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ONTOLOGY REPORT - ANNOTATIONS


Term:response to biotic stimulus
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Accession:GO:0009607 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:synonym: Not4Curation
 narrow_synonym: response to biotic stress


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activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 involved_in ISO (PMID:32298652) UniProt PMID:32298652 NCBI chrNW_004955496:575,839...584,287
Ensembl chrNW_004955496:577,832...584,287
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413)
(MGI:5505711|PMID:23929945), (MGI:5908326|PMID:24077100), (MGI:6119245|PMID:29426904), (MGI:6754862|PMID:32911480), (MGI:6810288|PMID:32911481), (MGI:6828894|PMID:32913000)
(PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:29426904), (PMID:30007416), (PMID:32817552), (PMID:32911482), (PMID:32912999), (PMID:33542149)
(MGI:5487472|PMID:23258413)
UniProt PMID:23258413 PMID:23929945 PMID:24077100 PMID:26046437 PMID:28363908 More... MGI:5487472 MGI:5505711 MGI:5908326 MGI:6119245 MGI:6754862 MGI:6810288 MGI:6828894 NCBI chrNW_004955493:8,593,104...8,607,297 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:24971542) UniProt PMID:24971542 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004955538:1,469,544...1,475,010
Ensembl chrNW_004955538:1,469,544...1,475,019
JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:21575908) UniProt PMID:21575908 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Matr3 matrin 3 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955418:1,213,503...1,269,755 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20628368)
(PMID:18818105)
UniProt
BHF-UCL
PMID:18818105 PMID:20628368 NCBI chrNW_004955415:14,691,918...14,704,782
Ensembl chrNW_004955415:14,695,438...14,703,672
JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (MGI:3662990|PMID:16648852) UniProt PMID:16648852 MGI:3662990 NCBI chrNW_004955441:570,853...607,529
Ensembl chrNW_004955441:570,880...603,128
JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955475:10,833,514...10,853,460
Ensembl chrNW_004955475:10,833,189...10,853,519
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISO (PMID:26046437) UniProt PMID:26046437 NCBI chrNW_004955543:430,324...434,205
Ensembl chrNW_004955543:430,853...434,205
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955497:574,678...641,885
Ensembl chrNW_004955497:575,340...642,809
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955452:13,267,968...13,283,823 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004955450:2,804,551...2,870,450
Ensembl chrNW_004955450:2,808,130...2,870,450
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:18818105)
(MGI:6827194|PMID:23910378)
(PMID:23910378)
(MGI:5487473|PMID:23258412), (MGI:5487515|PMID:21947006)
BHF-UCL
ComplexPortal
UniProt
PMID:18818105 PMID:21947006 PMID:23258412 PMID:23910378 MGI:5487473 MGI:5487515 MGI:6827194 NCBI chrNW_004955418:1,091,022...1,097,064
Ensembl chrNW_004955418:1,083,613...1,100,448
JBrowse link
G Tbk1 TANK binding kinase 1 acts_upstream_of_or_within ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004955458:11,210,120...11,263,632
Ensembl chrNW_004955458:11,211,398...11,263,867
JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within ISO (MGI:3530402|PMID:15661922) MGI PMID:15661922 MGI:3530402 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tlr9 toll like receptor 9 involved_in ISO (MGI:5887188|PMID:25686612) UniProt PMID:25686612 MGI:5887188 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004955427:1,874,277...1,908,245
Ensembl chrNW_004955427:1,876,222...1,908,737
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955453:16,967,453...17,054,634
Ensembl chrNW_004955453:16,967,453...17,054,634
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (MGI:6434626|PMID:32296175), (MGI:6436412|PMID:32200799)
(MGI:6453154|PMID:32350114), (MGI:6490907|PMID:33109609)
UniProt PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 MGI:6434626 MGI:6436412 MGI:6453154 MGI:6490907 NCBI chrNW_004955445:1,867,436...1,878,132
Ensembl chrNW_004955445:1,866,376...1,881,948
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30135424), (PMID:30193849)
(MGI:6209107|PMID:30135424), (MGI:6271678|PMID:30193849)
UniProt PMID:30135424 PMID:30193849 MGI:6209107 MGI:6271678 NCBI chrNW_004955597:194,912...197,697
Ensembl chrNW_004955597:195,002...196,231
JBrowse link
G Znfx1 zinc finger NFX1-type containing 1 involved_in ISO (MGI:6384069|PMID:31685995) UniProt PMID:31685995 MGI:6384069 NCBI chrNW_004955445:8,854,539...8,879,822
Ensembl chrNW_004955445:8,854,610...8,879,821
JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004955414:25,951,473...25,953,593
Ensembl chrNW_004955414:25,951,349...25,953,645
JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568
JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980
JBrowse link
G Bpifa1 BPI fold containing family A member 1 involved_in ISO (PMID:23499554)
(MGI:5484728|PMID:23499554)
