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ONTOLOGY REPORT - ANNOTATIONS

Term:catechol-containing compound biosynthetic process
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Accession:GO:0009713 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.
Synonyms:related_synonym: catechol anabolism;   catechol biosynthesis;   catechol biosynthetic process;   catechol formation;   catechol synthesis


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catecholamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:17194738 RGD:5131263 NCBI chr18:42,251,755...42,296,457
Ensembl chr18:42,251,749...42,295,467 		JBrowse link
G DDC dopa decarboxylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G FIGNL1 fidgetin like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:136,484,217...136,488,262
Ensembl chr 9:136,484,216...136,488,250 		JBrowse link
G HDC histidine decarboxylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:121,505,677...121,525,416
Ensembl chr 1:121,505,751...121,525,252 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:22,648,396...22,651,520
Ensembl chr12:22,648,398...22,649,999 		JBrowse link
G TH tyrosine hydroxylase involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:20025246 GO_REF:0000002 GO_REF:0000043 RGD:4139888 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:20097214 RGD:6903884 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:20097214 RGD:6903884 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388 		JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit ISO RGD PMID:12438507 RGD:704388 NCBI chr 1:142,803,697...142,937,124
Ensembl chr 1:142,803,701...142,937,123 		JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 ISO RGD PMID:19818757 RGD:5143981 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,642 		JBrowse link
G DAO D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
G DDC dopa decarboxylase involved_in ISO
IEA		 RGD
UniProt		 PMID:12703659 GO_REF:0000041 RGD:4139893 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G GCH1 GTP cyclohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:184,201,232...184,264,060
Ensembl chr 1:184,199,679...184,257,315 		JBrowse link
G GPR37 G protein-coupled receptor 37 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3046856|PMID:15218106) MGI
Ensembl		 PMID:15218106 GO_REF:0000107 MGI:3046856 NCBI chr18:23,019,752...23,036,483
Ensembl chr18:23,019,749...23,038,356 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1203924|PMID:9608532), (MGI:3767764|PMID:16782508) MGI
Ensembl		 PMID:9608532 PMID:16782508 GO_REF:0000107 MGI:1203924 MGI:3767764 NCBI chr15:63,487,051...63,506,249
Ensembl chr15:63,487,731...63,495,299 		JBrowse link
G SLC6A3 solute carrier family 6 member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2386819|PMID:9520487) MGI
Ensembl		 PMID:9520487 GO_REF:0000107 MGI:2386819 NCBI chr16:79,186,114...79,220,302
Ensembl chr16:79,186,108...79,220,297 		JBrowse link
G SNCA synuclein alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1352916|PMID:10707987) MGI
Ensembl		 PMID:10707987 GO_REF:0000107 MGI:1352916 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
dopamine biosynthetic process from tyrosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TH tyrosine hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:21873635)
(MGI:2386819|PMID:9520487)
(MGI:72094|PMID:7715703), (MGI:77787|PMID:7592982)		 RGD
GO_Central
Ensembl
MGI		 PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:19584816 More... GO_REF:0000107 MGI:2386819 MGI:72094 MGI:77787 RGD:1580046 RGD:5130972 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
epinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNMT phenylethanolamine N-methyltransferase involved_in ISO
IEA		 RGD
UniProt		 PMID:7914070 GO_REF:0000041 RGD:4139902 NCBI chr12:22,648,396...22,651,520
Ensembl chr12:22,648,398...22,649,999 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
norepinephrine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:53801|PMID:4405722)
(MGI:53940|PMID:4858102)		 MGI PMID:4405722 PMID:4858102 MGI:53801 MGI:53940 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G DBH dopamine beta-hydroxylase involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:21873635)
(MGI:1203930|PMID:9603211), (MGI:1332340|PMID:10051631)		 RGD
Ensembl
UniProt
GO_Central
MGI		 PMID:9603211 PMID:10051631 PMID:10573542 PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:1203930 MGI:1332340 RGD:1625403 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,175...273,225,552 		JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:19457096 RGD:5128877 NCBI chr 3:94,167,759...94,253,662
Ensembl chr 3:94,165,816...94,254,079 		JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within
involved_in		 ISO
ISS
IEA		 (MGI:1859081|PMID:10835639) MGI
UniProt
Ensembl		 PMID:10835639 GO_REF:0000024 GO_REF:0000107 MGI:1859081 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (MGI:4413411|PMID:19008477) Ensembl
BHF-UCL		 PMID:19008477 GO_REF:0000107 MGI:4413411 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,459,971...16,462,207 		JBrowse link
G INSM1 INSM transcriptional repressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,379,529...28,382,554
Ensembl chr17:28,379,880...28,381,427 		JBrowse link
G KL klotho ISO RGD PMID:20086041 RGD:10403068 NCBI chr11:9,427,236...9,479,251
Ensembl chr11:9,427,037...9,479,228 		JBrowse link
G MOXD1 monooxygenase DBH like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:31,282,491...31,367,589
Ensembl chr 1:31,282,506...31,367,779 		JBrowse link
G MOXD2 monooxygenase DBH like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:7,742,254...7,751,098 JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:19457096 RGD:5128877 NCBI chr 3:94,167,759...94,253,662
Ensembl chr 3:94,165,816...94,254,079 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,516 		JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chr 6:37,944,099...37,977,091
Ensembl chr 6:37,944,127...37,986,171 		JBrowse link
regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH2 aldehyde dehydrogenase 2 family member involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:39,902,317...39,933,113
Ensembl chr14:39,896,565...39,933,124 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17410
    metabolic process 10284
      cellular metabolic process 9000
        cellular aromatic compound metabolic process 5207
          phenol-containing compound metabolic process 128
            catechol-containing compound metabolic process 63
              catechol-containing compound biosynthetic process 29
                (R)-mandelate catabolic process to catechol 0
                3,4-dihydroxybenzoate biosynthetic process 0
                3-(2,3-dihydroxyphenyl)propanoate biosynthetic process 0
                3-chlorocatechol biosynthetic process 0
                alkyl caffeate ester biosynthetic process 0
                catechol-containing siderophore biosynthetic process + 0
                catecholamine biosynthetic process + 29
                chrysobactin biosynthetic process 0
                cordyol C biosynthetic process + 0
                gerfelin biosynthetic process + 0
                methylgallate biosynthetic process 0
                violaceol I biosynthetic process + 0
                violaceol II biosynthetic process + 0
paths to the root