Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:response to biotic stimulus
go back to main search page
Accession:GO:0009607 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:synonym: Not4Curation
 narrow_synonym: response to biotic stress



show annotations for term's descendants           Sort by:
 
activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP6 caspase 6 involved_in ISO (PMID:32298652) UniProt PMID:32298652 NCBI chr32:29,897,706...29,910,522
Ensembl chr32:29,897,823...29,911,469
JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:35,511,920...35,528,759
Ensembl chr12:35,512,860...35,528,596
JBrowse link
G HEXIM1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr 9:18,384,811...18,387,981 JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chr 8:70,091,203...70,096,107
Ensembl chr 8:70,092,217...70,095,243
JBrowse link
G LOC102153882 NLR family CARD domain-containing protein 4 involved_in ISO (MGI:3662990|PMID:16648852) UniProt PMID:16648852 MGI:3662990 NCBI chr17:25,517,051...25,518,224 JBrowse link
G LOC488622 myeloid cell nuclear differentiation antigen involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr38:22,874,345...22,892,362 JBrowse link
G MATR3 matrin 3 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr11:26,736,728...26,790,449
Ensembl chr11:26,758,261...26,790,449
JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr24:17,510,209...17,529,286
Ensembl chr24:17,512,761...17,523,807
JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr38:22,921,729...22,934,276
Ensembl chr38:22,921,732...22,934,286
JBrowse link
G NONO non-POU domain containing octamer binding involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr  X:55,618,032...55,632,237
Ensembl chr  X:55,618,095...55,631,388
JBrowse link
G PQBP1 polyglutamine binding protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:42,056,660...42,060,508
Ensembl chr  X:42,056,708...42,121,818
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PSPC1 paraspeckle component 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr25:18,287,827...18,361,801
Ensembl chr25:18,287,899...18,359,553
JBrowse link
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:17,049,352...17,051,348
Ensembl chr 6:17,049,705...17,051,240
JBrowse link
G RBM14 RNA binding motif protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,683,227...50,728,512
Ensembl chr18:50,705,024...50,811,319
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr15:6,879,955...6,896,309
Ensembl chr15:6,880,065...6,888,004
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chr30:38,231,844...38,306,665
Ensembl chr30:38,232,680...38,382,635
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 2:34,783,947...34,792,204
Ensembl chr 2:34,784,232...34,789,072
JBrowse link
G TBK1 TANK binding kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530402|PMID:15661922) MGI
Ensembl
Ensembl
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr10:7,169,664...7,208,890
Ensembl chr10:7,168,007...7,208,899
JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530402|PMID:15661922) MGI
Ensembl
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
G TLR9 toll like receptor 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:37,529,322...37,547,117
Ensembl chr20:37,542,340...37,547,114
Ensembl chr20:37,542,340...37,547,114
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr33:6,976,322...7,009,618
Ensembl chr33:6,976,934...7,009,594
JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chr37:23,095,769...23,185,680
Ensembl chr37:23,095,754...23,185,586
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:23,637,905...23,661,618
Ensembl chr10:23,638,237...23,661,480
JBrowse link
G ZBP1 Z-DNA binding protein 1 involved_in ISO (MGI:6434626|PMID:32296175), (MGI:6436412|PMID:32200799)
(MGI:6453154|PMID:32350114), (MGI:6490907|PMID:33109609)
UniProt PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 MGI:6434626 MGI:6436412 MGI:6453154 MGI:6490907 NCBI chr24:42,583,674...42,589,857
Ensembl chr24:42,584,083...42,589,753
JBrowse link
G ZCCHC3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30135424), (PMID:30193849)
(MGI:6209107|PMID:30135424), (MGI:6271678|PMID:30193849)
UniProt PMID:30135424 PMID:30193849 MGI:6209107 MGI:6271678 NCBI chr24:20,537,849...20,540,098 JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in ISO (MGI:6384069|PMID:31685995) UniProt PMID:31685995 MGI:6384069 NCBI chr24:35,932,037...35,954,170
Ensembl chr24:35,932,523...35,954,170
JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr30:11,331,574...11,337,991
Ensembl chr30:11,331,569...11,337,997
JBrowse link
G BPI bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr24:26,772,410...26,800,763
Ensembl chr24:26,767,746...26,800,762
JBrowse link
G BPIFA1 BPI fold containing family A member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:22,475,407...22,482,666
Ensembl chr24:22,457,631...22,482,661
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G CE10 CE10 protein involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr24:32,847,081...32,848,913
Ensembl chr24:32,847,081...32,848,919
JBrowse link
G CTSG cathepsin G involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr 8:4,483,327...4,485,933
Ensembl chr 8:4,470,577...4,512,628
JBrowse link
G DEFB1 defensin beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr16:58,871,018...58,881,592
Ensembl chr16:58,871,018...58,881,592
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:52,072,705...52,074,337
Ensembl chr18:52,072,796...52,074,336
JBrowse link
G H2BC11 H2B clustered histone 11 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,540,629...24,543,786 JBrowse link
G H2BC12 H2B clustered histone 12 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,556,368...24,558,216
Ensembl chr35:24,557,784...24,558,164
JBrowse link
G H2BC14 H2B clustered histone 14 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:25,006,472...25,035,326
Ensembl chr35:25,006,510...25,006,890
JBrowse link
G H2BC15 H2B clustered histone 15 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:25,031,173...25,035,326
Ensembl chr35:25,031,264...25,031,644
JBrowse link
G H2BC20 H2B clustered histone 20 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr17:59,156,148...59,156,809
Ensembl chr17:59,156,280...59,156,660
JBrowse link
G H2BC4 H2B clustered histone 4 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,062,068...24,066,934
Ensembl chr35:24,066,399...24,066,779
JBrowse link
G H2BC5 H2B clustered histone 5 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,093,447...24,102,443
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
JBrowse link
G H2BC8 H2B clustered histone 8 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,130,229...24,131,736
Ensembl chr35:24,131,296...24,131,676
JBrowse link
G INHCA inhibitor of carbonic anhydrase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:30,578,853...30,634,510
Ensembl chr23:30,595,704...30,683,845
JBrowse link
G JCHAIN joining chain of multimeric IgA and IgM involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:59,962,604...59,970,812
Ensembl chr13:59,962,994...59,970,751
JBrowse link
G LOC100685852 protein WFDC9-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:32,922,063...32,929,964
Ensembl chr24:32,926,995...32,929,081
JBrowse link
G LOC100687749 60S ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr  X:91,812,101...91,816,445
Ensembl chr  X:91,811,837...91,816,319
JBrowse link
G LOC106559796 uncharacterized LOC106559796 involved_in ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProt PMID:25075772 MGI:5902674 NCBI chr15:18,024,375...18,025,871 JBrowse link
G LTF lactotransferrin involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G NPY neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr14:37,824,579...37,831,289
Ensembl chr14:37,823,861...37,831,443
JBrowse link
G PI3 peptidase inhibitor 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr24:32,504,697...32,506,214
Ensembl chr24:32,504,675...32,506,214
JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr26:16,248,417...16,257,163
Ensembl chr26:16,248,409...16,257,178
JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in ISO (PMID:18714013) UniProt PMID:18714013 NCBI chr10:26,499,033...26,559,533
Ensembl chr10:26,509,695...26,634,087
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr24:32,566,030...32,568,406
Ensembl chr24:32,566,026...32,568,420
JBrowse link
G SPAG11B sperm associated antigen 11B involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr16:59,006,365...59,011,878
Ensembl chr16:59,006,110...59,012,037
JBrowse link
G SPAG11E sperm-associated antigen 11 variant E involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:58,993,963...58,995,731
Ensembl chr16:58,993,963...58,995,731
JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr14:22,631,106...22,640,283
Ensembl chr14:22,632,642...22,640,258
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 1:42,941,655...42,950,160
Ensembl chr 1:42,941,224...42,950,700
JBrowse link
G WFDC10A WAP four-disulfide core domain 10A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:32,909,505...32,910,890
Ensembl chr24:32,909,505...32,910,860
JBrowse link
G WFDC11 WAP four-disulfide core domain 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr24:32,979,301...32,981,045 JBrowse link
G WFDC13 WAP four-disulfide core domain 13 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:33,011,202...33,029,260
Ensembl chr24:33,011,272...33,019,696
JBrowse link
G WFDC2 WAP four-disulfide core domain 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr24:32,759,763...32,764,620
Ensembl chr24:32,759,696...32,764,620
JBrowse link
G WFDC3 WAP four-disulfide core domain 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:33,087,487...33,102,721
Ensembl chr24:33,087,547...33,102,872
JBrowse link
G WFDC5 WAP four-disulfide core domain 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:32,487,339...32,492,660
Ensembl chr24:32,487,348...32,510,990
JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DEFB136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chr25:25,963,192...25,964,008
Ensembl chr25:25,963,286...25,963,991
JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chr20:52,976,503...52,990,694
Ensembl chr20:52,980,002...52,990,470
JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGALS4 galectin 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6507238|PMID:27427436) MGI
Ensembl
PMID:27427436 GO_REF:0000107 MGI:6507238 NCBI chr 1:114,281,737...114,300,709
Ensembl chr 1:114,281,803...114,291,209
Ensembl chr 1:114,281,803...114,291,209
JBrowse link
G MMP7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:4838964|PMID:20056603) MGI PMID:20056603 MGI:4838964 NCBI chr 5:29,187,902...29,196,157
Ensembl chr 5:29,187,851...29,196,153
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chr 5:29,187,902...29,196,157
Ensembl chr 5:29,187,851...29,196,153
JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin NOT|involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in ISO (PMID:14978112), (PMID:20209079) UniProt PMID:14978112 PMID:20209079 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G FAM3A FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chr  X:122,205,043...122,212,626
Ensembl chr  X:122,205,683...122,212,195
JBrowse link
G IL36RN interleukin 36 receptor antagonist involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:37,184,527...37,190,094
Ensembl chr17:37,184,801...37,189,018
JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G NPY neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr14:37,824,579...37,831,289
Ensembl chr14:37,823,861...37,831,443
JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,671,345...14,675,000
Ensembl chr16:14,671,130...14,674,926
JBrowse link
G SPAG11B sperm associated antigen 11B involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr16:59,006,365...59,011,878
