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ONTOLOGY REPORT - ANNOTATIONS


Term:response to biotic stimulus
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Accession:GO:0009607 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:synonym: Not4Curation
 narrow_synonym: response to biotic stress



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activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIM2 absent in melanoma 2 involved_in IBA
IDA
IEA
(PMID:21873635)
(PMID:19158675), (PMID:19158676), (PMID:19158679)
GO_Central
GO_Central
UniProt
InterPro
Ensembl
InterPro
UniProt
PMID:19158675 PMID:19158676 PMID:19158679 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:159,055,051...159,147,132
Ensembl chr 1:159,061,599...159,187,843
JBrowse link
G CASP6 caspase 6 involved_in IDA (PMID:32298652) UniProt
UniProt
PMID:32298652 NCBI chr 4:109,664,388...109,709,767
Ensembl chr 4:109,688,622...109,703,583
JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IMP
IEA
IBA
IDA
(PMID:23258413)
(PMID:21873635)
(PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:29426904), (PMID:30007416), (PMID:32817552), (PMID:32911482), (PMID:32912999), (PMID:33542149)
UniProt
UniProt
Ensembl
GO_Central
GO_Central
PMID:21873635 PMID:23258413 PMID:23929945 PMID:24077100 PMID:26046437 More... GO_REF:0000107 NCBI chr 6:73,423,711...73,452,297
Ensembl chr 6:73,413,515...73,452,297
JBrowse link
G HEXIM1 HEXIM P-TEFb complex subunit 1 involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr17:45,148,475...45,152,099
Ensembl chr17:45,148,475...45,152,099
JBrowse link
G HMGB1 high mobility group box 1 involved_in IDA (PMID:24971542) UniProt
UniProt
PMID:24971542 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in IDA (PMID:20628368) UniProt
UniProt
PMID:20628368 NCBI chr14:102,080,742...102,139,749
Ensembl chr14:102,080,742...102,139,699
JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in IDA
IEA
IBA
(PMID:21575908)
(PMID:21873635)
UniProt
InterPro
UniProt
GO_Central
InterPro
GO_Central
PMID:21575908 PMID:21873635 GO_REF:0000002 NCBI chr 1:158,999,976...159,055,151
Ensembl chr 1:158,999,968...159,055,155
JBrowse link
G MATR3 matrin 3 involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr 5:139,274,101...139,331,677
Ensembl chr 5:139,273,752...139,331,671
Ensembl chr 5:139,273,752...139,331,671
JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IDA
IMP
(PMID:20628368)
(PMID:18818105)
UniProt
UniProt
BHF-UCL
BHF-UCL
PMID:18818105 PMID:20628368 NCBI chr20:3,846,834...3,876,118
Ensembl chr20:3,846,799...3,876,123
JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 1:158,831,351...158,849,502
Ensembl chr 1:158,831,351...158,849,506
JBrowse link
G NLRC4 NLR family CARD domain containing 4 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:32,224,449...32,265,743
Ensembl chr 2:32,224,453...32,265,732
JBrowse link
G NONO non-POU domain containing octamer binding involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522
JBrowse link
G PQBP1 polyglutamine binding protein 1 involved_in IDA (PMID:26046437) UniProt
UniProt
PMID:26046437 NCBI chr  X:48,897,930...48,903,143
Ensembl chr  X:48,890,197...48,903,402
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178
JBrowse link
G PSPC1 paraspeckle component 1 involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr13:19,671,205...19,782,945
Ensembl chr13:19,674,752...19,783,019
JBrowse link
G PYCARD PYD and CARD domain containing involved_in IDA
IEA
(PMID:21575908) UniProt
Ensembl
UniProt
PMID:21575908 GO_REF:0000107 NCBI chr16:31,201,486...31,202,760
Ensembl chr16:31,201,486...31,203,450
JBrowse link
G PYDC5 pyrin domain containing 5 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:158,999,971...159,002,751 JBrowse link
G PYHIN1 pyrin and HIN domain family member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 1:158,931,552...158,990,870
Ensembl chr 1:158,930,796...158,977,059
JBrowse link
G RBM14 RNA binding motif protein 14 involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr11:66,616,630...66,629,934
Ensembl chr11:66,616,626...66,629,934
JBrowse link
G RBM14-RBM4 RBM14-RBM4 readthrough involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr11:66,616,630...66,646,468
Ensembl chr11:66,616,626...66,646,469
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IMP (PMID:22783022) BHF-UCL
BHF-UCL
PMID:22783022 NCBI chr15:75,369,379...75,455,815
Ensembl chr15:75,369,379...75,455,842
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IMP
IEA
IDA
IBA
(PMID:18818105)
(PMID:23910378)
(PMID:21873635)
BHF-UCL
InterPro
ComplexPortal
BHF-UCL
Ensembl
GO_Central
ComplexPortal
InterPro
GO_Central
PMID:18818105 PMID:21873635 PMID:23910378 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:139,475,533...139,482,758
Ensembl chr 5:139,475,533...139,482,935
JBrowse link
G TBK1 TANK binding kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530402|PMID:15661922) Ensembl
Ensembl
MGI
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr12:64,452,120...64,502,114
Ensembl chr12:64,452,090...64,502,114
JBrowse link
G TLR4 toll like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530402|PMID:15661922) Ensembl
Ensembl
MGI
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735
JBrowse link
G TLR9 toll like receptor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 involved_in IDA (PMID:20628368) UniProt
UniProt
PMID:20628368 NCBI chr 3:100,363,431...100,401,089
Ensembl chr 3:100,363,431...100,401,089
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IDA (PMID:21512573) UniProt
UniProt
PMID:21512573 NCBI chr11:5,588,635...5,685,074
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IDA (PMID:28712728) UniProt
UniProt
PMID:28712728 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048
JBrowse link
G ZBP1 Z-DNA binding protein 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr20:57,603,852...57,620,426
Ensembl chr20:57,603,846...57,620,576
JBrowse link
G ZCCHC3 zinc finger CCHC-type containing 3 involved_in IDA
IEA
IBA
(PMID:30135424), (PMID:30193849)
(PMID:21873635)
UniProt
InterPro
GO_Central
UniProt
Ensembl
GO_Central
PMID:21873635 PMID:30135424 PMID:30193849 GO_REF:0000002 GO_REF:0000107 NCBI chr20:297,570...300,321
Ensembl chr20:297,570...300,321
JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:49,245,900...49,278,057
Ensembl chr20:49,237,946...49,278,426
JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in IDA (PMID:10225288) UniProt PMID:10225288 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G ANG angiogenin involved_in IBA
IDA
(PMID:21873635)
(PMID:12548285)
GO_Central
GO_Central
UniProt
PMID:12548285 PMID:21873635 NCBI chr14:20,684,177...20,694,186
Ensembl chr14:20,684,177...20,698,971
JBrowse link
G APP amyloid beta precursor protein involved_in IDA (PMID:20209079) UniProt PMID:20209079 NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,550...26,171,128
JBrowse link
G B2M beta-2-microglobulin involved_in IDA (PMID:23144825) UniProt PMID:23144825 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G BPI bactericidal permeability increasing protein involved_in IDA (PMID:1937776) UniProt PMID:1937776 NCBI chr20:38,304,156...38,337,505
Ensembl chr20:38,304,150...38,337,505
JBrowse link
G BPIFA1 BPI fold containing family A member 1 involved_in IDA
IBA
(PMID:23499554)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:23499554 NCBI chr20:33,235,996...33,243,306
Ensembl chr20:33,235,995...33,243,311
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IDA (PMID:12759353), (PMID:12860195), (PMID:14978112), (PMID:20209079), (PMID:7529412) UniProt PMID:7529412 PMID:12759353 PMID:12860195 PMID:14978112 PMID:20209079 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491
JBrowse link
G CTSG cathepsin G involved_in IDA (PMID:1937776) UniProt PMID:1937776 NCBI chr14:24,573,518...24,576,250
Ensembl chr14:24,573,518...24,576,250
JBrowse link
G CU639417.1 histone H2B type F-S-like involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr21:5,972,947...5,973,385
Ensembl chr21:5,972,924...5,973,383
JBrowse link
G DCD dermcidin involved_in IDA (PMID:11694882) ComplexPortal
ComplexPortal
PMID:11694882 NCBI chr12:54,644,589...54,648,365
Ensembl chr12:54,644,589...54,648,493
JBrowse link
G DEFA1 defensin alpha 1 involved_in IDA
IBA
(PMID:12860195)
(PMID:21873635)
UniProt
GO_Central
GO_Central
PMID:12860195 PMID:21873635 NCBI chr 8:6,977,649...6,980,092
Ensembl chr 8:6,977,649...6,980,092
JBrowse link
G DEFA1B defensin alpha 1B involved_in IBA
IDA
(PMID:21873635)
(PMID:12860195)
GO_Central
GO_Central
UniProt
PMID:12860195 PMID:21873635 NCBI chr 8:6,996,766...6,999,198
Ensembl chr 8:6,996,766...6,999,198
JBrowse link
G DEFA3 defensin alpha 3 involved_in IBA
IDA
(PMID:21873635)
(PMID:12860195)
GO_Central
GO_Central
UniProt
PMID:12860195 PMID:21873635 NCBI chr 8:7,015,869...7,018,297
Ensembl chr 8:7,015,869...7,018,297
JBrowse link
G DEFA4 defensin alpha 4 involved_in IBA
IDA
(PMID:21873635)
(PMID:2500436)
GO_Central
GO_Central
UniProt
PMID:2500436 PMID:21873635 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306
JBrowse link
G DEFA5 defensin alpha 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739
JBrowse link
G DEFA6 defensin alpha 6 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:6,924,697...6,926,076
Ensembl chr 8:6,924,697...6,926,076
JBrowse link
G DEFB1 defensin beta 1 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 8:6,870,592...6,877,936
Ensembl chr 8:6,870,592...6,877,936
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr11:65,120,630...65,122,134
Ensembl chr11:65,120,630...65,122,177
JBrowse link
G H2BC10 H2B clustered histone 10 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,272,931...26,273,412
Ensembl chr 6:26,272,931...26,273,412
JBrowse link
G H2BC11 H2B clustered histone 11 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,132,316...27,132,795
Ensembl chr 6:27,125,897...27,132,795
JBrowse link
G H2BC12 H2B clustered histone 12 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:27,138,293...27,146,858
Ensembl chr 6:27,146,361...27,146,855
JBrowse link
G H2BC12L H2B clustered histone 12 like involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr21:43,565,182...43,565,648
Ensembl chr21:43,565,182...43,565,648
JBrowse link
G H2BC21 H2B clustered histone 21 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:149,884,459...149,886,682
Ensembl chr 1:149,884,459...149,886,682
JBrowse link
G H2BC4 H2B clustered histone 4 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,113,170...26,123,926
Ensembl chr 6:26,114,873...26,123,926
JBrowse link
G H2BC5 H2B clustered histone 5 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,158,121...26,171,349
Ensembl chr 6:26,158,122...26,171,349
JBrowse link
G H2BC6 H2B clustered histone 6 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,183,761...26,184,230
Ensembl chr 6:26,172,059...26,184,655
JBrowse link
G H2BC7 H2B clustered histone 7 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,199,516...26,199,988
Ensembl chr 6:26,199,516...26,199,988
JBrowse link
G H2BC8 H2B clustered histone 8 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,216,200...26,216,688
Ensembl chr 6:26,216,200...26,216,688
JBrowse link
G HLA-A major histocompatibility complex, class I, A involved_in IDA (PMID:25631937) UniProt PMID:25631937 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,945,884
JBrowse link
G HLA-E major histocompatibility complex, class I, E involved_in IDA (PMID:25631937) UniProt PMID:25631937 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194
JBrowse link
G IGHA1 immunoglobulin heavy constant alpha 1 involved_in IDA (PMID:23250751) UniProt PMID:23250751 NCBI chr14:105,707,168...105,708,664
Ensembl chr14:105,703,995...105,708,665
JBrowse link
G IGHA2 immunoglobulin heavy constant alpha 2 (A2m marker) involved_in IDA (PMID:23250751) UniProt PMID:23250751 NCBI chr14:105,586,937...105,588,394
Ensembl chr14:105,583,731...105,588,395
JBrowse link
G IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) acts_upstream_of_or_within ISO (MGI:2664488|PMID:11911824), (MGI:3690573|PMID:9834074) MGI PMID:9834074 PMID:11911824 MGI:2664488 MGI:3690573 NCBI chr14:105,741,473...105,743,070
Ensembl chr14:105,736,343...105,743,071
JBrowse link
G IGHM immunoglobulin heavy constant mu involved_in IDA (PMID:21786026) UniProt
UniProt
PMID:21786026 NCBI chr14:105,851,966...105,856,217
Ensembl chr14:105,851,705...105,856,218
JBrowse link
G IGKV3-20 immunoglobulin kappa variable 3-20 involved_in IDA (PMID:23250751) UniProt PMID:23250751 NCBI chr 2:89,142,574...89,143,108
Ensembl chr 2:89,142,574...89,143,160
JBrowse link
G JCHAIN joining chain of multimeric IgA and IgM involved_in IDA (PMID:23250751) UniProt PMID:23250751 NCBI chr 4:70,655,541...70,666,508
Ensembl chr 4:70,655,541...70,681,817
JBrowse link
G LTF lactotransferrin involved_in IBA
IDA
IEA
(PMID:21873635)
(PMID:1599934), (PMID:18714013)
GO_Central
UniProt
GO_Central
InterPro
UniProt
InterPro
PMID:1599934 PMID:18714013 PMID:21873635 GO_REF:0000002 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G NPY neuropeptide Y involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:24,284,190...24,291,862
Ensembl chr 7:24,284,188...24,291,862
JBrowse link
G PI3 peptidase inhibitor 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,174,902...45,176,544
Ensembl chr20:45,174,902...45,176,544
JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr12:120,322,115...120,327,779
Ensembl chr12:120,322,115...120,327,779
JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in IDA (PMID:18714013) UniProt
UniProt
PMID:18714013 NCBI chr22:38,111,495...38,181,830
Ensembl chr22:38,111,495...38,214,778
JBrowse link
G RNASE3 ribonuclease A family member 3 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr14:20,891,385...20,892,348
Ensembl chr14:20,891,385...20,892,348
