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ONTOLOGY REPORT - ANNOTATIONS


Term:response to light intensity
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Accession:GO:0009642 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus.



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response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cat catalase IEP RGD PMID:17514533 RGD:9107626 NCBI chr 3:89,842,393...89,874,577
Ensembl chr 3:89,842,399...89,874,478
JBrowse link
G Cntf ciliary neurotrophic factor IEP RGD PMID:21076359 RGD:8655612 NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:5750095 (MGI:6503588|PMID:32889171) RGD PMID:32889171 MGI:6503588 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5315031|PMID:22411800) RGD PMID:22411800 MGI:5315031 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 IDA RGD PMID:17591908 RGD:2302146 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866
JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744
JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 IEP RGD PMID:18708127 RGD:9685740 NCBI chr 7:47,700,035...47,883,979
Ensembl chr 7:47,700,288...47,883,968
JBrowse link
G Mt-nd3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 IEP RGD PMID:15277468 RGD:2302310 NCBI chr MT:9,451...9,798
Ensembl chr MT:9,451...9,798
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO MGI:3586379 (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252
JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within ISO MGI:3056058 (MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:3055638 NCBI chr  X:33,963,657...33,992,115
Ensembl chr  X:33,963,657...33,992,115
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 acts_upstream_of_or_within ISO MGI:2158456 (MGI:3695811|PMID:17202487) RGD PMID:17202487 MGI:3695811 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
JBrowse link
G Slc24a2 solute carrier family 24 member 2 involved_in ISO (MGI:6116933|PMID:28650316) RGD PMID:28650316 MGI:6116933 NCBI chr 5:101,499,536...101,739,337
Ensembl chr 5:101,502,278...101,739,337
JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:6116933|PMID:28650316) RGD PMID:28650316 MGI:6116933 NCBI chr 6:121,278,746...121,419,811
Ensembl chr 6:121,280,031...121,414,949
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5507748|PMID:23555598)
GO_REF:0000107
RGD
Ensembl
PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chr 8:76,076,227...76,104,151
Ensembl chr 8:76,073,306...76,105,069
JBrowse link
G Rgs9 regulator of G-protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) RGD PMID:23555598 MGI:5507748 NCBI chr10:94,195,265...94,270,892
Ensembl chr10:94,197,054...94,270,892
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:23700402 RGD:11041783 NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
JBrowse link
light adaption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5507748|PMID:23555598)
GO_REF:0000107
RGD
Ensembl
PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chr 8:76,076,227...76,104,151
Ensembl chr 8:76,073,306...76,105,069
JBrowse link
G Rgs9 regulator of G-protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) RGD PMID:23555598 MGI:5507748 NCBI chr10:94,195,265...94,270,892
Ensembl chr10:94,197,054...94,270,892
JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:17854381 RGD:8547925 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Rdh13 retinol dehydrogenase 13 acts_upstream_of_or_within ISO MGI:5467544 (MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:5462166 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908
JBrowse link
G Scn11a sodium voltage-gated channel alpha subunit 11 involved_in ISO
IEA
MGI:5608917 (MGI:6362506|PMID:31534133)
GO_REF:0000107
RGD
Ensembl
PMID:31534133 GO_REF:0000107 MGI:6362506 NCBI chr 8:119,495,550...119,567,044
Ensembl chr 8:119,496,769...119,567,044
JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:1683769 RGD:2326143 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100
JBrowse link
G Prph2 peripherin 2 IEP RGD PMID:8320859 RGD:8553226 NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19896
    response to stimulus 10568
      response to abiotic stimulus 1590
        response to radiation 559
          response to light stimulus 371
            response to light intensity 23
              background adaptation + 0
              cellular response to light intensity + 6
              light adaption + 4
              photosynthetic acclimation 0
              response to absence of light + 3
              response to high light intensity + 6
              response to low light intensity stimulus + 2
              response to very low light intensity stimulus + 0
paths to the root