Ensembl chr16:59,006,110...59,012,037
JBrowse link
G SPAG11E sperm-associated antigen 11 variant E involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:58,993,963...58,995,731
Ensembl chr16:58,993,963...58,995,731
JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr14:22,631,106...22,640,283
Ensembl chr14:22,632,642...22,640,258
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 1:42,941,655...42,950,160
Ensembl chr 1:42,941,224...42,950,700
JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:62,712,937...62,723,852
Ensembl chr 6:62,712,971...62,722,368
JBrowse link
G CARD9 caspase recruitment domain family member 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:49,110,913...49,120,758
Ensembl chr 9:49,113,923...49,120,591
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808
JBrowse link
G DEFB114 defensin beta 114 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:17,771,204...17,781,535
Ensembl chr12:17,771,246...17,781,504
JBrowse link
G DEFB119 defensin beta 119 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr24:20,905,146...20,918,291
Ensembl chr24:20,903,843...20,918,177
JBrowse link
G DEFB136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chr25:25,963,192...25,964,008
Ensembl chr25:25,963,286...25,963,991
JBrowse link
G DEFB4A defensin, beta 4A involved_in ISO (PMID:30050988) UniProt PMID:30050988 NCBI chr16:58,953,916...58,956,407
Ensembl chr16:58,953,916...58,956,407
JBrowse link
G GORASP1 golgi reassembly stacking protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:8,766,243...8,776,278
Ensembl chr23:8,766,243...8,776,288
JBrowse link
G LOC611536 C-type lectin domain family 4 member D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:37,520,289...37,559,920
Ensembl chr27:37,551,064...37,558,847
JBrowse link
G LOC611538 C-type lectin domain family 4 member E involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr27:37,561,445...37,568,652
Ensembl chr27:37,563,038...37,568,463
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:70,054,683...70,233,459
Ensembl chr 5:70,059,255...70,207,049
JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,671,345...14,675,000
Ensembl chr16:14,671,130...14,674,926
JBrowse link
antimicrobial humoral immune response mediated by antimicrobial peptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chr21:33,472,197...33,474,472
Ensembl chr21:33,471,623...33,474,495
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr30:11,331,574...11,337,991
Ensembl chr30:11,331,569...11,337,997
JBrowse link
G BPI bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr24:26,772,410...26,800,763
Ensembl chr24:26,767,746...26,800,762
JBrowse link
G BPIFA1 BPI fold containing family A member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:22,475,407...22,482,666
Ensembl chr24:22,457,631...22,482,661
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G CBD103 beta-defensin 103 involved_in ISO (PMID:11085990) UniProt PMID:11085990 NCBI chr16:58,965,216...58,966,773
Ensembl chr16:58,965,216...58,967,712
JBrowse link
G CBD131 beta-defensin 43 involved_in ISO (PMID:26649771) UniProt PMID:26649771 NCBI chr25:25,887,535...25,904,480
Ensembl chr25:25,887,535...25,904,355
JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 9:38,931,895...38,936,969
Ensembl chr 9:38,933,514...38,961,187
JBrowse link
G CCL13 chemokine (C-C motif) ligand 13 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:38,938,944...38,940,231
Ensembl chr 9:38,938,135...38,940,231
JBrowse link
G CCL17 C-C motif chemokine ligand 17 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 2:59,001,463...59,014,347
Ensembl chr 2:59,001,464...59,005,230
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr11:51,357,706...51,359,207
Ensembl chr11:51,340,530...51,359,365
JBrowse link
G CCL20 C-C motif chemokine ligand 20 involved_in ISO (PMID:12949249), (PMID:19109182) UniProt PMID:12949249 PMID:19109182 NCBI chr25:40,506,385...40,509,903
Ensembl chr25:40,506,753...40,509,709
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr11:51,375,107...51,375,790 JBrowse link
G CCL22 C-C motif chemokine ligand 22 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 2:59,039,650...59,045,519
Ensembl chr 2:59,040,539...59,045,625
JBrowse link
G CCL25 C-C motif chemokine ligand 25 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr20:52,689,674...52,722,291
Ensembl chr20:52,712,979...52,722,018
JBrowse link
G CCL27 C-C motif chemokine ligand 27 involved_in ISO (PMID:19109182) UniProt PMID:19109182 NCBI chr11:51,334,870...51,338,752
Ensembl chr11:51,334,778...51,335,591
JBrowse link
G CCL28 C-C motif chemokine ligand 28 involved_in ISO (PMID:12538707)
(MGI:5897759|PMID:12538707)
UniProt PMID:12538707 MGI:5897759 NCBI chr 4:66,567,139...66,597,310
Ensembl chr 4:66,566,989...66,597,459
JBrowse link
G CCL8 C-C motif chemokine ligand 8 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 9:38,949,184...38,950,702
Ensembl chr 9:38,948,184...38,950,803
JBrowse link
G CRSP-3 calcitonin receptor-stimulating peptide 3 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr21:37,676,841...37,680,643
Ensembl chr21:37,676,841...37,680,645
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr32:598,406...599,925
Ensembl chr32:597,987...599,979
JBrowse link
G CXCL11 C-X-C motif chemokine ligand 11 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr32:631,084...636,997
Ensembl chr32:631,478...632,868
Ensembl chr32:631,478...632,868
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:2,047,277...2,053,277
Ensembl chr32:2,047,315...2,052,833
JBrowse link
G CXCL14 C-X-C motif chemokine ligand 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:23,598,640...23,606,850
Ensembl chr11:23,599,645...23,606,823
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
JBrowse link
G DEFB1 defensin beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr16:58,871,018...58,881,592
Ensembl chr16:58,871,018...58,881,592
JBrowse link
G DEFB118 defensin beta 118 involved_in ISO (PMID:15033915) UniProt PMID:15033915 NCBI chr24:20,894,219...20,900,503
Ensembl chr24:20,893,663...20,900,618
JBrowse link
G DEFB126 defensin beta 126 involved_in ISO (PMID:19373462) UniProt PMID:19373462 NCBI chr24:20,725,762...20,730,314
Ensembl chr24:20,725,762...20,730,314
JBrowse link
G DEFB127 defensin beta 127 involved_in ISO (PMID:19373462) UniProt PMID:19373462 NCBI chr24:20,670,771...20,673,961
Ensembl chr24:20,638,838...20,674,041
JBrowse link
G DEFB4A defensin, beta 4A involved_in ISO (PMID:9727055)
(PMID:19109182), (PMID:30050988)
UniProt PMID:9727055 PMID:19109182 PMID:30050988 NCBI chr16:58,953,916...58,956,407
Ensembl chr16:58,953,916...58,956,407
JBrowse link
G DMBT1 deleted in malignant brain tumors 1 involved_in ISO (PMID:19189310)
(PMID:11007786)
UniProt PMID:11007786 PMID:19189310 NCBI chr28:32,198,250...32,286,517
Ensembl chr28:32,219,448...32,286,532
JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:42,782,744...42,799,531
Ensembl chr18:42,782,751...42,799,459
JBrowse link
G FAM3A FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chr  X:122,205,043...122,212,626
Ensembl chr  X:122,205,683...122,212,195
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:52,072,705...52,074,337
Ensembl chr18:52,072,796...52,074,336
JBrowse link
G GALP galanin like peptide involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:101,722,834...101,729,913
Ensembl chr 1:101,722,805...101,730,046
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) UniProt PMID:22832495 NCBI chr27:38,468,889...38,472,653
Ensembl chr27:38,468,889...38,472,385
JBrowse link
G H2BC11 H2B clustered histone 11 involved_in ISO (PMID:11859126), (PMID:12860195) UniProt PMID:11859126 PMID:12860195 NCBI chr35:24,540,629...24,543,786 JBrowse link
G H2BC12 H2B clustered histone 12 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,556,368...24,558,216
Ensembl chr35:24,557,784...24,558,164
JBrowse link
G H2BC14 H2B clustered histone 14 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:25,006,472...25,035,326
Ensembl chr35:25,006,510...25,006,890
JBrowse link
G H2BC15 H2B clustered histone 15 involved_in ISO (PMID:12860195), (PMID:15019208) UniProt PMID:12860195 PMID:15019208 NCBI chr35:25,031,173...25,035,326
Ensembl chr35:25,031,264...25,031,644
JBrowse link
G H2BC20 H2B clustered histone 20 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr17:59,156,148...59,156,809
Ensembl chr17:59,156,280...59,156,660
JBrowse link
G H2BC4 H2B clustered histone 4 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,062,068...24,066,934
Ensembl chr35:24,066,399...24,066,779
JBrowse link
G H2BC5 H2B clustered histone 5 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,093,447...24,102,443
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
Ensembl chr35:24,131,296...24,131,676
JBrowse link
G H2BC8 H2B clustered histone 8 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr35:24,130,229...24,131,736
Ensembl chr35:24,131,296...24,131,676
JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in ISO (PMID:11034317), (PMID:11113131) UniProt PMID:11034317 PMID:11113131 NCBI chr 1:117,305,531...117,306,587
Ensembl chr 1:117,305,411...117,306,619
JBrowse link
G HMGN2 high mobility group nucleosomal binding domain 2 involved_in ISO (PMID:16204630) UniProt PMID:16204630 NCBI chr 2:73,579,042...73,582,786
Ensembl chr 2:73,579,042...73,610,696
JBrowse link
G HRG histidine rich glycoprotein involved_in ISO (MGI:5294287|PMID:18797515)
(PMID:18797515)
UniProt PMID:18797515 MGI:5294287 NCBI chr34:19,276,487...19,286,540
Ensembl chr34:19,276,549...19,286,537
JBrowse link
G KNG1 kininogen 1 involved_in ISO (PMID:12074933) UniProt PMID:12074933 NCBI chr34:19,288,629...19,318,096
Ensembl chr34:19,287,109...19,318,081
JBrowse link
G LEAP2 liver enriched antimicrobial peptide 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:21,156,051...21,157,197
Ensembl chr11:21,156,037...21,157,196
JBrowse link
G LGALS3 galectin 3 involved_in ISO (PMID:16982911) UniProt PMID:16982911 NCBI chr 8:30,977,438...30,994,711
Ensembl chr 8:30,983,633...30,994,705
JBrowse link
G LOC100687463 regenerating islet-derived protein 3-gamma-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:44,826,680...44,829,478 JBrowse link
G LOC100687749 60S ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr  X:91,812,101...91,816,445
Ensembl chr  X:91,811,837...91,816,319
JBrowse link
G LOC106557449 alveolar macrophage chemotactic factor-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:62,514,244...62,516,439
Ensembl chr13:62,513,898...62,515,218
JBrowse link
G LOC106559796 uncharacterized LOC106559796 involved_in ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProt PMID:25075772 MGI:5902674 NCBI chr15:18,024,375...18,025,871 JBrowse link
G LOC111090436 antimicrobial peptide NK-lysin-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:39,326,018...39,329,859 JBrowse link
G LOC486523 keratin 6A involved_in ISO (PMID:23006328)
(MGI:5466437|PMID:23006328)
UniProt PMID:23006328 MGI:5466437 NCBI chr27:2,609,414...2,623,810 JBrowse link
G LOC490356 lymphotactin involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 7:29,986,433...29,991,096 JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G MUC7 mucin 7, secreted involved_in ISO (PMID:12543672) UniProt PMID:12543672 NCBI chr13:59,805,768...59,813,415 JBrowse link
G NPPB natriuretic peptide B involved_in ISO (PMID:11410403) UniProt PMID:11410403 NCBI chr 2:84,395,844...84,397,473 JBrowse link
G NPY neuropeptide Y involved_in ISO (PMID:18603306)
(PMID:9756788)
UniProt PMID:9756788 PMID:18603306 NCBI chr14:37,824,579...37,831,289
Ensembl chr14:37,823,861...37,831,443
JBrowse link
G NTS neurotensin involved_in ISO (PMID:12074933) UniProt PMID:12074933 NCBI chr15:27,361,002...27,372,232
Ensembl chr15:27,361,002...27,372,232
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242
JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr26:16,248,417...16,257,163