JBrowse link
G RNASE6 ribonuclease A family member k6 involved_in IBA
IDA
(PMID:21873635)
(PMID:25075772)
GO_Central
UniProt
GO_Central
UniProt
PMID:21873635 PMID:25075772 NCBI chr14:20,781,070...20,782,467
Ensembl chr14:20,781,268...20,782,467
JBrowse link
G RNASE7 ribonuclease A family member 7 involved_in IDA (PMID:23302724), (PMID:25075772) UniProt
UniProt
PMID:23302724 PMID:25075772 NCBI chr14:21,042,362...21,044,233
Ensembl chr14:21,042,316...21,044,234
JBrowse link
G RPL39 ribosomal protein L39 involved_in IDA (PMID:12860195) UniProt PMID:12860195 NCBI chr  X:119,786,504...119,791,630
Ensembl chr  X:119,786,504...119,791,630
JBrowse link
G SEMG1 semenogelin 1 involved_in IDA (PMID:18714013) UniProt
UniProt
PMID:18714013 NCBI chr20:45,207,033...45,209,768
Ensembl chr20:45,207,033...45,209,768
JBrowse link
G SEMG2 semenogelin 2 involved_in IMP (PMID:18714013) UniProt
UniProt
PMID:18714013 NCBI chr20:45,221,373...45,224,458
Ensembl chr20:45,221,373...45,224,458
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IBA
ISS
IDA
IEA
(PMID:21873635)
(PMID:18714013)
GO_Central
GO_Central
UniProt
Ensembl
UniProt
PMID:18714013 PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr20:45,252,239...45,254,564
Ensembl chr20:45,252,239...45,254,564
JBrowse link
G SPRR2A small proline rich protein 2A involved_in IDA (PMID:34735226) UniProt PMID:34735226 NCBI chr 1:153,056,120...153,057,512
Ensembl chr 1:153,056,120...153,057,512
JBrowse link
G TAC1 tachykinin precursor 1 involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:97,732,086...97,740,472
Ensembl chr 7:97,732,084...97,740,472
JBrowse link
G TF transferrin involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 3:133,661,998...133,796,641
Ensembl chr 3:133,746,040...133,796,641
JBrowse link
G VIP vasoactive intestinal peptide involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr 6:152,750,797...152,759,760
Ensembl chr 6:152,750,797...152,759,765
JBrowse link
G WFDC10A WAP four-disulfide core domain 10A involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,629,739...45,631,196
Ensembl chr20:45,629,739...45,631,196
JBrowse link
G WFDC10B WAP four-disulfide core domain 10B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,684,651...45,705,019
Ensembl chr20:45,684,651...45,705,019
JBrowse link
G WFDC11 WAP four-disulfide core domain 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,648,563...45,670,239
Ensembl chr20:45,648,563...45,670,270
JBrowse link
G WFDC12 WAP four-disulfide core domain 12 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,123,425...45,124,465
Ensembl chr20:45,123,425...45,124,465
JBrowse link
G WFDC13 WAP four-disulfide core domain 13 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,702,038...45,708,817
Ensembl chr20:45,702,038...45,708,817
JBrowse link
G WFDC2 WAP four-disulfide core domain 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,469,753...45,481,532
Ensembl chr20:45,469,753...45,481,532
JBrowse link
G WFDC3 WAP four-disulfide core domain 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,774,213...45,791,883
Ensembl chr20:45,747,944...45,791,932
JBrowse link
G WFDC5 WAP four-disulfide core domain 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,109,463...45,116,319
Ensembl chr20:45,109,452...45,115,172
JBrowse link
G WFDC9 WAP four-disulfide core domain 9 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:45,607,939...45,631,284
Ensembl chr20:45,607,939...45,631,284
JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DEFB136 defensin beta 136 involved_in IDA (PMID:34481960) UniProt PMID:34481960 NCBI chr 8:11,973,937...11,974,599
Ensembl chr 8:11,973,937...11,974,599
JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr19:8,413,305...8,439,017
Ensembl chr19:8,413,270...8,439,017
JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGALS4 galectin 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6507238|PMID:27427436) MGI
Ensembl
PMID:27427436 GO_REF:0000107 MGI:6507238 NCBI chr19:38,801,674...38,812,945
Ensembl chr19:38,801,671...38,812,945
JBrowse link
G MMP7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:4838964|PMID:20056603) MGI PMID:20056603 MGI:4838964 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750
JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin NOT|involved_in IDA (PMID:10225288) UniProt PMID:10225288 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G ANG angiogenin involved_in IDA (PMID:12548285) UniProt PMID:12548285 NCBI chr14:20,684,177...20,694,186
Ensembl chr14:20,684,177...20,698,971
JBrowse link
G APP amyloid beta precursor protein involved_in IMP (PMID:20209079) UniProt PMID:20209079 NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,550...26,171,128
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IDA (PMID:14978112), (PMID:20209079) UniProt PMID:14978112 PMID:20209079 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491
JBrowse link
G DEFA4 defensin alpha 4 involved_in IDA (PMID:2500436) UniProt PMID:2500436 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306
JBrowse link
G FAM3A FAM3 metabolism regulating signaling molecule A involved_in IDA (PMID:18212107) UniProt PMID:18212107 NCBI chr  X:154,506,171...154,516,232
Ensembl chr  X:154,506,159...154,516,242
JBrowse link
G IL36RN interleukin 36 receptor antagonist involved_in IMP (PMID:23147407) UniProt
UniProt
PMID:23147407 NCBI chr 2:113,058,638...113,064,744
Ensembl chr 2:113,058,638...113,065,382
JBrowse link
G LTF lactotransferrin involved_in IEA
IDA
(PMID:11083624) InterPro
InterPro
UniProt
PMID:11083624 GO_REF:0000002 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G NPY neuropeptide Y involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:24,284,190...24,291,862
Ensembl chr 7:24,284,188...24,291,862
JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IMP (PMID:23527010) UniProt PMID:23527010 NCBI chr 7:150,338,329...150,341,629
Ensembl chr 7:150,338,317...150,341,662
JBrowse link
G TAC1 tachykinin precursor 1 involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:97,732,086...97,740,472
Ensembl chr 7:97,732,084...97,740,472
JBrowse link
G VIP vasoactive intestinal peptide involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr 6:152,750,797...152,759,760
Ensembl chr 6:152,750,797...152,759,765
JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL10 BCL10 immune signaling adaptor involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632
JBrowse link
G CARD9 caspase recruitment domain family member 9 involved_in IDA
IMP
IEA
(PMID:26488816)
(PMID:24231284), (PMID:25057046), (PMID:25702837), (PMID:26679537), (PMID:26961233), (PMID:29080677), (PMID:33548172), (PMID:33558980)
UniProt
UniProt
Ensembl
PMID:24231284 PMID:25057046 PMID:25702837 PMID:26488816 PMID:26679537 More... GO_REF:0000107 NCBI chr 9:136,363,956...136,373,669
Ensembl chr 9:136,363,956...136,373,681
JBrowse link
G CLEC4A C-type lectin domain family 4 member A involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:8,102,907...8,138,607
Ensembl chr12:8,123,617...8,138,607
JBrowse link
G CLEC4C C-type lectin domain family 4 member C involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:7,729,383...7,749,541
Ensembl chr12:7,729,383...7,751,605
JBrowse link
G CLEC4D C-type lectin domain family 4 member D involved_in IDA
IEA
IBA
(PMID:23911656)
(PMID:21873635)
UniProt
UniProt
Ensembl
GO_Central
GO_Central
PMID:21873635 PMID:23911656 GO_REF:0000107 NCBI chr12:8,513,503...8,531,696
Ensembl chr12:8,509,475...8,522,366
JBrowse link
G CLEC4E C-type lectin domain family 4 member E involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
UniProt
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,533,305...8,540,905
Ensembl chr12:8,533,305...8,540,905
JBrowse link
G CLEC6A C-type lectin domain containing 6A involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
ARUK-UCL
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,455,962...8,478,330
Ensembl chr12:8,455,962...8,478,330
JBrowse link
G CLEC7A C-type lectin domain containing 7A involved_in ISS UniProt
ARUK-UCL
GO_REF:0000024 NCBI chr12:10,116,777...10,130,304
Ensembl chr12:10,116,777...10,130,258
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IMP
ISS
IEA
(PMID:29326275) UniProt
UniProt
Ensembl
PMID:29326275 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735
JBrowse link
G DEFB106A defensin beta 106A involved_in IDA (PMID:24189797) UniProt PMID:24189797 NCBI chr 8:7,825,139...7,829,053
Ensembl chr 8:7,825,139...7,829,053
JBrowse link
G DEFB106B defensin beta 106B involved_in IDA (PMID:24189797) UniProt PMID:24189797 NCBI chr 8:7,482,504...7,486,400
Ensembl chr 8:7,482,504...7,486,400
JBrowse link
G DEFB114 defensin beta 114 involved_in IMP (PMID:23482568) UniProt PMID:23482568 NCBI chr 6:49,960,249...49,964,164
Ensembl chr 6:49,960,249...49,964,164
JBrowse link
G DEFB119 defensin beta 119 involved_in IDA
IBA
(PMID:24449502)
(PMID:21873635)
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:24449502 NCBI chr20:31,377,163...31,390,649
Ensembl chr20:31,377,164...31,390,590
JBrowse link
G DEFB136 defensin beta 136 involved_in IDA (PMID:34481960) UniProt PMID:34481960 NCBI chr 8:11,973,937...11,974,599
Ensembl chr 8:11,973,937...11,974,599
JBrowse link
G DEFB4A defensin beta 4A involved_in IDA (PMID:30050988) UniProt PMID:30050988 NCBI chr 8:7,894,677...7,896,716
Ensembl chr 8:7,894,677...7,896,716
Ensembl chr 8:7,894,677...7,896,716
JBrowse link
G DEFB4B defensin beta 4B involved_in IDA (PMID:30050988) UniProt PMID:30050988 NCBI chr 8:7,414,855...7,416,863
Ensembl chr 8:7,894,677...7,896,716
Ensembl chr 8:7,894,677...7,896,716
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in ISS
IEA
ARUK-UCL
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr16:81,779,291...81,962,685
Ensembl chr16:81,739,097...81,962,685
JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IMP (PMID:23527010) UniProt PMID:23527010 NCBI chr 7:150,338,329...150,341,629
Ensembl chr 7:150,338,317...150,341,662
JBrowse link
G RNASE8 ribonuclease A family member 8 involved_in IDA (PMID:16940129) UniProt PMID:16940129 NCBI chr14:21,057,822...21,058,455
Ensembl chr14:21,057,822...21,058,455
JBrowse link
antimicrobial humoral immune response mediated by antimicrobial peptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in IDA (PMID:10225288) UniProt
UniProt
PMID:10225288 NCBI chr11:10,305,073...10,307,397
Ensembl chr11:10,305,073...10,307,397
JBrowse link
G ANG angiogenin involved_in IDA
IBA
(PMID:12548285)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:12548285 PMID:21873635 NCBI chr14:20,684,177...20,694,186
Ensembl chr14:20,684,177...20,698,971
JBrowse link
G APP amyloid beta precursor protein involved_in IMP (PMID:20209079) UniProt
UniProt
PMID:20209079 NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,550...26,171,128
JBrowse link
G B2M beta-2-microglobulin involved_in IDA (PMID:23144825) UniProt
UniProt
PMID:23144825 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G BPI bactericidal permeability increasing protein involved_in IDA (PMID:1937776) UniProt PMID:1937776 NCBI chr20:38,304,156...38,337,505
Ensembl chr20:38,304,150...38,337,505
JBrowse link
G BPIFA1 BPI fold containing family A member 1 involved_in IBA
IEP
(PMID:21873635)
(PMID:21805676)
GO_Central
UniProt
GO_Central
UniProt
PMID:21805676 PMID:21873635 NCBI chr20:33,235,996...33,243,306
Ensembl chr20:33,235,995...33,243,311
JBrowse link
G CALCA calcitonin related polypeptide alpha involved_in IDA (PMID:18603306) UniProt PMID:18603306 NCBI chr11:14,966,668...14,972,351
Ensembl chr11:14,966,668...14,972,351
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IMP
IDA
IEA
IBA
(PMID:17012259)
(PMID:12759353), (PMID:12860195), (PMID:14978112), (PMID:20209079), (PMID:20421939), (PMID:23537644), (PMID:7529412), (PMID:9182550)
(PMID:21873635)
UniProt
UniProt
Ensembl
GO_Central
GO_Central
PMID:7529412 PMID:9182550 PMID:12759353 PMID:12860195 PMID:14978112 More... GO_REF:0000107 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491
JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr17:34,360,328...34,363,233
Ensembl chr17:34,360,328...34,363,233
JBrowse link
G CCL11 C-C motif chemokine ligand 11 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CCL13 C-C motif chemokine ligand 13 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr17:34,356,480...34,358,610
Ensembl chr17:34,356,480...34,358,610
JBrowse link
G CCL17 C-C motif chemokine ligand 17 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr16:57,396,093...57,416,063
Ensembl chr16:57,404,767...57,416,063
JBrowse link
G CCL18 C-C motif chemokine ligand 18 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr17:36,064,272...36,072,032
Ensembl chr17:36,064,272...36,072,032
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr 9:34,689,570...34,691,276
Ensembl chr 9:34,689,570...34,691,276
JBrowse link
G CCL20 C-C motif chemokine ligand 20 involved_in IDA (PMID:12949249), (PMID:19109182) UniProt
UniProt
PMID:12949249 PMID:19109182 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr 9:34,709,005...34,710,136
Ensembl chr 9:34,709,005...34,710,136
JBrowse link
G CCL22 C-C motif chemokine ligand 22 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr16:57,357,909...57,366,189
Ensembl chr16:57,358,783...57,366,189
JBrowse link
G CCL25 C-C motif chemokine ligand 25 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr19:8,052,341...8,062,650
Ensembl chr19:8,052,318...8,062,660
JBrowse link
G CCL27 C-C motif chemokine ligand 27 involved_in IDA (PMID:19109182) UniProt
UniProt
PMID:19109182 NCBI chr 9:34,661,890...34,662,657
Ensembl chr 9:34,661,880...34,664,048
JBrowse link
G CCL28 C-C motif chemokine ligand 28 involved_in IMP (PMID:12538707) UniProt
UniProt
PMID:12538707 NCBI chr 5:43,356,975...43,412,391
Ensembl chr 5:43,376,645...43,412,391
JBrowse link
