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ONTOLOGY REPORT - ANNOTATIONS


Term:phenylpropanoid metabolic process
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Accession:GO:0009698 term browser browse the term
Definition:The chemical reactions and pathways involving aromatic derivatives of trans-cinnamic acid.
Synonyms:exact_synonym: phenylpropanoid metabolism
 xref: MetaCyc:PWY1F-467


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coumarin catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:30,311,981...30,338,679
Ensembl chr 4:30,311,982...30,338,679
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C IDA RGD PMID:15502008 RGD:2317077 NCBI chr 9:95,233,957...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt1a8 UDP glucuronosyltransferase family 1 member A8 IDA RGD PMID:15502008 RGD:2317077 NCBI chr 9:95,221,474...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
coumarin metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA Coumarin derivative metabolism RGD PMID:11780761 RGD:2306676 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Cyp2a1 cytochrome P450, family 2, subfamily a, polypeptide 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12162851, PMID:21873635 RGD:727640, RGD:13792537 NCBI chr 1:83,711,223...83,725,222
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Cyp2a2 cytochrome P450, family 2, subfamily a, polypeptide 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,744,229...83,766,490
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,653,248...83,662,118
Ensembl chr 1:83,653,234...83,766,484
JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 ISO (PMID:19438707) RGD PMID:19438707 NCBI chr 7:123,599,264...123,608,436
Ensembl chr 7:123,599,266...123,608,436
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      secondary metabolic process 61
        phenylpropanoid metabolic process 8
          chalcone metabolic process + 0
          cinnamic acid ester metabolic process + 0
          cinnamic acid metabolic process + 0
          coumarin metabolic process + 8
          eugenol metabolic process + 0
          isoflavonoid metabolic process + 0
          leucoanthocyanidin metabolic process + 0
          lignan metabolic process + 0
          lignin metabolic process + 0
          phenylpropanoid biosynthetic process + 0
          phenylpropanoid catabolic process + 3
          regulation of phenylpropanoid metabolic process + 0
          sinapate ester metabolic process + 0
          sinapate metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        cellular aromatic compound metabolic process 5708
          phenylpropanoid metabolic process 8
            chalcone metabolic process + 0
            cinnamic acid ester metabolic process + 0
            cinnamic acid metabolic process + 0
            coumarin metabolic process + 8
            eugenol metabolic process + 0
            isoflavonoid metabolic process + 0
            leucoanthocyanidin metabolic process + 0
            lignan metabolic process + 0
            lignin metabolic process + 0
            phenylpropanoid biosynthetic process + 0
            phenylpropanoid catabolic process + 3
            regulation of phenylpropanoid metabolic process + 0
            sinapate ester metabolic process + 0
            sinapate metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.