588...142,648,041 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 acts_upstream_of_or_within IMP (PMID:11245568) MGI PMID:11245568 NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525 		JBrowse link
G Alpk2 alpha-kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:65,398,600...65,526,959
Ensembl chr18:65,398,600...65,527,137 		JBrowse link
G Arid2 AT-rich interaction domain 2 acts_upstream_of_or_within IMP (PMID:25299188) MGI PMID:25299188 NCBI chr15:96,185,403...96,303,344
Ensembl chr15:96,185,399...96,302,873 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 acts_upstream_of_or_within IMP (PMID:24860998) MGI PMID:24860998 NCBI chr 2:153,187,750...153,245,927
Ensembl chr 2:153,187,749...153,245,927 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within IMP (PMID:24860998) MGI PMID:24860998 NCBI chr12:3,476,892...3,560,811
Ensembl chr12:3,476,857...3,556,852 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:17359964) MGI PMID:17359964 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Ccm2l cerebral cavernous malformation 2-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:152,907,857...152,923,655
Ensembl chr 2:152,907,875...152,923,655 		JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within IMP (PMID:19139267) MGI PMID:19139267 NCBI chr13:96,679,243...96,782,362
Ensembl chr13:96,679,243...96,776,675 		JBrowse link
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:16207732) MGI
GO_Central		 PMID:16207732 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IGI (PMID:17029294) MGI PMID:17029294 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:7590256) MGI PMID:7590256 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Col5a1 collagen, type V, alpha 1 acts_upstream_of_or_within IGI (PMID:17029294) MGI PMID:17029294 NCBI chr 2:27,776,393...27,929,522
Ensembl chr 2:27,776,437...27,929,526 		JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within IMP (PMID:19797173) MGI PMID:19797173 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Dchs1 dachsous cadherin related 1 acts_upstream_of_or_within IMP (PMID:21303848) MGI PMID:21303848 NCBI chr 7:105,402,196...105,437,562
Ensembl chr 7:105,402,197...105,436,861 		JBrowse link
G Dlc1 deleted in liver cancer 1 acts_upstream_of_or_within IMP (PMID:15710412) MGI PMID:15710412 NCBI chr 8:37,034,893...37,420,343
Ensembl chr 8:37,034,905...37,420,297 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within IGI (PMID:19008950) MGI PMID:19008950 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within IGI (PMID:19008950) MGI PMID:19008950 NCBI chr16:20,335,694...20,352,763
Ensembl chr16:20,335,732...20,352,760 		JBrowse link
G Ephb4 Eph receptor B4 involved_in IMP (MGI:1345938|PMID:10518221) UniProt PMID:10518221 MGI:1345938 NCBI chr 5:137,348,371...137,372,784
Ensembl chr 5:137,348,371...137,376,931 		JBrowse link
G Epo erythropoietin involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504 		JBrowse link
G Epor erythropoietin receptor involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802 		JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within IMP (PMID:21303848) MGI PMID:21303848 NCBI chr 3:38,939,867...39,066,134
Ensembl chr 3:38,941,089...39,066,134 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:16696966) MGI PMID:16696966 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fkbp1a FK506 binding protein 1a involved_in IMP (MGI:1195585|PMID:9461216) BHF-UCL PMID:9461216 MGI:1195585 NCBI chr 2:151,384,403...151,403,611
Ensembl chr 2:151,384,403...151,403,612 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:27711214) MGI PMID:27711214 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Flna filamin, alpha involved_in IMP (MGI:3699024|PMID:17172441) UniProt PMID:17172441 MGI:3699024 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426 		JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in IMP (MGI:4950310|PMID:21350012) UniProt PMID:21350012 MGI:4950310 NCBI chr12:95,658,780...95,751,989
Ensembl chr12:95,659,000...95,751,989 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within IGI (PMID:16839542) MGI PMID:16839542 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IGI (PMID:16839542) MGI PMID:16839542 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Gaa glucosidase, alpha, acid acts_upstream_of_or_within IMP (PMID:9384603) MGI PMID:9384603 NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280 		JBrowse link
G Gata4 GATA binding protein 4 involved_in IMP (MGI:3763665|PMID:17975667) BHF-UCL PMID:17975667 MGI:3763665 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in NAS
TAS		 (MGI:4359361|PMID:17891141)
(MGI:3511603|PMID:15509787)		 UniProt
BHF-UCL		 PMID:15509787 PMID:17891141 MGI:3511603 MGI:4359361 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IMP (PMID:11784028) MGI PMID:11784028 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Htr2b 5-hydroxytryptamine (serotonin) receptor 2B involved_in IMP (MGI:707955|PMID:9165122) UniProt PMID:9165122 MGI:707955 NCBI chr 1:86,025,268...86,043,960
Ensembl chr 1:86,026,748...86,039,692 		JBrowse link
G Insr insulin receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain acts_upstream_of_or_within IGI (PMID:16687132) MGI PMID:16687132 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Kat6a K(lysine) acetyltransferase 6A acts_upstream_of_or_within IMP
IGI		 (PMID:22921202) MGI PMID:22921202 NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275 		JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within IMP
IGI		 (PMID:30089727)
(PMID:31821173)		 MGI PMID:30089727 PMID:31821173 NCBI chr 6:142,510,563...142,517,340
Ensembl chr 6:142,510,563...142,517,340 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A acts_upstream_of_or_within IMP (PMID:23028370) MGI PMID:23028370 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Lefty1 left right determination factor 1 involved_in IMP (MGI:1277589|PMID:9708732) BHF-UCL PMID:9708732 MGI:1277589 NCBI chr 1:180,762,587...180,765,966
Ensembl chr 1:180,762,587...180,765,965 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:10393122) GO_Central
MGI		 PMID:10393122 GO_REF:0000033 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Mesp2 mesoderm posterior 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:79,460,475...79,463,179
Ensembl chr 7:79,460,475...79,463,187 		JBrowse link
G Mir1a-2 microRNA 1a-2 acts_upstream_of_or_within IMP (PMID:17397913) MGI PMID:17397913 NCBI chr18:10,785,481...10,785,552
Ensembl chr18:10,785,481...10,785,552 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within IMP (PMID:17183527) MGI PMID:17183527 NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IGI (PMID:17601530) MGI PMID:17601530 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within IMP (PMID:25139234) MGI PMID:25139234 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Mybpc3 myosin binding protein C, cardiac involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:10545522)
(PMID:10532952)		 MGI PMID:10532952 PMID:10545522 GO_REF:0000119 MGI:4834177 NCBI chr 2:90,948,459...90,966,862
Ensembl chr 2:90,948,489...90,966,861 		JBrowse link
G Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow acts_upstream_of_or_within IGI (PMID:15308581) MGI PMID:15308581 NCBI chr 5:122,230,787...122,251,536
Ensembl chr 5:122,239,014...122,251,535 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within IGI
IMP		 (PMID:18347093) MGI PMID:18347093 NCBI chr 5:125,094,217...125,256,302
Ensembl chr 5:125,094,217...125,256,283 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IMP (MGI:3783941|PMID:17234970)
(PMID:11784028)		 BHF-UCL
MGI		 PMID:11784028 PMID:17234970 MGI:3783941 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Pbrm1 polybromo 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within IMP (PMID:19412548) MGI PMID:19412548 NCBI chr 5:65,763,062...65,855,579
Ensembl chr 5:65,763,064...65,855,616 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (PMID:9262482) MGI PMID:9262482 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rxra retinoid X receptor alpha involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969 		JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 acts_upstream_of_or_within IGI (PMID:15308581) MGI PMID:15308581 NCBI chr17:81,680,534...82,045,816
Ensembl chr17:81,680,534...82,045,806 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 acts_upstream_of_or_within IMP (PMID:15525990) MGI PMID:15525990 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IGI (PMID:16687132) MGI PMID:16687132 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IMP (PMID:9030684) MGI PMID:9030684 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882 		JBrowse link
G Synpo2l synaptopodin 2-like involved_in IMP (MGI:6102963|PMID:29206857) BHF-UCL PMID:29206857 MGI:6102963 NCBI chr14:20,709,013...20,718,422
Ensembl chr14:20,709,014...20,718,422 		JBrowse link
G T brachyury, T-box transcription factor T involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328 		JBrowse link
G Tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 acts_upstream_of_or_within IMP (PMID:12464436) MGI PMID:12464436 NCBI chr15:80,017,333...80,045,908
Ensembl chr15:80,017,328...80,045,908 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in IMP (MGI:4868510|PMID:21068380) UniProt PMID:21068380 MGI:4868510 NCBI chr  X:73,325,498...73,340,182
Ensembl chr  X:73,325,518...73,333,757 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:16696966)
(PMID:15190012)
(PMID:16914493)
(PMID:15175244)		 MGI PMID:15175244 PMID:15190012 PMID:16696966 PMID:16914493 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx19 T-box 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:164,965,403...164,988,342
Ensembl chr 1:164,965,424...164,988,342 		JBrowse link
G Tbx2 T-box 2 acts_upstream_of_or_within IMP (PMID:15459098) MGI PMID:15459098 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:17473172) MGI PMID:17473172 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (PMID:15254239) MGI PMID:15254239 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802 		JBrowse link
G Ttn titin acts_upstream_of_or_within IMP (PMID:16702235) MGI PMID:16702235 NCBI chr 2:76,534,324...76,812,901
Ensembl chr 2:76,534,324...76,812,891 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within IMP (PMID:23028370) MGI PMID:23028370 NCBI chr  Y:1,085,187...1,245,787
Ensembl chr  Y:1,096,861...1,245,759 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within IMP (PMID:10229225) MGI PMID:10229225 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Xirp1 xin actin-binding repeat containing 1 acts_upstream_of_or_within ISA (PMID:10021346) MGI PMID:10021346 NCBI chr 9:119,842,821...119,852,660
Ensembl chr 9:119,842,821...119,852,664 		JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 acts_upstream_of_or_within IMP (PMID:17967885) MGI PMID:17967885 NCBI chr14:25,458,299...25,667,167
Ensembl chr14:25,459,609...25,667,167 		JBrowse link
G Zmpste24 zinc metallopeptidase, STE24 acts_upstream_of_or_within IMP (PMID:11923874) MGI PMID:11923874 NCBI chr 4:120,916,434...120,955,452
Ensembl chr 4:120,916,434...120,955,438 		JBrowse link
heart trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 acts_upstream_of_or_within IMP (PMID:18267097) MGI PMID:18267097 NCBI chr16:85,590,715...85,600,001
Ensembl chr16:85,590,715...85,600,001 		JBrowse link
G Adgrg6 adhesion G protein-coupled receptor G6 involved_in IMP
IBA		 (MGI:5516409|PMID:24082093) UniProt
GO_Central		 PMID:24082093 GO_REF:0000033 MGI:5516409 NCBI chr10:14,278,327...14,421,467
Ensembl chr10:14,278,327...14,421,403 		JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IMP (MGI:3040529|PMID:15073151) BHF-UCL PMID:15073151 MGI:3040529 NCBI chr 6:87,405,976...87,411,494
Ensembl chr 6:87,405,976...87,414,659 		JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within IMP (PMID:19535499) MGI PMID:19535499 NCBI chr 6:112,436,466...112,449,833
Ensembl chr 6:112,436,466...112,449,833 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 acts_upstream_of_or_within IMP (PMID:16966370) MGI PMID:16966370 NCBI chr 8:125,635,325...125,676,063
Ensembl chr 8:125,635,326...125,676,063 		JBrowse link
G Fhl2 four and a half LIM domains 2 involved_in IEP (MGI:3511603|PMID:15509787) BHF-UCL PMID:15509787 MGI:3511603 NCBI chr 1:43,162,233...43,237,501
Ensembl chr 1:43,162,234...43,236,144 		JBrowse link
G Fkbp1a FK506 binding protein 1a involved_in IMP (MGI:1195585|PMID:9461216) BHF-UCL PMID:9461216 MGI:1195585 NCBI chr 2:151,384,403...151,403,611
Ensembl chr 2:151,384,403...151,403,612 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:3703467|PMID:17259303) BHF-UCL PMID:17259303 MGI:3703467 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:16510504) MGI PMID:16510504 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Ovol2 ovo like zinc finger 2 acts_upstream_of_or_within IMP (PMID:17573777) MGI PMID:17573777 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066 		JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in IMP (MGI:2655947|PMID:12663486) BHF-UCL PMID:12663486 MGI:2655947 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IGI (PMID:18267097) MGI PMID:18267097 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:15569937) MGI PMID:15569937 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Tek TEK receptor tyrosine kinase involved_in IMP (MGI:68132|PMID:7958865) UniProt PMID:7958865 MGI:68132 NCBI chr 4:94,627,322...94,763,213
Ensembl chr 4:94,627,526...94,763,213 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IMP (MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:2663364 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta involved_in IDA
ISO		 (MGI:3778721|PMID:10635333) UniProt
MGI		 PMID:10635333 GO_REF:0000096 MGI:3778721 MGI:4417868 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338 		JBrowse link
G Fgl1 fibrinogen-like protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:41,644,471...41,671,015
Ensembl chr 8:41,644,471...41,668,193 		JBrowse link
G Il6 interleukin 6 involved_in IMP (MGI:84432|PMID:8910279) UniProt PMID:8910279 MGI:84432 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Mki67 antigen identified by monoclonal antibody Ki 67 acts_upstream_of_or_within IDA (PMID:25446530) MGI PMID:25446530 NCBI chr 7:135,291,513...135,318,286
Ensembl chr 7:135,291,513...135,318,090 		JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IMP (PMID:25446530) MGI PMID:25446530 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 ISO RGD PMID:29138817 RGD:15042871 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447 		JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within IMP (PMID:10888866) MGI PMID:10888866 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Rps6ka1 ribosomal protein S6 kinase polypeptide 1 involved_in IDA (MGI:3778721|PMID:10635333) UniProt PMID:10635333 MGI:3778721 NCBI chr 4:133,574,601...133,615,466
Ensembl chr 4:133,574,601...133,615,108 		JBrowse link
G Tgfa transforming growth factor alpha involved_in IDA
ISO		 (MGI:3778721|PMID:10635333) UniProt
MGI		 PMID:10635333 GO_REF:0000096 MGI:3778721 MGI:4417868 NCBI chr 6:86,172,020...86,252,726
Ensembl chr 6:86,172,205...86,252,701 		JBrowse link
hypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prop1 paired like homeodomain factor 1 acts_upstream_of_or_within IMP (PMID:16678101) MGI PMID:16678101 NCBI chr11:50,841,633...50,844,584
Ensembl chr11:50,841,633...50,844,592 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:15037319) MGI PMID:15037319 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
inferior endocardial cushion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
inner ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene acts_upstream_of_or_within IGI (PMID:11921339) MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IMP (PMID:23536097) MGI PMID:23536097 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:15543141)
(PMID:16145671)		 MGI PMID:15543141 PMID:16145671 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 acts_upstream_of_or_within IMP (PMID:9668038) MGI PMID:9668038 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Atp6v1b1 ATPase, H+ transporting, lysosomal V1 subunit B1 involved_in
NOT|involved_in		 ISO
IMP		 (PMID:19639346)
(MGI:2669353|PMID:12782355)		 UniProt
UniProt		 PMID:12782355 PMID:19639346 MGI:2669353 NCBI chr 6:83,719,999...83,735,837
Ensembl chr 6:83,719,972...83,735,837 		JBrowse link
G Atp8a2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 involved_in IMP (MGI:5574432|PMID:24413176) UniProt PMID:24413176 MGI:5574432 NCBI chr14:59,884,980...60,324,363
Ensembl chr14:59,875,989...60,434,628 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within IGI (PMID:11921339) MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753 		JBrowse link
G Cdh23 cadherin related 23 (otocadherin) acts_upstream_of_or_within IMP (PMID:15925194)
(PMID:7610888)		 MGI PMID:7610888 PMID:15925194 MGI:61210 NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within IMP (PMID:12842012) MGI PMID:12842012 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 ISO
IMP
IBA		 (PMID:15353999) MGI
GO_Central		 PMID:15353999 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Chrna10 cholinergic receptor, nicotinic, alpha polypeptide 10 acts_upstream_of_or_within IMP (PMID:18077337) MGI PMID:18077337 NCBI chr 7:101,760,469...101,766,564
Ensembl chr 7:101,760,473...101,766,035 		JBrowse link
G Chrna9 cholinergic receptor, nicotinic, alpha polypeptide 9 acts_upstream_of_or_within IMP (PMID:18077337) MGI PMID:18077337 NCBI chr 5:66,092,317...66,134,823
Ensembl chr 5:66,092,264...66,134,669 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:1952599) MGI PMID:1952599 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:9165353) MGI PMID:9165353 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in NAS (MGI:1321372|PMID:9858718) UniProt PMID:9858718 MGI:1321372 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dlx5 distal-less homeobox 5 acts_upstream_of_or_within IMP
IGI		 (PMID:12142028)
(PMID:16900517)		 MGI PMID:12142028 PMID:16900517 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Dlx6 distal-less homeobox 6 acts_upstream_of_or_within IGI (PMID:16900517) MGI PMID:16900517 NCBI chr 6:6,863,272...6,867,965
Ensembl chr 6:6,863,334...6,868,568 		JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP (MGI:1859095|PMID:10839360) UniProt PMID:10839360 MGI:1859095 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP
IGI		 (PMID:15817220)
(PMID:16916509)
(PMID:10471511)		 MGI PMID:10471511 PMID:15817220 PMID:16916509 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI
IMP		 (PMID:16691564)
(PMID:11062007)		 MGI PMID:11062007 PMID:16691564 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:15809037) MGI PMID:15809037 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within IMP (PMID:15328018) MGI PMID:15328018 NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:12194867) MGI PMID:12194867 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:10934262) MGI PMID:10934262 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within IGI
IMP		 (PMID:16691564) MGI PMID:16691564 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Foxi1 forkhead box I1 acts_upstream_of_or_within IMP (PMID:12642503) MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of_or_within IGI
IDA		 (PMID:18991062) MGI PMID:18991062 NCBI chr 2:80,242,314...80,277,740
Ensembl chr 2:80,242,314...80,277,969 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within IGI (PMID:16495441) MGI PMID:16495441 NCBI chr14:65,429,890...65,499,912
Ensembl chr14:65,429,898...65,499,912 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within IGI (PMID:16495441) MGI PMID:16495441 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IMP (PMID:20652952) MGI PMID:20652952 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IMP (PMID:21553382)
(PMID:11135239)		 MGI PMID:11135239 PMID:21553382 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within IMP (PMID:15829521), (PMID:15996652) MGI PMID:15829521 PMID:15996652 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Gfi1 growth factor independent 1 transcription repressor acts_upstream_of_or_within IMP (PMID:12441305) MGI PMID:12441305 NCBI chr 5:107,864,521...107,873,671
Ensembl chr 5:107,864,523...107,873,902 		JBrowse link
G Hmx2 H6 homeobox 2 acts_upstream_of_or_within IMP
IGI		 (PMID:11748138)
(PMID:15363417)		 MGI PMID:11748138 PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743 		JBrowse link
G Hmx3 H6 homeobox 3 acts_upstream_of_or_within IGI
IMP		 (PMID:15363417)
(PMID:9435283)		 MGI PMID:9435283 PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within IMP (PMID:15367676) MGI PMID:15367676 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 5:28,276,410...28,283,660
Ensembl chr 5:28,276,361...28,283,660 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 1:121,232,082...121,260,391
Ensembl chr 1:121,232,082...121,260,318 		JBrowse link
G Itga8 integrin alpha 8 acts_upstream_of_or_within IMP (PMID:10742111) MGI PMID:10742111 NCBI chr 2:12,111,443...12,306,755
Ensembl chr 2:12,111,443...12,306,733 		JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 involved_in IMP (PMID:11226272) MGI PMID:11226272 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779 		JBrowse link
G Kcnq4 potassium voltage-gated channel, subfamily Q, member 4 acts_upstream_of_or_within IMP (PMID:16437162) MGI PMID:16437162 NCBI chr 4:120,553,331...120,605,809
Ensembl chr 4:120,553,335...120,605,809 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:16325169) MGI PMID:16325169 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
G Myo15a myosin XVA acts_upstream_of_or_within IMP (PMID:11718241), (PMID:14724386) MGI PMID:11718241 PMID:14724386 NCBI chr11:60,360,165...60,419,195
Ensembl chr11:60,360,165...60,419,195 		JBrowse link
G Myo6 myosin VI involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:7493015) GO_Central
MGI		 PMID:7493015 GO_REF:0000033 NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011 		JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within IMP (PMID:15389316)
(PMID:11753415)
(PMID:5795329)		 MGI PMID:5795329 PMID:11753415 PMID:15389316 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731 		JBrowse link
G Neurog1 neurogenin 1 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:16145671) MGI PMID:16145671 GO_REF:0000119 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within IMP (PMID:11784868) MGI PMID:11784868 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447 		JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within IMP (PMID:17616930) MGI PMID:17616930 NCBI chr11:68,100,190...68,277,652
Ensembl chr11:68,100,190...68,291,649 		JBrowse link
G Otop1 otopetrin 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12651873) GO_Central
MGI		 PMID:12651873 GO_REF:0000033 NCBI chr 5:38,434,748...38,461,560
Ensembl chr 5:38,433,316...38,461,552 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within IGI
IMP		 (PMID:10225993) MGI PMID:10225993 NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within IGI (PMID:10225993) MGI PMID:10225993 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:84247|PMID:8951055)
(PMID:16916509)
(PMID:15242798)
(MGI:4822275|PMID:20727173)		 DFLAT
MGI
UniProt		 PMID:8951055 PMID:15242798 PMID:16916509 PMID:20727173 MGI:4822275 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IGI (MGI:4822275|PMID:20727173) UniProt PMID:20727173 MGI:4822275 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pou4f3 POU domain, class 4, transcription factor 3 acts_upstream_of_or_within IMP (PMID:12585968) MGI PMID:12585968 NCBI chr18:42,527,662...42,529,158
Ensembl chr18:42,527,604...42,530,314 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Ptprq protein tyrosine phosphatase receptor type Q acts_upstream_of_or_within IMP (PMID:14534255) MGI PMID:14534255 NCBI chr10:107,350,224...107,555,939
Ensembl chr10:107,352,910...107,555,912 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within IMP (PMID:18606138) MGI PMID:18606138 NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 acts_upstream_of_or_within IGI (PMID:15788460) MGI PMID:15788460 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within IMP (PMID:19936227) MGI PMID:19936227 NCBI chr14:110,984,770...110,992,640
Ensembl chr14:110,986,012...110,992,581 		JBrowse link
G Sobp sine oculis binding protein acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:16962269) MGI
GO_Central		 PMID:16962269 GO_REF:0000033 NCBI chr10:42,878,484...43,059,144
Ensembl chr10:42,878,496...43,050,526 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:15846349) MGI PMID:15846349 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within IGI
IMP		 (PMID:15809037) MGI PMID:15809037 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:16600992)
(PMID:15652707)
(PMID:15084464)
(PMID:12913075)		 MGI PMID:12913075 PMID:15084464 PMID:15652707 PMID:16600992 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx3 T-box 3 involved_in IGI (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tifab TRAF-interacting protein with forkhead-associated domain, family member B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,318,917...56,326,816
Ensembl chr13:56,321,517...56,326,698 		JBrowse link
G Tmie transmembrane inner ear acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:12140191) MGI
GO_Central		 PMID:12140191 GO_REF:0000033 NCBI chr 9:110,694,755...110,709,141
Ensembl chr 9:110,694,779...110,709,181 		JBrowse link
G Ush1c USH1 protein network component harmonin acts_upstream_of_or_within IMP (PMID:14519688) MGI PMID:14519688 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
G Ush1g USH1 protein network component sans acts_upstream_of_or_within IMP (PMID:12588793), (PMID:1927362) MGI PMID:1927362 PMID:12588793 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IGI (PMID:15961523) MGI PMID:15961523 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IGI (PMID:15961523) MGI PMID:15961523 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP
IDA		 (PMID:18991062) MGI PMID:18991062 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
internal genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx3-1 NK3 homeobox 1 involved_in TAS (MGI:1267297|PMID:9621431) BHF-UCL PMID:9621431 MGI:1267297 NCBI chr14:69,428,141...69,432,107
Ensembl chr14:69,428,087...69,432,111 		JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 involved_in IMP (MGI:3703484|PMID:17064680) UniProt PMID:17064680 MGI:3703484 NCBI chr 4:114,781,640...114,783,264
Ensembl chr 4:114,782,344...114,783,210 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IGI (PMID:22627278) MGI PMID:22627278 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Pax6 paired box 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within IMP
IGI		 (PMID:22627278) MGI PMID:22627278 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
kidney morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in ISO RGD