Ensembl chr26:16,248,409...16,257,178
JBrowse link
G POMC proopiomelanocortin involved_in ISO (PMID:10670585) UniProt PMID:10670585 NCBI chr17:19,431,396...19,438,247
Ensembl chr17:19,431,585...19,434,440
JBrowse link
G PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:62,526,571...62,528,527
Ensembl chr13:62,526,571...62,528,527
JBrowse link
G REG3A regenerating islet-derived 3 alpha involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:44,859,106...44,864,793
Ensembl chr17:44,859,137...44,861,899
JBrowse link
G ROMO1 reactive oxygen species modulator 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr24:24,614,920...24,616,586
Ensembl chr24:24,615,197...24,616,582
Ensembl chr25:24,615,197...24,616,582
JBrowse link
G RPL30 ribosomal protein L30 involved_in ISO (PMID:15019208) UniProt PMID:15019208 NCBI chr13:301,263...304,854 JBrowse link
G RPS19 ribosomal protein S19 involved_in ISO (PMID:15019208) UniProt PMID:15019208 NCBI chr 1:112,418,800...112,427,445
Ensembl chr 1:112,411,281...112,427,381
JBrowse link
G S100A12 S100 calcium binding protein A12 involved_in ISO (PMID:11522286) UniProt PMID:11522286 NCBI chr 7:43,554,078...43,555,470
Ensembl chr 7:43,554,146...43,555,475
JBrowse link
G S100A9 S100 calcium binding protein A9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:43,566,993...43,570,074 JBrowse link
G SPAG11B sperm associated antigen 11B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:59,006,365...59,011,878
Ensembl chr16:59,006,110...59,012,037
JBrowse link
G SPAG11E sperm-associated antigen 11 variant E involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:58,993,963...58,995,731
Ensembl chr16:58,993,963...58,995,731
JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:12074933), (PMID:18603306)
(PMID:18603306)
UniProt PMID:12074933 PMID:18603306 NCBI chr14:22,631,106...22,640,283
Ensembl chr14:22,632,642...22,640,258
JBrowse link
G TSLP thymic stromal lymphopoietin involved_in ISO (PMID:24850429) UniProt PMID:24850429 NCBI chr 3:1,502,469...1,507,696
Ensembl chr 3:1,503,188...1,507,696
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 1:42,941,655...42,950,160
Ensembl chr 1:42,941,224...42,950,700
JBrowse link
antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (MGI:85481|PMID:9009202) MGI PMID:9009202 MGI:85481 NCBI chr 1:110,620,850...110,628,830
Ensembl chr 1:110,620,827...110,654,771
JBrowse link
G COLEC11 collectin subfamily member 11 involved_in ISO (PMID:20956340) UniProt PMID:20956340 NCBI chr17:2,147,679...2,180,096
Ensembl chr17:2,147,882...2,180,098
JBrowse link
G LOC102156375 probable cystatin-15 involved_in ISO (PMID:23922243) UniProt PMID:23922243 NCBI chr24:144,115...148,182 JBrowse link
G LOC485559 cystatin 9 (testatin) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:1,913...5,329 JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP1 A-kinase anchoring protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:31,884,028...31,908,142
Ensembl chr 9:31,885,478...31,904,386
JBrowse link
G ATAD3A ATPase family AAA domain containing 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,587,385...56,613,475
Ensembl chr 5:56,587,428...56,612,746
JBrowse link
G CLPB caseinolytic mitochondrial matrix peptidase chaperone subunit B involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr21:25,710,634...25,855,418
Ensembl chr21:25,710,723...25,852,857
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr32:598,406...599,925
Ensembl chr32:597,987...599,979
JBrowse link
G DDX58 DExD/H-box helicase 58 involved_in ISO (PMID:28469175) UniProt PMID:28469175 NCBI chr11:49,764,252...49,799,626
Ensembl chr11:49,764,267...49,799,527
JBrowse link
G DHX15 DEAH-box helicase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,549,946...85,609,598
Ensembl chr 3:85,549,981...85,609,612
JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981
JBrowse link
G LOC491519 caspase recruitment domain family, member 8 involved_in ISO (PMID:33542150) UniProt PMID:33542150 NCBI chr 1:107,994,215...108,025,875 JBrowse link
G LOC609445 palmitoyltransferase ZDHHC11 involved_in ISO (MGI:6414701|PMID:29429998) UniProt PMID:29429998 MGI:6414701 NCBI chr34:11,567,784...11,614,975 JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chr20:52,976,503...52,990,694
Ensembl chr20:52,980,002...52,990,470
JBrowse link
G MBL1 mannose binding lectin 1 involved_in ISO (PMID:35102342) UniProt PMID:35102342 NCBI chr 4:29,419,886...29,424,377 JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350
JBrowse link
G NLRP1 NLR family pyrin domain containing 1 involved_in ISO (PMID:33093214) UniProt PMID:33093214 NCBI chr 5:31,264,554...31,299,538
Ensembl chr 5:31,266,621...31,299,304
JBrowse link
G NLRP6 NLR family pyrin domain containing 6 involved_in ISO (PMID:34161762)
(MGI:6833928|PMID:34678144)
(MGI:5699624|PMID:26494172)
UniProt PMID:26494172 PMID:34161762 PMID:34678144 MGI:5699624 MGI:6833928 NCBI chr18:25,433,481...25,440,703
Ensembl chr18:25,433,698...25,440,740
JBrowse link
G NMB neuromedin B involved_in ISO (MGI:6435299|PMID:31601264) UniProt PMID:31601264 MGI:6435299 NCBI chr 3:53,927,891...53,931,129
Ensembl chr 3:53,927,900...53,931,069
JBrowse link
G NMBR neuromedin B receptor involved_in ISO (PMID:31601264)
(MGI:6435299|PMID:31601264)
UniProt PMID:31601264 MGI:6435299 NCBI chr 1:33,772,687...33,858,112
Ensembl chr 1:33,772,690...33,801,720
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr26:10,385,393...10,396,734
Ensembl chr26:10,385,447...10,396,733
JBrowse link
G PHB1 prohibitin 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chr 9:25,525,711...25,536,722
Ensembl chr 9:25,526,649...25,536,722
JBrowse link
G PHB2 prohibitin 2 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chr27:38,075,769...38,080,440
Ensembl chr27:38,075,652...38,080,109
JBrowse link
G RNF135 ring finger protein 135 involved_in ISO (PMID:28469175), (PMID:31006531)
(MGI:6152590|PMID:21147464), (MGI:6155526|PMID:23950712)
UniProt PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 MGI:6152590 MGI:6155526 NCBI chr 9:40,794,772...40,809,022
Ensembl chr 9:40,795,297...40,808,737
JBrowse link
G SENP7 SUMO specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:7,787,910...7,927,679
Ensembl chr33:7,787,910...7,927,550
JBrowse link
G ZDHHC1 zinc finger DHHC-type containing 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:81,985,974...82,006,877
Ensembl chr 5:81,985,998...82,006,885
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:57,789,044...57,790,932
Ensembl chr20:57,788,062...57,790,932
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of ISO (MGI:3528786|PMID:15692051) MGI PMID:15692051 MGI:3528786 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC7A C-type lectin domain containing 7A acts_upstream_of_or_within ISO (MGI:3042099|PMID:12719478) MGI PMID:12719478 MGI:3042099 NCBI chr27:35,852,685...35,885,673
Ensembl chr27:35,853,099...36,007,157
JBrowse link
G FCN2 ficolin 2 involved_in ISO (PMID:21037097) UniProt PMID:21037097 NCBI chr 9:50,868,942...50,876,001
Ensembl chr 9:50,868,973...50,875,792
JBrowse link
G FFAR2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:117,197,535...117,201,613
Ensembl chr 1:117,198,289...117,199,284
JBrowse link
G MASP1 MBL associated serine protease 1 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chr34:19,689,426...19,750,669
Ensembl chr34:19,691,630...19,750,587
JBrowse link
G MASP2 MBL associated serine protease 2 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chr 2:84,976,366...84,987,376
Ensembl chr 2:84,976,456...84,989,797
JBrowse link
G MBL1 mannose binding lectin 1 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chr 4:29,419,886...29,424,377 JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3042099|PMID:12719478) MGI PMID:12719478 MGI:3042099 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3528769|PMID:15690042) Ensembl
MGI
PMID:15690042 GO_REF:0000107 MGI:3528769 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639
JBrowse link
G MIR19A microRNA mir-19a involved_in ISO (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr22:42,478,298...42,478,355
Ensembl chr22:42,478,285...42,478,366
JBrowse link
G MIR19B-1 microRNA mir-19b-1 involved_in ISO (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr22:42,478,598...42,478,656 JBrowse link
G MIR19B-2 microRNA mir-19b-2 involved_in ISO (PMID:22105995) ARUK-UCL PMID:22105995 NCBI chr  X:104,895,962...104,896,025
Ensembl chr  X:104,895,962...104,896,025
JBrowse link
G TIRAP TIR domain containing adaptor protein acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chr 5:8,222,217...8,237,595
Ensembl chr 5:8,221,794...8,226,074
JBrowse link
G TLR1 toll like receptor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:73,504,359...73,544,822
Ensembl chr 3:73,539,715...73,544,624
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G TLR6 toll like receptor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:73,504,357...73,523,964
Ensembl chr 3:73,520,706...73,523,099
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,790,505...35,792,967 JBrowse link
G CD36 CD36 molecule involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639
JBrowse link
G MIR105A microRNA mir-105a involved_in ISO (PMID:19509287) ARUK-UCL PMID:19509287 NCBI chr  X:120,403,195...120,403,275
Ensembl chr  X:120,403,195...120,403,275
JBrowse link
G MIR105B microRNA mir-105b involved_in ISO (PMID:19509287) ARUK-UCL PMID:19509287 NCBI chr  X:120,405,349...120,405,428
Ensembl chr  X:120,405,349...120,405,428
JBrowse link
G TLR2 toll like receptor 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:19931471) UniProt
Ensembl
UniProt
MGI
PMID:19931471 GO_REF:0000024 GO_REF:0000107 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107
G TLR6 toll like receptor 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:19931471)
(PMID:21873635)
MGI
GO_Central
PMID:19931471 PMID:21873635 NCBI chr 3:73,504,357...73,523,964
Ensembl chr 3:73,520,706...73,523,099
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727
JBrowse link
G CDA cytidine deaminase ISO K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 2:78,305,328...78,327,229
Ensembl chr 2:78,304,726...78,327,247
JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chr22:30,545,991...30,557,199
Ensembl chr22:30,547,271...30,555,510
JBrowse link
G ACTG1 actin gamma 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 9:635,978...638,328
Ensembl chr 9:635,978...638,328
JBrowse link
G ACTR2 actin related protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr10:64,696,068...64,733,027
Ensembl chr10:64,696,111...64,730,553
JBrowse link
G ACTR3 actin related protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr19:35,097,968...35,133,330
Ensembl chr19:35,098,639...35,169,724
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chr 9:49,839,252...49,867,295
Ensembl chr 9:49,839,252...49,867,295
JBrowse link
G AIF1 allograft inflammatory factor 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:1,104,350...1,106,179
Ensembl chr12:1,104,394...1,106,177
JBrowse link
G AQP4 aquaporin 4 involved_in ISO (PMID:17645239) UniProt PMID:17645239 NCBI chr 7:61,855,617...61,868,953
Ensembl chr 7:61,855,744...61,865,089
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402
JBrowse link
G ASL argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G ASS1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G CAPG capping actin protein, gelsolin like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:39,619,429...39,640,944
Ensembl chr17:39,619,248...39,640,942
JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:38,931,895...38,936,969
Ensembl chr 9:38,933,514...38,961,187
JBrowse link
G CCL13 chemokine (C-C motif) ligand 13 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:38,938,944...38,940,231
Ensembl chr 9:38,938,135...38,940,231
JBrowse link
G CCL14 C-C motif chemokine ligand 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,782,912...37,785,669