G CCL8 C-C motif chemokine ligand 8 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr17:34,319,435...34,321,402
Ensembl chr17:34,319,435...34,321,402
JBrowse link
G CU639417.1 histone H2B type F-S-like involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr21:5,972,947...5,973,385
Ensembl chr21:5,972,924...5,973,383
JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 involved_in IBA
IDA
(PMID:21873635)
(PMID:12949249)
GO_Central
UniProt
GO_Central
UniProt
PMID:12949249 PMID:21873635 NCBI chr 4:73,869,393...73,871,308
Ensembl chr 4:73,869,393...73,871,308
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IDA
IBA
(PMID:12949249)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:12949249 PMID:21873635 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497
JBrowse link
G CXCL11 C-X-C motif chemokine ligand 11 involved_in IBA
IDA
(PMID:21873635)
(PMID:12949249)
GO_Central
UniProt
GO_Central
UniProt
PMID:12949249 PMID:21873635 NCBI chr 4:76,033,682...76,036,070
Ensembl chr 4:76,033,682...76,041,415
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in IBA
IDA
(PMID:21873635)
(PMID:12949249)
GO_Central
GO_Central
UniProt
UniProt
PMID:12949249 PMID:21873635 NCBI chr 4:77,511,753...77,611,834
Ensembl chr 4:77,511,753...77,611,834
JBrowse link
G CXCL14 C-X-C motif chemokine ligand 14 involved_in IBA
IDA
(PMID:21873635)
(PMID:12949249), (PMID:19109182)
GO_Central
GO_Central
UniProt
UniProt
PMID:12949249 PMID:19109182 PMID:21873635 NCBI chr 5:135,570,679...135,578,991
Ensembl chr 5:135,570,679...135,579,279
JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:12949249)
GO_Central
GO_Central
UniProt
UniProt
PMID:12949249 PMID:21873635 NCBI chr 4:74,097,040...74,099,195
Ensembl chr 4:74,097,040...74,099,196
JBrowse link
G CXCL3 C-X-C motif chemokine ligand 3 involved_in IDA
IBA
(PMID:12949249)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:12949249 PMID:21873635 NCBI chr 4:74,036,589...74,038,689
Ensembl chr 4:74,036,589...74,038,807
JBrowse link
G CXCL5 C-X-C motif chemokine ligand 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:73,995,642...73,998,677
Ensembl chr 4:73,995,642...73,998,677
JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 involved_in IBA
IDA
(PMID:21873635)
(PMID:8399143)
GO_Central
GO_Central
UniProt
UniProt
PMID:8399143 PMID:21873635 NCBI chr 4:73,836,678...73,838,760
Ensembl chr 4:73,836,640...73,849,064
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IDA
IBA
(PMID:19109182)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:19109182 PMID:21873635 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,519...73,743,716
JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 involved_in IDA
IBA
(PMID:12949249)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:12949249 PMID:21873635 NCBI chr 4:76,001,275...76,007,509
Ensembl chr 4:76,001,275...76,007,509
JBrowse link
G DCD dermcidin involved_in IMP (PMID:11694882) UniProt
UniProt
PMID:11694882 NCBI chr12:54,644,589...54,648,365
Ensembl chr12:54,644,589...54,648,493
JBrowse link
G DEFA1 defensin alpha 1 involved_in IBA
IDA
IC
IMP
(PMID:21873635)
(PMID:12860195)
(PMID:15616305)
(PMID:17088326)
(PMID:17635867)
GO_Central
GO_Central
UniProt
UniProt
PMID:12860195 PMID:15616305 PMID:17088326 PMID:17635867 PMID:21873635 NCBI chr 8:6,977,649...6,980,092
Ensembl chr 8:6,977,649...6,980,092
JBrowse link
G DEFA1B defensin alpha 1B involved_in IMP
IBA
IC
IDA
(PMID:17635867)
(PMID:21873635)
(PMID:15616305)
(PMID:17088326)
(PMID:12860195)
UniProt
GO_Central
UniProt
GO_Central
PMID:12860195 PMID:15616305 PMID:17088326 PMID:17635867 PMID:21873635 NCBI chr 8:6,996,766...6,999,198
Ensembl chr 8:6,996,766...6,999,198
JBrowse link
G DEFA3 defensin alpha 3 involved_in IBA
IDA
IC
(PMID:21873635)
(PMID:12860195)
(PMID:15616305)
GO_Central
UniProt
GO_Central
UniProt
PMID:12860195 PMID:15616305 PMID:21873635 NCBI chr 8:7,015,869...7,018,297
Ensembl chr 8:7,015,869...7,018,297
JBrowse link
G DEFA4 defensin alpha 4 involved_in IDA
IC
IBA
(PMID:2500436)
(PMID:17088326)
(PMID:21873635)
(PMID:15616305)
UniProt
UniProt
GO_Central
GO_Central
PMID:2500436 PMID:15616305 PMID:17088326 PMID:21873635 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306
JBrowse link
G DEFA5 defensin alpha 5 involved_in IBA
IDA
IC
(PMID:21873635)
(PMID:12660734), (PMID:25782105)
(PMID:15616305)
GO_Central
UniProt
GO_Central
UniProt
PMID:12660734 PMID:15616305 PMID:21873635 PMID:25782105 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739
JBrowse link
G DEFA6 defensin alpha 6 involved_in IC
IBA
(PMID:15616305)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:15616305 PMID:21873635 NCBI chr 8:6,924,697...6,926,076
Ensembl chr 8:6,924,697...6,926,076
JBrowse link
G DEFB1 defensin beta 1 involved_in IMP
IDA
(PMID:25122636)
(PMID:12860195)
UniProt
UniProt
PMID:12860195 PMID:25122636 NCBI chr 8:6,870,592...6,877,936
Ensembl chr 8:6,870,592...6,877,936
JBrowse link
G DEFB103A defensin beta 103A involved_in IDA (PMID:11085990) UniProt
UniProt
PMID:11085990 NCBI chr 8:7,881,392...7,882,663
Ensembl chr 8:7,881,392...7,882,663
JBrowse link
G DEFB103B defensin beta 103B involved_in IDA (PMID:11085990) UniProt
UniProt
PMID:11085990 NCBI chr 8:7,428,888...7,430,348
Ensembl chr 8:7,881,392...7,882,663
Ensembl chr 8:7,881,392...7,882,663
JBrowse link
G DEFB118 defensin beta 118 involved_in IDA (PMID:15033915) UniProt
UniProt
PMID:15033915 NCBI chr20:31,368,601...31,373,923
Ensembl chr20:31,368,601...31,373,923
JBrowse link
G DEFB126 defensin beta 126 involved_in IDA (PMID:19373462) UniProt
UniProt
PMID:19373462 NCBI chr20:142,590...145,751
Ensembl chr20:142,590...145,751
JBrowse link
G DEFB127 defensin beta 127 involved_in IDA (PMID:19373462) UniProt
UniProt
PMID:19373462 NCBI chr20:157,454...159,163
Ensembl chr20:157,454...159,163
JBrowse link
G DEFB130A defensin beta 130A involved_in IMP (PMID:28181499) UniProt PMID:28181499 NCBI chr 8:12,310,962...12,318,316
Ensembl chr 8:12,310,962...12,318,316
JBrowse link
G DEFB130B defensin beta 130B involved_in IMP (PMID:28181499) UniProt PMID:28181499 NCBI chr 8:12,064,389...12,071,747
Ensembl chr 8:12,064,389...12,071,747
JBrowse link
G DEFB131A defensin beta 131A involved_in IMP (PMID:26649771) UniProt
UniProt
PMID:26649771 NCBI chr 4:9,444,414...9,450,666
Ensembl chr 4:9,444,414...9,450,666
JBrowse link
G DEFB4A defensin beta 4A involved_in IDA
IMP
(PMID:19109182)
(PMID:19109182), (PMID:30050988)
(PMID:9727055)
UniProt
UniProt
PMID:9727055 PMID:19109182 PMID:30050988 NCBI chr 8:7,894,677...7,896,716
Ensembl chr 8:7,894,677...7,896,716
Ensembl chr 8:7,894,677...7,896,716
JBrowse link
G DEFB4B defensin beta 4B involved_in IDA
IMP
(PMID:19109182)
(PMID:19109182), (PMID:30050988)
(PMID:9727055)
UniProt
UniProt
PMID:9727055 PMID:19109182 PMID:30050988 NCBI chr 8:7,414,855...7,416,863
Ensembl chr 8:7,894,677...7,896,716
Ensembl chr 8:7,894,677...7,896,716
JBrowse link
G DMBT1 deleted in malignant brain tumors 1 involved_in IDA
IMP
(PMID:11007786)
(PMID:19189310)
UniProt
UniProt
PMID:11007786 PMID:19189310 NCBI chr10:122,560,754...122,643,736
Ensembl chr10:122,560,665...122,643,736
JBrowse link
G F2 coagulation factor II, thrombin involved_in IDA (PMID:20421939) UniProt
UniProt
PMID:20421939 NCBI chr11:46,719,213...46,739,506
Ensembl chr11:46,719,196...46,739,506
JBrowse link
G FAM3A FAM3 metabolism regulating signaling molecule A involved_in IDA (PMID:18212107) UniProt
UniProt
PMID:18212107 NCBI chr  X:154,506,171...154,516,232
Ensembl chr  X:154,506,159...154,516,242
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr11:65,120,630...65,122,134
Ensembl chr11:65,120,630...65,122,177
JBrowse link
G GALP galanin like peptide involved_in IMP
IBA
(PMID:23537644)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:23537644 NCBI chr19:56,176,008...56,185,775
Ensembl chr19:56,176,008...56,185,775
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in IDA (PMID:22832495) UniProt
UniProt
PMID:22832495 NCBI chr12:6,534,517...6,538,371
Ensembl chr12:6,534,512...6,538,374
JBrowse link
G GNLY granulysin involved_in IDA
IBA
(PMID:9756476)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:9756476 PMID:21873635 NCBI chr 2:85,694,358...85,698,852
Ensembl chr 2:85,685,175...85,698,852
JBrowse link
G H2BC10 H2B clustered histone 10 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 6:26,272,931...26,273,412
Ensembl chr 6:26,272,931...26,273,412
JBrowse link
G H2BC11 H2B clustered histone 11 involved_in IDA (PMID:11859126), (PMID:12860195) UniProt
UniProt
PMID:11859126 PMID:12860195 NCBI chr 6:27,132,316...27,132,795
Ensembl chr 6:27,125,897...27,132,795
JBrowse link
G H2BC12 H2B clustered histone 12 involved_in IDA (PMID:12860195), (PMID:15019208) UniProt
UniProt
PMID:12860195 PMID:15019208 NCBI chr 6:27,138,293...27,146,858
Ensembl chr 6:27,146,361...27,146,855
JBrowse link
G H2BC12L H2B clustered histone 12 like involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr21:43,565,182...43,565,648
Ensembl chr21:43,565,182...43,565,648
JBrowse link
G H2BC21 H2B clustered histone 21 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 1:149,884,459...149,886,682
Ensembl chr 1:149,884,459...149,886,682
JBrowse link
G H2BC4 H2B clustered histone 4 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 6:26,113,170...26,123,926
Ensembl chr 6:26,114,873...26,123,926
JBrowse link
G H2BC5 H2B clustered histone 5 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 6:26,158,121...26,171,349
Ensembl chr 6:26,158,122...26,171,349
JBrowse link
G H2BC6 H2B clustered histone 6 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 6:26,183,761...26,184,230
Ensembl chr 6:26,172,059...26,184,655
JBrowse link
G H2BC7 H2B clustered histone 7 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 6:26,199,516...26,199,988
Ensembl chr 6:26,199,516...26,199,988
JBrowse link
G H2BC8 H2B clustered histone 8 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr 6:26,216,200...26,216,688
Ensembl chr 6:26,216,200...26,216,688
JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in IDA (PMID:11034317), (PMID:11113131) UniProt
UniProt
PMID:11034317 PMID:11113131 NCBI chr19:35,282,528...35,285,143
Ensembl chr19:35,280,716...35,285,143
JBrowse link
G HMGN2 high mobility group nucleosomal binding domain 2 involved_in IMP (PMID:16204630) UniProt
UniProt
PMID:16204630 NCBI chr 1:26,472,440...26,476,642
Ensembl chr 1:26,472,440...26,476,642
JBrowse link
G HRG histidine rich glycoprotein involved_in IDA (PMID:18797515) UniProt
UniProt
PMID:18797515 NCBI chr 3:186,666,014...186,678,234
Ensembl chr 3:186,660,216...186,678,234
JBrowse link
G HTN1 histatin 1 involved_in IDA (PMID:3286634) UniProt PMID:3286634 NCBI chr 4:70,050,438...70,058,848
Ensembl chr 4:70,050,438...70,058,848
JBrowse link
G HTN3 histatin 3 involved_in IDA (PMID:12711380), (PMID:3286634) UniProt
UniProt
PMID:3286634 PMID:12711380 NCBI chr 4:70,028,459...70,036,538
Ensembl chr 4:70,028,455...70,036,538
JBrowse link
G KNG1 kininogen 1 involved_in IDA (PMID:12074933) UniProt PMID:12074933 NCBI chr 3:186,717,359...186,744,410
Ensembl chr 3:186,717,348...186,744,410
JBrowse link
G KRT6A keratin 6A involved_in IMP
IDA
(PMID:23006328) UniProt PMID:23006328 NCBI chr12:52,487,176...52,493,257
Ensembl chr12:52,487,176...52,493,257
JBrowse link
G LEAP2 liver enriched antimicrobial peptide 2 involved_in IMP
IBA
(PMID:12493837)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:12493837 PMID:21873635 NCBI chr 5:132,873,668...132,875,046
Ensembl chr 5:132,873,444...132,875,046
JBrowse link
G LGALS3 galectin 3 involved_in IDA (PMID:16982911) UniProt
UniProt
PMID:16982911 NCBI chr14:55,129,252...55,145,430
Ensembl chr14:55,124,110...55,145,423
JBrowse link
G LTF lactotransferrin involved_in IMP (PMID:15155221) UniProt
UniProt
PMID:15155221 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G MUC7 mucin 7, secreted involved_in IDA (PMID:12543672) UniProt
UniProt
PMID:12543672 NCBI chr 4:70,430,492...70,482,997
Ensembl chr 4:70,430,492...70,482,997
JBrowse link
G NPPB natriuretic peptide B involved_in IDA (PMID:11410403) UniProt
UniProt
PMID:11410403 NCBI chr 1:11,857,464...11,858,945
Ensembl chr 1:11,857,464...11,858,945
JBrowse link
G NPY neuropeptide Y involved_in IDA (PMID:18603306) UniProt
UniProt
PMID:18603306 NCBI chr 7:24,284,190...24,291,862
Ensembl chr 7:24,284,188...24,291,862
JBrowse link
G NTS neurotensin involved_in IDA (PMID:12074933) UniProt PMID:12074933 NCBI chr12:85,874,295...85,882,992
Ensembl chr12:85,874,295...85,882,992
JBrowse link
G PF4 platelet factor 4 involved_in IDA
IBA
(PMID:10877842), (PMID:23245326)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:10877842 PMID:21873635 PMID:23245326 NCBI chr 4:73,980,811...73,982,124
Ensembl chr 4:73,980,811...73,982,027
JBrowse link
G PF4V1 platelet factor 4 variant 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:73,853,296...73,854,483
Ensembl chr 4:73,853,296...73,854,483
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IDA (PMID:16354652) UniProt
UniProt
PMID:16354652 NCBI chr19:46,019,153...46,023,053
Ensembl chr19:46,019,153...46,023,053
JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 involved_in IDA (PMID:16354652) UniProt
UniProt
PMID:16354652 NCBI chr 1:153,297,116...153,312,952
Ensembl chr 1:153,297,116...153,312,952
JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 involved_in IDA (PMID:16354652) UniProt
UniProt
PMID:16354652 NCBI chr 1:153,330,120...153,348,841
Ensembl chr 1:153,330,120...153,348,841
JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr12:120,322,115...120,327,779
Ensembl chr12:120,322,115...120,327,779
JBrowse link
G POMC proopiomelanocortin involved_in IDA (PMID:10670585) UniProt PMID:10670585 NCBI chr 2:25,160,860...25,168,580
Ensembl chr 2:25,160,853...25,168,903
JBrowse link
G PPBP pro-platelet basic protein involved_in IDA
IBA