MGI		 PMID:18495111 GO_REF:0000096 MGI:4417868 RGD:6903962 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Ahr aryl-hydrocarbon receptor involved_in IMP (MGI:3760685|PMID:14644620) DFLAT PMID:14644620 MGI:3760685 NCBI chr12:35,547,978...35,584,988
Ensembl chr12:35,547,973...35,585,037 		JBrowse link
G Gcnt1 glucosaminyl (N-acetyl) transferase 1, core 2 acts_upstream_of_or_within IGI (PMID:19349303) MGI PMID:19349303 NCBI chr19:17,303,505...17,350,208
Ensembl chr19:17,303,505...17,350,208 		JBrowse link
G Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type acts_upstream_of_or_within IGI (PMID:19349303) MGI PMID:19349303 NCBI chr 9:69,938,777...69,947,172
Ensembl chr 9:69,938,778...69,945,370 		JBrowse link
G Gcnt4 glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase) acts_upstream_of_or_within IGI (PMID:19349303) MGI PMID:19349303 NCBI chr13:97,060,852...97,087,422
Ensembl chr13:97,061,197...97,087,414 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IGI (PMID:23362348) MGI PMID:23362348 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in
acts_upstream_of_or_within		 IMP
ISO		 (MGI:3807620|PMID:18371931)
(PMID:29395339)		 BHF-UCL
MGI		 PMID:18371931 PMID:29395339 GO_REF:0000119 MGI:3807620 MGI:4834177 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Prkx protein kinase, X-linked involved_in ISO (PMID:17980165) UniProt PMID:17980165 NCBI chr  X:76,804,578...76,839,545
Ensembl chr  X:76,805,017...76,839,884 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:3603061|PMID:16109771) BHF-UCL PMID:16109771 MGI:3603061 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Tshz3 teashirt zinc finger family member 3 acts_upstream_of_or_within IMP (PMID:18776146) MGI PMID:18776146 NCBI chr 7:36,397,543...36,472,978
Ensembl chr 7:36,397,543...36,472,978 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IMP (PMID:20843830) MGI PMID:20843830 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IGI (PMID:23362348) MGI PMID:23362348 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:16054034) MGI PMID:16054034 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within IMP (PMID:17636028) MGI PMID:17636028 NCBI chr 3:57,363,065...57,483,331
Ensembl chr 3:57,363,070...57,483,331 		JBrowse link
G Zmpste24 zinc metallopeptidase, STE24 acts_upstream_of_or_within IMP (PMID:11923874) MGI PMID:11923874 NCBI chr 4:120,916,434...120,955,452
Ensembl chr 4:120,916,434...120,955,438 		JBrowse link
kidney rudiment formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:16054034) MGI PMID:16054034 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
lambdoid suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:20570969) MGI PMID:20570969 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
larynx morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:28177282) MGI PMID:28177282 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IGI
IMP		 (PMID:28177282) MGI PMID:28177282 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:28177282) MGI PMID:28177282 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
lateral mesodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:11124112) MGI PMID:11124112 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IMP (PMID:28893950) MGI PMID:28893950 NCBI chr 7:105,392,101...105,393,550
Ensembl chr 7:105,388,600...105,393,568 		JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within IMP (PMID:20223754) MGI PMID:20223754 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IMP (PMID:20223754) MGI PMID:20223754 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (PMID:14676301) MGI PMID:14676301 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IDA (PMID:17898001) MGI PMID:17898001 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
left lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfc1 cryptic, EGF-CFC family member 1 acts_upstream_of_or_within IMP (PMID:10521397) MGI PMID:10521397 NCBI chr 1:34,574,729...34,583,392
Ensembl chr 1:34,574,729...34,583,394 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within IMP (PMID:11311163) MGI PMID:11311163 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:11493526) MGI PMID:11493526 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
left ventricular cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A involved_in IMP (PMID:20929948) MGI PMID:20929948 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Klk1b1 kallikrein 1-related peptidase b1 acts_upstream_of_or_within IMP (PMID:11226291) MGI PMID:11226291 NCBI chr 7:43,616,175...43,620,742
Ensembl chr 7:43,616,175...43,620,742 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:26147524) MGI PMID:26147524 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac acts_upstream_of_or_within IMP (PMID:17431507) MGI PMID:17431507 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:3689643|PMID:16151019) BHF-UCL PMID:16151019 MGI:3689643 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 involved_in IMP (MGI:3525751|PMID:15572692) UniProt PMID:15572692 MGI:3525751 NCBI chr 1:60,444,927...60,521,104
Ensembl chr 1:60,448,778...60,520,317 		JBrowse link
G Atf4 activating transcription factor 4 involved_in IMP (MGI:1339872|PMID:10096021), (MGI:1859108|PMID:10885750), (MGI:2158533|PMID:11806972) UniProt PMID:10096021 PMID:10885750 PMID:11806972 MGI:1339872 MGI:1859108 MGI:2158533 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within IMP (PMID:18056999)
(PMID:16799046)		 MGI PMID:16799046 PMID:18056999 NCBI chr17:31,896,905...31,900,704
Ensembl chr17:31,896,781...31,900,707 		JBrowse link
G Crygb crystallin, gamma B acts_upstream_of_or_within IMP (PMID:12426373), (PMID:8626090) MGI PMID:8626090 PMID:12426373 NCBI chr 1:65,119,381...65,121,449
Ensembl chr 1:65,119,378...65,121,447 		JBrowse link
G Epha2 Eph receptor A2 involved_in IDA (MGI:3831440|PMID:18948590) UniProt PMID:18948590 MGI:3831440 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:1332720|PMID:10080188) BHF-UCL PMID:10080188 MGI:1332720 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within IMP (PMID:24239381) MGI PMID:24239381 NCBI chr 2:152,135,745...152,155,914
Ensembl chr 2:152,135,748...152,155,916 		JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:9851982) MGI PMID:9851982 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Pou2f1 POU domain, class 2, transcription factor 1 acts_upstream_of_or_within IGI (PMID:17140559) MGI PMID:17140559 NCBI chr 1:165,692,719...165,830,318
Ensembl chr 1:165,692,723...165,830,247 		JBrowse link
G Six3 sine oculis-related homeobox 3 acts_upstream_of_or_within IMP (PMID:17066077) MGI PMID:17066077 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IGI (PMID:17140559) MGI PMID:17140559 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:10571739) MGI PMID:10571739 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcar3 breast cancer anti-estrogen resistance 3 acts_upstream_of_or_within IMP (PMID:19365570) MGI PMID:19365570 NCBI chr 3:122,213,406...122,323,840
Ensembl chr 3:122,087,785...122,323,840 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within IMP (PMID:18653562) MGI PMID:18653562 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within IMP (PMID:8812430)
(PMID:16799046)		 MGI PMID:8812430 PMID:16799046 NCBI chr17:31,896,905...31,900,704
Ensembl chr17:31,896,781...31,900,707 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:16102745) MGI PMID:16102745 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (PMID:11290300) MGI PMID:11290300 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412 		JBrowse link
G Lctl lactase-like involved_in IMP (MGI:6274960|PMID:29425878) UniProt PMID:29425878 MGI:6274960 NCBI chr 9:64,024,399...64,045,400
Ensembl chr 9:64,024,429...64,045,400 		JBrowse link
G Meis1 Meis homeobox 1 acts_upstream_of_or_within IMP (PMID:14713950) MGI PMID:14713950 NCBI chr11:18,830,428...18,968,992
Ensembl chr11:18,829,817...18,968,985 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:15728677) MGI PMID:15728677 NCBI chr 9:43,655,251...43,718,758
Ensembl chr 9:43,655,281...43,743,955 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within IMP (PMID:15728677) MGI PMID:15728677 NCBI chr16:46,208,028...46,318,898
Ensembl chr16:46,208,069...46,318,888 		JBrowse link
G Pitx3 paired-like homeodomain transcription factor 3 involved_in IMP (MGI:4353482|PMID:19334279) UniProt PMID:19334279 MGI:4353482 NCBI chr19:46,123,720...46,136,764
Ensembl chr19:46,124,124...46,136,765 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:1332720|PMID:10080188) BHF-UCL PMID:10080188 MGI:1332720 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Shroom2 shroom family member 2 involved_in ISS (MGI:3710716|PMID:16987870) UniProt PMID:16987870 MGI:3710716 NCBI chr  X:151,392,505...151,553,784
Ensembl chr  X:151,392,505...151,552,461 		JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:17003410) MGI PMID:17003410 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Sox1 SRY (sex determining region Y)-box 1 acts_upstream_of_or_within IMP (PMID:9512512) MGI PMID:9512512 NCBI chr 8:12,445,519...12,449,555
Ensembl chr 8:12,445,295...12,450,126 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Tdrd7 tudor domain containing 7 involved_in IMP
IBA
ISO		 (MGI:4943339|PMID:21436445) UniProt
GO_Central
MGI		 PMID:21436445 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:4943339 NCBI chr 4:45,965,335...46,034,766
Ensembl chr 4:45,965,334...46,034,761 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:18224708), (PMID:9918694) MGI PMID:9918694 PMID:18224708 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IMP (PMID:15569927) MGI PMID:15569927 NCBI chr10:116,905,324...116,986,311
Ensembl chr10:116,905,332...116,984,439 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEP (MGI:3836138|PMID:11850194) BHF-UCL PMID:11850194 MGI:3836138 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
liver morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 acts_upstream_of_or_within IMP (PMID:17339333) MGI PMID:17339333 NCBI chr 1:80,242,640...80,318,426
Ensembl chr 1:80,242,640...80,318,197 		JBrowse link
G Lipa lysosomal acid lipase A acts_upstream_of_or_within IMP (PMID:24370824) MGI PMID:24370824 NCBI chr19:34,469,716...34,504,874
Ensembl chr19:34,469,718...34,504,874 		JBrowse link
G Notch2 notch 2 acts_upstream_of_or_within IMP (PMID:25446530) MGI PMID:25446530 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within IMP (PMID:21803851) MGI PMID:21803851 NCBI chr 3:133,169,438...133,250,882
Ensembl chr 3:133,169,440...133,250,900 		JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:19686689)
(PMID:19805295)		 MGI PMID:19686689 PMID:19805295 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of_or_within IGI (PMID:19686689) MGI PMID:19686689 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
G Wnt2b wingless-type MMTV integration site family, member 2B acts_upstream_of_or_within IGI (PMID:19686689) MGI PMID:19686689 NCBI chr 3:104,852,121...104,869,025
Ensembl chr 3:104,852,588...104,869,237 		JBrowse link
lung lobe formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 acts_upstream_of_or_within IMP (PMID:17142311) MGI PMID:17142311 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
lung lobe morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16989802) MGI PMID:16989802 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:11493558) MGI PMID:11493558 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within IMP (PMID:21377456) MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within IMP
IGI		 (PMID:16691571) MGI PMID:16691571 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Lif leukemia inhibitory factor acts_upstream_of_or_within IGI (PMID:16691571) MGI PMID:16691571 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:9731532) MGI PMID:9731532 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:18990706) MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor-related protein complex 3, beta 1 subunit acts_upstream_of_or_within IGI (PMID:12777251) MGI PMID:12777251 NCBI chr13:94,492,332...94,702,838
Ensembl chr13:94,495,468...94,702,825 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:8674409) MGI PMID:8674409 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:31837950) MGI PMID:31837950 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:16937369) MGI PMID:16937369 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15800000) MGI PMID:15800000 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IMP (PMID:10411502) MGI PMID:10411502 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within IMP (PMID:16214823) MGI PMID:16214823 NCBI chr12:57,585,750...57,594,815
Ensembl chr12:57,587,414...57,593,702 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:11493558) MGI PMID:11493558 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Gata4 GATA binding protein 4 involved_in TAS (MGI:3769320|PMID:17643447) BHF-UCL PMID:17643447 MGI:3769320 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within IGI (PMID:31582725) MGI PMID:31582725 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within IGI (PMID:31582725) MGI PMID:31582725 NCBI chr17:27,774,798...27,782,649
Ensembl chr17:27,775,471...27,782,648 		JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within IGI (PMID:12777251) MGI PMID:12777251 NCBI chr19:42,743,629...42,770,013
Ensembl chr19:42,743,544...42,768,417 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within IMP (PMID:17717145) MGI PMID:17717145 NCBI chr 2:152,578,171...152,579,330
Ensembl chr 2:152,578,171...152,579,330 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 acts_upstream_of_or_within IMP (PMID:18324732) MGI PMID:18324732 NCBI chr17:25,116,480...25,155,951
Ensembl chr17:25,111,127...25,155,942 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:16712836) MGI PMID:16712836 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within IMP (PMID:16467571) MGI PMID:16467571 NCBI chr 5:137,015,873...137,025,500
Ensembl chr 5:137,015,873...137,025,502 		JBrowse link
G Rpl13a ribosomal protein L13A acts_upstream_of_or_within IMP (PMID:23460747) MGI PMID:23460747 NCBI chr 7:44,774,987...44,778,169
Ensembl chr 7:44,774,982...44,778,185 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:10500184) MGI PMID:10500184 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 acts_upstream_of_or_within IDA (PMID:11287183) MGI PMID:11287183 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:24218621) MGI PMID:24218621 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within IMP (PMID:23293024) MGI PMID:23293024 NCBI chr 4:125,997,738...126,034,822
Ensembl chr 4:125,997,750...126,034,822 		JBrowse link
G Tcf21 transcription factor 21 acts_upstream_of_or_within IMP (PMID:10572052) MGI PMID:10572052 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:18990706) MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:18367557) MGI PMID:18367557 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
male genitalia morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (PMID:19282366) MGI PMID:19282366 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:12004962) MGI PMID:12004962 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Klhl10 kelch-like 10 acts_upstream_of_or_within IMP (PMID:15136734) MGI PMID:15136734 NCBI chr11:100,331,954...100,347,853
Ensembl chr11:100,332,743...100,347,848 		JBrowse link
G Shh sonic hedgehog involved_in ISO RGD
MGI		 PMID:12533405 GO_REF:0000096 MGI:4417868 RGD:2306308 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sycp2 synaptonemal complex protein 2 acts_upstream_of_or_within IMP (PMID:16717126) MGI PMID:16717126 NCBI chr 2:177,987,088...178,051,580
Ensembl chr 2:177,987,086...178,049,478 		JBrowse link
mammary duct terminal end bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl11 C-C motif chemokine ligand 11 acts_upstream_of_or_within IMP (PMID:10804170) MGI PMID:10804170 NCBI chr11:81,948,658...81,953,781
Ensembl chr11:81,948,649...81,953,781 		JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) acts_upstream_of_or_within IMP (PMID:10804170) MGI PMID:10804170 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785 		JBrowse link
G Kdm5b lysine demethylase 5B acts_upstream_of_or_within IMP (PMID:24802759) MGI PMID:24802759 NCBI chr 1:134,487,916...134,560,621
Ensembl chr 1:134,487,909...134,563,023 		JBrowse link
G Mst1 macrophage stimulating 1 (hepatocyte growth factor-like) acts_upstream_of_or_within IMP (PMID:25049204) MGI PMID:25049204 NCBI chr 9:107,957,607...107,962,226
Ensembl chr 9:107,957,635...107,962,202 		JBrowse link
G Robo1 roundabout guidance receptor 1 acts_upstream_of_or_within IMP (PMID:16439476) MGI PMID:16439476 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Slc12a2 solute carrier family 12, member 2 acts_upstream_of_or_within IMP (PMID:12040017) MGI PMID:12040017 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within IMP (PMID:16439476) MGI PMID:16439476 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csmd1 CUB and Sushi multiple domains 1 acts_upstream_of_or_within IMP (PMID:31604923) MGI PMID:31604923 NCBI chr 8:15,942,538...17,586,908
Ensembl chr 8:15,942,537...17,585,602 		JBrowse link
G Esr1 estrogen receptor 1 (alpha) acts_upstream_of_or_within IMP (PMID:10919287) MGI PMID:10919287 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:15647257) MGI PMID:15647257 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor acts_upstream_of_or_within IMP (PMID:15178742) MGI PMID:15178742 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin acts_upstream_of_or_within IMP (PMID:10331984), (PMID:17369357) MGI PMID:10331984 PMID:17369357 NCBI chr 5:91,287,458...91,296,291
Ensembl chr 5:91,287,458...91,296,291 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:15647257) MGI PMID:15647257 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within IMP (PMID:11015591) MGI PMID:11015591 NCBI chr 2:165,834,557...165,915,162
Ensembl chr 2:165,834,556...165,915,162 		JBrowse link
G Phb2 prohibitin 2 acts_upstream_of_or_within IMP (PMID:17065319) MGI PMID:17065319 NCBI chr 6:124,689,252...124,693,908
Ensembl chr 6:124,689,299...124,693,913 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IMP (PMID:18614704) MGI PMID:18614704 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IDA (PMID:17898001) MGI PMID:17898001 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
mammary gland bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like peptide acts_upstream_of_or_within IMP (PMID:9477327) MGI PMID:9477327 NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681 		JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:11782400) MGI PMID:11782400 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:11782400) MGI PMID:11782400 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
mammary gland bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sostdc1 sclerostin domain containing 1 acts_upstream_of_or_within IMP (PMID:22509524) MGI PMID:22509524 NCBI chr12:36,364,168...36,368,451
Ensembl chr12:36,364,138...36,368,451 		JBrowse link
mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:11783999) MGI PMID:11783999 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 acts_upstream_of_or_within IGI (PMID:19503830) MGI PMID:19503830 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19503830) MGI PMID:19503830 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 acts_upstream_of_or_within IMP (PMID:12198239) MGI PMID:12198239 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474 		JBrowse link
G Ntn1 netrin 1 acts_upstream_of_or_within IGI (PMID:16439476) MGI PMID:16439476 NCBI chr11:68,100,190...68,277,652
Ensembl chr11:68,100,190...68,291,649 		JBrowse link
G Perp PERP, TP53 apoptosis effector involved_in IMP (MGI:6765017|PMID:22515648) UniProt PMID:22515648 MGI:6765017 NCBI chr10:18,720,819...18,732,821
Ensembl chr10:18,720,768...18,732,821 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within IMP (PMID:10529434) MGI PMID:10529434 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Scrib scribbled planar cell polarity involved_in IMP (MGI:4359580|PMID:19041750) UniProt PMID:19041750 MGI:4359580 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within IMP
IGI		 (PMID:16439476) MGI PMID:16439476 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
mammary gland formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:17071745) MGI PMID:17071745 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase, liver ISO RGD PMID:20110414 RGD:4142798 NCBI chr10:24,791,105...24,803,368
Ensembl chr10:24,791,119...24,803,382 		JBrowse link
G Bsx brain specific homeobox acts_upstream_of_or_within IMP (PMID:17485440) MGI PMID:17485440 NCBI chr 9:40,782,994...40,790,258
Ensembl chr 9:40,785,423...40,791,353 		JBrowse link
G Capn1 calpain 1 acts_upstream_of_or_within IMP (PMID:22555453) MGI PMID:22555453 NCBI chr19:6,038,573...6,065,855
Ensembl chr19:6,038,573...6,065,927 		JBrowse link
G Cav1 caveolin 1, caveolae protein acts_upstream_of_or_within IMP (PMID:12388746) MGI PMID:12388746 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 ISO RGD PMID:20110414 RGD:4142798 NCBI chr11:81,926,403...81,928,278
Ensembl chr11:81,926,397...81,928,279 		JBrowse link
G Cp ceruloplasmin ISO RGD PMID:28089327 RGD:25671605 NCBI chr 3:20,011,097...20,063,914
Ensembl chr 3:20,011,218...20,063,309 		JBrowse link
G Elf3 E74-like factor 3 involved_in IDA (MGI:3715065|PMID:9806763) UniProt PMID:9806763 MGI:3715065 NCBI chr 1:135,181,312...135,186,210
Ensembl chr 1:135,181,313...135,186,306 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:10653587 RGD:2290014 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:10653587 RGD:2290014 NCBI chr10:128,403,392...128,425,504
Ensembl chr10:128,403,392...128,425,521 		JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 acts_upstream_of_or_within IMP (PMID:17255210) MGI PMID:17255210 NCBI chr 1:72,897,224...72,914,024
Ensembl chr 1:72,897,091...72,914,043 		JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 acts_upstream_of_or_within
involved_in		 IC
IDA		 (MGI:5543358|PMID:22555453)
(PMID:22555453)		 GOC
MGI		 PMID:22555453 MGI:5543358 NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308 		JBrowse link
G Sfrp4 secreted frizzled-related protein 4 ISO RGD PMID:9409757 RGD:4107723 NCBI chr13:19,807,345...19,816,995
Ensembl chr13:19,807,274...19,817,164 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A involved_in ISO RGD
MGI		 PMID:16227201 GO_REF:0000096 MGI:4417868 RGD:2291942 NCBI chr11:100,750,177...100,775,995
Ensembl chr11:100,750,177...100,775,995 		JBrowse link
mammary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rln1 relaxin 1 involved_in IMP (MGI:1327714|PMID:9886856) CACAO PMID:9886856 MGI:1327714 NCBI chr19:29,309,155...29,312,070
Ensembl chr19:29,308,570...29,312,070 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within IMP (PMID:22588720) MGI PMID:22588720 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:15781643) MGI PMID:15781643 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Zfp157 zinc finger protein 157 acts_upstream_of_or_within IMP (PMID:22588720) MGI PMID:22588720 NCBI chr 5:138,439,721...138,459,162
Ensembl chr 5:138,439,730...138,458,956 		JBrowse link
mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI (PMID:16720875) MGI PMID:16720875 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:16720875) MGI PMID:16720875 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within IMP (PMID:16720875) MGI PMID:16720875 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771 		JBrowse link
mammary placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:19503830) MGI PMID:19503830 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Nrg3 neuregulin 3 acts_upstream_of_or_within IMP (PMID:10723730) MGI PMID:10723730 NCBI chr14:38,086,093...39,195,045
Ensembl chr14:38,090,909...39,195,045 		JBrowse link
G Tbx2 T-box 2 acts_upstream_of_or_within IGI (PMID:16222716) MGI PMID:16222716 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IDA
IGI		 (PMID:17071745)
(PMID:16222716)		 MGI PMID:16222716 PMID:17071745 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
membranous septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:3039210|PMID:15070745), (MGI:3814273|PMID:18924235) BHF-UCL PMID:15070745 PMID:18924235 MGI:3039210 MGI:3814273 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16687131) MGI PMID:16687131 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IMP (MGI:4946551|PMID:21330551) BHF-UCL PMID:21330551 MGI:4946551 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within IMP (PMID:19483677) MGI PMID:19483677 NCBI chr 5:33,974,286...34,055,310
Ensembl chr 5:33,978,069...34,055,319 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347) BHF-UCL PMID:11390347 MGI:3609313 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:4821522|PMID:20652948) BHF-UCL PMID:20652948 MGI:4821522 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of IMP (PMID:9056639) MGI PMID:9056639 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IMP (PMID:24550112) MGI PMID:24550112 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 sine oculis-related homeobox 2 involved_in IDA
IMP		 (MGI:5442222|PMID:22902740), (MGI:5563874|PMID:24598167)
(MGI:3844906|PMID:18682239), (MGI:4950307|PMID:21350016)		 UniProt PMID:18682239 PMID:21350016 PMID:22902740 PMID:24598167 MGI:3844906 MGI:4950307 MGI:5442222 MGI:5563874 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:21350016) MGI PMID:21350016 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell line derived neurotrophic factor involved_in ISO
IEP		 (MGI:1335967|PMID:10322633) MGI
UniProt		 PMID:10322633 GO_REF:0000096 MGI:1335967 MGI:4417868 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IDA (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Pax2 paired box 2 involved_in IEP (MGI:1335967|PMID:10322633) UniProt PMID:10322633 MGI:1335967 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:8861958) UniProt PMID:8861958 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in
acts_upstream_of		 IMP (MGI:2149437|PMID:11688560)
(PMID:24550112)		 UniProt
MGI		 PMID:11688560 PMID:24550112 MGI:2149437 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Six2 sine oculis-related homeobox 2 involved_in IEP (MGI:1335967|PMID:10322633) UniProt PMID:10322633 MGI:1335967 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
mesenchyme migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:17261592) MGI PMID:17261592 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:20040500) MGI PMID:20040500 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Mir216a microRNA 216a involved_in IMP (PMID:31367007) MGI PMID:31367007 NCBI chr11:28,707,012...28,707,083
Ensembl chr11:28,707,012...28,707,083 		JBrowse link
G Mir216b microRNA 216b involved_in IMP (PMID:31367007) MGI PMID:31367007 NCBI chr11:28,696,191...28,696,276
Ensembl chr11:28,696,191...28,696,276 		JBrowse link
G Mir217 microRNA 217 involved_in IMP (PMID:31367007) MGI PMID:31367007 NCBI chr11:28,713,728...28,713,835
