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ONTOLOGY REPORT - ANNOTATIONS


Term:specification of symmetry
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Accession:GO:0009799 term browser browse the term
Definition:The establishment of an organism's body plan or part of an organism such that a similar arrangement in form and relationship of parts around a common axis, or around each side of a plane is created.
Synonyms:exact_synonym: determination of symmetry


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detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (MGI:4946570|PMID:21307093) BHF-UCL PMID:21307093 MGI:4946570 NCBI chr16:119,639...199,418 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G TMEM107 transmembrane protein 107 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6405644|PMID:31887266) Ensembl
MGI
PMID:31887266 GO_REF:0000107 MGI:6405644 NCBI chr 5:32,991,000...32,993,319
Ensembl chr 5:32,991,021...32,993,248
JBrowse link
determination of bilateral symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3575989|PMID:15731404) Ensembl
MGI
PMID:15731404 GO_REF:0000107 MGI:3575989 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030
JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC39 coiled-coil domain containing 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3839019|PMID:18043505) UniProt
MGI
PMID:18043505 GO_REF:0000024 MGI:3839019 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773
JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418
JBrowse link
G GREM2 gremlin 2, DAN family BMP antagonist involved_in ISO (MGI:5507937|PMID:23063586) UniProt PMID:23063586 MGI:5507937 NCBI chr 7:32,048,151...32,157,698
Ensembl chr 7:32,048,183...32,157,146
JBrowse link
G MICOS10 mitochondrial contact site and cristae organizing system subunit 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:79,068,865...79,102,818
Ensembl chr 2:79,041,105...79,102,820
JBrowse link
G NBL1 NBL1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:79,040,206...79,102,792
Ensembl chr 2:79,041,105...79,102,820
JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:3574743|PMID:15750185) MGI PMID:15750185 MGI:3574743 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:49,225,351...49,228,940
Ensembl chr20:49,225,990...49,228,940
JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (MGI:1927045|PMID:11076684) MGI PMID:11076684 MGI:1927045 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO (MGI:1203269|PMID:9576835) MGI PMID:9576835 MGI:1203269 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958
JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3839019|PMID:18043505) UniProt
MGI
PMID:18043505 GO_REF:0000024 MGI:3839019 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773
JBrowse link
G MMP21 matrix metallopeptidase 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:34,936,976...34,944,110
Ensembl chr28:34,935,186...34,944,316
JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (MGI:5607335|PMID:25192045) MGI PMID:25192045 MGI:5607335 NCBI chr20:49,917,183...49,926,417
Ensembl chr20:49,917,350...49,926,424
JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1328649|PMID:10349618) Ensembl
MGI
PMID:10349618 GO_REF:0000107 MGI:1328649 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352
JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAND5 DAN domain BMP antagonist family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,225,351...49,228,940
Ensembl chr20:49,225,990...49,228,940
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAH11 dynein axonemal heavy chain 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3785303|PMID:18414654) Ensembl
MGI
PMID:18414654 GO_REF:0000107 MGI:3785303 NCBI chr14:35,468,080...35,784,621
Ensembl chr14:35,468,154...35,784,806
JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3522525|PMID:15531373) Ensembl
MGI
PMID:15531373 GO_REF:0000107 MGI:3522525 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652
JBrowse link
G ACVR1C activin A receptor type 1C NOT|acts_upstream_of_or_within ISO (MGI:3511374|PMID:15485907) MGI PMID:15485907 MGI:3511374 NCBI chr36:3,534,231...3,583,310