UniProt PMID:23499554 MGI:5484728 NCBI chrNW_004955422:28,063,077...28,069,939 JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:12759353), (PMID:12860195), (PMID:14978112), (PMID:20209079), (PMID:7529412) UniProt PMID:7529412 PMID:12759353 PMID:12860195 PMID:14978112 PMID:20209079 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Dcd dermcidin involved_in ISO (PMID:11694882) ComplexPortal PMID:11694882 NCBI chrNW_004955458:1,875,244...1,879,434 JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004955422:20,078,393...20,080,855
Ensembl chrNW_004955422:20,078,393...20,080,855
JBrowse link
G Jchain joining chain of multimeric IgA and IgM involved_in ISO (PMID:23250751) UniProt PMID:23250751 NCBI chrNW_004955447:2,292,387...2,321,596
Ensembl chrNW_004955447:2,313,808...2,321,663
JBrowse link
G LOC102004444 beta-defensin 1-like involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004955403:53,643,328...53,644,361
Ensembl chrNW_004955403:53,643,300...53,644,505
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:1599934), (PMID:18714013) UniProt PMID:1599934 PMID:18714013 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955410:26,348,388...26,355,232
Ensembl chrNW_004955410:26,348,504...26,355,297
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004955455:11,308,848...11,316,245
Ensembl chrNW_004955455:11,308,643...11,316,254
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO (PMID:18714013) UniProt PMID:18714013 NCBI chrNW_004955413:24,431,592...24,482,229
Ensembl chrNW_004955413:24,429,589...24,482,537
JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProt PMID:25075772 MGI:5902674 NCBI chrNW_004955550:1,687,068...1,688,160 JBrowse link
G Rnase7 ribonuclease A family member 7 involved_in ISO (PMID:23302724), (PMID:25075772) UniProt PMID:23302724 PMID:25075772 NCBI chrNW_004955550:1,796,301...1,797,801 JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004955534:200,591...203,827 JBrowse link
G Tac1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955432:13,991,647...13,999,665
Ensembl chrNW_004955432:13,991,414...13,999,728
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955439:9,021,923...9,031,783
Ensembl chrNW_004955439:9,021,904...9,031,792
JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Defb136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chrNW_004955403:53,168,733...53,170,177
Ensembl chrNW_004955403:53,167,242...53,170,281
JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chrNW_004955563:977,030...998,487
Ensembl chrNW_004955563:977,030...998,485
JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 galectin 4 acts_upstream_of_or_within ISO (MGI:6507238|PMID:27427436) MGI PMID:27427436 MGI:6507238 NCBI chrNW_004955468:694,831...701,623
Ensembl chrNW_004955468:694,873...701,535
JBrowse link
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:4838964|PMID:20056603) MGI PMID:20056603 MGI:4838964 NCBI chrNW_004955412:5,780,772...5,792,485
Ensembl chrNW_004955412:5,778,502...5,792,445
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chrNW_004955412:5,780,772...5,792,485
Ensembl chrNW_004955412:5,778,502...5,792,445
JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin NOT|involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004955414:25,951,473...25,953,593
Ensembl chrNW_004955414:25,951,349...25,953,645
JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:14978112), (PMID:20209079) UniProt PMID:14978112 PMID:20209079 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chrNW_004955580:1,025,481...1,036,752
Ensembl chrNW_004955580:1,029,553...1,036,849
JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in ISO (PMID:23147407) UniProt PMID:23147407 NCBI chrNW_004955470:1,209,389...1,214,730
Ensembl chrNW_004955470:1,209,325...1,214,821
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:11083624) UniProt PMID:11083624 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955410:26,348,388...26,355,232
Ensembl chrNW_004955410:26,348,504...26,355,297
JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO (PMID:23527010) UniProt PMID:23527010 NCBI chrNW_004955491:4,954,809...4,957,724
Ensembl chrNW_004955491:4,955,068...4,956,956
JBrowse link
G Tac1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955432:13,991,647...13,999,665
Ensembl chrNW_004955432:13,991,414...13,999,728
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955439:9,021,923...9,031,783
Ensembl chrNW_004955439:9,021,904...9,031,792
JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (MGI:5310700|PMID:22265677) UniProt PMID:22265677 MGI:5310700 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in ISO (PMID:24231284), (PMID:25057046), (PMID:25702837), (PMID:26679537), (PMID:26961233), (PMID:29080677), (PMID:33548172), (PMID:33558980)
(MGI:5567862|PMID:24470469), (MGI:5919121|PMID:26679537), (MGI:5919639|PMID:25621893), (MGI:6117948|PMID:29080677), (MGI:6445005|PMID:32358020), (MGI:6508474|PMID:33548172)
(MGI:5310700|PMID:22265677)
(PMID:26488816)