Ensembl chr11:28,713,728...28,713,835 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:16054034) MGI PMID:16054034 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 acts_upstream_of_or_within IMP (PMID:11180950) MGI PMID:11180950 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 involved_in ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) UniProt PMID:1337742 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133 		JBrowse link
G Wt1 WT1 transcription factor involved_in IEP (MGI:3806730|PMID:18618131) UniProt PMID:18618131 MGI:3806730 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP (PMID:19830824) MGI PMID:19830824 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of_or_within IGI (PMID:21212101) MGI PMID:21212101 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IGI (PMID:21212101) MGI PMID:21212101 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEP (MGI:3056024|PMID:15465493) UniProt PMID:15465493 MGI:3056024 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IEP (MGI:3056024|PMID:15465493) UniProt PMID:15465493 MGI:3056024 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IMP (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602 		JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calb1 calbindin 1 involved_in IEP (MGI:3806730|PMID:18618131) UniProt PMID:18618131 MGI:3806730 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO (PMID:9530170) BHF-UCL PMID:9530170 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
metanephric renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 involved_in IEP (MGI:5050079|PMID:7909549) UniProt PMID:7909549 MGI:5050079 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 involved_in IEP (MGI:5050079|PMID:7909549) UniProt PMID:7909549 MGI:5050079 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:1337742) UniProt PMID:1337742 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Wt1 WT1 transcription factor involved_in IMP
ISO
IEP		 (MGI:1333093|PMID:10101119)
(MGI:3806730|PMID:18618131)		 UniProt
MGI		 PMID:10101119 PMID:18618131 GO_REF:0000119 MGI:1333093 MGI:3806730 MGI:4834177 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:19060336) MGI PMID:19060336 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:11062007) MGI PMID:11062007 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 acts_upstream_of_or_within IMP (PMID:23469164) MGI PMID:23469164 NCBI chr 5:96,518,622...96,932,592
Ensembl chr 5:96,521,814...96,932,587 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:19060336) MGI PMID:19060336 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
midbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within IMP (PMID:9030684) MGI PMID:9030684 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882 		JBrowse link
middle ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 acts_upstream_of_or_within IMP (PMID:8152482) MGI PMID:8152482 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
G Ednra endothelin receptor type A involved_in IMP (PMID:19185569) MGI PMID:19185569 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:27959908) MGI PMID:27959908 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10471511) MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Eya4 EYA transcriptional coactivator and phosphatase 4 acts_upstream_of_or_within IMP (PMID:18219393) MGI PMID:18219393 NCBI chr10:22,978,861...23,226,785
Ensembl chr10:22,978,862...23,226,684 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:15630379) MGI PMID:15630379 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP (PMID:17525797) MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Gsc goosecoid homeobox involved_in IMP (MGI:3035838|PMID:14973294) UniProt PMID:14973294 MGI:3035838 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP
IGI		 (PMID:16221728)
(PMID:15634706)
(PMID:15861402)		 MGI PMID:15634706 PMID:15861402 PMID:16221728 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 5:28,276,410...28,283,660
Ensembl chr 5:28,276,361...28,283,660 		JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within IGI (PMID:16955138) MGI PMID:16955138 NCBI chr 1:121,232,082...121,260,391
Ensembl chr 1:121,232,082...121,260,318 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within IMP (PMID:16330189) MGI PMID:16330189 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Myc myelocytomatosis oncogene acts_upstream_of_or_within IMP (PMID:17523175) MGI PMID:17523175 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:17712420) MGI PMID:17712420 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within IMP (PMID:14973294) MGI PMID:14973294 NCBI chr 5:41,918,826...41,921,563
Ensembl chr 5:41,918,826...41,921,844 		JBrowse link
G Nog noggin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator acts_upstream_of_or_within IMP (PMID:16571658) MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:7758948)
(PMID:9729491)		 MGI PMID:7758948 PMID:9729491 NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279 		JBrowse link
G Prrx2 paired related homeobox 2 acts_upstream_of_or_within IGI (PMID:9729491) MGI PMID:9729491 NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263 		JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within IMP (PMID:21062742) MGI PMID:21062742 NCBI chr11:114,558,644...114,563,159
Ensembl chr11:114,559,350...114,563,157 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12874121) MGI PMID:12874121 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six2 sine oculis-related homeobox 2 acts_upstream_of_or_within IGI (PMID:15634706) MGI PMID:15634706 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:20501333)
(PMID:16600992)
(PMID:15652707)		 MGI PMID:15652707 PMID:16600992 PMID:20501333 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tshz1 teashirt zinc finger family member 1 acts_upstream_of_or_within IMP (PMID:17586487) MGI PMID:17586487 NCBI chr18:84,029,752...84,105,833
Ensembl chr18:84,029,752...84,105,831 		JBrowse link
muscle organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr10:67,928,353...68,114,596
Ensembl chr10:67,928,350...68,114,570 		JBrowse link
G Cntf ciliary neurotrophic factor acts_upstream_of_or_within IGI (PMID:15716414) MGI PMID:15716414 NCBI chr19:12,740,892...12,742,996
Ensembl chr19:12,741,024...12,742,996 		JBrowse link
G Gmppa GDP-mannose pyrophosphorylase A acts_upstream_of_or_within IMP (PMID:33755596) MGI PMID:33755596 NCBI chr 1:75,412,555...75,419,823
Ensembl chr 1:75,412,574...75,419,823 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within IMP (PMID:7555718) MGI PMID:7555718 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Lif leukemia inhibitory factor acts_upstream_of_or_within IMP (PMID:15716414) MGI PMID:15716414 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IGI (PMID:19531352) MGI PMID:19531352 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Serp1 stress-associated endoplasmic reticulum protein 1 acts_upstream_of_or_within IMP (PMID:16415102) MGI PMID:16415102 NCBI chr 3:58,429,390...58,433,305
Ensembl chr 3:58,427,238...58,433,313 		JBrowse link
G Smtnl1 smoothelin-like 1 acts_upstream_of_or_within IMP (PMID:18310078) MGI PMID:18310078 NCBI chr 2:84,641,494...84,657,173
Ensembl chr 2:84,641,520...84,652,996 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IGI (PMID:19531352) MGI PMID:19531352 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within IMP (PMID:8955271) MGI PMID:8955271 NCBI chr 2:151,984,973...151,991,017
Ensembl chr 2:151,985,481...151,991,017 		JBrowse link
muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 acts_upstream_of_or_within IMP (PMID:20826656) MGI PMID:20826656 NCBI chr10:77,126,561...77,254,125
Ensembl chr10:77,126,560...77,254,104 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IGI
IMP		 (PMID:19531352) MGI PMID:19531352 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within IMP (PMID:19531352) MGI PMID:19531352 NCBI chr10:107,328,709...107,330,584
Ensembl chr10:107,328,714...107,330,598 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within IGI (PMID:19531352) MGI PMID:19531352 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in IMP (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:19531352) MGI PMID:19531352 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
muscular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 NOT|involved_in IMP (MGI:3814273|PMID:18924235) BHF-UCL PMID:18924235 MGI:3814273 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IMP (MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:2663364 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
negative regulation of apoptotic process involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc1 forkhead box C1 acts_upstream_of_or_within IGI (PMID:16839542) MGI PMID:16839542 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IGI (PMID:16839542) MGI PMID:16839542 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
negative regulation of bone trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chad chondroadherin acts_upstream_of_or_within IMP (PMID:23755099) MGI PMID:23755099 NCBI chr11:94,455,873...94,459,953
Ensembl chr11:94,455,873...94,459,953 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO RGD
MGI		 PMID:32231239 GO_REF:0000096 MGI:4417868 RGD:32716373 NCBI chr10:126,884,115...126,891,897
Ensembl chr10:126,884,119...126,888,875 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor involved_in ISO RGD
MGI		 PMID:32231239 GO_REF:0000096 MGI:4417868 RGD:32716373 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IDA
IGI
ISO		 (MGI:3525902|PMID:15634693)
(PMID:21281623)		 UniProt
MGI		 PMID:15634693 PMID:21281623 GO_REF:0000119 MGI:3525902 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IDA (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 6:67,511,043...67,512,806
Ensembl chr 6:67,511,046...67,512,780 		JBrowse link
negative regulation of cardiac chamber formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box 2 involved_in IMP (MGI:3039059|PMID:15042700) BHF-UCL PMID:15042700 MGI:3039059 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
negative regulation of cardiac epithelial to mesenchymal transition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir19a microRNA 19a acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr14:115,281,432...115,281,513
Ensembl chr14:115,281,432...115,281,513 		JBrowse link
G Mir19b-1 microRNA 19b-1 acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr14:115,281,737...115,281,823
Ensembl chr14:115,281,737...115,281,823 		JBrowse link
G Mir19b-2 microRNA 19b-2 acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:51,830,860...51,830,943
Ensembl chr  X:51,830,860...51,830,943 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
negative regulation of cell proliferation involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx3 T-box 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
negative regulation of cell proliferation involved in heart valve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IMP (MGI:3851675|PMID:19409885) BHF-UCL PMID:19409885 MGI:3851675 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Notch1 notch 1 involved_in IMP
IDA		 (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
negative regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfib nuclear factor I/B involved_in IMP (MGI:5049839|PMID:21513708) UniProt PMID:21513708 MGI:5049839 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IMP (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IMP (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
negative regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:26972716) MGI PMID:26972716 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box 2 involved_in IMP (MGI:3039059|PMID:15042700) BHF-UCL PMID:15042700 MGI:3039059 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin dependent kinase inhibitor 2A involved_in ISO RGD
MGI		 PMID:24190239 GO_REF:0000096 MGI:4417868 RGD:11252157 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP
ISO		 (MGI:3057041|PMID:15467833) UniProt
MGI		 PMID:15467833 GO_REF:0000096 MGI:3057041 MGI:4417868 NCBI chr 7:25,161,127...25,177,072
Ensembl chr 7:25,161,132...25,177,028 		JBrowse link
G Ceacam2 CEA cell adhesion molecule 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:25,215,467...25,239,429
Ensembl chr 7:25,215,467...25,239,282 		JBrowse link
G Cpb2 carboxypeptidase B2 involved_in ISO RGD
MGI		 PMID:19386599 GO_REF:0000096 MGI:4417868 RGD:7243112 NCBI chr14:75,479,727...75,520,995
Ensembl chr14:75,479,727...75,520,995 		JBrowse link
G Lims1 LIM and senescent cell antigen-like domains 1 acts_upstream_of_or_within IGI (PMID:24058607) MGI PMID:24058607 NCBI chr10:58,159,164...58,260,513
Ensembl chr10:58,159,288...58,260,513 		JBrowse link
G Lims2 LIM and senescent cell antigen like domains 2 acts_upstream_of_or_within IGI (PMID:24058607) MGI PMID:24058607 NCBI chr18:32,055,346...32,091,673
Ensembl chr18:32,055,343...32,091,672 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISO RGD
MGI		 PMID:22994359 GO_REF:0000096 MGI:4417868 RGD:150521663 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:20040500) MGI PMID:20040500 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:9056639) MGI PMID:9056639 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr  X:101,290,984...101,295,787
Ensembl chr  X:101,290,987...101,295,787 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IDA (PMID:17537789) MGI PMID:17537789 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IMP (PMID:24550112) MGI PMID:24550112 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
negative regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:4441249|PMID:18593560) BHF-UCL PMID:18593560 MGI:4441249 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IGI (PMID:17462603) MGI PMID:17462603 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
negative regulation of metanephric comma-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
negative regulation of odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator acts_upstream_of_or_within IMP (PMID:17002498) MGI PMID:17002498 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
negative regulation of odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rspo2 R-spondin 2 acts_upstream_of_or_within IMP (PMID:24616052) MGI PMID:24616052 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Tnfrsf11b tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) acts_upstream_of_or_within ISO
IDA		 (PMID:14981127) RGD
MGI		 PMID:14981127 PMID:16283633 RGD:1624174 NCBI chr15:54,114,014...54,141,700
Ensembl chr15:54,114,015...54,141,880 		JBrowse link
negative regulation of planar cell polarity pathway involved in cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
negative regulation of planar cell polarity pathway involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
negative regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
IDA		 (PMID:11401393)
(PMID:18393306)		 MGI PMID:11401393 PMID:18393306 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IDA (PMID:16324690) MGI PMID:16324690 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Sulf1 sulfatase 1 involved_in IDA (MGI:4941125|PMID:20410206) UniProt PMID:20410206 MGI:4941125 NCBI chr 1:12,762,421...12,946,090
Ensembl chr 1:12,762,501...12,931,416 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:18804104) MGI PMID:18804104 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
negative regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:10321489) MGI PMID:10321489 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of_or_within IMP (PMID:15363390) MGI PMID:15363390 NCBI chr 2:180,416,174...180,418,693
Ensembl chr 2:180,416,174...180,418,693 		JBrowse link
G Tmem215 transmembrane protein 215 acts_upstream_of_or_within IMP (PMID:30370660) MGI PMID:30370660 NCBI chr 4:40,472,180...40,475,653
Ensembl chr 4:40,472,180...40,477,168 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 acts_upstream_of_or_within IMP (PMID:25654255) MGI PMID:25654255 NCBI chr 4:148,888,823...149,039,350
Ensembl chr 4:148,888,886...149,039,346 		JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspn asporin involved_in IDA (MGI:3722035|PMID:17522060) UniProt PMID:17522060 MGI:3722035 NCBI chr13:49,697,919...49,721,041
Ensembl chr13:49,697,919...49,721,041 		JBrowse link
G Bcor BCL6 interacting corepressor involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chr  X:11,902,976...12,026,769
Ensembl chr  X:11,902,979...12,026,594 		JBrowse link
nephrogenic mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:3623046|PMID:15342483) UniProt PMID:15342483 MGI:3623046 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 sine oculis-related homeobox 2 involved_in IMP (MGI:3691408|PMID:17036046) UniProt PMID:17036046 MGI:3691408 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:17537789) MGI PMID:17537789 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Wnt6 wingless-type MMTV integration site family, member 6 acts_upstream_of_or_within IDA (PMID:11948913) MGI PMID:11948913 NCBI chr 1:74,793,499...74,824,481
Ensembl chr 1:74,811,051...74,824,481 		JBrowse link
nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:19543268) MGI PMID:19543268 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
neural crest cell migration involved in heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in IMP (MGI:3721767|PMID:17286298) BHF-UCL PMID:17286298 MGI:3721767 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
nipple morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxfp1 relaxin/insulin-like family peptide receptor 1 acts_upstream_of_or_within IMP (PMID:14701741)
(PMID:15256493)		 MGI PMID:14701741 PMID:15256493 NCBI chr 3:79,548,910...79,645,258
Ensembl chr 3:79,548,918...79,645,187 		JBrowse link
nipple sheath formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like peptide acts_upstream_of_or_within IMP (PMID:9477327) MGI PMID:9477327 NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681 		JBrowse link
nose morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ski ski sarcoma viral oncogene homolog (avian) acts_upstream_of_or_within IMP (PMID:11731796) MGI PMID:11731796 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049 		JBrowse link
G Stra6 stimulated by retinoic acid gene 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:57,971,076...58,061,287
Ensembl chr 9:57,971,071...58,061,279 		JBrowse link
Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:19620969) MGI PMID:19620969 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
notochord formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb2 crumbs family member 2 involved_in IMP (MGI:5296388|PMID:22072575) UniProt PMID:22072575 MGI:5296388 NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115 		JBrowse link
G Efna1 ephrin A1 acts_upstream_of_or_within IGI (PMID:11287184) MGI PMID:11287184 NCBI chr 3:89,179,037...89,188,258
Ensembl chr 3:89,179,040...89,188,449 		JBrowse link
G Epha2 Eph receptor A2 acts_upstream_of_or_within IMP
IGI		 (PMID:11287184) MGI PMID:11287184 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
G T brachyury, T-box transcription factor T acts_upstream_of_or_within IMP (PMID:7589801) MGI PMID:7589801 NCBI chr17:8,653,255...8,661,328
Ensembl chr17:8,653,255...8,661,328 		JBrowse link
G T2 brachyury 2 acts_upstream_of_or_within IMP (PMID:7589801) MGI PMID:7589801 NCBI chr17:8,574,590...8,661,323
Ensembl chr17:8,574,824...8,642,345 		JBrowse link
notochord morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha2 Eph receptor A2 acts_upstream_of_or_within IMP (PMID:11287184) MGI PMID:11287184 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A acts_upstream_of_or_within IMP (PMID:22949634) MGI PMID:22949634 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within IMP (PMID:16831833) MGI PMID:16831833 NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:16916379) MGI PMID:16916379 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Ppp1r35 protein phosphatase 1, regulatory subunit 35 involved_in IMP (MGI:6442352|PMID:32628936) UniProt PMID:32628936 MGI:6442352 NCBI chr 5:137,777,138...137,778,372
Ensembl chr 5:137,777,111...137,778,372 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within IGI (PMID:25813538) MGI PMID:25813538 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:25813538) MGI PMID:25813538 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
notochord regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IGI (PMID:10725236) MGI PMID:10725236 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp4 acid phosphatase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:43,901,427...43,910,814
Ensembl chr 7:43,901,572...43,906,802 		JBrowse link
G Apc APC, WNT signaling pathway regulator acts_upstream_of IMP (PMID:17002498) MGI PMID:17002498 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Aqp1 aquaporin 1 involved_in ISO (PMID:12522663) UniProt PMID:12522663 NCBI chr 6:55,313,284...55,325,540
Ensembl chr 6:55,313,417...55,325,540 		JBrowse link
G Aqp3 aquaporin 3 involved_in ISO (PMID:12522663) UniProt PMID:12522663 NCBI chr 4:41,092,724...41,098,183
Ensembl chr 4:41,092,722...41,098,183 		JBrowse link
G Aqp5 aquaporin 5 involved_in ISO (PMID:12522663) UniProt PMID:12522663 NCBI chr15:99,488,909...99,492,710
Ensembl chr15:99,488,663...99,492,710 		JBrowse link
G Aqp6 aquaporin 6 involved_in ISO (PMID:12522663) UniProt PMID:12522663 NCBI chr15:99,495,891...99,503,359
Ensembl chr15:99,499,281...99,503,358 		JBrowse link
G Axin2 axin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Bcor BCL6 interacting corepressor involved_in ISO (PMID:17517692) UniProt PMID:17517692 NCBI chr  X:11,902,976...12,026,769
Ensembl chr  X:11,902,979...12,026,594 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:25027178) MGI PMID:25027178 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:29533727) MGI PMID:29533727 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:17394220) UniProt PMID:17394220 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:17951031) MGI PMID:17951031 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Gas1 growth arrest specific 1 involved_in IMP (MGI:3838072|PMID:19211681) UniProt PMID:19211681 MGI:3838072 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Id3 inhibitor of DNA binding 3 involved_in IEP (MGI:73693|PMID:7655079) UniProt PMID:7655079 MGI:73693 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:30683845) MGI PMID:30683845 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Inhba inhibin beta-A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:16,178,841...16,206,194
Ensembl chr13:16,186,436...16,206,206 		JBrowse link
G Lamb1 laminin B1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643 		JBrowse link
G Mir875 microRNA 875 involved_in IDA (PMID:32188878) MGI PMID:32188878 NCBI chr15:35,661,116...35,661,193
Ensembl chr15:35,661,116...35,661,193 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:4418636|PMID:11023873)
(PMID:20123092)		 UniProt
MGI		 PMID:11023873 PMID:20123092 MGI:4418636 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IMP (PMID:10742104) MGI PMID:10742104 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Muc19 mucin 19 acts_upstream_of_or_within IMP (PMID:25512380) MGI PMID:25512380 NCBI chr15:91,722,531...91,832,440
Ensembl chr15:91,722,531...91,832,447 		JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within IDA (PMID:14730011) MGI PMID:14730011 NCBI chr 9:74,975,183...75,130,970
Ensembl chr 9:74,978,297...75,130,970 		JBrowse link
G Odam odontogenic, ameloblast asssociated involved_in ISO PMID:25911094 UniProt PMID:25911094 RGD:10400875 NCBI chr 5:88,032,869...88,042,668
Ensembl chr 5:88,032,888...88,042,033 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IGI (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Osr2 odd-skipped related 2 involved_in IMP (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chr15:35,296,244...35,303,451
Ensembl chr15:35,296,244...35,303,451 		JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within IGI (PMID:20123092) MGI PMID:20123092 NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607 		JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked acts_upstream_of_or_within IMP (PMID:23174213) MGI PMID:23174213 NCBI chr  X:155,945,071...156,198,282
Ensembl chr  X:155,945,071...156,198,308 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:10499586)
(PMID:10498698)		 MGI PMID:10498698 PMID:10499586 GO_REF:0000119 MGI:4834177 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Rhoa ras homolog family member A involved_in IEP (MGI:5688793|PMID:25911094) UniProt PMID:25911094 MGI:5688793 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10781055) MGI PMID:10781055 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sp6 trans-acting transcription factor 6 involved_in IMP (MGI:6305509|PMID:30504223) UniProt PMID:30504223 MGI:6305509 NCBI chr11:96,904,395...96,915,565
Ensembl chr11:96,904,220...96,915,560 		JBrowse link
G Src Rous sarcoma oncogene acts_upstream_of_or_within IMP (PMID:23174213) MGI PMID:23174213 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782 		JBrowse link
G Ssu2 ssu-2 homolog involved_in IMP
ISO		 (MGI:5887163|PMID:27680507) UniProt
MGI		 PMID:27680507 GO_REF:0000119 MGI:4834177 MGI:5887163 NCBI chr 6:112,336,283...112,365,160
Ensembl chr 6:112,336,285...112,364,984 		JBrowse link
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 acts_upstream_of_or_within IMP (PMID:22245629) MGI PMID:22245629 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133 		JBrowse link
G Tmt1a thiol methyltransferase 1A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:100,201,969...100,227,882
Ensembl chr15:100,202,021...100,226,543 		JBrowse link
G Tmt1a2 thiol methyltransferase 1A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:100,251,081...100,259,700
Ensembl chr15:100,251,081...100,259,721 		JBrowse link
G Tmt1a3 thiol methyltransferase 1A3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:100,232,687...100,246,267
Ensembl chr15:100,232,810...100,238,256 		JBrowse link
G Wnt10a wingless-type MMTV integration site family, member 10A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:74,831,178...74,843,335
Ensembl chr 1:74,830,675...74,843,338 		JBrowse link
G Zfp422 zinc finger protein 422 involved_in NAS (MGI:2449683|PMID:12489153) UniProt PMID:12489153 MGI:2449683 NCBI chr 6:116,600,977...116,605,960
Ensembl chr 6:116,600,977...116,605,960 		JBrowse link
odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin receptor IIA acts_upstream_of_or_within IGI (PMID:16330774) MGI PMID:16330774 NCBI chr 2:48,704,121...48,793,276
Ensembl chr 2:48,704,121...48,793,281 		JBrowse link
G Acvr2b activin receptor IIB acts_upstream_of_or_within IMP
IGI		 (PMID:16330774)
(PMID:11714685)		 MGI PMID:11714685 PMID:16330774 NCBI chr 9:119,231,081...119,271,214
Ensembl chr 9:119,231,184...119,264,061 		JBrowse link
G Adm adrenomedullin ISO RGD PMID:19828015 RGD:2325629 NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027 		JBrowse link
G Ambn ameloblastin involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:88,603,850...88,616,390
Ensembl chr 5:88,603,850...88,616,390 		JBrowse link