Ensembl chr36:3,541,248...3,613,384
JBrowse link
G ACVR2A activin A receptor type 2A acts_upstream_of_or_within ISO (MGI:3689276|PMID:16991118) MGI PMID:16991118 MGI:3689276 NCBI chr19:49,642,429...49,726,720
Ensembl chr19:49,641,219...49,723,420
JBrowse link
G ACVR2B activin A receptor type 2B acts_upstream_of_or_within ISO (MGI:3689276|PMID:16991118)
(MGI:894948|PMID:9242489)
MGI PMID:9242489 PMID:16991118 MGI:3689276 MGI:894948 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894
JBrowse link
G ALG5 ALG5 dolichyl-phosphate beta-glucosyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577662|PMID:15755804) Ensembl
MGI
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr25:3,705,521...3,753,987
Ensembl chr25:3,706,423...3,753,947
JBrowse link
G ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr11:55,845,695...55,893,253
Ensembl chr11:55,847,808...55,893,257
JBrowse link
G AP1B1 adaptor related protein complex 1 subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr26:22,632,970...22,715,449
Ensembl chr26:22,630,670...22,689,996
JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641
JBrowse link
G BICC1 BicC family RNA binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 4:10,735,307...11,006,650
Ensembl chr 4:10,735,306...11,066,274
JBrowse link
G C9H9orf116 chromosome 9 C9orf116 homolog acts_upstream_of_or_within ISO (MGI:6102515|PMID:27305836) MGI PMID:27305836 MGI:6102515 NCBI chr 9:51,207,491...51,209,955
Ensembl chr 9:51,207,493...51,210,257
JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483)
(MGI:5696765|PMID:24947469)
Ensembl
MGI
PMID:24947469 PMID:25807483 GO_REF:0000107 MGI:5644076 MGI:5696765 NCBI chr 3:64,731,165...64,867,743
Ensembl chr 3:64,731,171...64,867,547
JBrowse link
G CCDC103 coiled-coil domain containing 103 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC39 coiled-coil domain containing 39 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483)
(MGI:6161988|PMID:28289722)
MGI PMID:25807483 PMID:28289722 MGI:5644076 MGI:6161988 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 acts_upstream_of_or_within ISO (MGI:5914406|PMID:28182636) MGI PMID:28182636 MGI:5914406 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) MGI PMID:25807483 MGI:5644076 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429
JBrowse link
G CFAP53 cilia and flagella associated protein 53 involved_in ISO (PMID:26531781) UniProt PMID:26531781 NCBI chr 7:78,612,226...78,649,518
Ensembl chr 7:78,597,746...78,651,472
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (MGI:3574743|PMID:15750185) UniProt PMID:15750185 MGI:3574743 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G DAAM2 dishevelled associated activator of morphogenesis 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5543845|PMID:24091014) Ensembl
MGI
PMID:24091014 GO_REF:0000107 MGI:5543845 NCBI chr12:8,686,653...8,801,903
Ensembl chr12:8,748,655...8,799,059
JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (MGI:3055649|PMID:15466485) MGI PMID:15466485 MGI:3055649 NCBI chr20:49,225,351...49,228,940
Ensembl chr20:49,225,990...49,228,940
JBrowse link
G DAW1 dynein assembly factor with WD repeats 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6161988|PMID:28289722)
(MGI:5644076|PMID:25807483)
Ensembl
MGI
PMID:25807483 PMID:28289722 GO_REF:0000107 MGI:5644076 MGI:6161988 NCBI chr25:40,548,579...40,594,286
Ensembl chr25:40,548,634...40,594,244
JBrowse link
G DISP1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO (MGI:2389012|PMID:12421714)
(MGI:3577662|PMID:15755804)
MGI PMID:12421714 PMID:15755804 MGI:2389012 MGI:3577662 NCBI chr38:23,716,436...23,871,497
Ensembl chr38:23,711,780...23,871,846
JBrowse link
G DLL1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO (MGI:2661305|PMID:12730124) MGI PMID:12730124 MGI:2661305 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DNAAF3 dynein axonemal assembly factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 1:102,468,377...102,474,615
Ensembl chr 1:102,468,629...102,475,172
JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5644076|PMID:25807483)
GO_Central
MGI
PMID:21873635 PMID:25807483 MGI:5644076 NCBI chr30:20,778,497...20,871,304