Ensembl chr 9:37,782,933...37,785,531
JBrowse link
G CCL17 C-C motif chemokine ligand 17 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:59,001,463...59,014,347
Ensembl chr 2:59,001,464...59,005,230
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:51,357,706...51,359,207
Ensembl chr11:51,340,530...51,359,365
JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISO (MGI:3699670|PMID:14662900)
(PMID:9407497)
RGD
BHF-UCL
UniProt
PMID:9407497 PMID:14512159 PMID:14662900 MGI:3699670 RGD:8548859 NCBI chr 9:39,008,187...39,009,932 JBrowse link
G CCL22 C-C motif chemokine ligand 22 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:59,039,650...59,045,519
Ensembl chr 2:59,040,539...59,045,625
JBrowse link
G CCL23 chemokine (C-C motif) ligand 23 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,763,342...37,767,011 JBrowse link
G CCL24 C-C motif chemokine ligand 24 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:7,166,165...7,179,606
Ensembl chr 6:7,166,479...7,180,051
JBrowse link
G CCL25 C-C motif chemokine ligand 25 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:52,689,674...52,722,291
Ensembl chr20:52,712,979...52,722,018
JBrowse link
G CCL26 C-C motif chemokine ligand 26 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:7,151,352...7,154,509
Ensembl chr 6:7,151,212...7,154,726
JBrowse link
G CCL3 chemokine (C-C motif) ligand 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:37,693,711...37,695,137
Ensembl chr 9:37,686,480...37,695,573
JBrowse link
G CCL4 chemokine (C-C motif) ligand 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:37,681,342...37,682,691
Ensembl chr 9:37,676,966...37,710,209
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G CCL7 C-C motif chemokine ligand 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:38,994,638...38,996,103
Ensembl chr 9:38,993,911...39,010,483
JBrowse link
G CCL8 C-C motif chemokine ligand 8 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:38,949,184...38,950,702
Ensembl chr 9:38,948,184...38,950,803
JBrowse link
G CD47 CD47 molecule involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr33:13,315,984...13,362,971
Ensembl chr33:13,319,266...13,363,580
JBrowse link
G CD58 CD58 molecule involved_in ISO (PMID:19109405) UniProt PMID:19109405 NCBI chr17:53,969,207...53,997,306
Ensembl chr17:53,973,029...53,995,672
JBrowse link
G CDC42EP2 CDC42 effector protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr18:51,854,975...51,863,594
Ensembl chr18:51,857,367...51,858,011
JBrowse link
G CDC42EP4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 9:6,888,183...6,909,986
Ensembl chr 9:6,907,205...6,964,626
JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr38:2,878,677...2,956,226 JBrowse link
G CIITA class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820
JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chr34:22,303,058...22,319,101
Ensembl chr34:22,303,850...22,319,033
JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:59,022,794...59,032,095
Ensembl chr 2:59,022,794...59,032,095
JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:72,278,939...72,448,907
Ensembl chr 1:72,280,103...72,447,822
JBrowse link
G DAPK3 death associated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,590,199...55,603,883
Ensembl chr20:55,590,223...55,602,682
JBrowse link
G DAXX death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chr12:2,755,960...2,760,687
Ensembl chr12:2,755,960...2,761,340
JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:5466658|PMID:23071094)
(PMID:15479637)
MGI
UniProt
PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr38:14,754,628...14,823,626
Ensembl chr38:14,754,632...14,823,621
JBrowse link
G EVL Enah/Vasp-like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 8:68,352,717...68,461,684
Ensembl chr 8:68,352,853...68,484,269
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G FASLG Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chr 7:26,335,837...26,344,224
Ensembl chr 7:26,335,846...26,344,224
JBrowse link
G FCAR Fc fragment of IgA receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr 1:102,709,675...102,720,680 JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr20:32,394,755...32,533,440
Ensembl chr20:32,396,165...32,533,275
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chr27:38,468,889...38,472,653
Ensembl chr27:38,468,889...38,472,385
JBrowse link
G GBP1 guanylate binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:4412460|PMID:18025219)
(PMID:21873635)
MGI
GO_Central
PMID:18025219 PMID:21873635 MGI:4412460 NCBI chr 6:59,378,069...59,393,388
Ensembl chr 6:59,273,592...59,393,229
JBrowse link
G GBP5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4412460|PMID:18025219)
GO_Central
MGI
PMID:18025219 PMID:21873635 MGI:4412460 NCBI chr 6:59,273,699...59,292,563
Ensembl chr 6:59,273,592...59,393,229
JBrowse link
G GBP6 guanylate binding protein family member 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4412460|PMID:18025219)
GO_Central
MGI
PMID:18025219 PMID:21873635 MGI:4412460 NCBI chr 6:59,150,665...59,170,070
Ensembl chr 6:59,158,855...59,169,646
JBrowse link
G GSN gelsolin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chr20:50,818,715...50,827,914
Ensembl chr20:50,818,715...50,827,914
JBrowse link
G IL12B interleukin 12B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 4:51,178,637...51,194,606
Ensembl chr 4:51,183,568...51,193,228
JBrowse link
G IL12RB1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chr20:44,885,410...44,908,139
Ensembl chr20:44,885,337...44,904,538
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chr 5:20,972,742...20,995,327
Ensembl chr 5:20,972,871...20,995,348
JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,789,264...66,812,477
Ensembl chr 5:66,791,350...66,842,179
JBrowse link
G KIF16B kinesin family member 16B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr24:6,260,558...6,576,544
Ensembl chr24:6,261,553...6,575,845
JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 2:14,835,906...14,880,896
Ensembl chr 2:14,835,901...14,878,251
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chr 9:42,154,613...42,170,423
Ensembl chr 9:42,154,702...42,170,391
JBrowse link
G LOC403934 cell division cycle 42 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G LOC480600 chemokine (C-C motif) ligand 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,708,561...37,710,209
Ensembl chr 9:37,676,966...37,710,209
JBrowse link
G LOC480601 regakine-1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,734,551...37,740,058 JBrowse link
G LOC606863 immunity-related GTPase family M protein-like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829
JBrowse link
G MRC1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chr 2:19,090,580...19,185,943
Ensembl chr 2:19,069,120...19,185,691
JBrowse link
G MST1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chr20:39,582,237...39,586,958
Ensembl chr20:39,582,282...39,586,908
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G MYO18A myosin XVIIIA acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 9:43,226,170...43,325,026
Ensembl chr 9:43,227,187...43,322,545
JBrowse link
G MYO1C myosin IC acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 9:45,635,295...45,658,226
Ensembl chr 9:45,636,208...45,658,035
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4412460|PMID:18025219) Ensembl
Ensembl
MGI
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chr 9:12,166,124...12,219,553
Ensembl chr 9:12,166,775...12,219,778
JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:49,735,511...49,772,228
Ensembl chr17:49,735,097...49,803,741
JBrowse link
G RAB12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 7:74,752,697...74,791,872 JBrowse link
G RAB20 RAB20, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr22:58,825,147...58,853,921
Ensembl chr22:58,825,667...58,853,667
JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr20:2,979,094...3,020,496
Ensembl chr20:2,978,727...3,011,715
JBrowse link
G RAB7B RAB7B, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr38:2,333,939...2,359,531
Ensembl chr38:2,335,535...2,359,469
JBrowse link
G RPL13A ribosomal protein L13a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,010,190...107,014,267
Ensembl chr 1:107,010,190...107,014,267
JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,387,084...34,590,603
Ensembl chr 9:34,387,091...34,425,292
JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr24:19,094,930...19,136,655 JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chr 6:31,511,003...31,511,995
Ensembl chr 6:31,509,268...31,511,557
JBrowse link
G SOCS3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chr 9:2,859,267...2,859,944 JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178
JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 1:35,600,440...35,645,421
Ensembl chr 1:35,601,133...35,644,819
JBrowse link
G STX4 syntaxin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370
JBrowse link
G STX8 syntaxin 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 5:33,834,218...34,091,827
Ensembl chr 5:33,834,279...34,091,757
JBrowse link
G STXBP1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G STXBP2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr20:52,413,174...52,421,525
Ensembl chr20:52,413,191...52,421,517
JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828867|PMID:19144319) Ensembl
MGI
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 6:42,947,639...42,998,297
Ensembl chr 6:42,948,236...43,053,027
JBrowse link
G STXBP4 syntaxin binding protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 9:30,079,797...30,293,750
Ensembl chr 9:30,092,289...30,236,135
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,613,947...45,644,879
Ensembl chr12:45,618,234...45,644,778
JBrowse link
G TDGF1 teratocarcinoma-derived growth factor 1 involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chr20:42,137,939...42,140,590 JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107
G TLR3 toll like receptor 3 NOT ISO intestinal epithelial cells
thyrocytes
RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chr16:44,617,012...44,633,591
Ensembl chr16:44,550,846...44,653,247
JBrowse link
G TLR4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:16525716 RGD:14985246 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G VAMP3 vesicle associated membrane protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 5:61,430,711...61,440,626
Ensembl chr 5:61,430,740...61,439,063
JBrowse link
G VAMP4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 7:27,278,200...27,303,499
Ensembl chr 7:27,278,231...27,302,225
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:39,497,628...39,501,734
Ensembl chr17:39,497,785...39,501,739
JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466
JBrowse link
G VPS26B VPS26, retromer complex component B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 5:1,000,035...1,020,195
Ensembl chr 5:999,392...1,020,196
JBrowse link
G WAS WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr  X:41,882,240...41,890,053
Ensembl chr  X:41,882,875...41,890,058
JBrowse link
G WNT5A Wnt family member 5A involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G ZYX zyxin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr16:6,304,163...6,313,923 JBrowse link
cellular response to lectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:2200903 RGD:10059628 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chr 5:70,054,683...70,233,459
Ensembl chr 5:70,059,255...70,207,049
JBrowse link
G SYK spleen associated tyrosine kinase involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chr 1:95,903,501...95,955,577
Ensembl chr 1:95,903,566...95,955,583
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:60,761,669...60,869,753
Ensembl chr11:60,761,655...60,890,496
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727
JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chr28:12,670,885...12,740,124
Ensembl chr28:12,670,885...12,740,740
JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:82358|PMID:8806812) MGI PMID:8806812 MGI:82358 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G ACOD1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,545,991...30,557,199
Ensembl chr22:30,547,271...30,555,510
JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chr16:26,413,345...26,551,293
Ensembl chr16:26,414,583...26,551,122
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chr 9:49,839,252...49,867,295
Ensembl chr 9:49,839,252...49,867,295
JBrowse link
G AICDA activation induced cytidine deaminase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3817382|PMID:18762567) MGI
Ensembl
PMID:18762567 GO_REF:0000107 MGI:3817382 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G AKAP8 A-kinase anchoring protein 8 involved_in ISO (MGI:5763364|PMID:19531803) UniProt PMID:19531803 MGI:5763364 NCBI chr20:46,800,917...46,817,397
Ensembl chr20:46,800,872...46,817,397
JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr28:5,569,120...5,578,393
Ensembl chr28:5,569,501...5,601,956
JBrowse link
G ARG1 arginase 1 ISO RGD PMID:9013624 RGD:4144055 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402
JBrowse link
G ARID5A AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) UniProt PMID:27671645 MGI:5887181 NCBI chr17:34,320,791...34,333,660
Ensembl chr17:34,321,177...34,333,621
JBrowse link
G ASS1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in ISO (PMID:19657094) UniProt PMID:19657094 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960
JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr30:11,331,574...11,337,991
Ensembl chr30:11,331,569...11,337,997
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:62,712,937...62,723,852
Ensembl chr 6:62,712,971...62,722,368
JBrowse link
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (MGI:71493|PMID:7889565) MGI PMID:7889565 MGI:71493 NCBI chr26:27,856,280...27,980,923
Ensembl chr26:27,856,082...27,978,318
JBrowse link
G BPI bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr24:26,772,410...26,800,763
Ensembl chr24:26,767,746...26,800,762
JBrowse link
G BYSL bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chr12:10,580,881...10,592,313
Ensembl chr12:10,581,217...10,591,923
JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chr20:55,803,494...55,817,467
Ensembl chr20:55,803,530...55,816,549
JBrowse link
G CAMP cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G CAPN2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chr 7:40,333,379...40,367,158
Ensembl chr 7:40,334,012...40,377,037
JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISO (MGI:3699670|PMID:14662900) RGD
BHF-UCL
PMID:8921263 PMID:14662900 MGI:3699670 RGD:8549522 NCBI chr 9:39,008,187...39,009,932 JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr25:40,506,385...40,509,903
Ensembl chr25:40,506,753...40,509,709
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G CCR5 C-C motif chemokine receptor 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:42,293,288...42,297,952
Ensembl chr20:42,294,996...42,297,952
JBrowse link
G CD14 CD14 molecule involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:12594207) RGD
Ensembl
MGI
PMID:12594207 PMID:22511970 GO_REF:0000107 RGD:7183752 NCBI chr 2:35,790,505...35,792,967 JBrowse link
G CD180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1860539|PMID:10880523)
GO_Central
Ensembl
MGI
PMID:10880523 PMID:21873635 GO_REF:0000107 MGI:1860539 NCBI chr 2:52,644,357...52,660,830
Ensembl chr 2:52,645,766...52,660,790
JBrowse link
G CD274 CD274 molecule involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:93,461,735...93,605,772
Ensembl chr 1:93,585,518...93,603,522
JBrowse link
G CD36 CD36 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3587138|PMID:16061696) Ensembl
Ensembl
MGI
PMID:16061696 GO_REF:0000107 MGI:3587138 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301
JBrowse link
G CD68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chr 5:32,500,899...32,503,355
Ensembl chr 5:32,501,380...32,503,183
JBrowse link
G CD80 CD80 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3828894|PMID:19047410)
GO_Central
GO_Central
MGI
PMID:19047410 PMID:21873635 MGI:3828894 NCBI chr33:23,177,136...23,208,421
Ensembl chr33:23,177,138...23,201,380
JBrowse link
G CD86 CD86 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3828894|PMID:19047410)
GO_Central
GO_Central
MGI
RGD
PMID:19047410 PMID:21039614 PMID:21873635 MGI:3828894 RGD:4892198 NCBI chr33:25,256,267...25,318,855
Ensembl chr33:25,256,267...25,318,087
JBrowse link
G CDC73 cell division cycle 73 involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chr38:5,826,209...5,937,930
Ensembl chr38:5,805,916...5,938,111
JBrowse link
G CDK19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chr12:67,227,374...67,369,481
Ensembl chr12:67,231,463...67,327,084
JBrowse link
G CDK4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (MGI:78049|PMID:8543804) MGI PMID:8543804 MGI:78049 NCBI chr10:1,812,864...1,815,815
Ensembl chr10:1,812,886...1,815,789
JBrowse link
G CEBPB CCAAT enhancer binding protein beta ISO RGD PMID:18405661 RGD:10401220 NCBI chr24:36,661,294...36,663,162
Ensembl chr24:36,661,616...36,662,656
JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chr 8:3,423,046...3,425,595
Ensembl chr 8:3,423,040...3,425,217
JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr38:2,878,677...2,956,226 JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:50,363,488...50,376,081 JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (MGI:73245|PMID:7751651) MGI PMID:7751651 MGI:73245 NCBI chr17:4,466,615...4,478,546 JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chr 3:54,405,140...54,499,614
Ensembl chr 3:54,405,717...54,500,221
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chr11:20,342,880...20,346,959
Ensembl chr11:20,344,648...20,346,959
JBrowse link
G CSF3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chr 9:22,529,643...22,532,326
Ensembl chr 9:22,530,698...22,533,108
JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr21:33,915,804...33,949,597
Ensembl chr21:33,915,772...33,949,103
JBrowse link
G CTSG cathepsin G involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr 8:4,483,327...4,485,933
Ensembl chr 8:4,470,577...4,512,628
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:6162390|PMID:23499256) RGD
ARUK-UCL
PMID:10422773 PMID:23499256 MGI:6162390 RGD:4892028 NCBI chr23:8,937,069...8,954,738
Ensembl chr23:8,938,906...8,952,808
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(PMID:23776175)
GO_Central
Ensembl
GO_Central
MGI
PMID:21873635 PMID:23776175 GO_REF:0000107 NCBI chr32:598,406...599,925
Ensembl chr32:597,987...599,979
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:2,047,277...2,053,277
Ensembl chr32:2,047,315...2,052,833
JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chr 5:31,816,889...31,820,975
Ensembl chr 5:31,816,667...31,820,840
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
Ensembl
GO_Central
RGD
Ensembl
PMID:21873635 PMID:31442273 GO_REF:0000107 RGD:150540302 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr30:37,474,997...37,487,028
Ensembl chr30:37,473,901...37,487,507
JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr28:15,292,959...15,298,896
Ensembl chr28:15,293,106...15,298,852
JBrowse link
G DAB2IP DAB2 interacting protein involved_in ISO (MGI:4453088|PMID:19948740)
(PMID:19948740)
UniProt PMID:19948740 MGI:4453088 NCBI chr 9:60,725,887...60,918,242
Ensembl chr 9:60,726,809...60,918,139
JBrowse link
G EDNRB endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chr22:31,415,324...31,438,772
Ensembl chr22:31,417,308...31,437,587
JBrowse link
G EFNB2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr22:55,567,992...55,609,210
Ensembl chr22:55,566,039...55,609,443
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chr 9:48,589,408...48,594,852
Ensembl chr 9:48,570,891...48,594,452
JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chr10:48,550,836...48,636,776
Ensembl chr10:48,551,410...48,634,844
JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
JBrowse link
G FCAR Fc fragment of IgA receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr 1:102,709,675...102,720,680 JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chr38:20,980,777...20,994,403 JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chr37:22,456,854...22,522,410
Ensembl chr37:22,420,428...22,523,123
JBrowse link
G FUBP1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chr 6:68,923,215...68,963,766 JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chr  X:41,991,321...41,998,319
Ensembl chr  X:41,971,582...41,998,303
JBrowse link
G GFER growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chr 6:38,948,927...38,951,300
Ensembl chr 6:38,949,484...38,951,703
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20547752) Ensembl
Ensembl
UniProt
PMID:20547752 GO_REF:0000107 NCBI chr 6:56,473,032...56,484,422
Ensembl chr 6:56,256,305...56,484,422
JBrowse link
G GHSR growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chr34:36,691,132...36,694,304
Ensembl chr34:36,690,224...36,694,312
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in ISO (MGI:6478067|PMID:32460388) UniProt PMID:32460388 MGI:6478067 NCBI chr 9:43,676,707...43,686,566
Ensembl chr 9:43,677,899...43,693,177
JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chr 4:35,927,470...35,943,218
Ensembl chr 4:35,913,472...35,943,221
JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chr18:49,905,161...49,908,182
Ensembl chr18:49,905,161...49,908,182
JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO (MGI:6437701|PMID:32513690) MGI PMID:32513690 MGI:6437701 NCBI chr17:20,355,778...20,399,869 JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chr 1:117,305,531...117,306,587
Ensembl chr 1:117,305,411...117,306,619
JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:53,018,990...53,032,035
Ensembl chr 4:53,012,234...53,033,393
JBrowse link
G HDAC5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chr 9:19,261,075...19,297,669
Ensembl chr 9:19,260,893...19,297,623
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
G HMGB2 high mobility group box 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr25:23,939,024...23,941,720
Ensembl chr25:23,939,027...23,941,606
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chr17:56,679,942...56,698,521
Ensembl chr17:56,680,301...56,698,419
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chr20:52,993,934...53,034,608
Ensembl chr20:52,993,824...53,034,606
JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chr13:37,724,741...37,745,259
Ensembl chr13:37,724,759...37,745,252
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chr20:50,818,715...50,827,914
Ensembl chr20:50,818,715...50,827,914
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) MGI PMID:18791161 MGI:3821815 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IL10 interleukin 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717) MGI
Ensembl
Ensembl
PMID:19047410 PMID:21609717 GO_REF:0000107 MGI:3828894 MGI:5013871 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057
JBrowse link
G IL12A interleukin 12A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3828894|PMID:19047410) Ensembl
MGI
PMID:19047410 GO_REF:0000107 MGI:3828894 NCBI chr34:26,125,529...26,133,546
Ensembl chr34:26,124,770...26,133,550
JBrowse link
G IL12B interleukin 12B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) MGI
Ensembl
PMID:18025219 PMID:21606371 GO_REF:0000107 MGI:4412460 MGI:5013875 NCBI chr 4:51,178,637...51,194,606
Ensembl chr 4:51,183,568...51,193,228
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chr 5:20,972,742...20,995,327
Ensembl chr 5:20,972,871...20,995,348
JBrowse link
G IL1A interleukin 1 alpha involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:36,969,581...36,979,445