G Amelx amelogenin, X-linked involved_in IEP (MGI:3828400|PMID:16674683) BHF-UCL PMID:16674683 MGI:3828400 NCBI chr  X:167,959,110...167,970,205
Ensembl chr  X:167,959,110...167,970,196 		JBrowse link
G Amtn amelotin involved_in IEP
IBA		 (MGI:3617591|PMID:16304441) HGNC-UCL
GO_Central		 PMID:16304441 GO_REF:0000033 MGI:3617591 NCBI chr 5:88,523,967...88,533,775
Ensembl chr 5:88,523,967...88,533,775 		JBrowse link
G Ankrd11 ankyrin repeat domain 11 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 8:123,610,060...123,769,023
Ensembl chr 8:123,610,561...123,769,016 		JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (PMID:15967824) MGI PMID:15967824 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B acts_upstream_of_or_within IMP (PMID:19251658) MGI PMID:19251658 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within IGI (PMID:15967824) MGI PMID:15967824 NCBI chr 2:127,967,958...128,004,467
Ensembl chr 2:127,967,958...128,004,467 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IDA (PMID:15525533) MGI PMID:15525533 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI
IDA		 (PMID:16179481)
(PMID:15525533), (PMID:16179481)		 MGI PMID:15525533 PMID:16179481 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IDA (PMID:15525533) MGI PMID:15525533 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:15716346) MGI PMID:15716346 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bsg basigin ISO RGD PMID:17684756 RGD:2289060 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803 		JBrowse link
G Car2 carbonic anhydrase 2 ISO RGD PMID:8766158 RGD:1600721 NCBI chr 3:14,951,329...14,965,830
Ensembl chr 3:14,951,333...14,965,830 		JBrowse link
G Ccdc154 coiled-coil domain containing 154 acts_upstream_of_or_within IMP (PMID:20121924) MGI PMID:20121924 NCBI chr17:25,381,142...25,390,887
Ensembl chr17:25,381,435...25,390,887 		JBrowse link
G Chuk conserved helix-loop-helix ubiquitous kinase acts_upstream_of_or_within IMP (PMID:14960276) MGI PMID:14960276 NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919 		JBrowse link
G Ctnna1 catenin alpha 1 ISO RGD PMID:10681393 RGD:2289810 NCBI chr18:35,251,955...35,387,829
Ensembl chr18:35,251,912...35,387,832 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IMP		 (PMID:15866165) RGD
MGI		 PMID:10681393 PMID:15866165 RGD:2289810 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in NAS (MGI:1327472|PMID:9882480) UniProt PMID:9882480 MGI:1327472 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within IGI (PMID:9187081) MGI PMID:9187081 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within IGI (PMID:9187081) MGI PMID:9187081 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098 		JBrowse link
G Dlx3 distal-less homeobox 3 acts_upstream_of_or_within IMP (PMID:22351765) MGI PMID:22351765 NCBI chr11:95,010,943...95,016,122
Ensembl chr11:95,010,945...95,016,122 		JBrowse link
G Dspp dentin sialophosphoprotein ISO RGD PMID:15533758 RGD:1599800 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Eda ectodysplasin-A involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:10610025), (PMID:5893447) MGI PMID:5893447 PMID:10610025 GO_REF:0000119 MGI:4834177 NCBI chr  X:99,019,212...99,444,366
Ensembl chr  X:99,019,212...99,444,368 		JBrowse link
G Edar ectodysplasin-A receptor acts_upstream_of_or_within IMP (PMID:544312) MGI PMID:544312 NCBI chr10:58,436,602...58,511,518
Ensembl chr10:58,436,611...58,511,476 		JBrowse link
G Edaradd EDAR associated via death domain acts_upstream_of_or_within IMP (PMID:14699584), (PMID:5893447) MGI PMID:5893447 PMID:14699584 NCBI chr13:12,486,090...12,535,413
Ensembl chr13:12,487,513...12,535,319 		JBrowse link
G Enam enamelin acts_upstream_of_or_within IMP (PMID:15271968) MGI PMID:15271968 NCBI chr 5:88,635,834...88,653,908
Ensembl chr 5:88,635,834...88,653,908 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:11062007), (PMID:11880361) MGI PMID:11062007 PMID:11880361 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within IDA (PMID:12502739) MGI PMID:12502739 NCBI chr 7:144,415,123...144,418,982
Ensembl chr 7:144,401,104...144,418,980 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxi3 forkhead box I3 involved_in ISO (PMID:28710361) UniProt PMID:28710361 NCBI chr 6:70,933,590...70,938,050
Ensembl chr 6:70,933,515...70,938,050 		JBrowse link
G Fst follistatin acts_upstream_of_or_within IMP (PMID:15305290), (PMID:15525533) MGI PMID:15305290 PMID:15525533 NCBI chr13:114,588,798...114,595,522
Ensembl chr13:114,588,826...114,595,487 		JBrowse link
G Gata6 GATA binding protein 6 ISO RGD PMID:17923110 RGD:2314196 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP
IGI		 (PMID:9655803) MGI PMID:9655803 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IGI (PMID:9655803) MGI PMID:9655803 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gnao1 guanine nucleotide binding protein, alpha O ISO RGD PMID:28706494 RGD:13513970 NCBI chr 8:94,537,213...94,696,016
Ensembl chr 8:94,536,594...94,696,016 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within IGI (PMID:17764670) MGI PMID:17764670 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within IGI (PMID:17764670) MGI PMID:17764670 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in IGI (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Itga6 integrin alpha 6 acts_upstream_of_or_within IMP (PMID:16365040) MGI PMID:16365040 NCBI chr 2:71,617,236...71,688,761
Ensembl chr 2:71,575,960...71,688,760 		JBrowse link
G Jag2 jagged 2 acts_upstream_of_or_within IMP (PMID:15721140) MGI PMID:15721140 NCBI chr12:112,871,439...112,893,437
Ensembl chr12:112,871,439...112,893,396 		JBrowse link
G Lama5 laminin, alpha 5 acts_upstream_of_or_within IMP (PMID:16365040) MGI PMID:16365040 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IMP
IGI		 (PMID:12502739), (PMID:15649466)
(PMID:17699607)		 MGI PMID:12502739 PMID:15649466 PMID:17699607 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Lhx8 LIM homeobox protein 8 acts_upstream_of_or_within IMP (PMID:12703558) MGI PMID:12703558 NCBI chr 3:154,011,925...154,036,190
Ensembl chr 3:154,011,931...154,036,296 		JBrowse link
G Lrp4 low density lipoprotein receptor-related protein 4 acts_upstream_of_or_within IMP (PMID:17119023) MGI PMID:17119023 NCBI chr 2:91,287,794...91,344,246
Ensembl chr 2:91,287,856...91,344,124 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:5893447), (PMID:591875) MGI PMID:591875 PMID:5893447 MGI:61211 MGI:61254 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Msx1 msh homeobox 1 involved_in IMP
ISO		 (MGI:3688967|PMID:11369996) BHF-UCL
MGI		 PMID:11369996 GO_REF:0000119 MGI:3688967 MGI:4834177 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Nf2 neurofibromin 2 acts_upstream_of_or_within IMP (PMID:10887156) MGI PMID:10887156 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536 		JBrowse link
G Nfic nuclear factor I/C acts_upstream_of_or_within IMP (PMID:12529411) MGI PMID:12529411 NCBI chr10:81,232,025...81,267,753
Ensembl chr10:81,232,020...81,291,469 		JBrowse link
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) acts_upstream_of IMP (PMID:9268129) MGI PMID:9268129 NCBI chr11:95,459,644...95,478,524
Ensembl chr11:95,459,644...95,478,561 		JBrowse link
G Nkx2-3 NK2 homeobox 3 acts_upstream_of_or_within IMP (PMID:12141427) MGI PMID:12141427 NCBI chr19:43,600,764...43,604,331
Ensembl chr19:43,600,764...43,604,331 		JBrowse link
G Odam odontogenic, ameloblast asssociated involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:88,032,869...88,042,668
Ensembl chr 5:88,032,888...88,042,033 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide acts_upstream_of_or_within IMP (PMID:15543606) MGI PMID:15543606 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 ISO RGD PMID:16416307 RGD:2289007 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Rogdi rogdi homolog involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:4,826,593...4,831,438
Ensembl chr16:4,826,594...4,831,417 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (PMID:15136142)
(PMID:15668330)		 MGI PMID:15136142 PMID:15668330 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Scn10a sodium channel, voltage-gated, type X, alpha ISO RGD PMID:21640979 RGD:6484223 NCBI chr 9:119,437,522...119,548,388
Ensembl chr 9:119,437,522...119,548,388 		JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha ISO RGD PMID:21640979 RGD:6484223 NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:11044393) MGI PMID:11044393 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:12403705)
(PMID:17199044)		 MGI PMID:12403705 PMID:17199044 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of_or_within IMP
IGI		 (PMID:16179481) MGI PMID:16179481 NCBI chr12:36,364,168...36,368,451
Ensembl chr12:36,364,138...36,368,451 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:19233155), (PMID:20816801) MGI PMID:19233155 PMID:20816801 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IGI (PMID:17699607) MGI PMID:17699607 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO RGD PMID:29175126 RGD:14995479 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tnc tenascin C ISO RGD PMID:12971948 RGD:4889616 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252 		JBrowse link
G Traf6 TNF receptor-associated factor 6 acts_upstream_of_or_within IMP (PMID:14699584) MGI PMID:14699584 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:16410075)
(PMID:16524929)		 MGI PMID:16410075 PMID:16524929 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Wnt6 wingless-type MMTV integration site family, member 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:74,793,499...74,824,481
Ensembl chr 1:74,811,051...74,824,481 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:10781055) MGI PMID:10781055 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within IMP (PMID:23129809) MGI PMID:23129809 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 acts_upstream_of_or_within IGI (PMID:16611695) MGI PMID:16611695 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 acts_upstream_of_or_within IGI (PMID:16611695) MGI PMID:16611695 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six3 sine oculis-related homeobox 3 involved_in IDA (MGI:2136715|PMID:11458394) UniProt PMID:11458394 MGI:2136715 NCBI chr17:85,921,036...85,933,619
Ensembl chr17:85,921,036...85,936,730 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in IMP (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
organ induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:9806931) MGI PMID:9806931 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgf1 fibroblast growth factor 1 acts_upstream_of_or_within IDA (PMID:15576401) MGI PMID:15576401 NCBI chr18:38,971,725...39,062,532
Ensembl chr18:38,971,726...39,062,525 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI
ISO		 (PMID:12810586) MGI PMID:12810586 GO_REF:0000008 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within IDA (PMID:15576401) MGI PMID:15576401 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within IGI (PMID:15741321)
(PMID:12810586)		 MGI PMID:12810586 PMID:15741321 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:15741321) MGI PMID:15741321 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:15576401) MGI PMID:15576401 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within IMP (PMID:15576401) MGI PMID:15576401 NCBI chr13:55,300,631...55,316,572
Ensembl chr13:55,300,453...55,316,572 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IMP (PMID:15569927) MGI PMID:15569927 NCBI chr10:116,905,324...116,986,311
Ensembl chr10:116,905,332...116,984,439 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor acts_upstream_of_or_within IGI (PMID:15691764) MGI PMID:15691764 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within IGI (PMID:12050119) MGI PMID:12050119 NCBI chr 6:52,219,086...52,222,784
Ensembl chr 6:52,219,086...52,222,790 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within IGI (PMID:12050119) MGI PMID:12050119 NCBI chr15:102,862,961...102,865,136
Ensembl chr15:102,862,862...102,866,143 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within IGI (PMID:12050119) MGI PMID:12050119 NCBI chr 2:74,509,902...74,517,360
Ensembl chr 2:74,509,901...74,517,360 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12783782) MGI PMID:12783782 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within IMP (PMID:15691764) MGI PMID:15691764 NCBI chr 3:37,694,096...37,698,748
Ensembl chr 3:37,694,096...37,698,747 		JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within IMP (PMID:20223754) MGI PMID:20223754 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IMP (PMID:20223754) MGI PMID:20223754 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 TAS
IGI		 (MGI:5424107|PMID:22235191)
(PMID:14623822)		 ParkinsonsUK-UCL
MGI		 PMID:14623822 PMID:22235191 MGI:5424107 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf3 fibroblast growth factor 3 involved_in
acts_upstream_of_or_within		 TAS
IGI		 (MGI:5424107|PMID:22235191)
(PMID:17601531)		 ParkinsonsUK-UCL
MGI		 PMID:17601531 PMID:22235191 MGI:5424107 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 TAS
IGI		 (MGI:5424107|PMID:22235191)
(PMID:17601531)		 ParkinsonsUK-UCL
MGI		 PMID:17601531 PMID:22235191 MGI:5424107 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 TAS
IMP		 (MGI:5424107|PMID:22235191)
(PMID:9435295)		 ParkinsonsUK-UCL
MGI		 PMID:9435295 PMID:22235191 MGI:5424107 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (PMID:9620767) MGI PMID:9620767 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:18377888) MGI PMID:18377888 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tcap titin-cap involved_in IEP (MGI:1314551|PMID:9817758) BHF-UCL PMID:9817758 MGI:1314551 NCBI chr11:98,274,637...98,275,779
Ensembl chr11:98,274,637...98,275,779 		JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:16916509) MGI PMID:16916509 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:17074316) MGI PMID:17074316 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
otolith morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted acts_upstream_of_or_within IMP (PMID:5367369) MGI PMID:5367369 NCBI chr13:38,786,674...38,821,093
Ensembl chr13:38,776,818...38,819,085 		JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 acts_upstream_of_or_within IGI (PMID:24086156) MGI PMID:24086156 NCBI chr 6:94,581,510...94,677,205
Ensembl chr 6:94,581,510...94,677,139 		JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:24086156) GO_Central
MGI		 PMID:24086156 GO_REF:0000033 NCBI chr10:125,802,088...125,851,228
Ensembl chr10:125,802,037...125,851,228 		JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:12,716,168...12,872,461
Ensembl chr18:12,732,953...12,871,920 		JBrowse link
outer ear morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10471511) MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:15630379) MGI PMID:15630379 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Gas1 growth arrest specific 1 acts_upstream_of_or_within IMP (PMID:17525797) MGI PMID:17525797 NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IGI (PMID:18952847) MGI PMID:18952847 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IGI (PMID:18952847) MGI PMID:18952847 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator acts_upstream_of_or_within IMP (PMID:16571658) MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (PMID:16600992) MGI PMID:16600992 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Zic3 zinc finger protein of the cerebellum 3 involved_in IMP (PMID:17127413) MGI PMID:17127413 NCBI chr  X:57,075,988...57,081,990
Ensembl chr  X:57,068,060...57,087,096 		JBrowse link
outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 acts_upstream_of_or_within IMP (PMID:17767158) MGI PMID:17767158 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IGI (MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:4939577 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IMP (MGI:3851675|PMID:19409885) BHF-UCL PMID:19409885 MGI:3851675 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in
acts_upstream_of_or_within		 IMP (MGI:3054669|PMID:15475956)
(PMID:11694877)		 BHF-UCL
MGI		 PMID:11694877 PMID:15475956 MGI:3054669 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like acts_upstream_of_or_within IMP (PMID:25658046) MGI PMID:25658046 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP (MGI:2446944|PMID:12464179) BHF-UCL PMID:12464179 MGI:2446944 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within IMP (PMID:24005908) MGI PMID:24005908 NCBI chr 4:144,618,712...144,654,214
Ensembl chr 4:144,619,397...144,654,779 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IGI (MGI:5439040|PMID:22841628) BHF-UCL PMID:22841628 MGI:5439040 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IMP
IGI		 (MGI:2446944|PMID:12464179)
(MGI:5439040|PMID:22841628)		 BHF-UCL PMID:12464179 PMID:22841628 MGI:2446944 MGI:5439040 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Eln elastin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:134,731,449...134,776,300
Ensembl chr 5:134,731,447...134,776,177 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:21364285) MGI PMID:21364285 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:21364285) MGI PMID:21364285 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Gata4 GATA binding protein 4 involved_in TAS (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IMP (MGI:4413411|PMID:19008477) BHF-UCL PMID:19008477 MGI:4413411 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IMP (MGI:4453944|PMID:20122914)
(PMID:19609448)		 BHF-UCL
MGI		 PMID:19609448 PMID:20122914 MGI:4453944 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668 		JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit acts_upstream_of_or_within IMP (PMID:9436976) MGI PMID:9436976 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G Ilk integrin linked kinase involved_in IMP (MGI:5619428|PMID:24131868) CACAO PMID:24131868 MGI:5619428 NCBI chr 7:105,385,797...105,392,132
Ensembl chr 7:105,385,799...105,392,132 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Jun jun proto-oncogene acts_upstream_of_or_within IMP (PMID:10352021) MGI PMID:10352021 NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within IGI (PMID:19035347) MGI PMID:19035347 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:17601530) MGI PMID:17601530 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4 acts_upstream_of_or_within IMP
IGI		 (PMID:20026598) MGI PMID:20026598 NCBI chr 9:72,569,613...72,657,133
Ensembl chr 9:72,569,628...72,657,134 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP
IGI		 (PMID:16510504)
(PMID:19035347)		 MGI PMID:16510504 PMID:19035347 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Notch1 notch 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Npy1r neuropeptide Y receptor Y1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:67,149,595...67,159,452
Ensembl chr 8:67,149,844...67,159,444 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391 		JBrowse link
G Npy5r neuropeptide Y receptor Y5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:67,132,617...67,140,746
Ensembl chr 8:67,132,617...67,140,780 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 involved_in IMP (MGI:2446944|PMID:12464179) BHF-UCL PMID:12464179 MGI:2446944 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Plxnd1 plexin D1 involved_in
acts_upstream_of_or_within		 TAS
IMP		 (MGI:5693177|PMID:26053665)
(PMID:23918385)		 BHF-UCL
MGI		 PMID:23918385 PMID:26053665 MGI:5693177 NCBI chr 6:115,931,772...115,972,300
Ensembl chr 6:115,931,772...115,971,966 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:25190059)
(PMID:26883626)		 MGI PMID:25190059 PMID:26883626 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:3027664|PMID:14701881) BHF-UCL PMID:14701881 MGI:3027664 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle involved_in IMP (MGI:3764002|PMID:18003898) UniProt PMID:18003898 MGI:3764002 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP (PMID:20215345) MGI PMID:20215345 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C involved_in IEP (MGI:4355631|PMID:19666519) BHF-UCL PMID:19666519 MGI:4355631 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:21364285) MGI PMID:21364285 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:23319608) MGI PMID:23319608 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 involved_in IGI (MGI:3716256|PMID:17610846) BHF-UCL PMID:17610846 MGI:3716256 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP
IGI		 (PMID:18583714)
(PMID:21364285)
(PMID:17916582)		 MGI PMID:17916582 PMID:18583714 PMID:21364285 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3039059|PMID:15042700), (MGI:3487212|PMID:15459098), (MGI:5300829|PMID:22186728) UniProt PMID:15042700 PMID:15459098 PMID:22186728 MGI:3039059 MGI:3487212 MGI:5300829 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx20 T-box 20 involved_in IMP (MGI:3604925|PMID:15843409) BHF-UCL PMID:15843409 MGI:3604925 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:18723448) MGI PMID:18723448 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:11744375) MGI PMID:11744375 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in TAS
IMP		 (MGI:4943617|PMID:20299672)
(MGI:5300829|PMID:22186728)		 DFLAT
UniProt		 PMID:20299672 PMID:22186728 MGI:4943617 MGI:5300829 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IMP (MGI:3818140|PMID:17704211) BHF-UCL PMID:17704211 MGI:3818140 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
G Thbs1 thrombospondin 1 acts_upstream_of_or_within IGI (PMID:20026598) MGI PMID:20026598 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IMP (MGI:4461879|PMID:18093989) BHF-UCL PMID:18093989 MGI:4461879 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within IMP (PMID:17767158) MGI PMID:17767158 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in IMP (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in TAS (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr15:40,518,438...40,967,988
Ensembl chr15:40,518,431...40,967,988 		JBrowse link
outflow tract septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 NOT|involved_in IMP (MGI:3610266|PMID:16140292) BHF-UCL PMID:16140292 MGI:3610266 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:3039210|PMID:15070745), (MGI:3814273|PMID:18924235) BHF-UCL PMID:15070745 PMID:18924235 MGI:3039210 MGI:3814273 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in
NOT|involved_in		 IMP (MGI:2429424|PMID:12441304)
(MGI:3851675|PMID:19409885)		 BHF-UCL PMID:12441304 PMID:19409885 MGI:2429424 MGI:3851675 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within IMP (PMID:19008950) MGI PMID:19008950 NCBI chr16:20,335,694...20,352,763
Ensembl chr16:20,335,732...20,352,760 		JBrowse link
G Eng endoglin involved_in IGI (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in IGI (MGI:5285152|PMID:20807544) UniProt PMID:20807544 MGI:5285152 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16687131) MGI PMID:16687131 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Gata6 GATA binding protein 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Lrp2 low density lipoprotein receptor-related protein 2 involved_in IMP (MGI:5770180|PMID:26822476) UniProt PMID:26822476 MGI:5770180 NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within IGI (PMID:17601530) MGI PMID:17601530 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nrp1 neuropilin 1 involved_in IMP (MGI:5693177|PMID:26053665) BHF-UCL PMID:26053665 MGI:5693177 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844 		JBrowse link
G Nrp2 neuropilin 2 involved_in IGI (MGI:5693177|PMID:26053665) BHF-UCL PMID:26053665 MGI:5693177 NCBI chr 1:62,742,476...62,857,851
Ensembl chr 1:62,742,444...62,857,854 		JBrowse link
G Parva parvin, alpha involved_in IMP (MGI:4368016|PMID:19798050) UniProt PMID:19798050 MGI:4368016 NCBI chr 7:112,027,102...112,190,899
Ensembl chr 7:112,026,712...112,190,899 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IGI (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in IGI (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,208,713 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C involved_in IGI
IMP		 (MGI:5693177|PMID:26053665) BHF-UCL PMID:26053665 MGI:5693177 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
G Smad4 SMAD family member 4 involved_in IGI (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Smad6 SMAD family member 6 involved_in IMP (MGI:1352979|PMID:10655064) BHF-UCL PMID:10655064 MGI:1352979 NCBI chr 9:63,860,358...63,929,374
Ensembl chr 9:63,860,358...63,929,341 		JBrowse link
G Tbx1 T-box 1 involved_in IMP (MGI:5285152|PMID:20807544) UniProt PMID:20807544 MGI:5285152 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx2 T-box 2 involved_in IMP (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chr11:85,723,441...85,732,774
Ensembl chr11:85,723,377...85,732,774 		JBrowse link
G Tbx20 T-box 20 involved_in IMP
ISO		 (MGI:3604925|PMID:15843409) BHF-UCL
MGI		 PMID:15843409 GO_REF:0000119 MGI:3604925 MGI:4834177 NCBI chr 9:24,632,108...24,685,580
Ensembl chr 9:24,629,434...24,685,599 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347), (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 PMID:11390347 MGI:3609313 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:4821522|PMID:20652948) BHF-UCL PMID:20652948 MGI:4821522 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:40,518,438...40,967,988
Ensembl chr15:40,518,431...40,967,988 		JBrowse link
pancreas morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin-like elastase family, member 1 acts_upstream_of_or_within IMP (PMID:17222338) MGI PMID:17222338 NCBI chr15:100,572,303...100,585,801
Ensembl chr15:100,572,302...100,585,802 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 acts_upstream_of_or_within IMP (PMID:25063451) MGI PMID:25063451 NCBI chr 1:136,770,300...136,888,186
Ensembl chr 1:136,770,309...136,888,186 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (PMID:20185815) MGI PMID:20185815 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
paraxial mesoderm formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exoc4 exocyst complex component 4 acts_upstream_of_or_within IMP (PMID:9441674) MGI PMID:9441674 NCBI chr 6:33,226,025...33,950,914
Ensembl chr 6:33,226,020...33,950,914 		JBrowse link
G Foxc1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:3047050|PMID:15196959)
(PMID:11562355)		 UniProt
MGI		 PMID:11562355 PMID:15196959 MGI:3047050 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IGI (PMID:11562355) MGI PMID:11562355 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within IGI (PMID:10090727) MGI PMID:10090727 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within IMP (PMID:16109169) MGI PMID:16109169 NCBI chr 5:34,919,084...35,069,878
Ensembl chr 5:34,919,084...35,069,878 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IGI (PMID:10090727) MGI PMID:10090727 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within IGI (PMID:25813538) MGI PMID:25813538 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IGI (PMID:25813538) MGI PMID:25813538 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