Ensembl chr30:20,815,775...20,871,220
JBrowse link
G DNAH11 dynein axonemal heavy chain 11 involved_in
acts_upstream_of_or_within
ISO (PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950)
(MGI:5644076|PMID:25807483)
(MGI:5811184|PMID:27340223)
(MGI:1099344|PMID:9353118)
(MGI:1347236|PMID:10556073)
SYSCILIA_CCNET
MGI
PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 PMID:22499950 PMID:25807483 PMID:27340223 MGI:1099344 MGI:1347236 MGI:48750 MGI:5644076 MGI:5811184 NCBI chr14:35,468,080...35,784,621
Ensembl chr14:35,468,154...35,784,806
JBrowse link
G DNAH5 dynein axonemal heavy chain 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2178772|PMID:11912187)
(MGI:5644076|PMID:25807483)
(MGI:6161988|PMID:28289722)
Ensembl
MGI
PMID:11912187 PMID:25807483 PMID:28289722 GO_REF:0000107 MGI:2178772 MGI:5644076 MGI:6161988 NCBI chr34:816,088...1,040,052
Ensembl chr34:805,455...1,038,273
JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr11:51,080,080...51,205,381
Ensembl chr11:51,106,370...51,237,467
JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,085,021...6,114,187
Ensembl chr 9:6,085,459...6,114,351
JBrowse link
G DPCD deleted in primary ciliary dyskinesia homolog involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5429171|PMID:21746835) Ensembl
MGI
PMID:21746835 GO_REF:0000107 MGI:5429171 NCBI chr28:14,201,302...14,219,121
Ensembl chr28:14,201,351...14,219,121
JBrowse link
G DRC1 dynein regulatory complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr17:20,479,290...20,517,960
Ensembl chr17:20,431,176...20,517,753
JBrowse link
G DYNC2H1 dynein cytoplasmic 2 heavy chain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3610248|PMID:16229832), (MGI:5644076|PMID:25807483)
(MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793)
Ensembl
MGI
PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 GO_REF:0000107 MGI:3577662 MGI:3588600 MGI:3610248 MGI:5644076 NCBI chr 5:28,566,604...28,727,416
Ensembl chr 5:28,388,664...28,727,334
JBrowse link
G DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3487175|PMID:15371312) Ensembl
MGI
PMID:15371312 GO_REF:0000107 MGI:3487175 NCBI chr10:46,231,433...46,270,102
Ensembl chr10:46,231,460...46,290,382
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3056270|PMID:15329346) Ensembl
MGI
PMID:15329346 GO_REF:0000107 MGI:3056270 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:1340887|PMID:10411502) MGI PMID:10411502 MGI:1340887 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2135612|PMID:11493558) Ensembl
MGI
PMID:11493558 GO_REF:0000107 MGI:2135612 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935
JBrowse link
G FOXH1 forkhead box H1 acts_upstream_of_or_within ISO (MGI:2652200|PMID:12642485) MGI PMID:12642485 MGI:2652200 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319
JBrowse link
G FOXJ1 forkhead box J1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756
JBrowse link
G GAS8 growth arrest specific 8 acts_upstream_of_or_within ISO (MGI:5789455|PMID:27472056) MGI PMID:27472056 MGI:5789455 NCBI chr 5:63,589,196...63,609,014
Ensembl chr 5:63,573,941...63,619,476
JBrowse link
G IFT140 intraflagellar transport 140 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) MGI PMID:25807483 MGI:5644076 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758
JBrowse link
G IFT172 intraflagellar transport 172 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796
JBrowse link
G IFT52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) MGI PMID:15930098 MGI:3579954 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808
JBrowse link
G IFT74 intraflagellar transport 74 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr11:45,159,124...45,242,019
Ensembl chr11:45,161,086...45,242,012
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804)
(MGI:1855904|PMID:10804177)
MGI PMID:10804177 PMID:15755804 MGI:1855904 MGI:3577662 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (MGI:1336552|PMID:10220415)
(MGI:3577662|PMID:15755804)
MGI PMID:10220415 PMID:15755804 MGI:1336552 MGI:3577662 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090
JBrowse link
G LOC607539 armadillo repeat-containing protein 4-like involved_in