Ensembl chr17:36,970,573...36,979,435
JBrowse link
G IL1B interleukin 1 beta involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:21873635 PMID:23200736 RGD:7175528 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458
JBrowse link
G IL1F10 interleukin 1 family member 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,192,357...37,202,519
Ensembl chr17:37,192,175...37,202,044
JBrowse link
G IL24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chr 7:6,043,249...6,047,097
Ensembl chr 7:6,041,625...6,047,097
JBrowse link
G IL36B interleukin 36 beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,159,276...37,165,841
Ensembl chr17:37,159,434...37,165,423
JBrowse link
G IL36G interleukin 36 gamma involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,100,557...37,148,402
Ensembl chr17:37,144,309...37,149,400
JBrowse link
G IL36RN interleukin 36 receptor antagonist involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:37,184,527...37,190,094
Ensembl chr17:37,184,801...37,189,018
JBrowse link
G IL37 interleukin 37 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:36,964,857...37,101,005
Ensembl chr17:36,977,063...37,100,801
JBrowse link
G IL6 interleukin 6 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371)
(PMID:23776175)
RGD
Ensembl
MGI
PMID:2789217 PMID:19047410 PMID:21606371 PMID:23776175 GO_REF:0000107 MGI:3828894 MGI:5013875 RGD:11049548 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519
JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15793310 PMID:21873635 RGD:1579809 NCBI chr  X:121,853,340...121,862,582
Ensembl chr  X:121,819,432...121,862,576
JBrowse link
G IRF3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chr 1:106,875,016...106,879,065
Ensembl chr 1:106,875,118...106,879,065
JBrowse link
G IRF8 interferon regulatory factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3653161|PMID:9348310) MGI
Ensembl
PMID:9348310 GO_REF:0000107 MGI:3653161 NCBI chr 5:66,789,264...66,812,477
Ensembl chr 5:66,791,350...66,842,179
JBrowse link
G JAK2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chr 1:93,321,055...93,438,898
Ensembl chr 1:93,142,635...93,435,997
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G KLRK1 killer cell lectin like receptor K1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3028810|PMID:14764662) Ensembl
Ensembl
MGI
PMID:14764662 GO_REF:0000107 MGI:3028810 NCBI chr27:35,634,938...35,658,978
Ensembl chr27:35,639,280...35,658,882
JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541
JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chr 9:55,328,118...55,342,535
Ensembl chr 9:55,328,133...55,332,038
JBrowse link
G LDOC1 LDOC1 regulator of NFKB signaling involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:111,065,937...111,067,337
Ensembl chr  X:111,066,055...111,066,498
JBrowse link
G LITAF lipopolysaccharide induced TNF factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3687609|PMID:16954198) MGI
Ensembl
Ensembl
PMID:16954198 GO_REF:0000107 MGI:3687609 NCBI chr 6:31,229,153...31,259,670 JBrowse link
G LOC100686711 CMRF35-like molecule 7 acts_upstream_of_or_within ISO (MGI:5446972|PMID:22772446) MGI PMID:22772446 MGI:5446972 NCBI chr 9:5,916,954...5,926,811 JBrowse link
G LOC106557449 alveolar macrophage chemotactic factor-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:62,514,244...62,516,439
Ensembl chr13:62,513,898...62,515,218
JBrowse link
G LOC478984 low affinity immunoglobulin gamma Fc region receptor III ISO RGD PMID:19106808 RGD:5147925 NCBI chr38:21,054,870...21,060,948 JBrowse link
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617
JBrowse link
G LOC485869 lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in
ISO (PMID:12594207)
(PMID:24120359)
(MGI:5645195|PMID:24380872)
MGI
UniProt
PMID:12594207 PMID:24120359 PMID:24380872 MGI:5645195 NCBI chr24:26,810,369...26,833,515
Ensembl chr24:26,809,843...26,833,434
JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chr11:1,893,927...1,897,028
Ensembl chr11:1,894,380...1,897,752
JBrowse link
G LY96 lymphocyte antigen 96 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:22,493,757...22,515,147
Ensembl chr29:22,493,896...22,515,117
JBrowse link
G MALT1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16831874) UniProt PMID:16831874 NCBI chr 1:17,351,458...17,412,591
Ensembl chr 1:17,354,926...17,403,927
JBrowse link
G MAP2K3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chr 5:42,732,751...42,762,420
Ensembl chr 5:42,700,836...42,761,736
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,594,450...52,604,236
Ensembl chr20:52,594,536...52,602,150
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chr12:5,145,647...5,221,558
Ensembl chr12:5,146,037...5,220,603
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chr11:1,443,528...1,480,501
Ensembl chr11:1,443,547...1,478,119
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852
JBrowse link
G MIR107 microRNA mir-107 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr28:4,484,653...4,484,710
Ensembl chr28:4,484,646...4,484,718
JBrowse link
G MIR10A microRNA mir-10a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:24,842,171...24,842,233
Ensembl chr 9:24,842,145...24,842,248
JBrowse link
G MIR125A microRNA mir-125a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:105,400,273...105,400,332
Ensembl chr 1:105,400,270...105,400,337
JBrowse link
G MIR128-1 microRNA mir-128-1 involved_in ISO (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr19:38,435,956...38,436,011 JBrowse link
G MIR128-2 microRNA mir-128-2 involved_in ISO (PMID:24415783) BHF-UCL PMID:24415783 NCBI chr23:5,826,463...5,826,520
Ensembl chr23:5,826,449...5,826,532
JBrowse link
G MIR139 microRNA mir-139 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr21:25,597,025...25,597,081
Ensembl chr21:25,597,024...25,597,080
JBrowse link
G MIR140 microRNA mir-140 acts_upstream_of_or_within
involved_in
ISO (MGI:3817382|PMID:18762567)
(PMID:30321456)
MGI
ARUK-UCL
PMID:18762567 PMID:30321456 MGI:3817382 NCBI chr 5:79,814,256...79,814,316
Ensembl chr 5:79,814,246...79,814,326
JBrowse link
G MIR142 microRNA mir-142 acts_upstream_of_or_within ISO (MGI:5013506|PMID:21536037) MGI PMID:21536037 MGI:5013506 NCBI chr 9:32,977,393...32,977,455
Ensembl chr 9:32,977,382...32,977,468
JBrowse link
G MIR146B microRNA mir-146b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr28:14,940,550...14,940,610
Ensembl chr28:14,940,550...14,940,610
JBrowse link
G MIR147 microRNA mir-147 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr30:11,800,621...11,800,706
Ensembl chr30:11,800,621...11,800,706
JBrowse link
G MIR150 microRNA mir-150 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 1:106,998,756...106,998,812
Ensembl chr 1:106,998,756...106,998,812
JBrowse link
G MIR155 microRNA mir-155 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr31:21,078,768...21,078,828
Ensembl chr31:21,078,758...21,078,833
JBrowse link
G MIR15A microRNA mir-15a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr22:1,846,880...1,846,938
Ensembl chr22:1,846,866...1,846,960
JBrowse link
G MIR16-2 microRNA mir-16-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr34:26,460,807...26,460,871
Ensembl chr34:26,460,807...26,460,871
JBrowse link
G MIR181A-1 microRNA mir-181a-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 7:4,055,465...4,055,526
Ensembl chr 7:4,055,465...4,055,526
JBrowse link
G MIR181A-2 microRNA mir-181a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:58,302,547...58,302,606
Ensembl chr 9:58,302,547...58,302,606
JBrowse link
G MIR181B-2 microRNA mir-181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 9:58,301,314...58,301,373
Ensembl chr 9:58,301,300...58,301,388
JBrowse link
G MIR181C microRNA mir-181c acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr20:48,593,343...48,593,403
Ensembl chr20:48,593,325...48,593,421
JBrowse link
G MIR184 microRNA mir-184 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 3:57,914,444...57,914,511
Ensembl chr 3:57,914,444...57,914,511
JBrowse link
G MIR187 microRNA mir-187 involved_in ISO (PMID:23071313) ARUK-UCL PMID:23071313 NCBI chr 7:54,261,943...54,262,010
Ensembl chr 7:54,261,943...54,262,010
JBrowse link
G MIR193A microRNA mir-193a acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 9:41,316,481...41,316,536
Ensembl chr 9:41,316,474...41,316,542
JBrowse link
G MIR194 microRNA mir-194 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr38:14,895,401...14,895,458
Ensembl chr38:14,895,401...14,895,458
JBrowse link
G MIR199-1 microRNA mir-199-1 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr20:50,410,924...50,410,984
Ensembl chr20:50,410,913...50,410,994
JBrowse link
G MIR199-2 microRNA mir-199-2 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 7:26,812,766...26,812,824
Ensembl chr 7:26,812,735...26,812,838
JBrowse link
G MIR200C microRNA mir-200c acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr27:38,082,097...38,082,159
Ensembl chr27:38,082,091...38,082,169
JBrowse link
G MIR205 microRNA mir-205 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 7:8,090,511...8,090,579
Ensembl chr 7:8,090,511...8,090,579
JBrowse link
G MIR21 microRNA mir-21 involved_in ISO (PMID:19946272)
(PMID:29039542)
RGD
BHF-UCL
ARUK-UCL
PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624
JBrowse link
G MIR217 microRNA mir-217 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr10:56,754,566...56,754,647
Ensembl chr10:56,754,566...56,754,647
JBrowse link
G MIR223 microRNA mir-223 involved_in
acts_upstream_of_or_within
ISO (PMID:34637033)
(MGI:3817382|PMID:18762567), (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879)
RGD
BHF-UCL
MGI
PMID:18762567 PMID:18791161 PMID:21247879 PMID:29707878 PMID:34637033 MGI:3817382 MGI:3821815 MGI:5050043 RGD:25823197 NCBI chr  X:50,838,131...50,838,233
Ensembl chr  X:50,838,131...50,838,233
JBrowse link
G MIR224 microRNA mir-224 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI
RNAcentral
PMID:18762567 PMID:21247879 GO_REF:0000115 MGI:3817382 MGI:5050043 NCBI chr  X:119,925,345...119,925,413
Ensembl chr  X:119,925,345...119,925,413
JBrowse link
G MIR23B microRNA mir-23b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:71,678,353...71,678,406
Ensembl chr 1:71,678,346...71,678,416
JBrowse link
G MIR24-1 microRNA mir-24-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:71,677,608...71,677,669
Ensembl chr 1:71,677,608...71,677,669
JBrowse link
G MIR24-2 microRNA mir-24-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr20:48,620,684...48,620,745
Ensembl chr20:48,620,674...48,620,745
JBrowse link
G MIR26A-1 microRNA mir-26a-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr23:7,747,073...7,747,133
Ensembl chr23:7,747,064...7,747,140
JBrowse link
G MIR26A-2 microRNA mir-26a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr10:1,880,513...1,880,572
Ensembl chr10:1,880,513...1,880,572
JBrowse link
G MIR26B microRNA mir-26b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr37:25,054,488...25,054,543 JBrowse link
G MIR27A microRNA mir-27a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr20:48,620,556...48,620,615
Ensembl chr20:48,620,556...48,620,615
JBrowse link
G MIR29A microRNA mir-29a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr14:6,184,844...6,184,903
Ensembl chr14:6,184,830...6,184,916
JBrowse link
G MIR29B-1 microRNA mir-29b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr14:6,184,457...6,184,521
Ensembl chr14:6,184,446...6,184,531
JBrowse link
G MIR29B-2 microRNA mir-29b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 7:6,651,878...6,651,943
Ensembl chr 7:6,651,866...6,651,955
JBrowse link
G MIR30B microRNA mir-30b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr13:30,906,038...30,906,097
Ensembl chr13:30,906,038...30,906,097
JBrowse link
G MIR30C-1 microRNA mir-30c-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr15:2,280,050...2,280,110
Ensembl chr15:2,280,039...2,280,121