paraxial mesoderm morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within IMP (PMID:16831833) MGI PMID:16831833 NCBI chr 2:80,330,856...80,411,526
Ensembl chr 2:80,330,856...80,411,724 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within IMP (PMID:15084457) MGI PMID:15084457 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IMP (PMID:15084457) MGI PMID:15084457 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
paraxial mesoderm structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (PMID:16943278) MGI PMID:16943278 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
paraxial mesodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:9106663) MGI PMID:9106663 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IMP (PMID:9126297) MGI PMID:9126297 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
perichondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:28768899) MGI PMID:28768899 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
planar cell polarity pathway involved in cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19056682) MGI PMID:19056682 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
planar cell polarity pathway involved in cardiac right atrium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19056682) MGI PMID:19056682 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
planar cell polarity pathway involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IMP (PMID:24302887) MGI PMID:24302887 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within IGI (PMID:20704721) MGI PMID:20704721 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:16571627) MGI
GO_Central		 PMID:16571627 GO_REF:0000033 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in		 IGI
IBA
IMP		 (PMID:16571627) MGI
GO_Central		 PMID:16571627 GO_REF:0000033 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:19008950) MGI
GO_Central		 PMID:19008950 GO_REF:0000033 NCBI chr16:20,335,694...20,352,763
Ensembl chr16:20,335,732...20,352,760 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within IGI (PMID:20643356) MGI PMID:20643356 NCBI chr 4:135,269,199...135,300,943
Ensembl chr 4:135,269,199...135,300,941 		JBrowse link
G Ptk7 PTK7 protein tyrosine kinase 7 acts_upstream_of_or_within IGI (PMID:20704721) MGI PMID:20704721 NCBI chr17:46,875,377...46,940,975
Ensembl chr17:46,875,397...46,940,430 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within IGI (PMID:18257070) MGI PMID:18257070 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IGI (PMID:18257070) MGI PMID:18257070 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Sfrp5 secreted frizzled-related sequence protein 5 acts_upstream_of_or_within IGI (PMID:18257070) MGI PMID:18257070 NCBI chr19:42,186,410...42,190,691
Ensembl chr19:42,186,410...42,190,691 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IGI
IMP		 (PMID:20704721)
(PMID:20643356)
(PMID:20940229)
(PMID:16571627)
(PMID:18257070)
(PMID:19008950)		 MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19056682) MGI PMID:19056682 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
planar cell polarity pathway involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19056682) MGI PMID:19056682 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19056682) MGI PMID:19056682 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
planar cell polarity pathway involved in ventricular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IMP (PMID:19056682) MGI PMID:19056682 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within IMP (PMID:20223754) MGI PMID:20223754 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IMP (PMID:20223754) MGI PMID:20223754 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
positive regulation of apoptotic process involved in mammary gland involution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of_or_within IMP (PMID:10363969) MGI PMID:10363969 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A acts_upstream_of_or_within IMP (PMID:15105443) MGI PMID:15105443 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Pml promyelocytic leukemia involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:58,125,359...58,157,077
Ensembl chr 9:58,125,359...58,157,069 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor acts_upstream_of_or_within IMP (PMID:15178742) MGI PMID:15178742 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:4456940|PMID:17350185) UniProt PMID:17350185 MGI:4456940 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:18533146) MGI PMID:18533146 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide involved_in ISO RGD
MGI		 PMID:8879189 GO_REF:0000096 MGI:4417868 RGD:11087558 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:20,368,637...20,421,341
Ensembl chr 3:20,368,637...20,421,341 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 involved_in IMP
ISO		 (MGI:3808848|PMID:18607644) UniProt
MGI		 PMID:18607644 GO_REF:0000096 MGI:3808848 MGI:4417868 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in IMP
IBA
ISO		 (MGI:5284782|PMID:17229286) UniProt
GO_Central
MGI		 PMID:17229286 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5284782 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 IDA
IGI		 (MGI:3714585|PMID:17522159)
(PMID:17522159)
(PMID:21281623)		 UniProt
MGI		 PMID:17522159 PMID:21281623 MGI:3714585 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Hoxb7 homeobox B7 involved_in IMP (MGI:3833510|PMID:17881463) UniProt PMID:17881463 MGI:3833510 NCBI chr11:96,176,431...96,180,989
Ensembl chr11:96,177,449...96,180,988 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IMP (MGI:5006869|PMID:21523854) UniProt PMID:21523854 MGI:5006869 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:3613206|PMID:16216236) UniProt PMID:16216236 MGI:3613206 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Maged1 MAGE family member D1 involved_in IMP (MGI:3848096|PMID:19268530) UniProt PMID:19268530 MGI:3848096 NCBI chr  X:93,579,080...93,585,631
Ensembl chr  X:93,579,080...93,585,749 		JBrowse link
G Nog noggin involved_in IDA (MGI:2446986|PMID:12141440), (MGI:3714585|PMID:17522159) UniProt PMID:12141440 PMID:17522159 MGI:2446986 MGI:3714585 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188) UniProt PMID:17314325 PMID:17538188 PMID:17881463 MGI:3704067 MGI:3833510 MGI:5009394 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within IMP (PMID:24550112) MGI PMID:24550112 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:5009396|PMID:17300925)
(PMID:21281623)		 UniProt
MGI		 PMID:17300925 PMID:21281623 MGI:5009396 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 involved_in IMP (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IMP (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IDA (MGI:3611700|PMID:16291795) UniProt PMID:16291795 MGI:3611700 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Wnt2b wingless-type MMTV integration site family, member 2B acts_upstream_of_or_within IDA (PMID:11507767) MGI PMID:11507767 NCBI chr 3:104,852,121...104,869,025
Ensembl chr 3:104,852,588...104,869,237 		JBrowse link
positive regulation of cardiac epithelial to mesenchymal transition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in IMP (MGI:3610266|PMID:16140292) BHF-UCL PMID:16140292 MGI:3610266 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Emp2 epithelial membrane protein 2 involved_in IMP (MGI:6443292|PMID:30773261) UniProt PMID:30773261 MGI:6443292 NCBI chr16:10,099,613...10,131,832
Ensembl chr16:10,099,613...10,131,832 		JBrowse link
G Jag1 jagged 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Notch1 notch 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:5300829|PMID:22186728) UniProt PMID:22186728 MGI:5300829 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IGI (MGI:5502250|PMID:23863481) BHF-UCL PMID:23863481 MGI:5502250 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IGI (MGI:5502250|PMID:23863481) BHF-UCL PMID:23863481 MGI:5502250 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C involved_in IDA (MGI:5693177|PMID:26053665) BHF-UCL PMID:26053665 MGI:5693177 NCBI chr 5:17,779,814...17,935,266
Ensembl chr 5:17,779,279...17,935,266 		JBrowse link
positive regulation of cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 proviral integration site 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,709,759...29,715,085
Ensembl chr17:29,709,727...29,715,086 		JBrowse link
positive regulation of cell proliferation involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in IGI (MGI:3701380|PMID:17336907) BHF-UCL PMID:17336907 MGI:3701380 NCBI chr 6:87,405,976...87,411,494
Ensembl chr 6:87,405,976...87,414,659 		JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide involved_in IMP (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr10:127,869,144...127,884,506
Ensembl chr10:127,871,444...127,884,506 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:3701380|PMID:17336907) BHF-UCL PMID:17336907 MGI:3701380 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:17350610) MGI PMID:17350610 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
positive regulation of cell proliferation involved in heart valve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IMP (MGI:4946551|PMID:21330551) BHF-UCL PMID:21330551 MGI:4946551 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
positive regulation of dentin-containing tooth bud formation by mesenchymal-epithelial signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir875 microRNA 875 involved_in IDA (PMID:32188878) MGI PMID:32188878 NCBI chr15:35,661,116...35,661,193
Ensembl chr15:35,661,116...35,661,193 		JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amtn amelotin involved_in IMP
IBA		 (MGI:5613837|PMID:25407797) UniProt
GO_Central		 PMID:25407797 GO_REF:0000033 MGI:5613837 NCBI chr 5:88,523,967...88,533,775
Ensembl chr 5:88,523,967...88,533,775 		JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator involved_in IDA (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767 		JBrowse link
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IDA (PMID:16014627) MGI PMID:16014627 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Enam enamelin acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:24603688) MGI
GO_Central		 PMID:24603688 GO_REF:0000033 NCBI chr 5:88,635,834...88,653,908
Ensembl chr 5:88,635,834...88,653,908 		JBrowse link
G Odaph odontogenesis associated phosphoprotein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:92,135,332...92,143,176
Ensembl chr 5:92,135,334...92,143,179 		JBrowse link
G Slc4a2 solute carrier family 4 (anion exchanger), member 2 involved_in IDA (MGI:6716964|PMID:26403673) ARUK-UCL PMID:26403673 MGI:6716964 NCBI chr 5:24,628,834...24,645,945
Ensembl chr 5:24,628,835...24,645,948 		JBrowse link
positive regulation of endocardial cushion to mesenchymal transition involved in heart valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in IDA (MGI:4838344|PMID:20804746) BHF-UCL PMID:20804746 MGI:4838344 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828 		JBrowse link
positive regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in IMP (MGI:5467649|PMID:23219958) CACAO PMID:23219958 MGI:5467649 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Fgf7 fibroblast growth factor 7 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 2:125,876,578...125,933,105
Ensembl chr 2:125,876,578...125,933,105 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16989802) MGI PMID:16989802 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within IGI (PMID:17428829) MGI PMID:17428829 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within IMP (PMID:24661562) MGI PMID:24661562 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374 		JBrowse link
G Srsf6 serine and arginine-rich splicing factor 6 acts_upstream_of_or_within ISO (PMID:23132731) MGI PMID:23132731 NCBI chr 2:162,773,428...162,779,041
Ensembl chr 2:162,773,448...162,779,041 		JBrowse link
G Wnt2 wingless-type MMTV integration site family, member 2 acts_upstream_of_or_within IMP (PMID:19686689) MGI PMID:19686689 NCBI chr 6:17,988,939...18,032,771
Ensembl chr 6:17,988,939...18,030,584 		JBrowse link
positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in IMP (MGI:4368063|PMID:19703439) BHF-UCL PMID:19703439 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I involved_in IMP (MGI:3820811|PMID:18718461) BHF-UCL PMID:18718461 MGI:3820811 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO RGD
MGI		 PMID:16033771 GO_REF:0000096 MGI:4417868 RGD:11341689 NCBI chr 1:58,750,353...58,798,043
Ensembl chr 1:58,750,667...58,798,043 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:38,971,725...39,062,532
Ensembl chr18:38,971,726...39,062,525 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:33,066,970...33,097,400
Ensembl chr11:33,067,430...33,097,400 		JBrowse link
G Hpn hepsin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
G Il18 interleukin 18 involved_in ISO RGD
MGI		 PMID:24412291 GO_REF:0000096 MGI:4417868 RGD:14696652 NCBI chr 9:50,466,000...50,493,141
Ensembl chr 9:50,466,127...50,493,140 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor 1 involved_in ISO RGD
MGI		 PMID:24814243 GO_REF:0000096 MGI:4417868 RGD:13793384 NCBI chr 6:108,190,044...108,528,077
Ensembl chr 6:108,190,057...108,528,070 		JBrowse link
G Mdk midkine involved_in IMP (MGI:3606557|PMID:15482347) UniProt PMID:15482347 MGI:3606557 NCBI chr 2:91,760,149...91,762,348
Ensembl chr 2:91,760,150...91,762,642 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:17438330) MGI PMID:17438330 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Ptn pleiotrophin involved_in IMP
ISO		 (MGI:3606557|PMID:15482347) UniProt
RGD
MGI		 PMID:15482347 PMID:16226713 GO_REF:0000096 MGI:3606557 MGI:4417868 RGD:9834996 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Rtn4 reticulon 4 involved_in IMP (MGI:6282933|PMID:23299899) UniProt PMID:23299899 MGI:6282933 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO with PCB 126 or TCDD RGD
MGI		 PMID:9111198 PMID:17557910 GO_REF:0000096 MGI:4417868 RGD:14995469 RGD:14995481 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
G Tnfaip3 tumor necrosis factor, alpha-induced protein 3 involved_in IDA (MGI:4943408|PMID:15962316) BHF-UCL PMID:15962316 MGI:4943408 NCBI chr10:18,876,658...18,891,158
Ensembl chr10:18,876,658...18,891,405 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IDA (PMID:23740243) MGI PMID:23740243 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in IMP (MGI:1352298|PMID:10652269) UniProt PMID:10652269 MGI:1352298 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893 		JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell line derived neurotrophic factor involved_in IMP (MGI:81286|PMID:8657306) UniProt PMID:8657306 MGI:81286 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Lif leukemia inhibitory factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:4,207,587...4,222,514
Ensembl chr11:4,207,557...4,222,514 		JBrowse link
G Pax2 paired box 2 involved_in IGI (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IMP (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
positive regulation of mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc myelocytomatosis oncogene involved_in IMP (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wt1 WT1 transcription factor involved_in IMP (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
positive regulation of odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IDA (PMID:7848824) MGI PMID:7848824 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Cd34 CD34 antigen involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:194,621,239...194,643,587
Ensembl chr 1:194,621,127...194,643,587 		JBrowse link
G Edn1 endothelin 1 involved_in ISO RGD
MGI		 PMID:16843458 GO_REF:0000096 MGI:4417868 RGD:4892598 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
G Ednra endothelin receptor type A involved_in ISO RGD
MGI		 PMID:16843458 GO_REF:0000096 MGI:4417868 RGD:4892598 NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093 		JBrowse link
G Msx1 msh homeobox 1 involved_in IMP (MGI:65526|PMID:7914451) UniProt PMID:7914451 MGI:65526 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IDA (PMID:7848824) MGI PMID:7848824 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
positive regulation of odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf1 colony stimulating factor 1 (macrophage) acts_upstream_of_or_within IMP (PMID:12865350) MGI PMID:12865350 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785 		JBrowse link
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) acts_upstream_of_or_within IMP (PMID:9268129) MGI PMID:9268129 NCBI chr11:95,459,644...95,478,524
Ensembl chr11:95,459,644...95,478,561 		JBrowse link
G Prkcb protein kinase C, beta ISO RGD PMID:15763930 RGD:1625521 NCBI chr 7:121,888,327...122,233,625
Ensembl chr 7:121,887,974...122,233,625 		JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 involved_in IMP (MGI:5635320|PMID:25677106) UniProt PMID:25677106 MGI:5635320 NCBI chr10:62,494,822...62,561,907
Ensembl chr10:62,494,822...62,561,907 		JBrowse link
positive regulation of polarized epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in IMP (MGI:5306539|PMID:21959375) UniProt PMID:21959375 MGI:5306539 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Numb NUMB endocytic adaptor protein acts_upstream_of_or_within IMP (PMID:21385765) MGI PMID:21385765 NCBI chr12:83,840,808...83,968,708
Ensembl chr12:83,840,808...83,968,708 		JBrowse link
positive regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 involved_in ISO RGD
MGI		 PMID:12917395 GO_REF:0000096 MGI:4417868 RGD:2301324 NCBI chr 3:129,695,064...129,707,761
Ensembl chr 3:129,695,074...129,707,752 		JBrowse link
positive regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IGI (PMID:21364285) MGI PMID:21364285 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Gng5 G protein subunit gamma 5 acts_upstream_of_or_within IMP (PMID:24599258) MGI PMID:24599258 NCBI chr 3:146,205,591...146,211,298
Ensembl chr 3:146,205,562...146,211,327 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI (PMID:21364285) MGI PMID:21364285 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IDA (PMID:19745164) MGI PMID:19745164 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx5 T-box 5 acts_upstream_of_or_within IMP (PMID:22898775) MGI PMID:22898775 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Wnt6 wingless-type MMTV integration site family, member 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:74,793,499...74,824,481
Ensembl chr 1:74,811,051...74,824,481 		JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IMP (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within IGI (PMID:15955981) MGI PMID:15955981 NCBI chr17:27,238,786...27,247,601
Ensembl chr17:27,238,784...27,247,983 		JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (PMID:15955981) MGI PMID:15955981 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Flt1 FMS-like tyrosine kinase 1 acts_upstream_of_or_within IGI (PMID:22426483) MGI PMID:22426483 NCBI chr 5:147,498,414...147,663,419
Ensembl chr 5:147,498,414...147,662,821 		JBrowse link
G Hmgn1 high mobility group nucleosomal binding domain 1 acts_upstream_of_or_within IMP (PMID:16466397) MGI PMID:16466397 NCBI chr16:95,922,788...95,928,925
Ensembl chr16:95,921,818...95,928,929 		JBrowse link
G Kdr kinase insert domain protein receptor acts_upstream_of_or_within IGI (PMID:22426483) MGI PMID:22426483 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within IDA (PMID:24101522) MGI PMID:24101522 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221 		JBrowse link
post-embryonic cardiac muscle cell growth involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt6 sirtuin 6 involved_in ISO RGD
MGI		 PMID:22335191 GO_REF:0000096 MGI:4417868 RGD:9586060 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
post-embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of_or_within IMP (PMID:15363390) MGI PMID:15363390 NCBI chr 2:180,416,174...180,418,693
Ensembl chr 2:180,416,174...180,418,693 		JBrowse link
G Efemp1 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr11:28,803,154...28,876,743
Ensembl chr11:28,803,204...28,876,743 		JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913 		JBrowse link
G Mfap2 microfibrillar-associated protein 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295 		JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated involved_in
acts_upstream_of_or_within		 IMP (PMID:12915475)
(PMID:15316081), (PMID:16885194)		 MGI PMID:12915475 PMID:15316081 PMID:16885194 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838 		JBrowse link
G Dscam DS cell adhesion molecule acts_upstream_of_or_within IMP (PMID:18216855) MGI PMID:18216855 NCBI chr16:96,388,652...96,971,935
Ensembl chr16:96,392,040...96,971,952 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within IMP (PMID:10097103) MGI PMID:10097103 NCBI chr 8:13,455,081...13,471,951
Ensembl chr 8:13,455,081...13,471,951 		JBrowse link
primary heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in IMP (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within IMP (PMID:16364283) MGI PMID:16364283 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) acts_upstream_of_or_within IMP (PMID:17473173) MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
primary prostatic bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:10208740) MGI PMID:10208740 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lzts2 leucine zipper, putative tumor suppressor 2 acts_upstream_of_or_within IMP (PMID:21949185) MGI PMID:21949185 NCBI chr19:45,003,615...45,015,554
Ensembl chr19:45,002,853...45,015,550 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in IEP (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Pax8 paired box 8 involved_in IEP (MGI:2445273|PMID:12435636) UniProt PMID:12435636 MGI:2445273 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 (alpha) acts_upstream_of_or_within IMP (PMID:18535112) MGI PMID:18535112 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:17215304) MGI PMID:17215304 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within IMP (PMID:18184727) MGI PMID:18184727 NCBI chr10:116,905,324...116,986,311
Ensembl chr10:116,905,332...116,984,439 		JBrowse link
G Hoxb13 homeobox B13 acts_upstream_of_or_within IGI (PMID:12620974) MGI PMID:12620974 NCBI chr11:96,085,142...96,087,436
Ensembl chr11:96,085,142...96,088,273 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IGI (PMID:12668621) MGI PMID:12668621 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within IMP (PMID:10218945) MGI PMID:10218945 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within IMP (PMID:18371946) MGI PMID:18371946 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
prostate epithelial cord elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 (alpha) acts_upstream_of_or_within IMP (PMID:18535112) MGI PMID:18535112 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:17215304) MGI PMID:17215304 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:15013801) MGI PMID:15013801 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
prostate gland epithelium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (PMID:17652515) MGI PMID:17652515 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Cyp7b1 cytochrome P450, family 7, subfamily b, polypeptide 1 acts_upstream_of_or_within IMP (PMID:12370428) MGI PMID:12370428 NCBI chr 3:18,126,108...18,298,054
Ensembl chr 3:18,126,114...18,297,502 		JBrowse link
G Esr2 estrogen receptor 2 (beta) acts_upstream_of_or_within IMP (PMID:12370428), (PMID:15187231) MGI PMID:12370428 PMID:15187231 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within IMP (PMID:15987773) MGI PMID:15987773 NCBI chr12:57,585,750...57,594,815
Ensembl chr12:57,587,414...57,593,702 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:23786676) MGI PMID:23786676 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within IMP (PMID:17138659) MGI PMID:17138659 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Igf1r insulin-like growth factor I receptor acts_upstream_of_or_within IMP (PMID:18451178) MGI PMID:18451178 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in ISO RGD
MGI		 PMID:20108352 GO_REF:0000096 MGI:4417868 RGD:2325693 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048 		JBrowse link
G Notch1 notch 1 acts_upstream_of_or_within IMP (PMID:16360140) MGI PMID:16360140 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within IMP (PMID:8388780) MGI PMID:8388780 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952 		JBrowse link
G Stat5a signal transducer and activator of transcription 5A acts_upstream_of_or_within IMP (PMID:10908145) MGI PMID:10908145 NCBI chr11:100,750,177...100,775,995
Ensembl chr11:100,750,177...100,775,995 		JBrowse link
G Tnc tenascin C acts_upstream_of_or_within IMP (PMID:18950615) MGI PMID:18950615 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252 		JBrowse link
prostate gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:11401393), (PMID:9268572) MGI PMID:9268572 PMID:11401393 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:18184727) MGI PMID:18184727 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:23786676) MGI PMID:23786676 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Serpinb5 serine (or cysteine) peptidase inhibitor, clade B, member 5 acts_upstream_of_or_within IMP (PMID:18593913) MGI PMID:18593913 NCBI chr 1:106,788,905...106,811,078
Ensembl chr 1:106,788,903...106,811,078 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:18325490) MGI PMID:18325490 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
prostate gland stromal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crip1 cysteine-rich protein 1 involved_in ISO (PMID:9507743) UniProt PMID:9507743 NCBI chr12:113,115,632...113,117,499
Ensembl chr12:113,109,936...113,117,499 		JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within IMP (PMID:15987773) MGI PMID:15987773 NCBI chr12:57,585,750...57,594,815
Ensembl chr12:57,587,414...57,593,702 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:23786676) MGI PMID:23786676 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within IMP (PMID:17138659) MGI PMID:17138659 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of IMP (PMID:11401393) MGI PMID:11401393 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI (PMID:12941620) MGI PMID:12941620 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Gli2 GLI-Kruppel family member GLI2 acts_upstream_of_or_within IMP (PMID:16707121) MGI PMID:16707121 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349 		JBrowse link
G Nog noggin acts_upstream_of_or_within IMP (PMID:18028901) MGI PMID:18028901 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Shh sonic hedgehog NOT|acts_upstream_of_or_within IGI (PMID:15013801) MGI PMID:15013801 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:11106548) MGI PMID:11106548 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