(PMID:10877842)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:10877842 PMID:21873635 NCBI chr 4:73,986,439...73,988,190
Ensembl chr 4:73,986,439...73,988,190
JBrowse link
G REG1A regenerating family member 1 alpha involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:79,120,488...79,123,409
Ensembl chr 2:79,120,362...79,123,409
JBrowse link
G REG1B regenerating family member 1 beta involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:79,085,023...79,087,993
Ensembl chr 2:79,085,023...79,088,019
JBrowse link
G REG3A regenerating family member 3 alpha involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:79,157,006...79,159,753
Ensembl chr 2:79,157,003...79,159,753
JBrowse link
G REG3G regenerating family member 3 gamma involved_in IDA
IBA
(PMID:16931762)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:16931762 PMID:21873635 NCBI chr 2:79,025,702...79,028,501
Ensembl chr 2:79,025,686...79,028,505
JBrowse link
G RNASE3 ribonuclease A family member 3 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr14:20,891,385...20,892,348
Ensembl chr14:20,891,385...20,892,348
JBrowse link
G RNASE6 ribonuclease A family member k6 involved_in IDA
IBA
(PMID:25075772)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:21873635 PMID:25075772 NCBI chr14:20,781,070...20,782,467
Ensembl chr14:20,781,268...20,782,467
JBrowse link
G RNASE7 ribonuclease A family member 7 involved_in IDA (PMID:12244054), (PMID:25075772) UniProt
UniProt
PMID:12244054 PMID:25075772 NCBI chr14:21,042,362...21,044,233
Ensembl chr14:21,042,316...21,044,234
JBrowse link
G ROMO1 reactive oxygen species modulator 1 involved_in IMP (PMID:22083756) UniProt
UniProt
PMID:22083756 NCBI chr20:35,699,405...35,700,980
Ensembl chr20:35,699,272...35,700,984
JBrowse link
G RPL30 ribosomal protein L30 involved_in IDA (PMID:15019208) UniProt
UniProt
PMID:15019208 NCBI chr 8:98,041,721...98,045,545
Ensembl chr 8:98,024,851...98,046,469
JBrowse link
G RPL39 ribosomal protein L39 involved_in IDA (PMID:12860195) UniProt
UniProt
PMID:12860195 NCBI chr  X:119,786,504...119,791,630
Ensembl chr  X:119,786,504...119,791,630
JBrowse link
G RPS19 ribosomal protein S19 involved_in IDA (PMID:15019208) UniProt
UniProt
PMID:15019208 NCBI chr19:41,860,255...41,872,925
Ensembl chr19:41,860,255...41,872,925
JBrowse link
G S100A12 S100 calcium binding protein A12 involved_in IDA
IBA
(PMID:11522286)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:11522286 PMID:21873635 NCBI chr 1:153,373,711...153,375,621
Ensembl chr 1:153,373,711...153,375,621
JBrowse link
G S100A7 S100 calcium binding protein A7 involved_in IMP (PMID:15568027) UniProt
UniProt
PMID:15568027 NCBI chr 1:153,457,744...153,460,651
Ensembl chr 1:153,457,744...153,460,651
JBrowse link
G S100A9 S100 calcium binding protein A9 involved_in IBA
IDA
(PMID:21873635)
(PMID:12874352)
GO_Central
GO_Central
UniProt
PMID:12874352 PMID:21873635 NCBI chr 1:153,357,854...153,361,023
Ensembl chr 1:153,357,854...153,361,023
JBrowse link
G SEMG1 semenogelin 1 involved_in IDA (PMID:18314226) UniProt PMID:18314226 NCBI chr20:45,207,033...45,209,768
Ensembl chr20:45,207,033...45,209,768
JBrowse link
G SPAG11A sperm associated antigen 11A involved_in IMP
IBA
(PMID:16411022)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:16411022 PMID:21873635 NCBI chr 8:7,848,008...7,863,797
Ensembl chr 8:7,442,684...7,463,674
Ensembl chr 8:7,442,684...7,463,674
JBrowse link
G SPAG11B sperm associated antigen 11B involved_in IMP
IBA
(PMID:16411022)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:16411022 PMID:21873635 NCBI chr 8:7,447,754...7,463,542
Ensembl chr 8:7,442,684...7,463,674
JBrowse link
G TAC1 tachykinin precursor 1 involved_in IDA (PMID:12074933), (PMID:18603306)
(PMID:18603306)
UniProt
UniProt
PMID:12074933 PMID:18603306 NCBI chr 7:97,732,086...97,740,472
Ensembl chr 7:97,732,084...97,740,472
JBrowse link
G TOR2A torsin family 2 member A involved_in IC (PMID:24881665) UniProt PMID:24881665 NCBI chr 9:127,731,524...127,735,294
Ensembl chr 9:127,731,524...127,735,313
JBrowse link
G TSLP thymic stromal lymphopoietin involved_in IDA (PMID:24850429) UniProt
UniProt
PMID:24850429 NCBI chr 5:111,070,062...111,078,026
Ensembl chr 5:111,070,062...111,078,026
JBrowse link
G VIP vasoactive intestinal peptide involved_in IDA (PMID:18603306) UniProt
UniProt
PMID:18603306 NCBI chr 6:152,750,797...152,759,760
Ensembl chr 6:152,750,797...152,759,765
JBrowse link
G XCL1 X-C motif chemokine ligand 1 involved_in IDA (PMID:12949249) UniProt
UniProt
PMID:12949249 NCBI chr 1:168,576,605...168,582,069
Ensembl chr 1:168,576,605...168,582,069
JBrowse link
antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZU1 azurocidin 1 involved_in IMP (PMID:11994286) UniProt PMID:11994286 NCBI chr19:827,837...832,018
Ensembl chr19:825,097...832,018
JBrowse link
G BCL3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85481|PMID:9009202) Ensembl
Ensembl
MGI
PMID:9009202 GO_REF:0000107 MGI:85481 NCBI chr19:44,747,705...44,760,044
Ensembl chr19:44,747,705...44,760,044
JBrowse link
G COLEC11 collectin subfamily member 11 involved_in IDA (PMID:20956340) UniProt
UniProt
PMID:20956340 NCBI chr 2:3,595,112...3,644,644
Ensembl chr 2:3,594,832...3,644,644
JBrowse link
G CST9 cystatin 9 involved_in IBA
IDA
(PMID:21873635)
(PMID:23922243)
GO_Central
GO_Central
UniProt
UniProt
PMID:21873635 PMID:23922243 NCBI chr20:23,602,410...23,605,917
Ensembl chr20:23,602,410...23,605,917
JBrowse link
G CST9L cystatin 9 like involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:23,564,732...23,568,484
Ensembl chr20:23,564,732...23,568,484
JBrowse link
G CST9LP1 cystatin 9-like pseudogene 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:23,548,536...23,548,907
Ensembl chr20:23,547,764...23,550,652
JBrowse link
G DEFA4 defensin alpha 4 involved_in IDA (PMID:2500436) UniProt PMID:2500436 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306
JBrowse link
G LYZ lysozyme involved_in TAS Reactome
Reactome
Reactome:R-HSA-6803157 NCBI chr12:69,348,381...69,354,234
Ensembl chr12:69,348,381...69,354,234
JBrowse link
G PRSS2 serine protease 2 involved_in TAS Reactome
Reactome
Reactome:R-HSA-6803157 NCBI chr 7:142,770,970...142,774,560
Ensembl chr 7:142,760,398...142,774,564
JBrowse link
G PRSS3 serine protease 3 involved_in TAS Reactome
Reactome
Reactome:R-HSA-6803157 NCBI chr 9:33,750,679...33,799,231
Ensembl chr 9:33,750,679...33,799,231
JBrowse link
G PRTN3 proteinase 3 involved_in TAS Reactome
Reactome
Reactome:R-HSA-6803157 NCBI chr19:840,999...848,175
Ensembl chr19:840,999...848,175
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in TAS Reactome
Reactome
Reactome:R-HSA-6803157 NCBI chr 2:218,382,273...218,396,894
Ensembl chr 2:218,382,029...218,396,894
JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP1 A-kinase anchoring protein 1 involved_in IMP (PMID:31522117) UniProt
UniProt
PMID:31522117 NCBI chr17:57,085,246...57,121,344
Ensembl chr17:57,085,092...57,121,346
JBrowse link
G ATAD3A ATPase family AAA domain containing 3A involved_in IMP (PMID:31522117) UniProt
UniProt
PMID:31522117 NCBI chr 1:1,512,162...1,534,685
Ensembl chr 1:1,512,162...1,534,685
JBrowse link
G CARD8 caspase recruitment domain family member 8 involved_in IDA (PMID:33542150) UniProt
UniProt
PMID:33542150 NCBI chr19:48,179,825...48,255,946
Ensembl chr19:48,180,770...48,255,946
JBrowse link
G CLPB caseinolytic mitochondrial matrix peptidase chaperone subunit B involved_in IDA (PMID:31522117) UniProt
UniProt
PMID:31522117 NCBI chr11:72,285,495...72,434,531
Ensembl chr11:72,285,495...72,434,680
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IEP (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497
JBrowse link
G DDX58 DExD/H-box helicase 58 involved_in IDA (PMID:28469175) UniProt
UniProt
PMID:28469175 NCBI chr 9:32,455,302...32,526,196
Ensembl chr 9:32,455,302...32,526,208
JBrowse link
G DHX15 DEAH-box helicase 15 involved_in IDA
IEA
(PMID:24990078) UniProt
Ensembl
PMID:24990078 GO_REF:0000107 NCBI chr 4:24,527,475...24,584,554
Ensembl chr 4:24,517,441...24,584,554
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IEP (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr10:89,392,623...89,406,487
Ensembl chr10:89,392,546...89,406,487
JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr19:8,413,305...8,439,017
Ensembl chr19:8,413,270...8,439,017
JBrowse link
G MBL2 mannose binding lectin 2 involved_in IDA (PMID:35102342) UniProt PMID:35102342 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in IEP (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr21:41,420,558...41,459,214
Ensembl chr21:41,420,020...41,470,071
JBrowse link
G NLRP1 NLR family pyrin domain containing 1 involved_in IDA (PMID:33093214) UniProt
UniProt
PMID:33093214 NCBI chr17:5,501,396...5,584,509
Ensembl chr17:5,499,427...5,619,424
JBrowse link
G NLRP6 NLR family pyrin domain containing 6 involved_in IDA
IEA
(PMID:34161762) UniProt
Ensembl
PMID:34161762 GO_REF:0000107 NCBI chr11:278,407...285,388
Ensembl chr11:278,407...285,388
JBrowse link
G NMB neuromedin B involved_in ISS UniProt GO_REF:0000024 NCBI chr15:84,655,132...84,658,199
Ensembl chr15:84,655,129...84,658,563
JBrowse link
G NMBR neuromedin B receptor involved_in IMP
IEA
(PMID:31601264) UniProt
Ensembl
PMID:31601264 GO_REF:0000107 NCBI chr 6:142,074,484...142,147,122
Ensembl chr 6:142,058,330...142,147,122
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IEP (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr12:112,906,962...112,933,219
Ensembl chr12:112,905,856...112,933,219
JBrowse link
G PHB1 prohibitin 1 involved_in IDA (PMID:31522117) UniProt
UniProt
PMID:31522117 NCBI chr17:49,404,052...49,414,882
Ensembl chr17:49,404,049...49,414,905
JBrowse link
G PHB2 prohibitin 2 involved_in IDA (PMID:31522117) UniProt
UniProt
PMID:31522117 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,780
JBrowse link
G RNF135 ring finger protein 135 involved_in IMP (PMID:28469175), (PMID:31006531) UniProt
UniProt
PMID:28469175 PMID:31006531 NCBI chr17:30,958,921...30,999,911
Ensembl chr17:30,970,984...30,999,911
JBrowse link
G SENP7 SUMO specific peptidase 7 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:101,324,205...101,513,212
Ensembl chr 3:101,324,205...101,513,241
JBrowse link
G ZDHHC1 zinc finger DHHC-type containing 1 involved_in IMP
IEA
(PMID:25299331) UniProt
Ensembl
UniProt
Ensembl
PMID:25299331 GO_REF:0000107 NCBI chr16:67,394,152...67,416,477
Ensembl chr16:67,394,152...67,416,833
JBrowse link
G ZDHHC11 zinc finger DHHC-type containing 11 involved_in IMP (PMID:29429998) UniProt
UniProt
PMID:29429998 NCBI chr 5:795,605...860,563
Ensembl chr 5:795,605...858,973
JBrowse link
G ZDHHC11B zinc finger DHHC-type containing 11B involved_in ISO (MGI:6414701|PMID:29429998) UniProt PMID:29429998 MGI:6414701 NCBI chr 5:710,355...784,729
Ensembl chr 5:710,355...784,729
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed involved_in IDA (PMID:20421939) UniProt PMID:20421939 NCBI chr19:852,303...856,243
Ensembl chr19:851,014...856,247
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:3528786|PMID:15692051) MGI
Ensembl
PMID:15692051 GO_REF:0000107 MGI:3528786 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,734,041
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC7A C-type lectin domain containing 7A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3042099|PMID:12719478) Ensembl
MGI
PMID:12719478 GO_REF:0000107 MGI:3042099 NCBI chr12:10,116,777...10,130,304
Ensembl chr12:10,116,777...10,130,258
JBrowse link
G COLEC10 collectin subfamily member 10 involved_in IC (PMID:24174618) ComplexPortal PMID:24174618 NCBI chr 8:118,952,263...119,108,455
Ensembl chr 8:118,995,452...119,108,455
JBrowse link
G COLEC11 collectin subfamily member 11 involved_in IC (PMID:24174618) ComplexPortal PMID:24174618 NCBI chr 2:3,595,112...3,644,644
Ensembl chr 2:3,594,832...3,644,644
JBrowse link
G FCN1 ficolin 1 involved_in IMP
IC
(PMID:21037097) UniProt
ComplexPortal
UniProt
PMID:21037097 NCBI chr 9:134,903,232...134,917,912
Ensembl chr 9:134,903,232...134,917,912
JBrowse link
G FCN2 ficolin 2 involved_in IC (PMID:17215869) ComplexPortal PMID:17215869 NCBI chr 9:134,864,144...134,887,523
Ensembl chr 9:134,880,810...134,887,523
JBrowse link
G FCN3 ficolin 3 involved_in IC (PMID:17215869) ComplexPortal PMID:17215869 NCBI chr 1:27,369,110...27,374,824
Ensembl chr 1:27,369,110...27,374,824
JBrowse link
G FFAR2 free fatty acid receptor 2 involved_in IMP (PMID:21037097) UniProt
UniProt
PMID:21037097 NCBI chr19:35,448,257...35,451,767
Ensembl chr19:35,443,907...35,451,767
JBrowse link
G MASP1 MBL associated serine protease 1 involved_in IDA
IC
(PMID:22966085)
(PMID:17215869), (PMID:21037097), (PMID:24174618)
ComplexPortal
ComplexPortal
PMID:17215869 PMID:21037097 PMID:22966085 PMID:24174618 NCBI chr 3:187,217,282...187,291,737
Ensembl chr 3:187,217,282...187,291,980
JBrowse link
G MASP2 MBL associated serine protease 2 involved_in IDA
IC
(PMID:22966085)
(PMID:17215869), (PMID:21037097), (PMID:24174618)
ComplexPortal
ComplexPortal
PMID:17215869 PMID:21037097 PMID:22966085 PMID:24174618 NCBI chr 1:11,026,523...11,047,239
Ensembl chr 1:11,026,523...11,047,239
JBrowse link
G MBL2 mannose binding lectin 2 involved_in IDA (PMID:22966085) ComplexPortal
ComplexPortal
PMID:22966085 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3042099|PMID:12719478) MGI PMID:12719478 MGI:3042099 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3528769|PMID:15690042) Ensembl
MGI
PMID:15690042 GO_REF:0000107 MGI:3528769 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277
JBrowse link
G MIR19A microRNA 19a involved_in IDA (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr13:91,350,891...91,350,972
Ensembl chr13:91,350,891...91,350,972
JBrowse link
G MIR19B1 microRNA 19b-1 involved_in IDA (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr13:91,351,192...91,351,278
Ensembl chr13:91,351,192...91,351,278