JBrowse link
G MIR30C-2 microRNA mir-30c-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr12:33,757,899...33,757,960
Ensembl chr12:33,757,890...33,757,969
JBrowse link
G MIR30D microRNA mir-30d acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr13:30,910,306...30,910,365
Ensembl chr13:30,910,306...30,910,365
JBrowse link
G MIR323 microRNA mir-323 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 8:69,257,494...69,257,549
Ensembl chr 8:69,257,479...69,257,564
JBrowse link
G MIR342 microRNA mir-342 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) MGI
RNAcentral
PMID:18762567 PMID:21247879 GO_REF:0000115 MGI:3817382 MGI:5050043 NCBI chr 8:68,424,656...68,424,718 JBrowse link
G MIR345 microRNA mir-345 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 8:68,592,447...68,592,506 JBrowse link
G MIR381 microRNA mir-381 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 8:69,274,983...69,275,057 JBrowse link
G MIR383 microRNA mir-383 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr16:38,173,722...38,173,783
Ensembl chr16:38,173,693...38,173,803
JBrowse link
G MIR409 microRNA mir-409 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 8:69,293,782...69,293,835 JBrowse link
G MIR425 microRNA mir-425 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr20:40,144,613...40,144,675
Ensembl chr20:40,144,606...40,144,683
JBrowse link
G MIR433 microRNA mir-433 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5050043|PMID:21247879) MGI
RNAcentral
PMID:21247879 GO_REF:0000115 MGI:5050043 NCBI chr 8:69,103,838...69,103,911
Ensembl chr 8:69,103,820...69,103,928
JBrowse link
G MIR486 microRNA mir-486 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr16:23,958,963...23,959,026
Ensembl chr16:23,958,963...23,959,026
JBrowse link
G MIR494 microRNA mir-494 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 8:69,261,385...69,261,465
Ensembl chr 8:69,261,385...69,261,465
JBrowse link
G MIR502 microRNA mir-502 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr  X:42,785,601...42,785,659
Ensembl chr  X:42,785,587...42,785,666
JBrowse link
G MIR7-1 microRNA mir-7-1 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr 1:75,509,765...75,509,828
Ensembl chr 1:75,509,743...75,509,851
JBrowse link
G MIR7-3 microRNA mir-7-3 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) MGI PMID:21247879 MGI:5050043 NCBI chr20:54,993,200...54,993,287
Ensembl chr20:54,993,200...54,993,287
JBrowse link
G MIR98 microRNA mir-98 acts_upstream_of_or_within ISO (MGI:5013871|PMID:21609717) MGI PMID:21609717 MGI:5013871 NCBI chr  X:45,253,693...45,253,772
Ensembl chr  X:45,253,696...45,253,775
JBrowse link
G MIRLET7A-2 microRNA let-7a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 5:12,052,786...12,052,881
Ensembl chr 5:12,052,786...12,052,881
JBrowse link
G MIRLET7G microRNA let-7g acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr20:37,501,074...37,501,152
Ensembl chr20:37,501,054...37,501,160
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293
JBrowse link
G MRC1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chr 2:19,090,580...19,185,943
Ensembl chr 2:19,069,120...19,185,691
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chr23:7,901,578...7,905,274
Ensembl chr23:7,901,250...7,904,534
JBrowse link
G NCL nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chr25:43,330,524...43,384,909
Ensembl chr25:43,330,799...43,384,258
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within
ISO (MGI:6451247|PMID:31786261)
(PMID:23776175)
RGD
MGI
PMID:16842873 PMID:23776175 PMID:31786261 MGI:6451247 RGD:10045666 NCBI chr32:23,948,598...24,040,704
Ensembl chr32:23,942,954...24,040,703
JBrowse link
G NFKBIB NFKB inhibitor beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437182|PMID:20060382) Ensembl
Ensembl
MGI
PMID:20060382 GO_REF:0000107 MGI:4437182 NCBI chr 1:114,206,537...114,217,429
Ensembl chr 1:114,206,534...114,217,644
JBrowse link
G NFKBIL1 NFKB inhibitor like 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:1,048,393...1,057,458
Ensembl chr12:1,049,109...1,057,237
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:251,776...313,290
Ensembl chr 8:253,407...313,059
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219) Ensembl
Ensembl
MGI
RGD
PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107 MGI:3821815 MGI:4412460 RGD:5508737 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (MGI:5009771|PMID:21187453)
(PMID:18511497)
BHF-UCL PMID:18511497 PMID:21187453 MGI:5009771 NCBI chr18:42,333,173...42,346,152
Ensembl chr18:42,333,202...42,341,236
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:5707586|PMID:18972444) UniProt PMID:18972444 MGI:5707586 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116
JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chr25:29,507,198...29,561,565
Ensembl chr25:29,520,921...29,561,349
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502
JBrowse link
G OPRK1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chr29:5,022,270...5,054,223
Ensembl chr29:5,025,786...5,051,919
JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chr21:24,987,568...25,009,754
Ensembl chr21:24,992,848...24,996,059
JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) UniProt PMID:22844456 MGI:5795816 NCBI chr 8:3,580,768...3,585,546
Ensembl chr 8:3,569,399...3,586,070
JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,828,219...113,832,747
Ensembl chr 1:113,828,007...113,832,735
JBrowse link
G PARK7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303
JBrowse link
G PDCD1LG2 programmed cell death 1 ligand 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:93,631,676...93,698,560
Ensembl chr 1:93,631,979...93,689,266
JBrowse link
G PDCD4 programmed cell death 4 involved_in ISO (MGI:4438829|PMID:19946272) BHF-UCL PMID:19946272 MGI:4438829 NCBI chr28:22,198,274...22,227,184
Ensembl chr28:22,198,322...22,226,717
JBrowse link
G PDE2A phosphodiesterase 2A acts_upstream_of_or_within ISO (PMID:21571906) UniProt PMID:21571906 NCBI chr21:25,542,030...25,635,661
Ensembl chr21:25,542,268...25,635,660
JBrowse link
G PDE4B phosphodiesterase 4B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3521611|PMID:15585880) MGI
Ensembl
Ensembl
PMID:15585880 GO_REF:0000107 MGI:3521611 NCBI chr 5:44,063,145...44,606,070
Ensembl chr 5:44,065,106...44,500,999
JBrowse link
G PDE4D phosphodiesterase 4D acts_upstream_of_or_within ISO (MGI:3521611|PMID:15585880) MGI PMID:15585880 MGI:3521611 NCBI chr 2:45,843,767...47,245,263
Ensembl chr 2:45,846,294...46,949,912
JBrowse link
G PLAA phospholipase A2 activating protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:45,121,423...45,159,093
Ensembl chr11:45,121,588...45,159,098
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chr 4:24,329,139...24,333,893
Ensembl chr 4:24,328,925...24,334,851
JBrowse link
G PLSCR1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chr23:41,639,938...41,668,972
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G PLSCR3 phospholipid scramblase 3 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chr 5:32,326,798...32,332,076
Ensembl chr 5:32,327,475...32,331,401
JBrowse link
G PLSCR4 phospholipid scramblase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17590392) Ensembl
Ensembl
UniProt
PMID:17590392 GO_REF:0000107 NCBI chr23:41,415,151...41,453,727
Ensembl chr23:41,415,079...41,450,001
JBrowse link
G PPARD peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chr12:4,492,867...4,579,340
Ensembl chr12:4,492,672...4,579,340
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:62,526,571...62,528,527
Ensembl chr13:62,526,571...62,528,527
JBrowse link
G PRPF8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:17,049,352...17,051,348
Ensembl chr 6:17,049,705...17,051,240
JBrowse link
G RARA retinoic acid receptor alpha involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20547752) Ensembl
Ensembl
UniProt
RGD
PMID:9918814 PMID:15728586 PMID:20547752 GO_REF:0000107 RGD:1580656 RGD:2298880 NCBI chr18:51,550,003...51,558,861
Ensembl chr18:51,550,040...51,558,875
JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176422|PMID:11894098)
(MGI:2176424|PMID:11894097)
MGI
Ensembl
PMID:11894097 PMID:11894098 GO_REF:0000107 MGI:2176422 MGI:2176424 NCBI chr29:35,283,209...35,311,608
Ensembl chr29:35,282,072...35,311,333
JBrowse link
G SBNO2 strawberry notch homolog 2 involved_in ISO (MGI:5660440|PMID:25903009) UniProt PMID:25903009 MGI:5660440 NCBI chr20:57,592,901...57,640,047
Ensembl chr20:57,267,724...57,640,750
JBrowse link
G SELENOS selenoprotein S involved_in ISO (PMID:18675776) BHF-UCL PMID:18675776 NCBI chr 3:39,796,711...39,805,654
Ensembl chr 3:39,796,711...39,805,591
JBrowse link
G SERPINE1 serpin family E member 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:20060032 GO_REF:0000107 RGD:13208812 NCBI chr 6:8,719,547...8,727,160
Ensembl chr 6:8,720,825...8,726,301
JBrowse link
G SGMS1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chr26:37,243,388...37,472,806
Ensembl chr26:37,244,900...37,348,802
JBrowse link
G SHPK sedoheptulokinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:47,445,969...47,486,756 JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chr24:19,094,930...19,136,655 JBrowse link
G SLC12A2 solute carrier family 12 member 2 involved_in ISO (MGI:6451247|PMID:31786261) MGI PMID:31786261 MGI:6451247 NCBI chr11:17,143,943...17,256,248
Ensembl chr11:17,143,943...17,253,695
JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chr 5:65,313,105...65,343,858
Ensembl chr 5:65,313,105...65,343,858
JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chr 6:31,511,003...31,511,995
Ensembl chr 6:31,509,268...31,511,557
JBrowse link
G SPON2 spondin 2 acts_upstream_of_or_within ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chr 3:91,411,245...91,421,245 JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077
JBrowse link
G STAP1 signal transducing adaptor family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,091,457...58,148,902
Ensembl chr13:58,091,477...58,133,711
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
G STAT1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178
JBrowse link
G TBXA2R thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chr20:55,819,866...55,829,395
Ensembl chr20:55,824,410...55,828,980
JBrowse link
G TFPI tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chr36:29,457,131...29,546,455
Ensembl chr36:29,459,371...29,511,310
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chr20:54,948,237...54,961,996
Ensembl chr20:54,959,525...54,961,780
JBrowse link
G TICAM2 toll like receptor adaptor molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)
UniProt PMID:19412184 PMID:22685567 NCBI chr11:5,312,383...5,313,099
Ensembl chr11:5,312,383...5,313,099
JBrowse link
G TLR4 toll like receptor 4 involved_in
acts_upstream_of_or_within
ISO (PMID:30321456)
(MGI:6244743|PMID:28096568)
(MGI:4421230|PMID:20051628), (MGI:5462034|PMID:21880694)
(PMID:11432859)
(MGI:2686801|PMID:14691481)
(MGI:1860539|PMID:10880523)
(MGI:1860539|PMID:10880523), (MGI:5604854|PMID:24740015)
RGD
ARUK-UCL
BHF-UCL
UniProt
MGI
PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:20438866 More... MGI:1860539 MGI:2686801 MGI:4421230 MGI:5462034 MGI:5604854 MGI:6244743 RGD:7777075 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
G TLR5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chr38:23,700,323...23,705,628
Ensembl chr38:23,702,033...23,705,314
JBrowse link
G TLR9 toll like receptor 9 ISO RGD PMID:20655116 PMID:21308757 RGD:5129495 RGD:5130179 NCBI chr20:37,529,322...37,547,117
Ensembl chr20:37,542,340...37,547,114
Ensembl chr20:37,542,340...37,547,114
JBrowse link
G TNF tumor necrosis factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371) RGD
MGI
Ensembl
PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... GO_REF:0000107 MGI:3828894 MGI:4437182 MGI:5013875 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,247,432...30,262,992