proximal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd5 COMM domain containing 5 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:76,784,141...76,786,223
Ensembl chr15:76,784,110...76,785,505 		JBrowse link
G Ctns cystinosis, nephropathic involved_in ISO RGD
MGI		 PMID:35695380 GO_REF:0000096 MGI:4417868 RGD:155630629 NCBI chr11:73,073,959...73,089,869
Ensembl chr11:73,074,422...73,089,868 		JBrowse link
regulation of animal organ formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (MGI:3790398|PMID:17537799) UniProt PMID:17537799 MGI:3790398 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Wt1 WT1 transcription factor involved_in IMP (MGI:3790398|PMID:17537799) UniProt PMID:17537799 MGI:3790398 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
regulation of animal organ morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx1 T-box 1 acts_upstream_of_or_within IGI
IMP		 (PMID:19389367)
(PMID:17164259)		 MGI PMID:17164259 PMID:19389367 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
regulation of apoptotic process involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:3609313|PMID:11390347) BHF-UCL PMID:11390347 MGI:3609313 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:20040500) MGI PMID:20040500 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (MGI:5009396|PMID:17300925) UniProt PMID:17300925 MGI:5009396 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:24191021) MGI PMID:24191021 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 acts_upstream_of_or_within IMP (PMID:19164602) MGI PMID:19164602 NCBI chr 6:112,436,466...112,449,833
Ensembl chr 6:112,436,466...112,449,833 		JBrowse link
G Etv5 ets variant 5 acts_upstream_of_or_within IDA (PMID:12871699) MGI PMID:12871699 NCBI chr16:22,200,063...22,258,320
Ensembl chr16:22,200,059...22,258,469 		JBrowse link
G Phb2 prohibitin 2 acts_upstream_of_or_within IMP (PMID:17065319) MGI PMID:17065319 NCBI chr 6:124,689,252...124,693,908
Ensembl chr 6:124,689,299...124,693,913 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IGI (PMID:17898001) MGI PMID:17898001 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A acts_upstream_of_or_within IDA
IGI		 (PMID:17898001) MGI PMID:17898001 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
regulation of branching involved in prostate gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:15772937) MGI PMID:15772937 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:16324690) MGI PMID:16324690 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Esr1 estrogen receptor 1 (alpha) acts_upstream_of_or_within IMP (PMID:15665095), (PMID:18755802) MGI PMID:15665095 PMID:18755802 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within IMP (PMID:9097018) MGI PMID:9097018 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943 		JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within IMP (PMID:12183441) MGI PMID:12183441 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within IMP (PMID:18371946) MGI PMID:18371946 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
regulation of branching involved in salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd7 BTB domain containing 7 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:20671187) GO_Central
MGI		 PMID:20671187 GO_REF:0000033 NCBI chr12:102,747,056...102,844,733
Ensembl chr12:102,747,056...102,844,730 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within IMP (PMID:18816447) MGI PMID:18816447 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878 		JBrowse link
G Snai2 snail family zinc finger 2 acts_upstream_of_or_within IMP (PMID:20671187) MGI PMID:20671187 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IMP
IDA		 (PMID:11241200) MGI PMID:11241200 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor, alpha acts_upstream_of_or_within IMP (PMID:18559345) MGI PMID:18559345 NCBI chr 5:138,961,761...138,986,336
Ensembl chr 5:138,961,769...138,983,125 		JBrowse link
regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntn4 netrin 4 acts_upstream_of_or_within IDA (PMID:17588941) MGI PMID:17588941 NCBI chr10:93,476,911...93,581,834
Ensembl chr10:93,476,543...93,583,069 		JBrowse link
regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IDA (PMID:18559345) MGI PMID:18559345 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf7 fibroblast growth factor 7 acts_upstream_of_or_within IDA (PMID:18559345) MGI PMID:18559345 NCBI chr 2:125,876,578...125,933,105
Ensembl chr 2:125,876,578...125,933,105 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IDA (PMID:18559345) MGI PMID:18559345 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Hgf hepatocyte growth factor acts_upstream_of_or_within IMP
ISO		 (PMID:14517989) MGI PMID:14517989 GO_REF:0000008 NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150 		JBrowse link
G Met met proto-oncogene acts_upstream_of_or_within IMP (PMID:14517989) MGI PMID:14517989 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979 		JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 sine oculis-related homeobox 2 involved_in IMP (MGI:3691408|PMID:17036046) UniProt PMID:17036046 MGI:3691408 NCBI chr17:85,970,276...85,995,682
Ensembl chr17:85,991,705...85,995,702 		JBrowse link
regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin NOT|involved_in IMP (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
regulation of cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch 1 involved_in ISO RGD
MGI		 PMID:18824567 GO_REF:0000096 MGI:4417868 RGD:2325311 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
regulation of cell adhesion involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch 1 involved_in IMP (MGI:3027664|PMID:14701881) BHF-UCL PMID:14701881 MGI:3027664 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IMP (MGI:5634261|PMID:25514037) CACAO PMID:25514037 MGI:5634261 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:3027664|PMID:14701881) BHF-UCL PMID:14701881 MGI:3027664 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
regulation of cell proliferation involved in heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin NOT|involved_in IMP (MGI:3721185|PMID:17628518) BHF-UCL PMID:17628518 MGI:3721185 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
regulation of cell proliferation involved in kidney morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform involved_in IMP (MGI:3487305|PMID:15509543) UniProt PMID:15509543 MGI:3487305 NCBI chr 3:136,375,778...136,643,488
Ensembl chr 3:136,375,885...136,643,488 		JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:20102707) MGI PMID:20102707 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dmp1 dentin matrix protein 1 acts_upstream_of_or_within IDA (PMID:16014627) MGI PMID:16014627 NCBI chr 5:104,345,441...104,361,968
Ensembl chr 5:104,350,479...104,361,968 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of IMP (PMID:30243146), (PMID:31336344) MGI PMID:30243146 PMID:31336344 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
regulation of epithelial cell proliferation involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:24191021) MGI PMID:24191021 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
regulation of epithelial to mesenchymal transition involved in endocardial cushion formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 NOT|involved_in IMP (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 NOT|involved_in IMP (MGI:3830400|PMID:19161227) BHF-UCL PMID:19161227 MGI:3830400 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jhy junctional cadherin complex regulator acts_upstream_of_or_within IMP (PMID:29211732) MGI PMID:29211732 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414 		JBrowse link
G Pkhd1 polycystic kidney and hepatic disease 1 involved_in IMP (MGI:5430302|PMID:19959710) UniProt PMID:19959710 MGI:5430302 NCBI chr 1:20,128,003...20,688,306
Ensembl chr 1:20,128,003...20,688,288 		JBrowse link
G Sapcd2 suppressor APC domain containing 2 involved_in IMP (MGI:5882149|PMID:26766442) UniProt PMID:26766442 MGI:5882149 NCBI chr 2:25,261,974...25,268,225
Ensembl chr 2:25,262,333...25,268,225 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within IGI (PMID:19300477) MGI PMID:19300477 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IGI (PMID:19300477) MGI PMID:19300477 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Sfrp5 secreted frizzled-related sequence protein 5 acts_upstream_of_or_within IGI (PMID:19300477) MGI PMID:19300477 NCBI chr19:42,186,410...42,190,691
Ensembl chr19:42,186,410...42,190,691 		JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within IMP (PMID:25393619) MGI PMID:25393619 NCBI chr16:16,570,880...16,647,177
Ensembl chr16:16,570,880...16,647,320 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 acts_upstream_of_or_within IGI (PMID:19300477) MGI PMID:19300477 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within IMP (PMID:19966784) MGI PMID:19966784 NCBI chr 3:129,776,408...129,855,248
Ensembl chr 3:129,776,408...129,855,202 		JBrowse link
regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 acts_upstream_of_or_within IMP (PMID:19725955) MGI PMID:19725955 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Por cytochrome p450 oxidoreductase involved_in ISO positive regulation RGD
MGI		 PMID:19264869 GO_REF:0000096 MGI:4417868 RGD:2316785 NCBI chr 5:135,698,894...135,764,180
Ensembl chr 5:135,698,887...135,764,180 		JBrowse link
regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:152,391,475...152,403,686
Ensembl chr 4:152,391,476...152,403,450 		JBrowse link
regulation of heart morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI-Kruppel family member GLI1 acts_upstream_of_or_within IMP (PMID:23740243) MGI PMID:23740243 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Ifng interferon gamma involved_in ISO RGD
MGI		 PMID:15799032 GO_REF:0000096 MGI:4417868 RGD:8142374 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Plau plasminogen activator, urokinase involved_in ISO RGD
MGI		 PMID:17587687 GO_REF:0000096 MGI:4417868 RGD:6484147 NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453 		JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within IMP (PMID:23740243) MGI PMID:23740243 NCBI chr 2:165,915,819...165,997,603
Ensembl chr 2:165,915,009...165,997,583 		JBrowse link
regulation of kidney size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asxl1 ASXL transcriptional regulator 1 involved_in IMP (MGI:5751943|PMID:26385183) CACAO PMID:26385183 MGI:5751943 NCBI chr 2:153,187,750...153,245,927
Ensembl chr 2:153,187,749...153,245,927 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IMP (MGI:4454597|PMID:20457918) BHF-UCL PMID:20457918 MGI:4454597 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323 		JBrowse link
regulation of lateral mesodermal cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IGI (PMID:16943278) MGI PMID:16943278 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IGI (PMID:16943278) MGI PMID:16943278 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IDA
IMP		 (PMID:16054034) MGI PMID:16054034 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
regulation of metanephros size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 involved_in IMP (MGI:3808848|PMID:18607644) UniProt PMID:18607644 MGI:3808848 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Pax2 paired box 2 involved_in IMP
ISO		 (MGI:3833510|PMID:17881463) UniProt
MGI		 PMID:17881463 GO_REF:0000119 MGI:3833510 MGI:4834177 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
regulation of odontogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IMP
IGI		 (MGI:7539469|PMID:29148101)
(PMID:20123092)		 UniProt
MGI		 PMID:20123092 PMID:29148101 MGI:7539469 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927 		JBrowse link
G Pax9 paired box 9 acts_upstream_of_or_within IGI (PMID:20123092) MGI PMID:20123092 NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607 		JBrowse link
G Shh sonic hedgehog involved_in IMP (MGI:4949552|PMID:21447550) BHF-UCL PMID:21447550 MGI:4949552 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Sp6 trans-acting transcription factor 6 acts_upstream_of_or_within IMP (PMID:18156176) MGI PMID:18156176 NCBI chr11:96,904,395...96,915,565
Ensembl chr11:96,904,220...96,915,560 		JBrowse link
regulation of odontogenesis of dentin-containing tooth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcdd1 adenomatosis polyposis coli down-regulated 1 involved_in IMP (MGI:6379934|PMID:26170146) CACAO PMID:26170146 MGI:6379934 NCBI chr18:63,055,398...63,086,886
Ensembl chr18:63,055,302...63,094,250 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within IGI (PMID:9244299) MGI PMID:9244299 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IGI (PMID:9244299) MGI PMID:9244299 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IMP (PMID:20102707) MGI PMID:20102707 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211 		JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 acts_upstream_of_or_within IMP (PMID:17803355) MGI PMID:17803355 NCBI chr19:25,587,609...25,601,285
Ensembl chr19:25,587,665...25,601,285 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within IGI (PMID:9244299) MGI PMID:9244299 NCBI chr19:45,724,930...45,731,380
Ensembl chr19:45,725,237...45,731,354 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within IMP (PMID:12701101) MGI PMID:12701101 NCBI chr14:57,661,519...57,755,393
Ensembl chr14:57,661,519...57,755,393 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (PMID:14688224) MGI PMID:14688224 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Wnt10a wingless-type MMTV integration site family, member 10A acts_upstream_of_or_within IDA (PMID:17286598) MGI PMID:17286598 NCBI chr 1:74,831,178...74,843,335
Ensembl chr 1:74,830,675...74,843,338 		JBrowse link
regulation of polarized epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajap1 adherens junction associated protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:153,457,678...153,568,313
Ensembl chr 4:153,457,678...153,567,268 		JBrowse link
regulation of pronephros size term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1a HNF1 homeobox A NOT|involved_in ISO (PMID:15355349) UniProt PMID:15355349 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IGI (PMID:12941620) MGI PMID:12941620 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP
IDA		 (PMID:12221011)
(PMID:18393306)		 MGI PMID:12221011 PMID:18393306 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor acts_upstream_of_or_within IDA (PMID:11747369) MGI PMID:11747369 NCBI chr 2:109,505,045...109,557,388
Ensembl chr 2:109,505,045...109,557,352 		JBrowse link
G Cntf ciliary neurotrophic factor acts_upstream_of_or_within IDA (PMID:11747369) MGI PMID:11747369 NCBI chr19:12,740,892...12,742,996
Ensembl chr19:12,741,024...12,742,996 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within IDA (PMID:11747369) MGI PMID:11747369 NCBI chr 3:37,402,616...37,464,255
Ensembl chr 3:37,402,495...37,464,257 		JBrowse link
regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IDA (PMID:19620969) MGI PMID:19620969 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IMP (MGI:4413411|PMID:19008477) BHF-UCL PMID:19008477 MGI:4413411 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within IMP (PMID:19609448) MGI PMID:19609448 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain acts_upstream_of_or_within IMP (PMID:19620969) MGI PMID:19620969 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell line derived neurotrophic factor involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:17537789) MGI PMID:17537789 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP (PMID:16054034) MGI PMID:16054034 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
renal vesicle induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox8 SRY (sex determining region Y)-box 8 involved_in IMP (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IMP (MGI:4939090|PMID:21212101) UniProt PMID:21212101 MGI:4939090 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IDA (PMID:11507767) MGI PMID:11507767 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
renal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:5009392|PMID:17610272) UniProt PMID:17610272 MGI:5009392 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6 ADP-ribosylation factor-like 6 acts_upstream_of_or_within IMP (PMID:20333246)
(PMID:22139371)		 MGI PMID:20333246 PMID:22139371 NCBI chr16:59,433,312...59,459,772
Ensembl chr16:59,433,312...59,459,754 		JBrowse link
G Atp8a2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 involved_in IMP (MGI:5574432|PMID:24413176) UniProt PMID:24413176 MGI:5574432 NCBI chr14:59,884,980...60,324,363
Ensembl chr14:59,875,989...60,434,628 		JBrowse link
G Calb1 calbindin 1 involved_in IEP (MGI:1353814|PMID:10741426) UniProt PMID:10741426 MGI:1353814 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064 		JBrowse link
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated acts_upstream_of_or_within IMP (PMID:17234588) MGI PMID:17234588 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838 		JBrowse link
G Fat3 FAT atypical cadherin 3 acts_upstream_of_or_within IGI (PMID:21903076) MGI PMID:21903076 NCBI chr 9:15,821,485...16,413,981
Ensembl chr 9:15,821,485...16,412,581 		JBrowse link
G Fjx1 four jointed box 1 acts_upstream_of_or_within IGI (PMID:21903076) MGI PMID:21903076 NCBI chr 2:102,279,711...102,282,137
Ensembl chr 2:102,279,711...102,282,844 		JBrowse link
G Foxn4 forkhead box N4 involved_in IMP (MGI:3054139|PMID:15363391) UniProt PMID:15363391 MGI:3054139 NCBI chr 5:114,392,225...114,412,486
Ensembl chr 5:114,392,225...114,411,868 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IMP (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Irx6 Iroquois homeobox 6 acts_upstream_of_or_within IMP (PMID:23172916) MGI PMID:23172916 NCBI chr 8:93,400,917...93,407,584
Ensembl chr 8:93,400,916...93,407,584 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:16111892) MGI PMID:16111892 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP
IEP		 (MGI:3772525|PMID:18094249)
(MGI:1353814|PMID:10741426)		 UniProt PMID:10741426 PMID:18094249 MGI:1353814 MGI:3772525 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Megf11 multiple EGF-like-domains 11 involved_in IMP (MGI:5316136|PMID:22407321) UniProt PMID:22407321 MGI:5316136 NCBI chr 9:64,291,556...64,618,584
Ensembl chr 9:64,292,908...64,616,487 		JBrowse link
G Mir145a microRNA 145a ISO RGD PMID:34291866 RGD:155260301 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965 		JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:29654250) MGI PMID:29654250 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013 		JBrowse link
G Prom1 prominin 1 involved_in IMP (MGI:3838023|PMID:19228982) UniProt PMID:19228982 MGI:3838023 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374 		JBrowse link
G Ptf1a pancreas specific transcription factor, 1a involved_in IMP (MGI:3691257|PMID:17075007) UniProt PMID:17075007 MGI:3691257 NCBI chr 2:19,450,474...19,452,312
Ensembl chr 2:19,450,474...19,452,312 		JBrowse link
G Ptprm protein tyrosine phosphatase receptor type M involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:66,973,843...67,661,486
Ensembl chr17:66,973,942...67,661,452 		JBrowse link
G Rdh13 retinol dehydrogenase 13 (all-trans and 9-cis) acts_upstream_of_or_within IMP (PMID:22605914) MGI PMID:22605914 NCBI chr 7:4,428,664...4,474,279
Ensembl chr 7:4,427,769...4,448,648 		JBrowse link
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) acts_upstream_of_or_within IMP (PMID:15326152)
(PMID:11983912)		 MGI PMID:11983912 PMID:15326152 NCBI chr  X:159,548,815...159,584,800
Ensembl chr  X:159,551,009...159,582,659 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IMP (MGI:5693671|PMID:26287463) UniProt PMID:26287463 MGI:5693671 NCBI chr11:113,667,200...113,957,855
Ensembl chr11:113,667,200...113,957,872 		JBrowse link
G Slc1a1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 involved_in
acts_upstream_of_or_within		 IMP (PMID:29677370)
(PMID:19766171)		 MGI PMID:19766171 PMID:29677370 NCBI chr19:28,812,535...28,891,360
Ensembl chr19:28,812,449...28,891,360 		JBrowse link
G Tfap2a transcription factor AP-2, alpha involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800 		JBrowse link
G Tspan12 tetraspanin 12 involved_in IMP (MGI:4410396|PMID:19837033) UniProt PMID:19837033 MGI:4410396 NCBI chr 6:21,771,390...21,879,557
Ensembl chr 6:21,771,394...21,852,514 		JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:17092954) MGI PMID:17092954 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated involved_in
acts_upstream_of_or_within		 IMP (PMID:12915475)
(PMID:17234588), (PMID:25147295)		 MGI PMID:12915475 PMID:17234588 PMID:25147295 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:3848562|PMID:19389377) UniProt PMID:19389377 MGI:3848562 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 acts_upstream_of_or_within IMP (PMID:32265257) MGI PMID:32265257 NCBI chr16:56,019,447...56,094,119
Ensembl chr16:56,024,676...56,094,119 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 involved_in ISO (PMID:15346351) BHF-UCL PMID:15346351 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:18985738) MGI PMID:18985738 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Man2a1 mannosidase 2, alpha 1 acts_upstream_of_or_within IMP (PMID:20144606) MGI PMID:20144606 NCBI chr17:64,907,683...65,062,105
Ensembl chr17:64,907,731...65,062,105 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within IMP (MGI:5789479|PMID:27008858) ARUK-UCL PMID:27008858 MGI:5789479 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981 		JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IDA
IMP		 (PMID:15716406) MGI PMID:15716406 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within IMP (PMID:15728677) MGI PMID:15728677 NCBI chr16:46,208,028...46,318,898
Ensembl chr16:46,208,069...46,318,888 		JBrowse link
G Prom1 prominin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374 		JBrowse link
G Ptf1a pancreas specific transcription factor, 1a acts_upstream_of_or_within IMP (PMID:17301087) MGI PMID:17301087 NCBI chr 2:19,450,474...19,452,312
Ensembl chr 2:19,450,474...19,452,312 		JBrowse link
G Rom1 rod outer segment membrane protein 1 acts_upstream_of_or_within IMP (PMID:20300562) MGI PMID:20300562 NCBI chr19:8,904,746...8,906,720
Ensembl chr19:8,904,755...8,906,720 		JBrowse link
G Rp1 retinitis pigmentosa 1 (human) acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within IMP (PMID:10725384) MGI PMID:10725384 NCBI chr  X:10,024,455...10,083,034
Ensembl chr  X:9,939,860...10,083,159 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 acts_upstream_of_or_within IMP (PMID:16651659) MGI PMID:16651659 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Vsx2 visual system homeobox 2 acts_upstream_of_or_within IMP (PMID:16854970), (PMID:8630490) MGI PMID:8630490 PMID:16854970 NCBI chr12:84,616,602...84,642,231
Ensembl chr12:84,616,536...84,642,231 		JBrowse link
retinal bipolar neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within IMP (PMID:17092954) MGI PMID:17092954 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681 		JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within IMP (PMID:16249514) MGI PMID:16249514 NCBI chr19:4,185,422...4,189,608
Ensembl chr19:4,185,422...4,194,032 		JBrowse link
G Casz1 castor zinc finger 1 acts_upstream_of_or_within IDA (PMID:24467707) MGI PMID:24467707 NCBI chr 4:148,888,823...149,039,350
Ensembl chr 4:148,888,886...149,039,346 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within IDA (PMID:25654255) MGI PMID:25654255 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Irx5 Iroquois homeobox 5 acts_upstream_of_or_within IGI (PMID:18322081) MGI PMID:18322081 NCBI chr 8:93,084,424...93,088,084
Ensembl chr 8:93,084,253...93,102,914 		JBrowse link
G Irx6 Iroquois homeobox 6 acts_upstream_of_or_within IMP (PMID:23172916) MGI PMID:23172916 NCBI chr 8:93,400,917...93,407,584
Ensembl chr 8:93,400,916...93,407,584 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain acts_upstream_of_or_within IMP (PMID:28199486) MGI PMID:28199486 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Vsx1 visual system homeobox 1 acts_upstream_of_or_within IMP
IGI		 (PMID:15043821)
(PMID:18322081)
(PMID:14745032)		 MGI PMID:14745032 PMID:15043821 PMID:18322081 NCBI chr 2:150,522,622...150,531,057
Ensembl chr 2:150,522,622...150,531,280 		JBrowse link
G Vsx2 visual system homeobox 2 acts_upstream_of_or_within IMP (PMID:8630490) MGI PMID:8630490 NCBI chr12:84,616,602...84,642,231
Ensembl chr12:84,616,536...84,642,231 		JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 involved_in IMP (MGI:6214404|PMID:30146259) UniProt PMID:30146259 MGI:6214404 NCBI chr15:57,558,063...57,703,228
Ensembl chr15:57,558,061...57,703,228 		JBrowse link
retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2-associated X protein acts_upstream_of_or_within IMP (PMID:14517994) MGI PMID:14517994 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of IMP (PMID:10321489) MGI PMID:10321489 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of IMP (PMID:15363390) MGI PMID:15363390 NCBI chr 2:180,416,174...180,418,693
Ensembl chr 2:180,416,174...180,418,693 		JBrowse link
G Fasl Fas ligand acts_upstream_of_or_within IMP (PMID:14517994) MGI PMID:14517994 NCBI chr 1:161,608,260...161,616,064
Ensembl chr 1:161,608,258...161,616,064 		JBrowse link
G Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 acts_upstream_of_or_within IMP (PMID:12808454) MGI PMID:12808454 NCBI chr14:7,669,819...7,766,808
Ensembl chr14:7,669,823...7,767,484 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in IMP (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within IMP (PMID:16249514) MGI PMID:16249514 NCBI chr19:4,185,422...4,189,608
Ensembl chr19:4,185,422...4,194,032 		JBrowse link
G Cnga3 cyclic nucleotide gated channel alpha 3 acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr 1:37,257,317...37,302,465
Ensembl chr 1:37,253,515...37,302,465 		JBrowse link
G Crb2 crumbs family member 2 involved_in IMP (MGI:5461109|PMID:23001562) UniProt PMID:23001562 MGI:5461109 NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115 		JBrowse link
G Dio3 deiodinase, iodothyronine type III acts_upstream_of_or_within IMP (PMID:20203194) MGI PMID:20203194 NCBI chr12:110,245,664...110,247,531
Ensembl chr12:110,245,502...110,247,531 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IMP (PMID:17065522), (PMID:21052544) MGI PMID:17065522 PMID:21052544 NCBI chr 3:107,994,120...108,008,748
Ensembl chr 3:108,000,105...108,008,748 		JBrowse link
G Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr13:117,738,856...118,117,564
Ensembl chr13:117,738,856...118,123,954 		JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IGI
IMP		 (PMID:21857657) MGI PMID:21857657 NCBI chr14:64,828,106...64,828,190