acts_upstream_of_or_within
ISO (PMID:23849778)
(MGI:5644076|PMID:25807483)
(MGI:5551687|PMID:23849778)
SYSCILIA_CCNET
MGI
PMID:23849778 PMID:25807483 MGI:5551687 MGI:5644076 NCBI chr 2:4,769,681...5,037,592 JBrowse link
G LOC609557 cryptic protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5644076|PMID:25807483)
(MGI:1346729|PMID:10521397)
GO_Central
MGI
PMID:10521397 PMID:21873635 PMID:25807483 MGI:1346729 MGI:5644076 NCBI chr19:20,318,937...20,384,369 JBrowse link
G MEGF8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) MGI PMID:25807483 MGI:5644076 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773
JBrowse link
G MKS1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4868517|PMID:21045211)
(MGI:4367169|PMID:19776033)
Ensembl
MGI
PMID:19776033 PMID:21045211 GO_REF:0000107 MGI:4367169 MGI:4868517 NCBI chr 9:32,865,972...32,878,712
Ensembl chr 9:32,860,995...32,879,338
JBrowse link
G MMP21 matrix metallopeptidase 21 involved_in
acts_upstream_of_or_within
ISO (PMID:26429889), (PMID:26437028)
(MGI:5644076|PMID:25807483)
(MGI:5700258|PMID:26437028)
UniProt
MGI
PMID:25807483 PMID:26429889 PMID:26437028 MGI:5644076 MGI:5700258 NCBI chr28:34,936,976...34,944,110
Ensembl chr28:34,935,186...34,944,316
JBrowse link
G NEK8 NIMA related kinase 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 9:42,923,208...42,933,083
Ensembl chr 9:42,923,288...42,932,352
JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3056270|PMID:15329346) Ensembl
MGI
PMID:15329346 GO_REF:0000107 MGI:3056270 NCBI chr 3:66,543,046...66,546,779
Ensembl chr 3:66,543,046...66,545,580
JBrowse link
G NME7 NME/NM23 family member 7 acts_upstream_of_or_within ISO (MGI:5429171|PMID:21746835) MGI PMID:21746835 MGI:5429171 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:5914406|PMID:28182636)
(MGI:3055649|PMID:15466485)
(MGI:2155575|PMID:11311163)
(MGI:3624254|PMID:16496285)
(MGI:2387223|PMID:12231623)
(MGI:2652200|PMID:12642485), (MGI:2654412|PMID:12654299)
MGI PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 PMID:16496285 PMID:28182636 MGI:2155575 MGI:2387223 MGI:2652200 MGI:2654412 MGI:3055649 MGI:3624254 MGI:5914406 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G NOTCH1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:2661305|PMID:12730124)
(MGI:72973|PMID:7789282)
MGI PMID:7789282 PMID:12730124 MGI:2661305 MGI:72973 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within ISO (MGI:2661305|PMID:12730124) MGI PMID:12730124 MGI:2661305 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857
JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within ISO (MGI:5014029|PMID:20350929)
(MGI:5316531|PMID:22357932), (MGI:5646191|PMID:17884984)
MGI PMID:17884984 PMID:20350929 PMID:22357932 MGI:5014029 MGI:5316531 MGI:5646191
G NPHP3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr20:49,917,183...49,926,417
Ensembl chr20:49,917,350...49,926,424
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 1:82,088,090...82,506,131
Ensembl chr 1:82,090,664...82,555,145
JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1858546|PMID:10809672) Ensembl
MGI
PMID:10809672 GO_REF:0000107 MGI:1858546 NCBI chr 3:39,582,804...39,768,838
Ensembl chr 3:39,582,819...39,767,929
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within
involved_in
ISO (MGI:1345532|PMID:10499586)
(MGI:1344731|PMID:10498698)
(MGI:2389284|PMID:12397115)
(MGI:1277589|PMID:9708732)
(MGI:2135655|PMID:11493526), (MGI:5543845|PMID:24091014)
(MGI:1347482|PMID:10572050)
MGI
BHF-UCL
PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 PMID:12397115 PMID:24091014 MGI:1277589 MGI:1344731 MGI:1345532 MGI:1347482 MGI:2135655 MGI:2389284 MGI:5543845 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273
JBrowse link
G PKD1L1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) MGI PMID:25807483 MGI:5644076 NCBI chr16:119,639...199,418 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO (MGI:2181535|PMID:12062060) MGI PMID:12062060 MGI:2181535 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G PSKH1 protein serine kinase H1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 5:81,567,665...81,596,382