JBrowse link
G MIR19B2 microRNA 19b-2 involved_in IDA (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr  X:134,169,671...134,169,766
Ensembl chr  X:134,169,671...134,169,766
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3528769|PMID:15690042) BHF-UCL
BHF-UCL
MGI
PMID:15690042 GO_REF:0000024 MGI:3528769 NCBI chr11:126,283,093...126,294,933
Ensembl chr11:126,283,065...126,298,845
JBrowse link
G TLR1 toll like receptor 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:38,787,569...38,805,644
Ensembl chr 4:38,790,677...38,856,817
JBrowse link
G TLR2 toll like receptor 2 involved_in
acts_upstream_of_or_within
TAS
ISO
(PMID:15356140)
(MGI:3528769|PMID:15690042)
BHF-UCL
BHF-UCL
MGI
PMID:15356140 PMID:15690042 MGI:3528769 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
G TLR6 toll like receptor 6 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:38,822,897...38,868,390
Ensembl chr 4:38,822,897...38,856,817
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IDA (PMID:16880211) UniProt
UniProt
PMID:16880211 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700
JBrowse link
G CD36 CD36 molecule involved_in IDA (PMID:16880211) UniProt
UniProt
PMID:16880211 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277
JBrowse link
G MIR105-1 microRNA 105-1 involved_in IMP (PMID:19509287) ARUK-UCL PMID:19509287 NCBI chr  X:152,392,219...152,392,299
Ensembl chr  X:152,392,219...152,392,299
JBrowse link
G MIR105-2 microRNA 105-2 involved_in IMP (PMID:19509287) ARUK-UCL PMID:19509287 NCBI chr  X:152,394,412...152,394,492
Ensembl chr  X:152,394,412...152,394,492
JBrowse link
G TLR2 toll like receptor 2 involved_in
acts_upstream_of_or_within
IDA (PMID:16880211)
(PMID:19931471)
UniProt
UniProt
MGI
MGI
PMID:16880211 PMID:19931471 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
G TLR6 toll like receptor 6 involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:21873635)
(PMID:19931471)
(PMID:16880211)
GO_Central
MGI
UniProt
GO_Central
MGI
UniProt
PMID:16880211 PMID:19931471 PMID:21873635 NCBI chr 4:38,822,897...38,868,390
Ensembl chr 4:38,822,897...38,856,817
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chr 7:87,503,017...87,713,295
Ensembl chr 7:87,503,017...87,713,323
JBrowse link
G CDA cytidine deaminase involved_in ISO
IEA
K-selection - confluent culture RGD
Ensembl
Ensembl
PMID:16353156 GO_REF:0000107 RGD:2316359 NCBI chr 1:20,589,097...20,618,903
Ensembl chr 1:20,589,086...20,618,903
JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638
JBrowse link
G ACTG1 actin gamma 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:81,509,971...81,512,799
Ensembl chr17:81,509,413...81,523,847
JBrowse link
G ACTR2 actin related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 2:65,227,831...65,271,253
Ensembl chr 2:65,227,788...65,271,253
JBrowse link
G ACTR3 actin related protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 2:113,889,934...113,962,596
Ensembl chr 2:113,890,063...113,962,596
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18433458 GO_REF:0000107 RGD:2315954 NCBI chr 9:133,414,337...133,459,386
Ensembl chr 9:133,414,358...133,459,402
JBrowse link
G AIF1 allograft inflammatory factor 1 involved_in ISS
IEP
IEA
(PMID:9614071) UniProt
UniProt
Ensembl
PMID:9614071 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:31,615,234...31,617,015
Ensembl chr 6:31,615,217...31,617,021
JBrowse link
G AQP4 aquaporin 4 involved_in IDA (PMID:17645239) UniProt
UniProt
PMID:17645239 NCBI chr18:26,852,038...26,865,803
Ensembl chr18:26,852,043...26,865,771
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr14:67,619,920...67,651,708
Ensembl chr14:67,619,920...67,651,708
JBrowse link
G ASL argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr 7:66,075,819...66,093,576
Ensembl chr 7:66,075,800...66,094,697
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA
ISO
with TNFalpha Ensembl
Ensembl
RGD
PMID:11072090 PMID:12589771 GO_REF:0000107 RGD:1599307 RGD:4139899 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274
JBrowse link
G CAPG capping actin protein, gelsolin like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 2:85,391,602...85,419,540
Ensembl chr 2:85,394,753...85,418,432
JBrowse link
G CASP1 caspase 1 involved_in IMP (PMID:11536016) UniProt
UniProt
PMID:11536016 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250
JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:34,360,328...34,363,233
Ensembl chr17:34,360,328...34,363,233
JBrowse link
G CCL11 C-C motif chemokine ligand 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CCL13 C-C motif chemokine ligand 13 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:34,356,480...34,358,610
Ensembl chr17:34,356,480...34,358,610
JBrowse link
G CCL14 C-C motif chemokine ligand 14 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:35,983,288...35,986,729
Ensembl chr17:35,983,288...35,987,004
JBrowse link
G CCL15 C-C motif chemokine ligand 15 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:35,997,582...36,001,553
Ensembl chr17:35,996,440...36,001,553
JBrowse link
G CCL16 C-C motif chemokine ligand 16 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:35,976,499...35,981,497
Ensembl chr17:35,976,493...35,981,497
JBrowse link
G CCL17 C-C motif chemokine ligand 17 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:57,396,093...57,416,063
Ensembl chr16:57,404,767...57,416,063
JBrowse link
G CCL18 C-C motif chemokine ligand 18 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:36,064,272...36,072,032
Ensembl chr17:36,064,272...36,072,032
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:34,689,570...34,691,276
Ensembl chr 9:34,689,570...34,691,276
JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISS
IBA
IEP
ISO
(PMID:21873635)
(PMID:9407497)
BHF-UCL
GO_Central
UniProt
BHF-UCL
RGD
UniProt
GO_Central
PMID:9407497 PMID:14512159 PMID:21873635 GO_REF:0000024 RGD:8548859 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL20 C-C motif chemokine ligand 20 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:34,709,005...34,710,136
Ensembl chr 9:34,709,005...34,710,136
JBrowse link
G CCL22 C-C motif chemokine ligand 22 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:57,357,909...57,366,189
Ensembl chr16:57,358,783...57,366,189
JBrowse link
G CCL23 C-C motif chemokine ligand 23 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:36,013,058...36,017,972
Ensembl chr17:36,013,056...36,017,972
JBrowse link
G CCL24 C-C motif chemokine ligand 24 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:75,810,825...75,823,372
Ensembl chr 7:75,810,825...75,823,356
JBrowse link
G CCL25 C-C motif chemokine ligand 25 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr19:8,052,341...8,062,650
Ensembl chr19:8,052,318...8,062,660
JBrowse link
G CCL26 C-C motif chemokine ligand 26 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:75,769,524...75,791,597
Ensembl chr 7:75,769,533...75,789,896
JBrowse link
G CCL3 C-C motif chemokine ligand 3 involved_in IEP
IBA
(PMID:9407497)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:9407497 PMID:21873635 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCL3L1 C-C motif chemokine ligand 3 like 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 Ensembl chr17:36,194,869...36,196,758 JBrowse link
G CCL3L3 C-C motif chemokine ligand 3 like 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:36,194,869...36,196,758
Ensembl chr17:36,194,869...36,196,758
JBrowse link
G CCL4 C-C motif chemokine ligand 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:36,103,827...36,105,614
Ensembl chr17:36,103,827...36,105,621
JBrowse link
G CCL4L1 C-C motif chemokine ligand 4 like 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 Ensembl chr17:36,210,924...36,212,878 JBrowse link
G CCL4L2 C-C motif chemokine ligand 4 like 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:36,211,063...36,212,873
Ensembl chr17:36,210,924...36,212,878
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IEP
IBA
(PMID:9407497)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:9407497 PMID:21873635 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CCL7 C-C motif chemokine ligand 7 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:34,270,221...34,272,242
Ensembl chr17:34,270,221...34,272,242
JBrowse link
G CCL8 C-C motif chemokine ligand 8 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:34,319,435...34,321,402
Ensembl chr17:34,319,435...34,321,402
JBrowse link
G CD47 CD47 molecule involved_in ISS ARUK-UCL
ARUK-UCL
GO_REF:0000024 NCBI chr 3:108,043,091...108,091,031
Ensembl chr 3:108,043,091...108,091,862
JBrowse link
G CD58 CD58 molecule involved_in IDA (PMID:19109405) UniProt
UniProt
PMID:19109405 NCBI chr 1:116,514,534...116,571,026
Ensembl chr 1:116,514,534...116,571,039
JBrowse link
G CDC42 cell division cycle 42 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360
JBrowse link
G CDC42EP2 CDC42 effector protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr11:65,314,866...65,322,417
Ensembl chr11:65,314,866...65,322,417
JBrowse link
G CDC42EP4 CDC42 effector protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:73,283,624...73,312,001
Ensembl chr17:73,283,624...73,312,005
JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:11071855 GO_REF:0000107 RGD:632488 NCBI chr16:10,866,206...10,943,021
Ensembl chr16:10,866,222...10,943,021
JBrowse link
G CLDN1 claudin 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18768927 GO_REF:0000107 RGD:11344890 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:57,372,490...57,385,044
Ensembl chr16:57,372,477...57,385,044
JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IDA
IEA
(PMID:18995835) UniProt
Ensembl
UniProt
PMID:18995835 GO_REF:0000107 NCBI chr 9:87,497,228...87,708,634
Ensembl chr 9:87,497,228...87,708,634
JBrowse link
G DAPK3 death associated protein kinase 3 involved_in IDA
IEA
(PMID:18995835) UniProt
UniProt
Ensembl
PMID:18995835 GO_REF:0000107 NCBI chr19:3,958,453...3,971,099
Ensembl chr19:3,958,453...3,971,123
JBrowse link
G DAXX death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016
JBrowse link
G EDN1 endothelin 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:22301113 GO_REF:0000107 RGD:8662301 NCBI chr 6:12,256,484...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
(PMID:15479637)
(MGI:5466658|PMID:23071094)
UniProt
UniProt
Ensembl
MGI
PMID:15479637 PMID:23071094 GO_REF:0000107 MGI:5466658 NCBI chr 1:219,968,600...220,046,505
Ensembl chr 1:219,968,600...220,046,530
JBrowse link
G EVL Enah/Vasp-like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr14:99,971,422...100,144,236
Ensembl chr14:99,971,449...100,144,236
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
JBrowse link
G FASLG Fas ligand involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:10029626 GO_REF:0000107 RGD:14700709 NCBI chr 1:172,659,103...172,666,876
Ensembl chr 1:172,659,103...172,666,876
JBrowse link
G FCAR Fc alpha receptor involved_in IDA (PMID:25339672) CAFA
CAFA
PMID:25339672 NCBI chr19:54,874,235...54,891,420
Ensembl chr19:54,874,235...54,891,420
JBrowse link
G FLNB filamin B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 3:58,008,422...58,172,251
Ensembl chr 3:58,008,398...58,172,251
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in IDA (PMID:15479637) UniProt
UniProt
PMID:15479637 NCBI chr12:6,534,517...6,538,371
Ensembl chr12:6,534,512...6,538,374
JBrowse link
G GBP1 guanylate binding protein 1 involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
(PMID:21873635)
(PMID:17266443), (PMID:21151871)
(MGI:4412460|PMID:18025219)
GO_Central
UniProt
GO_Central
MGI
UniProt
PMID:17266443 PMID:18025219 PMID:21151871 PMID:21873635 MGI:4412460 NCBI chr 1:89,052,319...89,065,208
Ensembl chr 1:89,051,882...89,065,360
JBrowse link
G GBP2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
(PMID:21873635)
(PMID:17266443)
(MGI:4412460|PMID:18025219)
GO_Central
UniProt
GO_Central
MGI
UniProt
PMID:17266443 PMID:18025219 PMID:21873635 MGI:4412460 NCBI chr 1:89,106,132...89,126,114
Ensembl chr 1:89,106,132...89,150,456
JBrowse link
G GBP3 guanylate binding protein 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:89,006,680...89,022,866
Ensembl chr 1:89,006,679...89,022,894
JBrowse link
G GBP4 guanylate binding protein 4 involved_in
acts_upstream_of_or_within
IEP
IBA
ISO
(PMID:17266443)
(PMID:21873635)
(MGI:4412460|PMID:18025219)
UniProt
GO_Central
UniProt
MGI
GO_Central
PMID:17266443 PMID:18025219 PMID:21873635 MGI:4412460 NCBI chr 1:89,181,144...89,198,942
Ensembl chr 1:89,181,144...89,198,942
JBrowse link
G GBP5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within
IBA
IEA
IEP
ISO
(PMID:21873635)
(PMID:17266443)
(MGI:4412460|PMID:18025219)
GO_Central
GO_Central
Ensembl
UniProt
MGI
UniProt
PMID:17266443 PMID:18025219 PMID:21873635 GO_REF:0000107 MGI:4412460 NCBI chr 1:89,256,189...89,272,860
Ensembl chr 1:89,256,189...89,272,860
JBrowse link
G GBP6 guanylate binding protein family member 6 involved_in
acts_upstream_of_or_within
IBA
ISS
ISO
(PMID:21873635)
(MGI:4412460|PMID:18025219)
GO_Central
CAFA
GO_Central
MGI
UniProt
PMID:18025219 PMID:21873635 GO_REF:0000024 MGI:4412460 NCBI chr 1:89,364,059...89,388,160
Ensembl chr 1:89,364,059...89,388,160
JBrowse link
G GBP7 guanylate binding protein 7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4412460|PMID:18025219)
GO_Central
GO_Central
MGI
PMID:18025219 PMID:21873635 MGI:4412460 NCBI chr 1:89,131,742...89,176,003
Ensembl chr 1:89,131,742...89,176,009
JBrowse link
G GSN gelsolin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 9:121,201,483...121,332,842
Ensembl chr 9:121,207,794...121,332,843
JBrowse link
G HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 involved_in IDA (PMID:8568247) UniProt
UniProt
PMID:8568247 NCBI chr 6:33,064,569...33,080,748
Ensembl chr 6:33,064,569...33,080,775
JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 involved_in ISO (MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803) BHF-UCL PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
JBrowse link
G HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,756,098...32,763,532
Ensembl chr 6:32,756,098...32,763,532
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G IL12B interleukin 12B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412460|PMID:18025219) Ensembl
Ensembl
MGI
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 5:159,314,780...159,330,487
Ensembl chr 5:159,314,780...159,330,863
JBrowse link
G IL12RB1 interleukin 12 receptor subunit beta 1 involved_in IDA (PMID:12023369) BHF-UCL
BHF-UCL
PMID:12023369 NCBI chr19:18,058,995...18,098,816
Ensembl chr19:18,058,995...18,098,944
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,253...112,164,096
JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IDA (PMID:25122610) UniProt
UniProt
PMID:25122610 NCBI chr16:85,899,162...85,922,609
Ensembl chr16:85,899,116...85,922,606
JBrowse link
G IRGM immunity related GTPase M acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 5:150,846,521...150,902,402
Ensembl chr 5:150,846,521...150,900,736
JBrowse link
G KIF16B kinesin family member 16B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr20:16,272,104...16,573,448
Ensembl chr20:16,272,104...16,573,448
JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link
G LGALS9 galectin 9 involved_in IDA (PMID:23817958) UniProt
UniProt
PMID:23817958 NCBI chr17:27,631,188...27,649,560
Ensembl chr17:27,629,798...27,649,560
JBrowse link
G MIR511 microRNA 511 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chr10:17,845,107...17,845,193
Ensembl chr10:17,845,107...17,845,193
JBrowse link
G MRC1 mannose receptor C-type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5486412|PMID:22832163) Ensembl
Ensembl
MGI
PMID:22832163 GO_REF:0000107 MGI:5486412 NCBI chr10:17,809,348...17,911,164
Ensembl chr10:17,809,348...17,911,164
JBrowse link
G MST1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chr 3:49,683,947...49,689,474
Ensembl chr 3:49,683,947...49,689,501
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO
IEA
RGD
Ensembl
PMID:7524476 GO_REF:0000107 RGD:10059620 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYO18A myosin XVIIIA acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:29,071,122...29,212,727
Ensembl chr17:29,071,122...29,180,398
JBrowse link
G MYO1C myosin IC involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:1,464,186...1,492,686
Ensembl chr17:1,464,186...1,492,686
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412460|PMID:18025219) Ensembl
Ensembl
MGI
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IDA (PMID:15231837) UniProt
UniProt
PMID:15231837 NCBI chr 3:57,556,274...57,656,495
Ensembl chr 3:57,556,274...57,566,848
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chr17:64,319,415...64,390,860
Ensembl chr17:64,319,415...64,413,776
JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 2:73,073,382...73,112,948
Ensembl chr 2:73,073,382...73,156,721
JBrowse link
G RAB12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr18:8,609,437...8,639,383
Ensembl chr18:8,609,437...8,639,383
JBrowse link
G RAB20 RAB20, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr13:110,523,066...110,561,722
Ensembl chr13:110,523,066...110,561,722
JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 3:129,087,569...129,122,150
Ensembl chr 3:129,087,569...129,122,801
JBrowse link
G RAB7B RAB7B, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:205,976,740...206,003,395
Ensembl chr 1:205,976,740...206,003,461
JBrowse link
G RPL13A ribosomal protein L13a involved_in IDA (PMID:15479637) UniProt
UniProt
PMID:15479637 NCBI chr19:49,487,608...49,492,308
Ensembl chr19:49,487,510...49,493,057
JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:59,893,121...59,950,574
Ensembl chr17:59,893,046...59,950,574
JBrowse link
G SERPINA3 serpin family A member 3 ISO RGD PMID:7619083 RGD:5147424 NCBI chr14:94,612,391...94,624,053
Ensembl chr14:94,612,384...94,624,055
JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISS ARUK-UCL
ARUK-UCL
GO_REF:0000024 NCBI chr20:1,894,167...1,940,592
Ensembl chr20:1,894,167...1,940,592
JBrowse link
G SLC26A6 solute carrier family 26 member 6 involved_in IDA (PMID:18655181) UniProt
UniProt
PMID:18655181 NCBI chr 3:48,625,723...48,635,461
Ensembl chr 3:48,625,723...48,635,493
JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chr16:11,254,417...11,256,204
Ensembl chr16:11,254,417...11,256,204
JBrowse link
G SOCS3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chr17:78,356,778...78,360,925
Ensembl chr17:78,356,778...78,360,077
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chr 8:38,142,700...38,150,952
Ensembl chr 8:38,142,700...38,150,992
JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IDA (PMID:23386060) UniProt
UniProt
PMID:23386060 NCBI chr 2:190,969,149...191,014,171
Ensembl chr 2:190,908,460...191,020,960
JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 6:144,139,963...144,191,939
Ensembl chr 6:144,150,517...144,191,939
JBrowse link
G STX4 syntaxin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr16:31,033,095...31,040,168
Ensembl chr16:31,032,889...31,042,975
JBrowse link
G STX8 syntaxin 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:9,250,471...9,575,820
Ensembl chr17:9,250,471...9,576,591
JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 9:127,611,912...127,696,029
Ensembl chr 9:127,579,370...127,696,027
JBrowse link
G STXBP2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr19:7,637,110...7,647,873
Ensembl chr19:7,636,881...7,647,873
JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:108,746,674...108,809,523
Ensembl chr 1:108,746,674...108,809,523
JBrowse link
G STXBP4 syntaxin binding protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:54,968,765...55,213,273
Ensembl chr17:54,968,727...55,173,632
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IDA (PMID:15479637) UniProt
UniProt
PMID:15479637 NCBI chr 6:85,607,784...85,643,870
Ensembl chr 6:85,607,779...85,644,063
JBrowse link
G TDGF1 teratocarcinoma-derived growth factor 1 involved_in IDA (PMID:17720976) UniProt
UniProt
PMID:17720976 NCBI chr 3:46,574,535...46,582,457
Ensembl chr 3:46,574,534...46,582,457
JBrowse link
G TLR2 toll like receptor 2 involved_in IDA (PMID:11672593) UniProt
UniProt
PMID:11672593 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,070...153,706,260
JBrowse link
G TLR3 toll like receptor 3 NOT
involved_in
ISO
IEA
thyrocytes
intestinal epithelial cells
RGD
Ensembl
Ensembl
PMID:15661832 PMID:16638093 GO_REF:0000107 RGD:5128794 RGD:5128798 NCBI chr 4:186,069,156...186,088,073
Ensembl chr 4:186,069,155...186,088,073
JBrowse link
G TLR4 toll like receptor 4 involved_in IDA (PMID:11672593) UniProt
UniProt
PMID:11672593 NCBI chr 9:117,704,403...117,724,735
Ensembl chr 9:117,704,175...117,724,735
JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:16525716 GO_REF:0000107 RGD:14985246 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G VAMP3 vesicle associated membrane protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:7,771,296...7,781,432
Ensembl chr 1:7,771,296...7,781,432
JBrowse link
G VAMP4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 1:171,700,160...171,742,065
Ensembl chr 1:171,700,160...171,742,074
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 2:85,577,586...85,582,031
Ensembl chr 2:85,561,562...85,582,031
JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593
JBrowse link
G VPS26B VPS26, retromer complex component B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr11:134,224,671...134,247,788
Ensembl chr11:134,224,671...134,247,788
JBrowse link
G WAS WASP actin nucleation promoting factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,427
JBrowse link
G WNT5A Wnt family member 5A involved_in IEP (PMID:18174455) UniProt
UniProt
PMID:18174455 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
G XCL1 X-C motif chemokine ligand 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:168,576,605...168,582,069
Ensembl chr 1:168,576,605...168,582,069
JBrowse link
G XCL2 X-C motif chemokine ligand 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:168,540,768...168,543,997
Ensembl chr 1:168,540,768...168,543,997
JBrowse link
G ZYX zyxin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 7:143,381,345...143,391,111
Ensembl chr 7:143,381,295...143,391,111
JBrowse link
cellular response to lectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO
IEA
RGD
Ensembl
PMID:2200903 GO_REF:0000107 RGD:10059628 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in ISS
IEA
ARUK-UCL
Ensembl
ARUK-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr16:81,779,291...81,962,685
Ensembl chr16:81,739,097...81,962,685
JBrowse link
G SYK spleen associated tyrosine kinase involved_in ISS
IEA
ARUK-UCL
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:104,781,006...104,928,155
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chr 7:87,503,017...87,713,295
Ensembl chr 7:87,503,017...87,713,323
JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chr10:99,782,640...99,852,594
Ensembl chr10:99,782,640...99,852,594
JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:82358|PMID:8806812) Ensembl
Ensembl
MGI
PMID:8806812 GO_REF:0000107 MGI:82358 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G ACOD1 aconitate decarboxylase 1 involved_in IDA (PMID:23609450), (PMID:23610393) UniProt
UniProt
PMID:23609450 PMID:23610393 NCBI chr13:76,948,511...76,958,638
Ensembl chr13:76,948,511...76,958,638
JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in IMP (PMID:22480688) BHF-UCL
BHF-UCL
PMID:22480688 NCBI chr 8:38,996,973...39,105,261
Ensembl chr 8:38,996,754...39,105,445
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:22871409 GO_REF:0000107 RGD:7207038 NCBI chr 9:133,414,337...133,459,386
Ensembl chr 9:133,414,358...133,459,402
JBrowse link
G AICDA activation induced cytidine deaminase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3817382|PMID:18762567) MGI
Ensembl
Ensembl
PMID:18762567 GO_REF:0000107 MGI:3817382 NCBI chr12:8,602,170...8,612,859
Ensembl chr12:8,602,155...8,613,242
JBrowse link
G AKAP8 A-kinase anchoring protein 8 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr19:15,353,385...15,379,787
Ensembl chr19:15,353,385...15,379,815
JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IDA
IEA
(PMID:7730328) BHF-UCL
BHF-UCL
Ensembl
PMID:7730328 GO_REF:0000107 NCBI chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087
JBrowse link
G ARG1 arginase 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:9013624 GO_REF:0000107 RGD:4144055 NCBI chr 6:131,573,226...131,584,329
Ensembl chr 6:131,470,832...131,584,332
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr14:67,619,920...67,651,708
Ensembl chr14:67,619,920...67,651,708
JBrowse link
G ARID5A AT-rich interaction domain 5A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:96,536,752...96,552,638
Ensembl chr 2:96,536,743...96,552,634
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA
ISO
alveolar macrophages Ensembl
Ensembl
RGD
PMID:9879717 GO_REF:0000107 RGD:4139906 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IDA (PMID:19657094) UniProt
UniProt
PMID:19657094 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766
JBrowse link
G B2M beta-2-microglobulin involved_in IDA (PMID:23144825) UniProt
UniProt
PMID:23144825 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEP (PMID:16831874) UniProt
UniProt
PMID:16831874 NCBI chr 1:85,265,776...85,276,632
Ensembl chr 1:85,265,776...85,276,632
JBrowse link
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:71493|PMID:7889565) MGI
Ensembl
Ensembl
PMID:7889565 GO_REF:0000107 MGI:71493 NCBI chr22:23,180,509...23,318,037
Ensembl chr22:23,179,704...23,318,037
JBrowse link
G BPI bactericidal permeability increasing protein involved_in IDA (PMID:1937776) UniProt PMID:1937776 NCBI chr20:38,304,156...38,337,505
Ensembl chr20:38,304,150...38,337,505
JBrowse link
G BYSL bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chr 6:41,908,759...41,933,046
Ensembl chr 6:41,921,499...41,933,046
JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in IDA (PMID:20829348) UniProt
UniProt
PMID:20829348 NCBI chr19:3,610,645...3,626,790
Ensembl chr19:3,610,645...3,626,815
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:19879657 GO_REF:0000107 RGD:2316237 NCBI chr 3:48,223,495...48,225,485
Ensembl chr 3:48,223,347...48,225,491
JBrowse link
G CAPN2 calpain 2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:23390485 GO_REF:0000107 RGD:13792657 NCBI chr 1:223,701,597...223,776,018
Ensembl chr 1:223,701,593...223,776,018
JBrowse link
G CARD16 caspase recruitment domain family member 16 involved_in IDA (PMID:15383541) UniProt
UniProt
PMID:15383541 NCBI chr11:105,041,563...105,045,335
Ensembl chr11:105,041,326...105,101,431
JBrowse link
G CARD17 caspase recruitment domain family member 17 involved_in IDA (PMID:15383541) UniProt
UniProt
PMID:15383541 NCBI chr11:105,080,453...105,101,459
Ensembl chr11:105,092,469...105,101,431
JBrowse link
G CASP1 caspase 1 involved_in IMP (PMID:11536016) UniProt
UniProt
PMID:11536016 NCBI chr11:105,025,443...105,036,686
Ensembl chr11:105,025,397...105,035,250
JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISS
ISO
BHF-UCL
BHF-UCL
RGD
PMID:8921263 GO_REF:0000024 RGD:8549522 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr 2:227,813,842...227,817,556
Ensembl chr 2:227,805,739...227,817,564
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CCR5 C-C motif chemokine receptor 5 involved_in IEP (PMID:10679098) UniProt
UniProt
PMID:10679098 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,946...46,376,206
JBrowse link