Ensembl chr14:64,828,106...64,828,190 		JBrowse link
G Mir124a-2 microRNA 124a-2 acts_upstream_of_or_within IGI (PMID:21857657) MGI PMID:21857657 NCBI chr 3:17,849,826...17,849,934
Ensembl chr 3:17,849,826...17,849,934 		JBrowse link
G Mir182 microRNA 182 acts_upstream_of_or_within IGI (PMID:23341629) MGI PMID:23341629 NCBI chr 6:30,165,917...30,165,991
Ensembl chr 6:30,165,917...30,165,991 		JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within IGI (PMID:23341629) MGI PMID:23341629 NCBI chr 6:30,169,667...30,169,736
Ensembl chr 6:30,169,667...30,169,736 		JBrowse link
G Mir96 microRNA 96 acts_upstream_of_or_within IGI (PMID:23341629) MGI PMID:23341629 NCBI chr 6:30,169,445...30,169,550
Ensembl chr 6:30,169,445...30,169,550 		JBrowse link
G Pde6c phosphodiesterase 6C, cGMP specific, cone, alpha prime acts_upstream_of_or_within IMP (PMID:21052544) MGI PMID:21052544 NCBI chr19:38,121,220...38,172,391
Ensembl chr19:38,121,229...38,172,406 		JBrowse link
G Rorb RAR-related orphan receptor beta involved_in IDA (MGI:3652638|PMID:16574740) UniProt PMID:16574740 MGI:3652638 NCBI chr19:18,907,966...19,088,560
Ensembl chr19:18,907,969...19,088,560 		JBrowse link
G Rp1 retinitis pigmentosa 1 (human) involved_in IDA (MGI:2676521|PMID:14507858) UniProt PMID:14507858 MGI:2676521 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464 		JBrowse link
G Thrb thyroid hormone receptor beta acts_upstream_of IMP (PMID:20203194) MGI PMID:20203194 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
G Thy1 thymus cell antigen 1, theta involved_in IMP (MGI:1349255|PMID:10567740) UniProt PMID:10567740 MGI:1349255 NCBI chr 9:43,954,681...43,959,876
Ensembl chr 9:43,954,681...43,959,876 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927 		JBrowse link
retinal cone cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within IMP (PMID:36125046) MGI PMID:36125046 NCBI chr10:111,134,540...111,137,597
Ensembl chr10:111,134,540...111,137,588 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IMP
IGI
IDA		 (PMID:19815523) MGI PMID:19815523 NCBI chr 9:107,551,636...107,556,833
Ensembl chr 9:107,551,673...107,556,911 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IGI
IDA
IMP		 (PMID:19815523) MGI PMID:19815523 NCBI chr 3:107,994,120...108,008,748
Ensembl chr 3:108,000,105...108,008,748 		JBrowse link
G Notch1 notch 1 acts_upstream_of IMP (PMID:16452096) MGI PMID:16452096 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
retinal rod cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in IMP (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328 		JBrowse link
G Alms1 ALMS1, centrosome and basal body associated acts_upstream_of_or_within IMP (PMID:16000322) MGI PMID:16000322 NCBI chr 6:85,564,482...85,698,973
Ensembl chr 6:85,564,513...85,679,735 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:15173597) MGI PMID:15173597 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 acts_upstream_of_or_within IMP (PMID:17255172) MGI PMID:17255172 NCBI chr 2:180,416,174...180,418,693
Ensembl chr 2:180,416,174...180,418,693 		JBrowse link
G Cfh complement component factor h acts_upstream_of_or_within IMP (PMID:17921253) MGI PMID:17921253 NCBI chr 1:140,013,593...140,111,149
Ensembl chr 1:140,012,446...140,111,502 		JBrowse link
G Miat myocardial infarction associated transcript (non-protein coding) acts_upstream_of_or_within IMP (PMID:16877424) MGI PMID:16877424 NCBI chr 5:112,361,094...112,376,814
Ensembl chr 5:112,361,094...112,377,261 		JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:17712420) MGI PMID:17712420 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Nrl neural retina leucine zipper gene acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:11694879) MGI
GO_Central		 PMID:11694879 GO_REF:0000033 NCBI chr14:55,756,973...55,762,438
Ensembl chr14:55,756,435...55,762,438 		JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 acts_upstream_of_or_within IMP (PMID:10516311) MGI PMID:10516311 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784 		JBrowse link
G Rorb RAR-related orphan receptor beta involved_in IMP (MGI:3652638|PMID:16574740), (MGI:4366105|PMID:19805139) UniProt PMID:16574740 PMID:19805139 MGI:3652638 MGI:4366105 NCBI chr19:18,907,966...19,088,560
Ensembl chr19:18,907,969...19,088,560 		JBrowse link
G Rp1 retinitis pigmentosa 1 (human) involved_in IDA (MGI:2676521|PMID:14507858) UniProt PMID:14507858 MGI:2676521 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464 		JBrowse link
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:52,341,698...52,398,796
Ensembl chr14:52,348,161...52,401,003 		JBrowse link
G Rpgrip1l Rpgrip1-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Samd11 sterile alpha motif domain containing 11 involved_in IMP (MGI:6512737|PMID:33603070) UniProt PMID:33603070 MGI:6512737 NCBI chr 4:156,331,423...156,342,409
Ensembl chr 4:156,331,423...156,340,717 		JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in IMP (MGI:6512737|PMID:33603070) UniProt PMID:33603070 MGI:6512737 NCBI chr 3:30,800,481...30,821,323
Ensembl chr 3:30,800,442...30,821,323 		JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 acts_upstream_of_or_within IMP (PMID:19966281) MGI PMID:19966281 NCBI chr 7:63,803,583...63,923,630
Ensembl chr 7:63,803,583...63,919,523 		JBrowse link
retinal rod cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within IMP (PMID:36125046) MGI PMID:36125046 NCBI chr10:111,134,540...111,137,597
Ensembl chr10:111,134,540...111,137,588 		JBrowse link
G Cntf ciliary neurotrophic factor acts_upstream_of IDA (PMID:15207851) MGI PMID:15207851 NCBI chr19:12,740,892...12,742,996
Ensembl chr19:12,741,024...12,742,996 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within IGI
IDA
IMP		 (PMID:19815523) MGI PMID:19815523 NCBI chr 9:107,551,636...107,556,833
Ensembl chr 9:107,551,673...107,556,911 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IGI
IMP
IDA		 (PMID:19815523) MGI PMID:19815523 NCBI chr 3:107,994,120...108,008,748
Ensembl chr 3:108,000,105...108,008,748 		JBrowse link
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:9071226) MGI PMID:9071226 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013 		JBrowse link
G Ptn pleiotrophin involved_in ISO RGD
MGI		 PMID:16914133 GO_REF:0000096 MGI:4417868 RGD:9831439 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Rorb RAR-related orphan receptor beta acts_upstream_of_or_within IMP (PMID:25296752) MGI PMID:25296752 NCBI chr19:18,907,966...19,088,560
Ensembl chr19:18,907,969...19,088,560 		JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of
acts_upstream_of_or_within		 IGI (PMID:19490914) MGI PMID:19490914 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IGI (PMID:19490914) MGI PMID:19490914 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within IMP (PMID:15207851) MGI PMID:15207851 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366 		JBrowse link
retinal rod cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 acts_upstream_of_or_within IMP
IDA		 (PMID:25654255) MGI PMID:25654255 NCBI chr 4:148,888,823...149,039,350
Ensembl chr 4:148,888,886...149,039,346 		JBrowse link
right lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within IMP (PMID:11493558) MGI PMID:11493558 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
right ventricular cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:40,518,438...40,967,988
Ensembl chr15:40,518,431...40,967,988 		JBrowse link
right ventricular compact myocardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:26102480) MGI PMID:26102480 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
rod bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:26607664) MGI PMID:26607664 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:16914133 RGD:9831439 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within IMP (PMID:32960171) MGI PMID:32960171 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997 		JBrowse link
S-shaped body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:16937369) MGI PMID:16937369 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:5009392|PMID:17610272) UniProt PMID:17610272 MGI:5009392 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Pax8 paired box 8 involved_in IEP (MGI:48612|PMID:1723950) UniProt PMID:1723950 MGI:48612 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
sagittal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI-Kruppel family member GLI3 acts_upstream_of_or_within IMP (PMID:20570969) MGI PMID:20570969 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
salivary gland cavitation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 acts_upstream_of_or_within IMP (PMID:18816447) MGI PMID:18816447 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878 		JBrowse link
G Eda ectodysplasin-A acts_upstream_of_or_within IDA (PMID:12629675) MGI PMID:12629675 NCBI chr  X:99,019,212...99,444,366
Ensembl chr  X:99,019,212...99,444,368 		JBrowse link
G Edar ectodysplasin-A receptor acts_upstream_of_or_within IDA (PMID:12629675) MGI PMID:12629675 NCBI chr10:58,436,602...58,511,518
Ensembl chr10:58,436,611...58,511,476 		JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within IMP (PMID:25403566) MGI PMID:25403566 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IDA (PMID:16332353) MGI PMID:16332353 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tgm2 transglutaminase 2, C polypeptide acts_upstream_of_or_within IMP (PMID:15970210) MGI PMID:15970210 NCBI chr 2:157,958,325...157,988,312
Ensembl chr 2:157,958,322...157,988,356 		JBrowse link
salivary gland morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (PMID:11731698) MGI PMID:11731698 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Ctnnd1 catenin delta 1 acts_upstream_of_or_within IMP (PMID:16399075) MGI PMID:16399075 NCBI chr 2:84,417,440...84,489,321
Ensembl chr 2:84,430,415...84,481,109
Ensembl chr 2:84,430,415...84,481,109 		JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within IMP (PMID:10521784) MGI PMID:10521784 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15654336) MGI PMID:15654336 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IMP (PMID:12421715) MGI PMID:12421715 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within IMP (PMID:11731698) MGI PMID:11731698 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Polb polymerase (DNA directed), beta acts_upstream_of_or_within IMP (PMID:24388753) MGI PMID:24388753 NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO (PMID:18080134) BHF-UCL PMID:18080134 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (PMID:18080134) BHF-UCL PMID:18080134 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18080134) BHF-UCL PMID:18080134 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within IMP (PMID:16289463) MGI PMID:16289463 NCBI chr17:66,230,060...66,258,198
Ensembl chr17:66,228,967...66,258,221 		JBrowse link
secondary heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 acts_upstream_of_or_within IGI (PMID:22711842) MGI PMID:22711842 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Lrp2 low density lipoprotein receptor-related protein 2 involved_in IMP (MGI:5770180|PMID:26822476) UniProt PMID:26822476 MGI:5770180 NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in IMP (MGI:3578591|PMID:15890826) UniProt PMID:15890826 MGI:3578591 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mesp1 mesoderm posterior 1 involved_in IDA (MGI:4441249|PMID:18593560) BHF-UCL PMID:18593560 MGI:4441249 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within IMP
IGI		 (PMID:22711842) MGI PMID:22711842 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 acts_upstream_of_or_within IMP (PMID:17519332) MGI PMID:17519332 NCBI chr 5:24,797,620...24,829,649
Ensembl chr 5:24,795,816...24,829,409 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IGI (MGI:5424267|PMID:22569553) CACAO PMID:22569553 MGI:5424267 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
semicircular canal formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297 		JBrowse link
semicircular canal fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:15765517) MGI PMID:15765517 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
semicircular canal morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IGI (PMID:19855134) MGI PMID:19855134 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (PMID:10072433) MGI PMID:10072433 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IGI (PMID:17601531) MGI PMID:17601531 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fgf3 fibroblast growth factor 3 acts_upstream_of_or_within IGI (PMID:17601531) MGI PMID:17601531 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within IMP (PMID:11784868) MGI PMID:11784868 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447 		JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IGI (PMID:19855134) MGI PMID:19855134 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Tbx3 T-box 3 involved_in IMP (MGI:6710296|PMID:33795231) UniProt PMID:33795231 MGI:6710296 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within IMP (PMID:21980308) MGI PMID:21980308 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
seminal vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within IMP (PMID:23786676) MGI PMID:23786676 NCBI chr13:48,414,592...48,419,504
Ensembl chr13:48,414,704...48,419,502 		JBrowse link
sensory organ boundary specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntf5 neurotrophin 5 acts_upstream_of_or_within IMP (PMID:10479455) MGI PMID:10479455 NCBI chr 7:45,063,119...45,066,603
Ensembl chr 7:45,063,119...45,066,603 		JBrowse link
sinus venosus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior 1 involved_in IMP (MGI:1339460|PMID:10393122) BHF-UCL PMID:10393122 MGI:1339460 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536 		JBrowse link
skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2610005L07Rik RIKEN cDNA 2610005L07 gene acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498 		JBrowse link
G Acvr2b activin receptor IIB acts_upstream_of_or_within IMP
IGI		 (PMID:16991118)
(PMID:16845371)		 MGI PMID:16845371 PMID:16991118 NCBI chr 9:119,231,081...119,271,214
Ensembl chr 9:119,231,184...119,264,061 		JBrowse link
G Alx4 aristaless-like homeobox 4 acts_upstream_of_or_within IMP (PMID:9374397) MGI PMID:9374397 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Ankrd11 ankyrin repeat domain 11 acts_upstream_of_or_within IMP
ISO		 (PMID:17986521) MGI PMID:17986521 GO_REF:0000008 NCBI chr 8:123,610,060...123,769,023
Ensembl chr 8:123,610,561...123,769,016 		JBrowse link
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr10:67,928,353...68,114,596
Ensembl chr10:67,928,350...68,114,570 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:7859283) MGI PMID:7859283 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col11a2 collagen, type XI, alpha 2 acts_upstream_of_or_within IMP (PMID:11668593) MGI PMID:11668593 NCBI chr17:34,257,462...34,285,659
Ensembl chr17:34,258,411...34,285,659 		JBrowse link
G Col1a1 collagen, type I, alpha 1 acts_upstream_of_or_within IGI (PMID:17440987) MGI PMID:17440987 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:7276808), (PMID:8192242)
(PMID:7590256), (PMID:9915573)		 MGI PMID:7276808 PMID:7590256 PMID:8192242 PMID:9915573 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Csrnp1 cysteine-serine-rich nuclear protein 1 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 9:119,800,229...119,813,808
Ensembl chr 9:119,800,229...119,813,724 		JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within IMP (PMID:16964445) MGI PMID:16964445 NCBI chr 4:132,701,406...132,729,204
Ensembl chr 4:132,701,406...132,729,221 		JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within IMP (PMID:17554679) MGI PMID:17554679 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Hhip Hedgehog-interacting protein involved_in IMP (MGI:1333378|PMID:10050855) BHF-UCL PMID:10050855 MGI:1333378 NCBI chr 8:80,692,480...80,784,637
Ensembl chr 8:80,692,480...80,784,635 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within IGI
IMP		 (PMID:9012503) MGI PMID:9012503 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838 		JBrowse link
G Hoxb4 homeobox B4 acts_upstream_of_or_within IMP
IGI		 (PMID:9012503) MGI PMID:9012503 NCBI chr11:96,209,093...96,212,464
Ensembl chr11:96,209,093...96,212,464 		JBrowse link
G Hoxb8 homeobox B8 acts_upstream_of_or_within IGI
IMP		 (PMID:11311170) MGI PMID:11311170 NCBI chr11:96,170,227...96,176,151
Ensembl chr11:96,172,731...96,176,141 		JBrowse link
G Hoxc8 homeobox C8 acts_upstream_of_or_within IMP
IGI		 (PMID:11311170) MGI PMID:11311170 NCBI chr15:102,898,971...102,902,707
Ensembl chr15:102,899,039...102,902,543 		JBrowse link
G Hoxd8 homeobox D8 acts_upstream_of_or_within IMP
IGI		 (PMID:11311170) MGI PMID:11311170 NCBI chr 2:74,534,973...74,538,277
Ensembl chr 2:74,534,959...74,538,277 		JBrowse link
G Hyal2 hyaluronoglucosaminidase 2 acts_upstream_of_or_within IMP (PMID:18772348) MGI PMID:18772348 NCBI chr 9:107,445,096...107,449,975
Ensembl chr 9:107,445,144...107,449,978 		JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (PMID:9097952) MGI PMID:9097952 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423 		JBrowse link
G Lama5 laminin, alpha 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:15469977) MGI PMID:15469977 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within IGI (PMID:17440987) MGI PMID:17440987 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048 		JBrowse link
G Myc myelocytomatosis oncogene acts_upstream_of_or_within IMP (PMID:17523175) MGI PMID:17523175 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within IMP (PMID:10572046) MGI PMID:10572046 NCBI chr 5:41,918,826...41,921,563
Ensembl chr 5:41,918,826...41,921,844 		JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within IMP (PMID:24824078) MGI PMID:24824078 NCBI chr11:82,791,594...82,799,272
Ensembl chr11:82,791,594...82,799,237 		JBrowse link
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 acts_upstream_of_or_within IMP (PMID:18519738) MGI PMID:18519738 NCBI chr 5:122,781,990...122,830,399
Ensembl chr 5:122,781,974...122,829,495 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133 		JBrowse link
G Plekha1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 7:130,462,281...130,515,224
Ensembl chr 7:130,467,486...130,515,042 		JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator acts_upstream_of_or_within IMP (PMID:16571658) MGI PMID:16571658 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within IMP (PMID:9160754) MGI PMID:9160754 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Rab33b RAB33B, member RAS oncogene family involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:51,391,387...51,403,649
Ensembl chr 3:51,391,341...51,403,653 		JBrowse link
G Recql4 RecQ protein-like 4 acts_upstream_of_or_within IMP (PMID:15703196) MGI PMID:15703196 NCBI chr15:76,587,753...76,594,820
Ensembl chr15:76,587,753...76,594,748 		JBrowse link
G Rflna refilin A involved_in
acts_upstream_of_or_within		 IBA
IGI		 (PMID:24436304) GO_Central
MGI		 PMID:24436304 GO_REF:0000033 NCBI chr 5:125,080,512...125,089,611
Ensembl chr 5:125,080,285...125,089,611 		JBrowse link
G Rflnb refilin B acts_upstream_of_or_within
involved_in		 IGI
IBA		 (PMID:24436304) MGI
GO_Central		 PMID:24436304 GO_REF:0000033 NCBI chr11:75,910,020...75,918,608
Ensembl chr11:75,910,020...75,918,608 		JBrowse link
G Runx2 runt related transcription factor 2 acts_upstream_of_or_within IMP (PMID:15030764) MGI PMID:15030764 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684 		JBrowse link
G Ryk receptor-like tyrosine kinase acts_upstream_of_or_within IMP (PMID:10932185) MGI PMID:10932185 NCBI chr 9:102,712,119...102,785,506
Ensembl chr 9:102,712,116...102,785,504 		JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 3:67,972,135...68,533,815
Ensembl chr 3:67,972,135...68,533,814 		JBrowse link
G Sgpl1 sphingosine phosphate lyase 1 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr10:60,934,421...60,983,463
Ensembl chr10:60,934,421...60,983,482 		JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in IMP (MGI:5800302|PMID:27711054) UniProt PMID:27711054 MGI:5800302 NCBI chr11:32,297,777...32,378,189
Ensembl chr11:32,297,820...32,378,173 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within IMP (PMID:22318228) MGI PMID:22318228 NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IMP (PMID:12874121) MGI PMID:12874121 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within IMP (PMID:21715716) MGI PMID:21715716 NCBI chr15:9,578,279...9,748,954
Ensembl chr15:9,578,279...9,748,954 		JBrowse link
G Tbx4 T-box 4 involved_in ISS
ISO		 (MGI:3696504|PMID:10945475) UniProt
MGI		 PMID:10945475 GO_REF:0000119 MGI:3696504 MGI:4834177 NCBI chr11:85,777,193...85,806,923
Ensembl chr11:85,777,248...85,806,923 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within IMP (PMID:8955271) MGI PMID:8955271 NCBI chr 2:151,984,973...151,991,017
Ensembl chr 2:151,985,481...151,991,017 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:8622765) MGI PMID:8622765 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I acts_upstream_of_or_within IGI (PMID:16845371) MGI PMID:16845371 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr 3:65,435,868...65,462,939
Ensembl chr 3:65,435,831...65,462,939 		JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within IMP (PMID:24001775) MGI PMID:24001775 NCBI chr 9:119,723,961...119,755,652
Ensembl chr 9:119,723,944...119,755,653 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Wwox WW domain-containing oxidoreductase acts_upstream_of_or_within IMP (PMID:18487609) MGI PMID:18487609 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447 		JBrowse link
G Zfand5 zinc finger, AN1-type domain 5 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr19:21,249,150...21,264,204
Ensembl chr19:21,249,642...21,264,204 		JBrowse link
G Zfp640 zinc finger protein 640 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr13:66,817,010...66,828,867
Ensembl chr13:66,817,992...66,821,393 		JBrowse link
G Zfp950 zinc finger protein 950 acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr19:61,042,692...61,129,297
Ensembl chr19:61,042,278...61,129,278 		JBrowse link
skin morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP-binding cassette, sub-family A member 12 NOT|involved_in IMP (MGI:6161848|PMID:27551807) UniProt PMID:27551807 MGI:6161848 NCBI chr 1:71,282,249...71,454,069
Ensembl chr 1:71,281,435...71,454,069 		JBrowse link
G Ahdc1 AT hook, DNA binding motif, containing 1 involved_in IMP
ISO		 (MGI:7294317|PMID:35585237) UniProt
MGI		 PMID:35585237 GO_REF:0000119 MGI:4834177 MGI:7294317 NCBI chr 4:132,738,797...132,805,421
Ensembl chr 4:132,738,571...132,805,421 		JBrowse link
G Cdsn corneodesmosin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:35,854,044...35,867,811
Ensembl chr17:35,863,025...35,868,077 		JBrowse link
G Col1a1 collagen, type I, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col1a2 collagen, type I, alpha 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:4,505,618...4,541,543
Ensembl chr 6:4,504,814...4,541,544 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in IMP (MGI:3629275|PMID:16648858) UniProt PMID:16648858 MGI:3629275 NCBI chr 4:150,938,253...150,953,346
Ensembl chr 4:150,938,376...150,953,349 		JBrowse link
G Itga2 integrin alpha 2 involved_in ISO RGD
MGI		 PMID:17118629 GO_REF:0000096 MGI:4417868 RGD:1625131 NCBI chr13:114,969,617...115,068,588
Ensembl chr13:114,969,617...115,068,636 		JBrowse link
G Itga6 integrin alpha 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:71,617,236...71,688,761
Ensembl chr 2:71,575,960...71,688,760 		JBrowse link
G Itgb4 integrin beta 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:115,865,556...115,899,238
Ensembl chr11:115,865,535...115,899,238 		JBrowse link
G Psen1 presenilin 1 involved_in IMP (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 involved_in IMP (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:20047077) MGI PMID:20047077 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101 		JBrowse link
G Trp63 transformation related protein 63 acts_upstream_of_or_within IMP (PMID:17041603) MGI PMID:17041603 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852 		JBrowse link
G Vps33b vacuolar protein sorting 33B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:79,919,369...79,941,323
Ensembl chr 7:79,919,397...79,941,502 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A acts_upstream_of_or_within IMP MGI MGI:48652 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (PMID:27340223) MGI PMID:27340223 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629 		JBrowse link
specification of animal organ identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within IMP (PMID:20615956) MGI PMID:20615956 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458 		JBrowse link
specification of animal organ position term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:17071745) MGI PMID:17071745 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within IGI (PMID:9520319) MGI PMID:9520319 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IDA (PMID:17071745) MGI PMID:17071745 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Irx1 Iroquois homeobox 1 involved_in IEP (MGI:3758158|PMID:17875669) UniProt PMID:17875669 MGI:3758158 NCBI chr13:72,106,351...72,111,842
Ensembl chr13:72,106,040...72,111,842 		JBrowse link
G Irx2 Iroquois homeobox 2 involved_in IEP (MGI:3758158|PMID:17875669) UniProt PMID:17875669 MGI:3758158 NCBI chr13:72,771,463...72,782,315
Ensembl chr13:72,776,939...72,782,317 		JBrowse link
G Irx3 Iroquois related homeobox 3 involved_in IEP (MGI:3758158|PMID:17875669) UniProt PMID:17875669 MGI:3758158 NCBI chr 8:92,525,139...92,528,282
Ensembl chr 8:92,525,153...92,528,695 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
spleen trabecula formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc40a1 solute carrier family 40 (iron-regulated transporter), member 1 acts_upstream_of_or_within IMP (PMID:15342464) MGI PMID:15342464 NCBI chr 1:45,947,230...45,965,690
Ensembl chr 1:45,947,228...45,965,683 		JBrowse link
submandibular salivary gland formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 ISO RGD PMID:18784978 RGD:5688282 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within IMP (PMID:11062007) MGI PMID:11062007 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
superior endocardial cushion morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr2 transforming growth factor, beta receptor II NOT|involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within IMP (PMID:14676301) MGI PMID:14676301 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821 		JBrowse link
G Pgr progesterone receptor acts_upstream_of_or_within IMP (PMID:10733525) MGI PMID:10733525 NCBI chr 9:8,890,017...8,968,612
Ensembl chr 9:8,899,834...8,968,612 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within IMP (PMID:10733525) MGI PMID:10733525 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