Ensembl chr 1:30,251,059...30,261,001
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,140,179...84,151,219
Ensembl chr 2:84,141,911...84,157,191
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:25,883,297...25,909,608
Ensembl chr 7:25,883,251...25,906,892
JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:58,150,734...58,200,158
Ensembl chr 4:58,149,882...58,199,644
JBrowse link
G TNIP2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chr 3:61,511,676...61,535,480 JBrowse link
G TNIP3 TNFAIP3 interacting protein 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr19:18,857,719...18,960,760
Ensembl chr19:18,853,168...18,960,760
JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:26383906 RGD:127284850 NCBI chr12:9,990,678...10,000,195
Ensembl chr12:9,990,679...10,000,236
JBrowse link
G TRIM41 tripartite motif containing 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:414,725...426,074
Ensembl chr11:415,764...425,656
JBrowse link
G TSPO translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chr10:22,388,498...22,399,329
Ensembl chr10:22,274,405...22,399,297
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916
JBrowse link
G VIM vimentin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466
JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chr 1:91,242,010...91,277,030
Ensembl chr 1:91,241,509...91,272,495
JBrowse link
G VWF von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chr27:38,834,812...38,972,614
Ensembl chr27:38,833,837...39,320,142
JBrowse link
G WNT5A Wnt family member 5A involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5605956|PMID:12612580)
(PMID:11460154)
UniProt PMID:11460154 PMID:12612580 MGI:5605956 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:14766228)
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499)
(MGI:5795816|PMID:22844456)
(PMID:14679154), (PMID:15187101)
UniProt PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBD131 beta-defensin 43 involved_in ISO (PMID:26649771) UniProt PMID:26649771 NCBI chr25:25,887,535...25,904,480
Ensembl chr25:25,887,535...25,904,355
JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr25:40,506,385...40,509,903
Ensembl chr25:40,506,753...40,509,709
JBrowse link
G CD14 CD14 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12594207) MGI
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr 2:35,790,505...35,792,967 JBrowse link
G CD36 CD36 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3528769|PMID:15690042)
(MGI:3587138|PMID:16061696)
Ensembl
MGI
Ensembl
PMID:15690042 PMID:16061696 GO_REF:0000107 MGI:3528769 MGI:3587138 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639
JBrowse link
G LOC485869 lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12594207) MGI
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr24:26,810,369...26,833,515
Ensembl chr24:26,809,843...26,833,434
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in ISO (PMID:26649771) UniProt PMID:26649771 NCBI chr12:5,145,647...5,221,558
Ensembl chr12:5,146,037...5,220,603
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:51,550,003...51,558,861
Ensembl chr18:51,550,040...51,558,875
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176422|PMID:11894098) MGI
Ensembl
PMID:11894098 GO_REF:0000107 MGI:2176422 NCBI chr29:35,283,209...35,311,608
Ensembl chr29:35,282,072...35,311,333
JBrowse link
G TIRAP TIR domain containing adaptor protein acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chr 5:8,222,217...8,237,595
Ensembl chr 5:8,221,794...8,226,074
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3528769|PMID:15690042)
(PMID:12594207)
MGI
Ensembl
PMID:12594207 PMID:15690042 GO_REF:0000107 MGI:3528769 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107
G TLR4 toll like receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178646|PMID:10549626) MGI
Ensembl
PMID:10549626 GO_REF:0000107 MGI:2178646 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chr22:30,545,991...30,557,199
Ensembl chr22:30,547,271...30,555,510
JBrowse link
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,790,505...35,792,967 JBrowse link
G CYRIB CYFIP related Rac1 interactor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:26,942,036...27,056,547
Ensembl chr13:26,942,229...27,003,644
JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (MGI:3608295|PMID:12385742) MGI PMID:12385742 MGI:3608295 NCBI chr38:20,980,777...20,994,403 JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567
JBrowse link
G NCAM1 neural cell adhesion molecule 1 ISO RGD PMID:19853610 RGD:2325979 NCBI chr 5:19,895,587...20,192,334
Ensembl chr 5:19,895,613...20,191,995
JBrowse link
G SIRT2 sirtuin 2 involved_in ISO (PMID:23908241) UniProt PMID:23908241 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
JBrowse link
G TNF tumor necrosis factor ISO streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
cellular response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTK Bruton tyrosine kinase ISO RGD PMID:10744701 RGD:1600536 NCBI chr  X:75,270,952...75,302,663
Ensembl chr  X:75,270,979...75,302,562
JBrowse link
G CLEC7A C-type lectin domain containing 7A involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr27:35,852,685...35,885,673
Ensembl chr27:35,853,099...36,007,157
JBrowse link
G CLEC7A C-type lectin domain containing 7A involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr27:35,896,421...35,920,649
Ensembl chr27:35,853,099...36,007,157
JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein involved_in ISO (MGI:5803730|PMID:27288407) UniProt PMID:27288407 MGI:5803730 NCBI chr 5:31,534,470...31,551,441
Ensembl chr 5:31,534,226...31,549,175
JBrowse link
G SYK spleen associated tyrosine kinase involved_in ISO (MGI:3576850|PMID:15845454) UniProt PMID:15845454 MGI:3576850 NCBI chr 1:95,903,501...95,955,577
Ensembl chr 1:95,903,566...95,955,583
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G DEFB124 defensin beta 124 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr24:20,985,512...20,989,827
Ensembl chr24:20,985,512...20,989,831
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (MGI:5790524|PMID:27374331) CAFA PMID:27374331 MGI:5790524 NCBI chr 8:251,776...313,290
Ensembl chr 8:253,407...313,059
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) RGD
MGI
PMID:16949315 PMID:24169446 MGI:3686795 RGD:13204728 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:51,550,003...51,558,861
Ensembl chr18:51,550,040...51,558,875
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176422|PMID:11894098) MGI
Ensembl
PMID:11894098 GO_REF:0000107 MGI:2176422 NCBI chr29:35,283,209...35,311,608
Ensembl chr29:35,282,072...35,311,333
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) MGI PMID:16949315 MGI:3686795 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,790,505...35,792,967 JBrowse link
G TLR1 toll like receptor 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:19931471)
(PMID:21873635)
MGI
GO_Central
PMID:19931471 PMID:21873635 NCBI chr 3:73,504,359...73,544,822
Ensembl chr 3:73,539,715...73,544,624
JBrowse link
G TLR2 toll like receptor 2 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:19931471) UniProt
Ensembl
UniProt
MGI
PMID:19931471 GO_REF:0000024 GO_REF:0000107 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241
JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107
cellular response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGFBPL1 insulin like growth factor binding protein like 1 involved_in ISO (PMID:15845387) UniProt PMID:15845387 NCBI chr11:54,586,337...54,596,218 JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (PMID:11306509) UniProt PMID:11306509 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857
JBrowse link
G TXNIP thioredoxin interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,775,588...58,779,730
Ensembl chr17:58,776,871...58,779,531
JBrowse link
cellular response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFIT3 interferon induced protein with tetratricopeptide repeats 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:87,987...105,879
Ensembl chr 4:84,720...117,210
JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl
InterPro
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:24500530) AgBase PMID:24500530 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350
JBrowse link
G NR1I2 nuclear receptor subfamily 1 group I member 2 involved_in ISO (PMID:24525126) AgBase PMID:24525126 NCBI chr33:23,444,367...23,456,405
Ensembl chr33:23,432,690...23,455,347
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6103025|PMID:28835460) MGI
Ensembl
PMID:28835460 GO_REF:0000107 MGI:6103025 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906
JBrowse link
cellular response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
JBrowse link
G ARF1 ADP ribosylation factor 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chr14:835,476...836,424
Ensembl chr14:835,476...836,424
JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292
JBrowse link
G B9D2 B9 domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464
JBrowse link
G CALR calreticulin ISO RGD PMID:31399043 RGD:151347548 NCBI chr20:49,251,390...49,255,291
Ensembl chr20:49,251,777...49,255,245
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,357,706...51,359,207
Ensembl chr11:51,340,530...51,359,365
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:28146100) ARUK-UCL PMID:28146100 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G CHUK component of inhibitor of nuclear factor kappa B kinase complex involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr28:12,964,670...13,001,557
Ensembl chr28:12,965,479...13,001,512
JBrowse link
G CREBBP CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:2151262 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr32:598,406...599,925
Ensembl chr32:597,987...599,979
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 ISO RGD PMID:31442273 RGD:150540302 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:31575075) UniProt PMID:31575075 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774
JBrowse link
G EIF5A eukaryotic translation initiation factor 5A involved_in ISO (PMID:8596953), (PMID:9465063) UniProt PMID:8596953 PMID:9465063 NCBI chr 5:32,268,103...32,272,970 JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6478092|PMID:25741008) MGI
Ensembl
PMID:25741008 GO_REF:0000107 MGI:6478092 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:4452060|PMID:20457904) MGI PMID:20457904 MGI:4452060 NCBI chr25:11,551,372...11,670,891
Ensembl chr25:11,581,206...11,692,284
JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chr28:14,775,431...14,896,121
Ensembl chr28:14,788,369...14,895,978
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in ISO (PMID:9557682) UniProt PMID:9557682 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G GSDME gasdermin E involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:38,210,975...38,286,729
Ensembl chr14:38,211,540...38,292,280
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:25609812) UniProt PMID:25609812 NCBI chr 8:70,091,203...70,096,107
Ensembl chr 8:70,092,217...70,095,243
JBrowse link
G IFI6 interferon alpha inducible protein 6 involved_in ISO (PMID:26244642) UniProt PMID:26244642 NCBI chr 2:72,638,657...72,642,648
Ensembl chr 2:72,638,705...72,642,648
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in ISO (PMID:28146100) ARUK-UCL PMID:28146100 NCBI chr36:7,668,925...7,727,040
Ensembl chr36:7,649,727...8,261,048
JBrowse link
G IFNB1 interferon beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:40,668,295...40,668,855
Ensembl chr11:40,668,295...40,668,855
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,747,303...2,772,574
Ensembl chr38:2,747,297...2,772,587
JBrowse link
G IL10 interleukin 10 ISO porcine reproductive and respiratory syndrome virus RGD PMID:31442273 RGD:150540302 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057
JBrowse link