G CD14 CD14 molecule involved_in
acts_upstream_of_or_within
IMP
IEA
IDA
ISO
(PMID:8612135)
(PMID:12594207)
UniProt
UniProt
Ensembl
MGI
MGI
RGD
PMID:8612135 PMID:12594207 PMID:22511970 GO_REF:0000107 RGD:7183752 NCBI chr 5:140,631,732...140,633,701
Ensembl chr 5:140,631,728...140,633,700
JBrowse link
G CD180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1860539|PMID:10880523)
GO_Central
GO_Central
Ensembl
MGI
PMID:10880523 PMID:21873635 GO_REF:0000107 MGI:1860539 NCBI chr 5:67,179,613...67,196,799
Ensembl chr 5:67,179,613...67,196,799
JBrowse link
G CD274 CD274 molecule involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:5,450,542...5,470,554
Ensembl chr 9:5,450,503...5,470,566
JBrowse link
G CD300LB CD300 molecule like family member b acts_upstream_of_or_within ISO (MGI:5446972|PMID:22772446) MGI PMID:22772446 MGI:5446972 NCBI chr17:74,521,174...74,531,475
Ensembl chr17:74,521,174...74,531,475
JBrowse link
G CD36 CD36 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3587138|PMID:16061696) Ensembl
Ensembl
MGI
PMID:16061696 GO_REF:0000107 MGI:3587138 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chr20:46,118,314...46,129,858
Ensembl chr20:46,118,271...46,129,863
JBrowse link
G CD68 CD68 molecule involved_in ISS ARUK-UCL
ARUK-UCL
GO_REF:0000024 NCBI chr17:7,579,638...7,582,111
Ensembl chr17:7,579,491...7,582,111
JBrowse link
G CD80 CD80 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3828894|PMID:19047410)
GO_Central
GO_Central
MGI
PMID:19047410 PMID:21873635 MGI:3828894 NCBI chr 3:119,524,293...119,559,614
Ensembl chr 3:119,524,293...119,559,614
JBrowse link
G CD86 CD86 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3828894|PMID:19047410)
GO_Central
GO_Central
MGI
RGD
PMID:19047410 PMID:21039614 PMID:21873635 MGI:3828894 RGD:4892198 NCBI chr 3:122,055,362...122,121,136
Ensembl chr 3:122,055,362...122,121,139
JBrowse link
G CDC73 cell division cycle 73 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:193,122,031...193,254,815
Ensembl chr 1:193,121,983...193,254,815
JBrowse link
G CDK19 cyclin dependent kinase 19 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:20066559 GO_REF:0000107 RGD:9590278 NCBI chr 6:110,609,978...110,815,855
Ensembl chr 6:110,609,978...110,815,958
JBrowse link
G CDK4 cyclin dependent kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:78049|PMID:8543804) Ensembl
Ensembl
MGI
PMID:8543804 GO_REF:0000107 MGI:78049 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CEBPB CCAAT enhancer binding protein beta involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18405661 GO_REF:0000107 RGD:10401220 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,830...50,192,668
JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:9593684 GO_REF:0000107 RGD:728287 NCBI chr14:23,117,306...23,119,255
Ensembl chr14:23,117,036...23,120,256
JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IMP (PMID:27812135) UniProt
UniProt
PMID:27812135 NCBI chr 9:33,265,049...33,282,070
Ensembl chr 9:33,264,879...33,282,070
JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:73245|PMID:7751651) Ensembl
Ensembl
MGI
PMID:7751651 GO_REF:0000107 MGI:73245 NCBI chr 2:6,840,553...6,866,635
Ensembl chr 2:6,840,570...6,866,635
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chr15:82,543,201...82,648,795
Ensembl chr15:82,543,201...82,648,861
JBrowse link
G CSF2 colony stimulating factor 2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18387647 GO_REF:0000107 RGD:5131517 NCBI chr 5:132,073,789...132,076,170
Ensembl chr 5:132,073,789...132,076,170
JBrowse link
G CSF3 colony stimulating factor 3 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:19732808 GO_REF:0000107 RGD:5133735 NCBI chr17:40,015,440...40,017,813
Ensembl chr17:40,015,361...40,017,813
JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:10,751,246...10,779,746
Ensembl chr11:10,751,246...10,801,625
JBrowse link
G CTSG cathepsin G involved_in IDA (PMID:1937776) UniProt PMID:1937776 NCBI chr14:24,573,518...24,576,250
Ensembl chr14:24,573,518...24,576,250
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in ISS
IEA
ISO
ARUK-UCL
ARUK-UCL
Ensembl
RGD
PMID:10422773 GO_REF:0000024 GO_REF:0000107 RGD:4892028 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735
JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:10738946 PMID:21873635 RGD:5135239 NCBI chr 4:73,869,393...73,871,308
Ensembl chr 4:73,869,393...73,871,308
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:21873635)
(PMID:23776175)
GO_Central
GO_Central
MGI
MGI
PMID:21873635 PMID:23776175 NCBI chr 4:76,021,118...76,023,497
Ensembl chr 4:76,021,118...76,023,497
JBrowse link
G CXCL11 C-X-C motif chemokine ligand 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:76,033,682...76,036,070
Ensembl chr 4:76,033,682...76,041,415
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:77,511,753...77,611,834
Ensembl chr 4:77,511,753...77,611,834
JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chr17:4,733,533...4,739,928
Ensembl chr17:4,733,533...4,739,928
JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:16239643 PMID:21873635 RGD:5135237 NCBI chr 4:74,097,040...74,099,195
Ensembl chr 4:74,097,040...74,099,196
JBrowse link
G CXCL3 C-X-C motif chemokine ligand 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:74,036,589...74,038,689
Ensembl chr 4:74,036,589...74,038,807
JBrowse link
G CXCL5 C-X-C motif chemokine ligand 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:73,995,642...73,998,677
Ensembl chr 4:73,995,642...73,998,677
JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 involved_in IDA
IBA
ISO
(PMID:8399143)
(PMID:21873635)
UniProt
GO_Central
UniProt
RGD
GO_Central
PMID:8399143 PMID:15778492 PMID:21873635 RGD:5135262 NCBI chr 4:73,836,678...73,838,760
Ensembl chr 4:73,836,640...73,849,064
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IBA
IDA
ISO
(PMID:21873635)
(PMID:19912257)
GO_Central
BHF-UCL
GO_Central
RGD
BHF-UCL
PMID:19912257 PMID:21873635 PMID:31442273 RGD:150540302 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,519...73,743,716
JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:76,001,275...76,007,509
Ensembl chr 4:76,001,275...76,007,509
JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr15:74,337,762...74,367,646
Ensembl chr15:74,337,759...74,367,646
JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr10:102,830,531...102,837,413
Ensembl chr10:102,830,531...102,837,472
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IDA
IEA
(PMID:19948740) UniProt
Ensembl
UniProt
PMID:19948740 GO_REF:0000107 NCBI chr 9:121,567,074...121,785,530
Ensembl chr 9:121,567,057...121,785,530
JBrowse link
G DEFA1 defensin alpha 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:6,977,649...6,980,092
Ensembl chr 8:6,977,649...6,980,092
JBrowse link
G DEFA1B defensin alpha 1B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:6,996,766...6,999,198
Ensembl chr 8:6,996,766...6,999,198
JBrowse link
G DEFA3 defensin alpha 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3698376|PMID:11248802)
GO_Central
MGI
GO_Central
PMID:11248802 PMID:21873635 MGI:3698376 NCBI chr 8:7,015,869...7,018,297
Ensembl chr 8:7,015,869...7,018,297
JBrowse link
G DEFA4 defensin alpha 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:6,935,820...6,938,306
Ensembl chr 8:6,935,820...6,938,306
JBrowse link
G DEFA5 defensin alpha 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:7,055,304...7,056,739
Ensembl chr 8:7,055,304...7,056,739
JBrowse link
G DEFA6 defensin alpha 6 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 8:6,924,697...6,926,076
Ensembl chr 8:6,924,697...6,926,076
JBrowse link
G EDNRB endothelin receptor type B involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18091567 GO_REF:0000107 RGD:4892289 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
G EFNB2 ephrin B2 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:33794069 GO_REF:0000107 RGD:127285659 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chr10:95,694,186...95,877,266
Ensembl chr10:95,711,779...95,877,266
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chr 9:137,048,107...137,054,061
Ensembl chr 9:137,048,107...137,054,061
JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chr 2:46,297,407...46,386,697
Ensembl chr 2:46,293,667...46,386,697
JBrowse link
G EPHB2 EPH receptor B2 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:33794069 GO_REF:0000107 RGD:127285659 NCBI chr 1:22,710,838...22,921,500
Ensembl chr 1:22,710,839...22,921,500
JBrowse link
G FCAR Fc alpha receptor involved_in IDA (PMID:25339672) CAFA
CAFA
PMID:25339672 NCBI chr19:54,874,235...54,891,420
Ensembl chr19:54,874,235...54,891,420
JBrowse link
G FCGR2B Fc gamma receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:161,647,243...161,678,654
Ensembl chr 1:161,663,143...161,678,654
JBrowse link
G FCGR3A Fc gamma receptor IIIa ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:161,541,759...161,550,737
Ensembl chr 1:161,541,759...161,550,737
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FP565260.3 ICOS ligand involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr21:5,022,531...5,046,683
Ensembl chr21:5,022,493...5,040,666
JBrowse link
G FUBP1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chr 1:77,944,055...77,979,501
Ensembl chr 1:77,944,055...77,979,110
JBrowse link
G GATA1 GATA binding protein 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:17687519 GO_REF:0000107 RGD:5131526 NCBI chr  X:48,786,590...48,794,311
Ensembl chr  X:48,786,540...48,794,311
JBrowse link
G GBP2 guanylate binding protein 2 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) MGI PMID:18025219 MGI:4412460 NCBI chr 1:89,106,132...89,126,114
Ensembl chr 1:89,106,132...89,150,456
JBrowse link
G GFER growth factor, augmenter of liver regeneration involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:23073658 GO_REF:0000107 RGD:9685733 NCBI chr16:1,984,193...1,987,749
Ensembl chr16:1,984,193...1,987,749
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in
acts_upstream_of_or_within
IEP
ISO
(PMID:20547752) UniProt
UniProt
UniProt
PMID:20547752 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925
JBrowse link
G GHSR growth hormone secretagogue receptor involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:15155262 GO_REF:0000107 RGD:12905047 NCBI chr 3:172,443,291...172,448,456
Ensembl chr 3:172,443,291...172,448,456
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:29,573,475...29,589,648
Ensembl chr17:29,573,475...29,594,054
JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chr 5:177,425,523...177,442,891
Ensembl chr 5:177,403,204...177,442,901
JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr11:67,583,812...67,586,653
Ensembl chr11:67,583,742...67,586,656
JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:26,244,939...26,290,465
Ensembl chr 2:26,243,170...26,290,465
JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:23506423 GO_REF:0000107 RGD:11041627 NCBI chr19:35,282,528...35,285,143
Ensembl chr19:35,280,716...35,285,143
JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:157,085,832...157,109,044
Ensembl chr 5:157,085,422...157,142,869
JBrowse link
G HDAC5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chr17:44,076,753...44,123,641
Ensembl chr17:44,076,746...44,123,702
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISS ARUK-UCL
ARUK-UCL
GO_REF:0000024 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGB2 high mobility group box 2 involved_in IEP (PMID:19811285) UniProt
UniProt
PMID:19811285 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:11578593 GO_REF:0000107 RGD:1599044 NCBI chr 1:119,747,996...119,768,932
Ensembl chr 1:119,748,002...119,768,905
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chr19:8,444,975...8,489,114
Ensembl chr19:8,444,767...8,489,114
JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:21540803 GO_REF:0000107 RGD:10402943 NCBI chr 8:144,291,604...144,314,720
Ensembl chr 8:144,291,591...144,314,720
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) MGI PMID:18791161 MGI:3821815 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IL10 interleukin 10 involved_in
acts_upstream_of_or_within
IDA
NAS
IEA
ISO
(PMID:23071313)
(PMID:14971032)
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717)
ARUK-UCL
ARUK-UCL
BHF-UCL
Ensembl
MGI
BHF-UCL
PMID:14971032 PMID:19047410 PMID:21609717 PMID:23071313 GO_REF:0000107 MGI:3828894 MGI:5013871 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL12A interleukin 12A acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chr 3:159,988,835...159,996,019
Ensembl chr 3:159,988,835...159,996,019
JBrowse link
G IL12B interleukin 12B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) Ensembl
Ensembl
MGI
PMID:18025219 PMID:21606371 GO_REF:0000107 MGI:4412460 MGI:5013875 NCBI chr 5:159,314,780...159,330,487
Ensembl chr 5:159,314,780...159,330,863
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,253...112,164,096
JBrowse link
G IL1A interleukin 1 alpha involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493
JBrowse link
G IL1B interleukin 1 beta involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:21873635 PMID:23200736 RGD:7175528 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G IL1F10 interleukin 1 family member 10 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:113,067,970...113,075,843
Ensembl chr 2:113,067,970...113,075,843
JBrowse link
G IL24 interleukin 24 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:12182458 GO_REF:0000107 RGD:5147432 NCBI chr 1:206,897,443...206,904,139
Ensembl chr 1:206,897,443...206,904,139
JBrowse link
G IL36A interleukin 36 alpha involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:113,005,459...113,011,072
Ensembl chr 2:113,005,459...113,008,044
JBrowse link
G IL36B interleukin 36 beta involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:113,022,089...113,052,867
