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ONTOLOGY REPORT - ANNOTATIONS

Term:catechol-containing compound biosynthetic process
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Accession:GO:0009713 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.
Synonyms:related_synonym: catechol anabolism;   catechol biosynthesis;   catechol biosynthetic process;   catechol formation;   catechol synthesis

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catecholamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:17194738 RGD:5131263 NCBI chrNW_004936478:6,901,098...6,947,719
Ensembl chrNW_004936478:6,899,017...6,947,790 		JBrowse link
G Ddc dopa decarboxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
G Hdc histidine decarboxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936471:12,303,802...12,324,613
Ensembl chrNW_004936471:12,304,130...12,324,570 		JBrowse link
G Th tyrosine hydroxylase involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:20025246 GO_REF:0000002 GO_REF:0000043 RGD:4139888 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:20097214 RGD:6903884 NCBI chrNW_004936519:6,831,096...6,873,977
Ensembl chrNW_004936519:6,831,096...6,873,985 		JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:20097214 RGD:6903884 NCBI chrNW_004936479:13,252,678...13,255,570
Ensembl chrNW_004936479:13,252,678...13,255,570 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit ISO RGD PMID:12438507 RGD:704388 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246 		JBrowse link
G Dao D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12703659 RGD:4139893 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:16338639) UniProt PMID:16338639 NCBI chrNW_004936697:232,048...275,420 JBrowse link
G Gpr37 G protein-coupled receptor 37 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3046856|PMID:15218106) MGI
Ensembl		 PMID:15218106 GO_REF:0000107 MGI:3046856 NCBI chrNW_004936605:978,174...997,093
Ensembl chrNW_004936605:978,980...999,741 		JBrowse link
G LOC101961588 cytochrome P450 2D17 ISO RGD PMID:19818757 RGD:5143981 NCBI chrNW_004936718:153,340...157,966 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1203924|PMID:9608532), (MGI:3767764|PMID:16782508) MGI
Ensembl		 PMID:9608532 PMID:16782508 GO_REF:0000107 MGI:1203924 MGI:3767764 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2386819|PMID:9520487) MGI
Ensembl		 PMID:9520487 GO_REF:0000107 MGI:2386819 NCBI chrNW_004936815:359,775...400,690
Ensembl chrNW_004936815:359,775...400,690 		JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1352916|PMID:10707987) MGI
Ensembl		 PMID:10707987 GO_REF:0000107 MGI:1352916 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:3622848|PMID:16257223) UniProt PMID:16257223 MGI:3622848 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007 		JBrowse link
G Th tyrosine hydroxylase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:2386819|PMID:9520487)
(MGI:72094|PMID:7715703), (MGI:77787|PMID:7592982)		 RGD
Ensembl
MGI		 PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:19584816 GO_REF:0000107 MGI:2386819 MGI:72094 MGI:77787 RGD:1580046 RGD:5130972 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
epinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:7914070 RGD:4139902 NCBI chrNW_004936490:14,858,682...14,861,614
Ensembl chrNW_004936490:14,858,603...14,865,321 		JBrowse link
G Th tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
norepinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:53940|PMID:4858102)
(MGI:53801|PMID:4405722)		 MGI PMID:4405722 PMID:4858102 MGI:53801 MGI:53940 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Dbh dopamine beta-hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:1203930|PMID:9603211), (MGI:1332340|PMID:10051631) RGD
Ensembl
UniProt
MGI		 PMID:9603211 PMID:10051631 PMID:10573542 GO_REF:0000041 GO_REF:0000107 MGI:1203930 MGI:1332340 RGD:1625403 NCBI chrNW_004936669:3,302,014...3,326,233
Ensembl chrNW_004936669:3,301,802...3,320,643 		JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:19457096 RGD:5128877 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1859081|PMID:10835639) MGI
Ensembl		 PMID:10835639 GO_REF:0000107 MGI:1859081 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (MGI:4413411|PMID:19008477) Ensembl
BHF-UCL		 PMID:19008477 GO_REF:0000107 MGI:4413411 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632 		JBrowse link
G Insm1 INSM transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:66,889...69,792
Ensembl chrNW_004936485:68,004...69,596 		JBrowse link
G Kl klotho ISO RGD PMID:20086041 RGD:10403068 NCBI chrNW_004936472:27,604,681...27,649,613
Ensembl chrNW_004936472:27,604,517...27,650,086 		JBrowse link
G Th tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:478,651...486,887
Ensembl chrNW_004936794:478,614...487,061 		JBrowse link
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:19457096 RGD:5128877 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:50,476...77,797
Ensembl chrNW_004936475:50,321...78,097 		JBrowse link
regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh2 aldehyde dehydrogenase 2 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:4,362,693...4,387,705
Ensembl chrNW_004936558:4,362,654...4,390,414 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15101
    metabolic process 9052
      cellular metabolic process 7849
        cellular aromatic compound metabolic process 4592
          phenol-containing compound metabolic process 120
            catechol-containing compound metabolic process 61
              catechol-containing compound biosynthetic process 26
                (R)-mandelate catabolic process to catechol 0
                3,4-dihydroxybenzoate biosynthetic process 0
                3-(2,3-dihydroxyphenyl)propanoate biosynthetic process 0
                3-chlorocatechol biosynthetic process 0
                alkyl caffeate ester biosynthetic process 0
                catechol-containing siderophore biosynthetic process + 0
                catecholamine biosynthetic process + 26
                chrysobactin biosynthetic process 0
                cordyol C biosynthetic process + 0
                gerfelin biosynthetic process + 0
                methylgallate biosynthetic process 0
                violaceol I biosynthetic process + 0
                violaceol II biosynthetic process + 0
paths to the root