Ensembl chr 5:81,569,624...81,584,477
JBrowse link
G RFX3 regulatory factor X3 acts_upstream_of_or_within ISO (MGI:3041887|PMID:15121860) MGI PMID:15121860 MGI:3041887 NCBI chr 1:91,773,492...92,060,895
Ensembl chr 1:91,778,481...92,059,792
JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:3715395|PMID:17531978) MGI PMID:17531978 MGI:3715395 NCBI chr12:44,144,821...44,168,236 JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3715393|PMID:17553904) Ensembl
MGI
PMID:17553904 GO_REF:0000107 MGI:3715393 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284
JBrowse link
G RTTN rotatin acts_upstream_of_or_within ISO (MGI:2178890|PMID:11900971) MGI PMID:11900971 MGI:2178890 NCBI chr 1:8,180,831...8,326,947
Ensembl chr 1:8,180,888...8,323,346
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1339521|PMID:10385121), (MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184) MGI PMID:10385121 PMID:10411502 PMID:10500184 MGI:1339521 MGI:1340887 MGI:1346236 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804)
(MGI:2389012|PMID:12421714)
MGI PMID:12421714 PMID:15755804 MGI:2389012 MGI:3577662 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (MGI:1339521|PMID:10385121) MGI PMID:10385121 MGI:1339521 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (MGI:3604917|PMID:16155214) MGI PMID:16155214 MGI:3604917 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644076|PMID:25807483) Ensembl
MGI
PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 1:60,662,704...60,873,881
Ensembl chr 1:60,667,721...60,873,614
JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3621085|PMID:16556915) UniProt
MGI
PMID:16556915 GO_REF:0000024 MGI:3621085 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:3629366|PMID:16705179) MGI PMID:16705179 MGI:3629366 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912
JBrowse link
G TMEM107 transmembrane protein 107 acts_upstream_of_or_within ISO (MGI:6405644|PMID:31887266) MGI PMID:31887266 MGI:6405644 NCBI chr 5:32,991,000...32,993,319
Ensembl chr 5:32,991,021...32,993,248
JBrowse link
G TMEM67 transmembrane protein 67 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) MGI PMID:25807483 MGI:5644076 NCBI chr29:38,655,531...38,715,774
Ensembl chr29:38,654,733...38,720,559
JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3611726|PMID:16291790) MGI PMID:16291790 MGI:3611726 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within ISO (MGI:5543845|PMID:24091014) MGI PMID:24091014 MGI:5543845 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within
ISO (PMID:9354794)
(MGI:3624254|PMID:16496285)
(MGI:3056222|PMID:15384171)
BHF-UCL
MGI
PMID:9354794 PMID:15384171 PMID:16496285 MGI:3056222 MGI:3624254 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain containing 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G NPHP3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain containing 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G NPHP3 nephrocystin 3 involved_in ISO (PMID:20007846) BHF-UCL PMID:20007846 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPHP3 nephrocystin 3 involved_in ISO (PMID:18371931) BHF-UCL PMID:18371931 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
determination of ventral identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIDA axin interactor, dorsalization associated involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:16,938,279...16,971,200
Ensembl chr38:16,939,556...16,971,200
JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain containing 39 involved_in IBA
IEA
IMP
(PMID:21873635)
(PMID:21131972)
GO_Central
Ensembl
UniProt
PMID:21131972 PMID:21873635 GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G CFAP45 cilia and flagella associated protein 45 acts_upstream_of_or_within ISO (MGI:6479264|PMID:33139725) MGI PMID:33139725 MGI:6479264 NCBI chr38:22,245,879...22,269,363
Ensembl chr38:22,254,472...22,269,322
JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6147712|PMID:27353389) Ensembl
MGI
PMID:27353389 GO_REF:0000107 MGI:6147712 NCBI chr13:29,128,500...29,199,354
Ensembl chr13:29,128,504...29,199,323
JBrowse link