Ensembl chr 2:113,022,089...113,052,867
JBrowse link
G IL36G interleukin 36 gamma involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:112,978,006...112,985,658
Ensembl chr 2:112,973,203...112,985,658
JBrowse link
G IL36RN interleukin 36 receptor antagonist involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:113,058,638...113,064,744
Ensembl chr 2:113,058,638...113,065,382
JBrowse link
G IL37 interleukin 37 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:112,911,165...112,918,882
Ensembl chr 2:112,911,165...112,918,882
JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO
IMP
(PMID:23776175) RGD
MGI
MGI
PMID:2789217 PMID:23776175 RGD:11049548 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
Ensembl
GO_Central
RGD
PMID:15793310 PMID:21873635 GO_REF:0000107 RGD:1579809 NCBI chr  X:154,010,507...154,019,902
Ensembl chr  X:154,010,506...154,019,902
JBrowse link
G IRF3 interferon regulatory factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5013875|PMID:21606371) MGI
Ensembl
PMID:21606371 GO_REF:0000107 MGI:5013875 NCBI chr19:49,659,572...49,665,857
Ensembl chr19:49,659,569...49,665,875
JBrowse link
G IRF8 interferon regulatory factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3653161|PMID:9348310) Ensembl
Ensembl
MGI
PMID:9348310 GO_REF:0000107 MGI:3653161 NCBI chr16:85,899,162...85,922,609
Ensembl chr16:85,899,116...85,922,606
JBrowse link
G IRGM immunity related GTPase M involved_in IMP (PMID:25891078) UniProt
UniProt
PMID:25891078 NCBI chr 5:150,846,521...150,902,402
Ensembl chr 5:150,846,521...150,900,736
JBrowse link
G JAK2 Janus kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5013875|PMID:21606371) MGI
Ensembl
Ensembl
PMID:21606371 GO_REF:0000107 MGI:5013875 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G KLRC4-KLRK1 KLRC4-KLRK1 readthrough involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:10,372,353...10,410,146
Ensembl chr12:10,372,353...10,410,146
Ensembl chr12:10,372,353...10,410,146
JBrowse link
G KLRK1 killer cell lectin like receptor K1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3028810|PMID:14764662) MGI
Ensembl
Ensembl
PMID:14764662 GO_REF:0000107 MGI:3028810 NCBI chr12:10,372,353...10,390,041
Ensembl chr12:10,372,353...10,391,874
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:26524415 GO_REF:0000107 RGD:13703043 NCBI chr 1:241,532,378...241,595,642
Ensembl chr 1:241,532,134...241,595,642
JBrowse link
G LBP lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within
IMP
IEA
IDA
(PMID:24120359)
(PMID:12594207)
UniProt
Ensembl
UniProt
MGI
MGI
PMID:12594207 PMID:24120359 GO_REF:0000107 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013
JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chr 9:128,149,453...128,153,453
Ensembl chr 9:128,149,071...128,153,453
JBrowse link
G LDOC1 LDOC1 regulator of NFKB signaling involved_in IMP (PMID:27812135) UniProt
UniProt
PMID:27812135 NCBI chr  X:141,173,235...141,177,129
Ensembl chr  X:141,111,605...141,177,129
JBrowse link
G LILRB1 leukocyte immunoglobulin like receptor B1 involved_in IEP (PMID:18094328) UniProt
UniProt
PMID:18094328 NCBI chr19:54,616,322...54,638,022
Ensembl chr19:54,617,158...54,638,022
JBrowse link
G LILRB2 leukocyte immunoglobulin like receptor B2 involved_in IMP (PMID:14971032) BHF-UCL
BHF-UCL
PMID:14971032 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,812...54,281,184
JBrowse link
G LITAF lipopolysaccharide induced TNF factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3687609|PMID:16954198) Ensembl
Ensembl
MGI
PMID:16954198 GO_REF:0000107 MGI:3687609 NCBI chr16:11,547,722...11,640,317
Ensembl chr16:11,547,722...11,636,381
JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chr 5:179,793,986...179,796,647
Ensembl chr 5:179,793,980...179,796,647
JBrowse link
G LY96 lymphocyte antigen 96 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 8:73,991,392...74,099,857
Ensembl chr 8:73,991,392...74,029,079
JBrowse link
G MALT1 MALT1 paracaspase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16831874) UniProt
Ensembl
PMID:16831874 GO_REF:0000107 NCBI chr18:58,671,465...58,754,477
Ensembl chr18:58,671,465...58,754,477
JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:14670949 GO_REF:0000107 RGD:7495812 NCBI chr17:21,284,711...21,315,240
Ensembl chr17:21,284,672...21,315,232
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,903,877...7,914,478
Ensembl chr19:7,903,843...7,914,478
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within IDA (PMID:23776175) MGI
MGI
PMID:23776175 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,677...36,111,236
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within IDA (PMID:23776175) MGI
MGI
PMID:23776175 NCBI chr10:48,306,677...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chr 5:180,233,143...180,292,083
Ensembl chr 5:180,233,143...180,292,099
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G MIR107 microRNA 107 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr10:89,592,747...89,592,827
Ensembl chr10:89,592,747...89,592,827
JBrowse link
G MIR10A microRNA 10a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr17:48,579,838...48,579,947
Ensembl chr17:48,579,838...48,579,947
JBrowse link
G MIR125A microRNA 125a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MIR128-1 microRNA 128-1 involved_in IMP (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr 2:135,665,397...135,665,478
Ensembl chr 2:135,665,397...135,665,478
JBrowse link
G MIR128-2 microRNA 128-2 involved_in IMP (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr 3:35,744,476...35,744,559
Ensembl chr 3:35,744,476...35,744,559
JBrowse link
G MIR139 microRNA 139 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr11:72,615,063...72,615,130
Ensembl chr11:72,615,063...72,615,130
JBrowse link
G MIR140 microRNA 140 acts_upstream_of_or_within
involved_in
ISO
IDA
(MGI:3817382|PMID:18762567)
(PMID:30321456)
MGI
ARUK-UCL
PMID:18762567 PMID:30321456 MGI:3817382 NCBI chr16:69,933,081...69,933,180
Ensembl chr16:69,933,081...69,933,180
JBrowse link
G MIR142 microRNA 142 acts_upstream_of_or_within ISO (MGI:5013506|PMID:21536037) MGI PMID:21536037 MGI:5013506 NCBI chr17:58,331,232...58,331,318
Ensembl chr17:58,331,232...58,331,318
JBrowse link
G MIR146A microRNA 146a acts_upstream_of_or_within
involved_in
ISO
IDA
ISS
(MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879)
(PMID:16885212)
MGI
ARUK-UCL
PMID:16885212 PMID:18791161 PMID:21247879 GO_REF:0000024 MGI:3821815 MGI:5050043 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450
JBrowse link
G MIR146B microRNA 146b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr10:102,436,512...102,436,584
Ensembl chr10:102,436,512...102,436,584
JBrowse link
G MIR147B microRNA 147b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr15:45,433,050...45,433,129
Ensembl chr15:45,433,050...45,433,129
JBrowse link
G MIR150 microRNA 150 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr19:49,500,785...49,500,868
Ensembl chr19:49,500,785...49,500,868
JBrowse link
G MIR155 microRNA 155 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr21:25,573,980...25,574,044
Ensembl chr21:25,573,980...25,574,044
JBrowse link
G MIR15A microRNA 15a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr13:50,049,119...50,049,201
Ensembl chr13:50,049,119...50,049,201
JBrowse link
G MIR16-2 microRNA 16-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825
JBrowse link
G MIR17 microRNA 17 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr13:91,350,605...91,350,688
Ensembl chr13:91,350,605...91,350,688
JBrowse link
G MIR181A1 microRNA 181a-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:198,859,044...198,859,153
Ensembl chr 1:198,859,044...198,859,153
JBrowse link
G MIR181A2 microRNA 181a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:124,692,442...124,692,551
Ensembl chr 9:124,692,442...124,692,551
JBrowse link
G MIR181B2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:124,693,710...124,693,798
Ensembl chr 9:124,693,710...124,693,798
JBrowse link
G MIR181C microRNA 181c acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr19:13,874,699...13,874,808
Ensembl chr19:13,874,699...13,874,808
JBrowse link
G MIR182 microRNA 182 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 7:129,770,383...129,770,492
Ensembl chr 7:129,770,383...129,770,492
JBrowse link
G MIR184 microRNA 184 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr15:79,209,788...79,209,871
Ensembl chr15:79,209,788...79,209,871
JBrowse link
G MIR187 microRNA 187 involved_in IDA (PMID:23071313) ARUK-UCL PMID:23071313 NCBI chr18:35,904,818...35,904,926
Ensembl chr18:35,904,818...35,904,926
JBrowse link
G MIR193A microRNA 193a acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr17:31,559,996...31,560,083
Ensembl chr17:31,559,996...31,560,083
JBrowse link
G MIR194-1 microRNA 194-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:220,118,157...220,118,241
Ensembl chr 1:220,118,157...220,118,241
JBrowse link
G MIR194-2 microRNA 194-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr11:64,891,355...64,891,439
Ensembl chr11:64,891,355...64,891,439
JBrowse link
G MIR199A1 microRNA 199a-1 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr19:10,817,426...10,817,496
Ensembl chr19:10,817,426...10,817,496
JBrowse link
G MIR199A2 microRNA 199a-2 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 1:172,144,535...172,144,644
Ensembl chr 1:172,144,535...172,144,644
JBrowse link
G MIR200C microRNA 200c acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr12:6,963,699...6,963,766
Ensembl chr12:6,963,699...6,963,766
JBrowse link
G MIR202 microRNA 202 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr10:133,247,511...133,247,620
Ensembl chr10:133,247,511...133,247,620
JBrowse link
G MIR205 microRNA 205 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:209,432,133...209,432,242
Ensembl chr 1:209,432,133...209,432,242
JBrowse link
G MIR20A microRNA 20a involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr13:91,351,065...91,351,135
Ensembl chr13:91,351,065...91,351,135
JBrowse link
G MIR21 microRNA 21 involved_in ISO
IMP
IDA
(PMID:19946272)
(PMID:29039542)
RGD
BHF-UCL
ARUK-UCL
PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337
JBrowse link
G MIR210 microRNA 210 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr11:568,089...568,198
Ensembl chr11:568,089...568,198
JBrowse link
G MIR217 microRNA 217 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 2:55,982,967...55,983,076
Ensembl chr 2:55,982,967...55,983,076
JBrowse link
G MIR223 microRNA 223 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:34637033)
(MGI:3817382|PMID:18762567), (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879)
RGD
BHF-UCL
MGI
PMID:18762567 PMID:18791161 PMID:21247879 PMID:29707878 PMID:34637033 MGI:3817382 MGI:3821815 MGI:5050043 RGD:25823197 NCBI chr  X:66,018,870...66,018,979
Ensembl chr  X:66,018,870...66,018,979
JBrowse link
G MIR224 microRNA 224 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI
RNAcentral
PMID:18762567 PMID:21247879 GO_REF:0000115 MGI:3817382 MGI:5050043 NCBI chr  X:151,958,578...151,958,658
Ensembl chr  X:151,958,578...151,958,658
JBrowse link
G MIR23B microRNA 23b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:95,085,208...95,085,304
Ensembl chr 9:95,085,208...95,085,304
JBrowse link
G MIR24-1 microRNA 24-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:95,086,021...95,086,088
Ensembl chr 9:95,086,021...95,086,088
JBrowse link
G MIR24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr19:13,836,287...13,836,359
Ensembl chr19:13,836,287...13,836,359
JBrowse link
G MIR26A1 microRNA 26a-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 3:37,969,404...37,969,480
Ensembl chr 3:37,969,404...37,969,480
JBrowse link
G MIR26A2 microRNA 26a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr12:57,824,609...57,824,692
Ensembl chr12:57,824,609...57,824,692
JBrowse link
G MIR26B microRNA 26b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 2:218,402,646...218,402,722
Ensembl chr 2:218,402,646...218,402,722
JBrowse link
G MIR27A microRNA 27a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr19:13,836,440...13,836,517
Ensembl chr19:13,836,440...13,836,517
JBrowse link
G MIR29A microRNA 29a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 7:130,876,747...130,876,810
Ensembl chr 7:130,876,747...130,876,810
JBrowse link
G MIR29B1 microRNA 29b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539
JBrowse link
G MIR29B2 microRNA 29b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523
JBrowse link
G MIR30B microRNA 30b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 8:134,800,520...134,800,607
Ensembl chr 8:134,800,520...134,800,607
JBrowse link
G MIR30C1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:40,757,284...40,757,372
Ensembl chr 1:40,757,284...40,757,372
JBrowse link
G MIR30C2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 6:71,376,960...71,377,031
Ensembl chr 6:71,376,960...71,377,031
JBrowse link
G MIR30D microRNA 30d acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 8:134,804,876...134,804,945
Ensembl chr 8:134,804,876...134,804,945
JBrowse link
G MIR323A microRNA 323a acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr14:101,025,732...101,025,817
Ensembl chr14:101,025,732...101,025,817
JBrowse link
G MIR342 microRNA 342 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI
RNAcentral
PMID:18762567 PMID:21247879 GO_REF:0000115 MGI:3817382 MGI:5050043 NCBI chr14:100,109,655...100,109,753
Ensembl chr14:100,109,655...100,109,753
JBrowse link
G MIR345 microRNA 345 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr14:100,307,859...100,307,956
Ensembl chr14:100,307,859...100,307,956
JBrowse link
G MIR381 microRNA 381 acts_upstream_of_or_within