tongue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO RGD PMID:16828469 RGD:2289002 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IMP (MGI:3809313|PMID:18816858) UniProt PMID:18816858 MGI:3809313 NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within IMP (PMID:27158779) MGI PMID:27158779 NCBI chr 7:44,545,517...44,552,053
Ensembl chr 7:44,545,503...44,552,055 		JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within IMP (PMID:9420327) MGI PMID:9420327 NCBI chr15:102,829,566...102,837,249
Ensembl chr15:102,829,538...102,837,249 		JBrowse link
G Intu inturned planar cell polarity protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204 		JBrowse link
G Krt13 keratin 13 ISO RGD PMID:16271699 RGD:1600171 NCBI chr11:100,008,153...100,012,392
Ensembl chr11:100,008,153...100,012,392 		JBrowse link
G Shh sonic hedgehog involved_in ISO RGD
MGI		 PMID:15581865 GO_REF:0000096 MGI:4417868 RGD:1580345 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tbx1 T-box 1 involved_in IMP (MGI:3809313|PMID:18816858) UniProt PMID:18816858 MGI:3809313 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:27158779) MGI PMID:27158779 GO_REF:0000119 MGI:4834177 NCBI chr11:21,521,969...21,848,686
Ensembl chr11:21,522,235...21,848,989 		JBrowse link
tooth eruption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc154 coiled-coil domain containing 154 acts_upstream_of_or_within IMP (PMID:20121924) MGI PMID:20121924 NCBI chr17:25,381,142...25,390,887
Ensembl chr17:25,381,435...25,390,887 		JBrowse link
G Fam20a FAM20A, golgi associated secretory pathway pseudokinase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:109,563,752...109,613,989
Ensembl chr11:109,560,575...109,613,105 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:30683845) MGI PMID:30683845 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892 		JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within IMP (PMID:25811986) MGI PMID:25811986 NCBI chr 6:51,500,882...51,567,659
Ensembl chr 6:51,500,881...51,567,659 		JBrowse link
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 acts_upstream_of_or_within IMP (PMID:22245629) MGI PMID:22245629 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133 		JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 acts_upstream_of_or_within IMP (PMID:26234751) MGI PMID:26234751 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483 		JBrowse link
tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amelx amelogenin, X-linked involved_in IMP (MGI:2149207|PMID:11406633) BHF-UCL PMID:11406633 MGI:2149207 NCBI chr  X:167,959,110...167,970,205
Ensembl chr  X:167,959,110...167,970,196 		JBrowse link
G Col1a1 collagen, type I, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:29533727) MGI PMID:29533727 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057 		JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:77,521,942...77,722,844
Ensembl chr10:77,522,403...77,722,855 		JBrowse link
trachea cartilage morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa5 homeobox A5 acts_upstream_of_or_within IMP (PMID:9441679) MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IGI (PMID:18256198) MGI PMID:18256198 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within IGI (PMID:18256198) MGI PMID:18256198 NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222 		JBrowse link
G Wnt7b wingless-type MMTV integration site family, member 7B acts_upstream_of_or_within IMP (PMID:18367557) MGI PMID:18367557 NCBI chr15:85,419,638...85,466,022
Ensembl chr15:85,419,638...85,466,674 		JBrowse link
trachea formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP (PMID:18692041) MGI PMID:18692041 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:19805295) MGI PMID:19805295 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913 		JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within IGI (PMID:25100655) MGI PMID:25100655 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:18990706) MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
trachea morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:18231602), (PMID:18692041) MGI PMID:18231602 PMID:18692041 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within IMP (PMID:15295088), (PMID:9441679) MGI PMID:9441679 PMID:15295088 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (PMID:9731532) MGI PMID:9731532 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II acts_upstream_of_or_within IMP (PMID:18990706) MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IMP (MGI:3710018|PMID:17442697) UniProt PMID:17442697 MGI:3710018 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within IGI (PMID:21731775) MGI PMID:21731775 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IGI (PMID:21731775) MGI PMID:21731775 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Lhx1 LIM homeobox protein 1 acts_upstream_of_or_within IGI (PMID:21731775) MGI PMID:21731775 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361 		JBrowse link
G Lzts2 leucine zipper, putative tumor suppressor 2 acts_upstream_of_or_within IMP (PMID:21949185) MGI PMID:21949185 NCBI chr19:45,003,615...45,015,554
Ensembl chr19:45,002,853...45,015,550 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within IGI (PMID:21731775) MGI PMID:21731775 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 IEP
IGI		 (MGI:48612|PMID:1723950)
(PMID:21731775)		 UniProt
MGI		 PMID:1723950 PMID:21731775 MGI:48612 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 acts_upstream_of_or_within IGI (PMID:21212101) MGI PMID:21212101 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IGI (PMID:21212101) MGI PMID:21212101 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (PMID:20040500) MGI PMID:20040500 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645 		JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IMP (MGI:3611949|PMID:16319112) UniProt PMID:16319112 MGI:3611949 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor involved_in IMP (MGI:81287|PMID:8657307) UniProt PMID:8657307 MGI:81287 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in IDA (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within IMP (PMID:9637690) MGI PMID:9637690 NCBI chr 3:144,135,462...144,275,977
Ensembl chr 3:144,135,467...144,275,942 		JBrowse link
G Nog noggin involved_in IDA (MGI:3714585|PMID:17522159) UniProt PMID:17522159 MGI:3714585 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 acts_upstream_of_or_within IMP (PMID:7517224) MGI PMID:7517224 NCBI chr 2:113,158,029...113,547,113
Ensembl chr 2:113,158,081...113,547,112 		JBrowse link
G Kif26b kinesin family member 26B acts_upstream_of_or_within IMP (PMID:20439720) MGI PMID:20439720 NCBI chr 1:178,356,690...178,766,765
Ensembl chr 1:178,356,690...178,766,765 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in
acts_upstream_of_or_within		 IMP (MGI:2149437|PMID:11688560)
(PMID:16839447)		 UniProt
MGI		 PMID:11688560 PMID:16839447 MGI:2149437 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790 		JBrowse link
ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 involved_in IEP (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 6:67,511,043...67,512,806
Ensembl chr 6:67,511,046...67,512,780 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 involved_in ISO (PMID:9757009) UniProt PMID:9757009 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
uterus morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ash1l ASH1 like histone lysine methyltransferase acts_upstream_of_or_within IMP (PMID:26333994) MGI PMID:26333994 NCBI chr 3:88,857,721...88,986,682
Ensembl chr 3:88,857,929...88,986,682 		JBrowse link
G Kdm5b lysine demethylase 5B acts_upstream_of_or_within IMP (PMID:24802759) MGI PMID:24802759 NCBI chr 1:134,487,916...134,560,621
Ensembl chr 1:134,487,909...134,563,023 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947 		JBrowse link
G Stra6 stimulated by retinoic acid gene 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:57,971,076...58,061,287
Ensembl chr 9:57,971,071...58,061,279 		JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in IMP (MGI:3777712|PMID:14695376) UniProt PMID:14695376 MGI:3777712 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345 		JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B acts_upstream_of_or_within IMP (PMID:16054034) MGI PMID:16054034 NCBI chr11:103,618,188...103,666,098
Ensembl chr11:103,618,190...103,640,647 		JBrowse link
ventricular cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 involved_in IMP (MGI:3040529|PMID:15073151), (MGI:3701380|PMID:17336907) BHF-UCL PMID:15073151 PMID:17336907 MGI:3040529 MGI:3701380 NCBI chr 6:87,405,976...87,411,494
Ensembl chr 6:87,405,976...87,414,659 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IMP (PMID:17029294) MGI PMID:17029294 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Epo erythropoietin involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 5:137,481,282...137,484,078
Ensembl chr 5:137,481,282...137,531,504 		JBrowse link
G Epor erythropoietin receptor involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:21,870,193...21,874,915
Ensembl chr 9:21,870,193...21,874,802 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:16687131) MGI PMID:16687131 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079 		JBrowse link
G Fkbp1a FK506 binding protein 1a involved_in IMP (MGI:1195585|PMID:9461216) BHF-UCL PMID:9461216 MGI:1195585 NCBI chr 2:151,384,403...151,403,611
Ensembl chr 2:151,384,403...151,403,612 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within IGI (PMID:16839542) MGI PMID:16839542 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IGI (PMID:16839542) MGI PMID:16839542 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:9500551) MGI PMID:9500551 GO_REF:0000119 MGI:4834177 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644 		JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain involved_in IGI (MGI:3829137|PMID:17519333) BHF-UCL PMID:17519333 MGI:3829137 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E acts_upstream_of_or_within IMP (PMID:11784869) MGI PMID:11784869 NCBI chr15:74,826,874...74,831,753
Ensembl chr15:74,826,900...74,831,752 		JBrowse link
G Mybpc3 myosin binding protein C, cardiac involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:90,948,459...90,966,862
Ensembl chr 2:90,948,489...90,966,861 		JBrowse link
G Myh6 myosin, heavy polypeptide 6, cardiac muscle, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:55,179,378...55,205,553
Ensembl chr14:55,179,378...55,204,384 		JBrowse link
G Myh7 myosin, heavy polypeptide 7, cardiac muscle, beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:55,208,141...55,232,083
Ensembl chr14:55,208,141...55,232,083 		JBrowse link
G Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:122,230,787...122,251,536
Ensembl chr 5:122,239,014...122,251,535 		JBrowse link
G Myl3 myosin, light polypeptide 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:110,592,746...110,598,870
Ensembl chr 9:110,570,929...110,598,866 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 acts_upstream_of_or_within IMP (PMID:18729827) MGI PMID:18729827 NCBI chr13:99,456,157...99,481,215
Ensembl chr13:99,456,155...99,481,213 		JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within IMP (PMID:9428411) MGI PMID:9428411 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969 		JBrowse link
G Smad7 SMAD family member 7 involved_in IMP (MGI:3836072|PMID:18952608) BHF-UCL PMID:18952608 MGI:3836072 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IMP (MGI:67103|PMID:8009224) BHF-UCL PMID:8009224 MGI:67103 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IMP (MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:2663364 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
G Tnnc1 troponin C, cardiac/slow skeletal involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:30,930,274...30,933,671
Ensembl chr14:30,930,269...30,933,686 		JBrowse link
G Tnni1 troponin I, skeletal, slow 1 acts_upstream_of_or_within IMP (PMID:9915769) MGI PMID:9915769 NCBI chr 1:135,709,252...135,738,727
Ensembl chr 1:135,707,172...135,738,727 		JBrowse link
G Tnni3 troponin I, cardiac 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:4,521,304...4,526,228
Ensembl chr 7:4,521,304...4,527,228 		JBrowse link
G Tnnt2 troponin T2, cardiac involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:16326803) MGI PMID:16326803 GO_REF:0000119 MGI:4834177 NCBI chr 1:135,763,933...135,780,006
Ensembl chr 1:135,764,092...135,779,998 		JBrowse link
G Tpm1 tropomyosin 1, alpha involved_in IMP
ISO		 (MGI:3802907|PMID:17556658) BHF-UCL
MGI		 PMID:17556658 GO_REF:0000119 MGI:3802907 MGI:4834177 NCBI chr 9:66,929,872...66,956,954
Ensembl chr 9:66,929,872...66,956,688 		JBrowse link
ventricular compact myocardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573 		JBrowse link
G Dsp desmoplakin involved_in IMP (MGI:3723417|PMID:16917092) BHF-UCL PMID:16917092 MGI:3723417 NCBI chr13:38,335,357...38,382,553
Ensembl chr13:38,335,270...38,382,553 		JBrowse link
G Lrp2 low density lipoprotein receptor-related protein 2 involved_in IMP (MGI:5770180|PMID:26822476) UniProt PMID:26822476 MGI:5770180 NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 involved_in IMP (MGI:3807433|PMID:18368538) UniProt PMID:18368538 MGI:3807433 NCBI chr14:104,699,111...104,705,554
Ensembl chr14:104,699,112...104,705,435 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I involved_in IMP (MGI:3820811|PMID:18718461) BHF-UCL PMID:18718461 MGI:3820811 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IMP (MGI:2663364|PMID:12773577), (MGI:3818140|PMID:17704211) BHF-UCL PMID:12773577 PMID:17704211 MGI:2663364 MGI:3818140 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
ventricular septum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in IMP (MGI:3610266|PMID:16140292) BHF-UCL PMID:16140292 MGI:3610266 NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169 		JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in ISO (PMID:32323311) BHF-UCL PMID:32323311 NCBI chr18:58,967,819...59,186,754
Ensembl chr18:58,969,739...59,187,132 		JBrowse link
G Aplnr apelin receptor involved_in IMP (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:2175930|PMID:11854453) BHF-UCL PMID:11854453 MGI:2175930 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IMP (MGI:2429424|PMID:12441304), (MGI:3851675|PMID:19409885) BHF-UCL PMID:12441304 PMID:19409885 MGI:2429424 MGI:3851675 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP (MGI:3054669|PMID:15475956) BHF-UCL PMID:15475956 MGI:3054669 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 acts_upstream_of_or_within IMP (PMID:16966370) MGI PMID:16966370 NCBI chr 8:125,635,325...125,676,063
Ensembl chr 8:125,635,326...125,676,063 		JBrowse link
G Fgfrl1 fibroblast growth factor receptor-like 1 acts_upstream_of_or_within IMP (PMID:19383940) MGI PMID:19383940 NCBI chr 5:108,842,051...108,854,816
Ensembl chr 5:108,840,248...108,854,790 		JBrowse link
G Fzd1 frizzled class receptor 1 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035 		JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within IGI (PMID:20940229) MGI PMID:20940229 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within IMP (PMID:10969038) MGI PMID:10969038 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IMP (MGI:4354447|PMID:19609448) BHF-UCL PMID:19609448 MGI:4354447 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in IMP (MGI:2386835|PMID:12372254) BHF-UCL PMID:12372254 MGI:2386835 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like involved_in IGI (MGI:3783952|PMID:17303760) BHF-UCL PMID:17303760 MGI:3783952 NCBI chr 4:123,127,349...123,143,663
Ensembl chr 4:123,127,349...123,143,668 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of IGI (PMID:19056682) MGI PMID:19056682 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within IGI (PMID:18329372) MGI PMID:18329372 NCBI chr14:115,281,103...115,281,186
Ensembl chr14:115,281,103...115,281,186 		JBrowse link
G Mir18 microRNA 18 acts_upstream_of_or_within IGI (PMID:18329372) MGI PMID:18329372 NCBI chr14:115,281,283...115,281,378
Ensembl chr14:115,281,283...115,281,378 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within IGI (PMID:18329372) MGI PMID:18329372 NCBI chr14:115,281,432...115,281,513
Ensembl chr14:115,281,432...115,281,513 		JBrowse link
G Mir19b-1 microRNA 19b-1 acts_upstream_of_or_within IGI (PMID:18329372) MGI PMID:18329372 NCBI chr14:115,281,737...115,281,823
Ensembl chr14:115,281,737...115,281,823 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within IGI (PMID:18329372) MGI PMID:18329372 NCBI chr14:115,281,589...115,281,695
Ensembl chr14:115,281,589...115,281,695 		JBrowse link
G Mir92-1 microRNA 92-1 acts_upstream_of_or_within IGI (PMID:18329372) MGI PMID:18329372 NCBI chr14:115,281,859...115,281,938
Ensembl chr14:115,281,859...115,281,938 		JBrowse link
G Nfatc1 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 acts_upstream_of_or_within IMP (PMID:9515964) MGI PMID:9515964 NCBI chr18:80,649,418...80,756,286
Ensembl chr18:80,649,420...80,756,286 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Nog noggin involved_in IMP (MGI:3783944|PMID:17218603) BHF-UCL PMID:17218603 MGI:3783944 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell involved_in IGI (MGI:6158784|PMID:27107132) BHF-UCL PMID:27107132 MGI:6158784 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472 		JBrowse link
G Notch1 notch 1 involved_in IMP
ISO
IGI		 (MGI:6158728|PMID:26491108)
(MGI:6158784|PMID:27107132)		 BHF-UCL
MGI		 PMID:26491108 PMID:27107132 GO_REF:0000119 MGI:4834177 MGI:6158728 MGI:6158784 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 acts_upstream_of_or_within IMP (PMID:18292603) MGI PMID:18292603 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IMP (MGI:3830437|PMID:19091769) BHF-UCL PMID:19091769 MGI:3830437 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911 		JBrowse link
G Rbm15 RNA binding motif protein 15 acts_upstream_of_or_within IMP (PMID:18981216) MGI PMID:18981216 NCBI chr 3:107,212,827...107,244,102
Ensembl chr 3:107,232,737...107,240,989 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IGI (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in IGI (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:73,688,725...75,244,331
Ensembl chr16:73,688,727...74,208,713 		JBrowse link
G Sav1 salvador family WW domain containing 1 acts_upstream_of_or_within IMP (PMID:21512031) MGI PMID:21512031 NCBI chr12:70,011,786...70,033,864
Ensembl chr12:70,011,786...70,033,776 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in IMP (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr 5:48,138,633...48,465,077
Ensembl chr 5:48,140,480...48,465,075 		JBrowse link
G Slit3 slit guidance ligand 3 involved_in IMP (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr11:35,012,283...35,599,334
Ensembl chr11:35,012,051...35,599,334 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (MGI:3689643|PMID:16151019) BHF-UCL PMID:16151019 MGI:3689643 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Smad7 SMAD family member 7 involved_in IMP (MGI:3836072|PMID:18952608) BHF-UCL PMID:18952608 MGI:3836072 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in IMP (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573 		JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 involved_in IMP (MGI:3603061|PMID:16109771) BHF-UCL PMID:16109771 MGI:3603061 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696 		JBrowse link
G Tbx3 T-box 3 acts_upstream_of_or_within IMP (PMID:18467625) MGI PMID:18467625 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP
TAS		 (MGI:894212|PMID:9217007)
(MGI:4943617|PMID:20299672)		 BHF-UCL
DFLAT		 PMID:9217007 PMID:20299672 MGI:4943617 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I involved_in IMP (MGI:3820811|PMID:18718461) BHF-UCL PMID:18718461 MGI:3820811 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II involved_in IMP (MGI:3801267|PMID:17050629) BHF-UCL PMID:17050629 MGI:3801267 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IMP (MGI:3818140|PMID:17704211) BHF-UCL PMID:17704211 MGI:3818140 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within IMP (PMID:17767158) MGI PMID:17767158 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 involved_in IMP (MGI:3583527|PMID:14614148) BHF-UCL PMID:14614148 MGI:3583527 NCBI chr 8:123,008,595...123,064,601
Ensembl chr 8:123,008,880...123,063,990 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:40,518,438...40,967,988
Ensembl chr15:40,518,431...40,967,988 		JBrowse link
ventricular trabecula myocardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor, type 1A involved_in IMP (MGI:2175930|PMID:11854453), (MGI:3040576|PMID:15073157) BHF-UCL PMID:11854453 PMID:15073157 MGI:2175930 MGI:3040576 NCBI chr14:34,133,018...34,225,335
Ensembl chr14:34,132,691...34,225,298 		JBrowse link
G Ccm2l cerebral cavernous malformation 2-like acts_upstream_of_or_within IGI (PMID:22898778) MGI PMID:22898778 NCBI chr 2:152,907,857...152,923,655
Ensembl chr 2:152,907,875...152,923,655 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within IMP (PMID:26102480) MGI PMID:26102480 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in IMP (MGI:3056036|PMID:15466159) BHF-UCL PMID:15466159 MGI:3056036 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443 		JBrowse link
G Eng endoglin involved_in IMP (MGI:4368063|PMID:19703439) BHF-UCL PMID:19703439 MGI:4368063 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Foxh1 forkhead box H1 involved_in IMP (MGI:3055632|PMID:15363409) BHF-UCL PMID:15363409 MGI:3055632 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within IGI (PMID:22898778) MGI PMID:22898778 NCBI chr16:33,504,754...33,591,946
Ensembl chr16:33,504,740...33,591,946 		JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 acts_upstream_of_or_within IGI (PMID:15680351) MGI PMID:15680351 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316 		JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 acts_upstream_of_or_within IGI (PMID:15680351) MGI PMID:15680351 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G Med1 mediator complex subunit 1 involved_in IMP (MGI:2158098|PMID:11724781) BHF-UCL PMID:11724781 MGI:2158098 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within IMP (PMID:15109497) MGI PMID:15109497 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:3701380|PMID:17336907) BHF-UCL PMID:17336907 MGI:3701380 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:32,299,493...33,381,858
Ensembl chr 8:32,304,579...33,374,825
Ensembl chr 8:32,304,579...33,374,825 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IMP (MGI:3701380|PMID:17336907) BHF-UCL PMID:17336907 MGI:3701380 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IMP (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I involved_in IMP (MGI:3820811|PMID:18718461) BHF-UCL PMID:18718461 MGI:3820811 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within IMP (PMID:16314518) MGI PMID:16314518 NCBI chr 4:149,412,873...149,512,618
Ensembl chr 4:149,412,873...149,511,206 		JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase receptor type Q acts_upstream_of_or_within IMP (PMID:22357859) MGI PMID:22357859 NCBI chr10:107,350,224...107,555,939
Ensembl chr10:107,352,910...107,555,912 		JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 (I-isoform) involved_in IMP (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chr 9:95,634,695...95,727,359
Ensembl chr 9:95,634,695...95,727,364 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    developmental process 7369
      anatomical structure morphogenesis 3041
        animal organ morphogenesis 1198
          animal organ formation + 77
          bone morphogenesis + 117
          brain morphogenesis + 46
          bronchus morphogenesis + 2
          cartilage morphogenesis + 12
          chaeta morphogenesis + 0
          embryonic organ morphogenesis + 340
          establishment of animal organ orientation 2
          genitalia morphogenesis + 17
          gland morphogenesis + 171
          gonad morphogenesis + 3
          heart morphogenesis + 300
          imaginal disc morphogenesis + 0
          kidney morphogenesis + 115
          larynx morphogenesis 3
          lung morphogenesis + 76
          mesenchyme morphogenesis + 59
          muscle organ morphogenesis + 97
          negative regulation of animal organ morphogenesis + 3
          nematode pharynx morphogenesis + 0
          odontogenesis + 155
          oviduct morphogenesis 0
          pancreas morphogenesis + 4
          positive regulation of animal organ morphogenesis + 42
          proboscis morphogenesis + 0
          regulation of animal organ morphogenesis + 112
          sensory organ morphogenesis + 337
          skeletal system morphogenesis + 270
          skin morphogenesis 15
          specification of animal organ axis polarity 0
          specification of animal organ position 3
          spermathecum morphogenesis 0
          swim bladder morphogenesis + 0
          trabecula formation + 30
          trachea morphogenesis + 12
          ureter morphogenesis + 9
          uterus morphogenesis 6
Path 2
Term Annotations click to browse term
  biological_process 28573
    developmental process 7369
      anatomical structure development 6841
        anatomical structure morphogenesis 3041
          animal organ morphogenesis 1198
            animal organ formation + 77
            bone morphogenesis + 117
            brain morphogenesis + 46
            bronchus morphogenesis + 2
            cartilage morphogenesis + 12
            chaeta morphogenesis + 0
            embryonic organ morphogenesis + 340
            establishment of animal organ orientation 2
            genitalia morphogenesis + 17
            gland morphogenesis + 171
            gonad morphogenesis + 3
            heart morphogenesis + 300
            imaginal disc morphogenesis + 0
            kidney morphogenesis + 115
            larynx morphogenesis 3
            lung morphogenesis + 76
            mesenchyme morphogenesis + 59
            muscle organ morphogenesis + 97
            negative regulation of animal organ morphogenesis + 3
            nematode pharynx morphogenesis + 0
            odontogenesis + 155
            oviduct morphogenesis 0
            pancreas morphogenesis + 4
            positive regulation of animal organ morphogenesis + 42
            proboscis morphogenesis + 0
            regulation of animal organ morphogenesis + 112
            sensory organ morphogenesis + 337
            skeletal system morphogenesis + 270
            skin morphogenesis 15
            specification of animal organ axis polarity 0
            specification of animal organ position 3
            spermathecum morphogenesis 0
            swim bladder morphogenesis + 0
            trabecula formation + 30
            trachea morphogenesis + 12
            ureter morphogenesis + 9
            uterus morphogenesis 6
paths to the root