G DNAH11 dynein axonemal heavy chain 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3629280|PMID:10549278), (MGI:5913669|PMID:22102620) Ensembl
MGI
PMID:10549278 PMID:22102620 GO_REF:0000107 MGI:3629280 MGI:5913669 NCBI chr14:35,468,080...35,784,621
Ensembl chr14:35,468,154...35,784,806
JBrowse link
G INVS inversin acts_upstream_of_or_within ISO (MGI:3629280|PMID:10549278) MGI PMID:10549278 MGI:3629280 NCBI chr11:57,040,005...57,196,465
Ensembl chr11:57,040,070...57,195,281
JBrowse link
G MEGF8 multiple EGF like domains 8 NOT|acts_upstream_of_or_within ISO (MGI:3839019|PMID:18043505) MGI PMID:18043505 MGI:3839019 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773
JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO (MGI:6360364|PMID:31383820) MGI PMID:31383820 MGI:6360364 NCBI chr20:49,917,183...49,926,417
Ensembl chr20:49,917,350...49,926,424
JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5913140|PMID:27486780) Ensembl
MGI
PMID:27486780 GO_REF:0000107 MGI:5913140 NCBI chr 9:20,897,814...20,921,182
Ensembl chr 9:20,897,976...20,921,441
JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in ISO (MGI:3617259|PMID:16311594) UniProt PMID:16311594 MGI:3617259 NCBI chr  X:10,140,439...10,194,478
Ensembl chr  X:10,140,067...10,194,472
JBrowse link
G RFX3 regulatory factor X3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:91,773,492...92,060,895
Ensembl chr 1:91,778,481...92,059,792
JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain containing 39 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6111002|PMID:29317443) Ensembl
MGI
PMID:29317443 GO_REF:0000107 MGI:6111002 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G ENKUR enkurin, TRPC channel interacting protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6110984|PMID:29257953) Ensembl
MGI
PMID:29257953 GO_REF:0000107 MGI:6110984 NCBI chr 2:8,497,252...8,522,302
Ensembl chr 2:8,497,726...8,522,294
JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit acts_upstream_of_or_within ISO (MGI:6358908|PMID:31107948)
(MGI:5514194|PMID:23525783)
MGI PMID:23525783 PMID:31107948 MGI:5514194 MGI:6358908 NCBI chr 8:26,264,220...26,295,089
Ensembl chr 8:26,251,160...26,295,317
JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351
JBrowse link
G APLNR apelin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:38,878,621...38,882,280
Ensembl chr18:38,878,947...38,886,206
JBrowse link
G ARL13B ADP ribosylation factor like GTPase 13B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5430243|PMID:22554696) Ensembl
MGI
PMID:22554696 GO_REF:0000107 MGI:5430243 NCBI chr33:1,698,360...1,762,846
Ensembl chr33:1,698,363...1,761,641
JBrowse link
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657
JBrowse link
G CCDC103 coiled-coil domain containing 103 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,581,544...18,585,939
Ensembl chr 9:18,582,468...18,584,612
JBrowse link
G CCDC39 coiled-coil domain containing 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,915,763...13,959,574
Ensembl chr34:13,905,434...13,959,340
JBrowse link
G CCDC40 coiled-coil domain containing 40 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:1,616,029...1,656,043
Ensembl chr 9:1,601,121...1,656,597
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3574743|PMID:15750185) Ensembl
MGI
PMID:15750185 GO_REF:0000107 MGI:3574743 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within ISO (MGI:5509110|PMID:23742838) MGI PMID:23742838 MGI:5509110 NCBI chr 6:37,708,258...37,746,361
Ensembl chr 6:37,708,089...37,746,398
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:68,184,532...68,205,651
Ensembl chr 5:68,184,532...68,205,656
JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G EOMES eomesodermin involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:16,476,498...16,512,406
Ensembl chr23:16,506,032...16,511,527
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1340887|PMID:10411502) Ensembl
MGI
PMID:10411502 GO_REF:0000107 MGI:1340887 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FOXH1 forkhead box H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319
JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO (MGI:3052615|PMID:15310850) BHF-UCL PMID:15310850 MGI:3052615 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:1201220|PMID:9486664) MGI PMID:9486664 MGI:1201220 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936
JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1197800|PMID:9500551) Ensembl
MGI
PMID:9500551 GO_REF:0000107 MGI:1197800 NCBI chr 4:55,231,061...55,234,640
Ensembl chr 4:55,231,481...55,234,265
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:892134|PMID:9171826) Ensembl
MGI
PMID:9171826 GO_REF:0000107 MGI:892134 NCBI chr25:24,140,496...24,143,143
Ensembl chr25:24,141,243...24,152,958
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3607736|PMID:14659802) Ensembl
MGI
PMID:14659802 GO_REF:0000107 MGI:3607736 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828200|PMID:18930042) Ensembl
MGI
PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796
JBrowse link
G IFT52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3579954|PMID:15930098) Ensembl
MGI
PMID:15930098 GO_REF:0000107 MGI:3579954 NCBI chr24:31,295,987...31,334,825
Ensembl chr24:31,296,015...31,334,808
JBrowse link
G IFT57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703110|PMID:17027958) Ensembl
MGI
PMID:17027958 GO_REF:0000107 MGI:3703110 NCBI chr33:13,432,902...13,486,692
Ensembl chr33:13,410,544...13,486,612
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) BHF-UCL PMID:11517919 MGI:5142377 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127
JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (MGI:1337724|PMID:10330409) MGI PMID:10330409 MGI:1337724 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090
JBrowse link
G LBX1 ladybird homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628723|PMID:12522123) Ensembl
MGI
PMID:12522123 GO_REF:0000107 MGI:3628723 NCBI chr28:13,872,846...13,875,521
Ensembl chr28:13,873,727...13,875,486
JBrowse link
G LOC609557 cryptic protein acts_upstream_of_or_within ISO (MGI:1346729|PMID:10521397) MGI PMID:10521397 MGI:1346729 NCBI chr19:20,318,937...20,384,369 JBrowse link
G LOC609612 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:25,944,350...25,951,010 JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755
JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603078|PMID:16000382) Ensembl
MGI
PMID:16000382 GO_REF:0000107 MGI:3603078 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491
JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74918|PMID:7628699), (MGI:892786|PMID:9192865)
(MGI:3773736|PMID:16510504)
Ensembl
MGI
PMID:7628699 PMID:9192865 PMID:16510504 GO_REF:0000107 MGI:3773736 MGI:74918 MGI:892786 NCBI chr 4:39,240,755...39,254,585
Ensembl chr 4:39,244,286...39,247,592
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624254|PMID:16496285) Ensembl
MGI
PMID:16496285 GO_REF:0000107 MGI:3624254 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857
JBrowse link
G NOTO notochord homeobox acts_upstream_of_or_within ISO (MGI:5646191|PMID:17884984) MGI PMID:17884984 MGI:5646191
G NPHP3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) BHF-UCL PMID:18371931 PMID:20007846 NCBI chr23:29,662,486...29,703,629
Ensembl chr23:29,645,641...29,703,805
JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3776202|PMID:17573777) Ensembl
MGI
PMID:17573777 GO_REF:0000107 MGI:3776202 NCBI chr24:5,020,608...5,050,487
Ensembl chr24:5,020,813...5,050,309
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1347695|PMID:10557208) Ensembl
MGI
PMID:10557208 GO_REF:0000107 MGI:1347695 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184) Ensembl
MGI
PMID:10411502 PMID:10500184 GO_REF:0000107 MGI:1340887 MGI:1346236 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3618021|PMID:15183723) Ensembl
MGI
PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337
JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3716256|PMID:17610846) Ensembl
MGI
PMID:17610846 GO_REF:0000107 MGI:3716256 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603734|PMID:15929941) Ensembl
MGI
PMID:15929941 GO_REF:0000107 MGI:3603734 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G STIL STIL centriolar assembly protein acts_upstream_of_or_within ISO (MGI:1339521|PMID:10385121) MGI PMID:10385121 MGI:1339521 NCBI chr15:13,369,292...13,431,677
Ensembl chr15:13,371,925...13,430,951
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604917|PMID:16155214) Ensembl
MGI
PMID:16155214 GO_REF:0000107 MGI:3604917 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900
JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736
JBrowse link
G TBX20 T-box transcription factor 20 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3578601|PMID:15843407)
(MGI:3579960|PMID:15901664)
GO_Central
MGI
PMID:15843407 PMID:15901664 PMID:21873635 MGI:3578601 MGI:3579960 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507
JBrowse link
G TBX21 T-box transcription factor 21 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:24,077,752...24,086,560
Ensembl chr 9:24,077,761...24,086,261
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:3769096|PMID:17460765)
(MGI:4412356|PMID:18723448)
(PMID:21873635)
Ensembl
MGI
GO_Central
PMID:17460765 PMID:18723448 PMID:21873635 GO_REF:0000107 MGI:3769096 MGI:4412356 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
G TBX6 T-box transcription factor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (MGI:4453264|PMID:20178780) MGI PMID:20178780 MGI:4453264 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459
JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (MGI:2157686|PMID:11440971) UniProt PMID:11440971 MGI:2157686 NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611726|PMID:16291790) Ensembl
MGI
PMID:16291790 GO_REF:0000107 MGI:3611726 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4413372|PMID:19795512) Ensembl
MGI
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624254|PMID:16496285)
(MGI:3056222|PMID:15384171)
Ensembl
MGI
PMID:15384171 PMID:16496285 GO_REF:0000107 MGI:3056222 MGI:3624254 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
negative regulation of determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDIT3 DNA damage inducible transcript 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,606,693...1,612,410
Ensembl chr10:1,606,693...1,611,303
JBrowse link
G SOSTDC1 sclerostin domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:31,035,759...31,079,139
Ensembl chr14:31,022,766...31,026,737
Ensembl chr14:31,022,766...31,026,737
JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736
JBrowse link
negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CER1 cerberus 1, DAN family BMP antagonist involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942
JBrowse link
G DAND5 DAN domain BMP antagonist family member 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:49,225,351...49,228,940
Ensembl chr20:49,225,990...49,228,940
JBrowse link
nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G NODAL nodal growth differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
positive regulation of determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3797993|PMID:18316368) Ensembl
MGI
PMID:18316368 GO_REF:0000107 MGI:3797993 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (MGI:3797993|PMID:18316368) MGI PMID:18316368 MGI:3797993 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983
JBrowse link
G ZIC2 Zic family member 2 acts_upstream_of_or_within ISO (MGI:5584215|PMID:24585447) MGI PMID:24585447 MGI:5584215 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055
JBrowse link
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16215
    multicellular organismal process 7665
      pattern specification process 482
        specification of symmetry 139
          determination of bilateral symmetry + 138
          determination of radial symmetry 0
          specification of ureteric bud anterior/posterior symmetry + 1
Path 2
Term Annotations click to browse term
  biological_process 16215
    developmental process 6377
      anatomical structure development 5910
        multicellular organism development 5376
          pattern specification process 482
            specification of symmetry 139
              determination of bilateral symmetry + 138
              determination of radial symmetry 0
              specification of ureteric bud anterior/posterior symmetry + 1
paths to the root