UniProt PMID:22265677 PMID:24231284 PMID:24470469 PMID:25057046 PMID:25621893 More... MGI:5310700 MGI:5567862 MGI:5919121 MGI:5919639 MGI:6117948 MGI:6445005 MGI:6508474 NCBI chrNW_004955513:4,350,873...4,359,345
Ensembl chrNW_004955513:4,350,147...4,359,345
JBrowse link
G Clec4d C-type lectin domain family 4 member D involved_in ISO (PMID:23911656)
(MGI:5562511|PMID:23911656)
UniProt PMID:23911656 MGI:5562511 NCBI chrNW_004955413:5,267,548...5,276,969
Ensembl chrNW_004955413:5,267,161...5,277,090
JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in ISO (MGI:3796003|PMID:18490740) UniProt PMID:18490740 MGI:3796003 NCBI chrNW_004955413:5,256,523...5,261,385
Ensembl chrNW_004955413:5,256,440...5,262,938
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (PMID:29326275)
(MGI:6110065|PMID:29326275)
UniProt PMID:29326275 MGI:6110065 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230
JBrowse link
G Defb119 defensin beta 119 involved_in ISO (PMID:24449502) UniProt PMID:24449502 NCBI chrNW_004955422:29,544,805...29,550,815
Ensembl chrNW_004955422:29,544,725...29,551,024
JBrowse link
G Defb136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chrNW_004955403:53,168,733...53,170,177
Ensembl chrNW_004955403:53,167,242...53,170,281
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (MGI:5300086|PMID:22041900) ARUK-UCL PMID:22041900 MGI:5300086 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO (PMID:23527010) UniProt PMID:23527010 NCBI chrNW_004955491:4,954,809...4,957,724
Ensembl chrNW_004955491:4,955,068...4,956,956
JBrowse link
antimicrobial humoral immune response mediated by antimicrobial peptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004955414:25,951,473...25,953,593
Ensembl chrNW_004955414:25,951,349...25,953,645
JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568
JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980
JBrowse link
G Bpifa1 BPI fold containing family A member 1 involved_in ISO (PMID:21805676) UniProt PMID:21805676 NCBI chrNW_004955422:28,063,077...28,069,939 JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:17012259)
(MGI:3770082|PMID:17012259)
(PMID:12759353), (PMID:12860195), (PMID:14978112), (PMID:20209079), (PMID:20421939), (PMID:23537644), (PMID:7529412), (PMID:9182550)
UniProt PMID:7529412 PMID:9182550 PMID:12759353 PMID:12860195 PMID:14978112 More... MGI:3770082 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Ccl1 C-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955481:9,085,943...9,089,147 JBrowse link
G Ccl17 C-C motif chemokine ligand 17 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955433:15,052,616...15,054,732
Ensembl chrNW_004955433:15,053,061...15,054,572
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 involved_in ISO (PMID:12949249), (PMID:19109182) UniProt PMID:12949249 PMID:19109182 NCBI chrNW_004955453:6,846,625...6,850,007
Ensembl chrNW_004955453:6,846,549...6,850,031
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955472:1,427,660...1,428,771
Ensembl chrNW_004955472:1,427,710...1,429,102
JBrowse link
G Ccl22 C-C motif chemokine ligand 22 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955433:15,002,001...15,007,324
Ensembl chrNW_004955433:15,001,930...15,008,032
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955563:1,249,098...1,255,469 JBrowse link
G Ccl27 C-C motif chemokine ligand 27 involved_in ISO (PMID:19109182) UniProt PMID:19109182 NCBI chrNW_004955472:1,470,407...1,474,800
Ensembl chrNW_004955472:1,471,551...1,474,777
JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in ISO (PMID:12538707)
(MGI:5897759|PMID:12538707)
UniProt PMID:12538707 MGI:5897759 NCBI chrNW_004955446:18,902,465...18,925,178
Ensembl chrNW_004955446:18,902,636...18,925,561
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955433:769,449...771,137
Ensembl chrNW_004955433:766,272...771,231
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955546:1,929,269...1,941,690
Ensembl chrNW_004955546:1,929,269...1,941,690
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955433:2,123,190...2,129,119 JBrowse link
G Cxcl14 C-X-C motif chemokine ligand 14 involved_in ISO (PMID:12949249), (PMID:19109182)
(MGI:3822386|PMID:19109182)
UniProt PMID:12949249 PMID:19109182 MGI:3822386 NCBI chrNW_004955408:30,733,079...30,740,854
Ensembl chrNW_004955408:30,733,079...30,740,854
JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:19109182) UniProt PMID:19109182 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955433:724,566...731,945
Ensembl chrNW_004955433:724,515...732,192
JBrowse link
G Dcd dermcidin involved_in ISO (PMID:11694882) UniProt PMID:11694882 NCBI chrNW_004955458:1,875,244...1,879,434 JBrowse link
G Defb118 defensin beta 118 involved_in ISO (PMID:15033915) UniProt PMID:15033915 NCBI chrNW_004955422:29,554,310...29,560,660 JBrowse link
G Defb127 defensin beta 127 involved_in ISO (PMID:19373462) UniProt PMID:19373462 NCBI chrNW_004955597:38,613...40,241 JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 involved_in ISO (PMID:19189310)
(PMID:11007786)
UniProt PMID:11007786 PMID:19189310 NCBI chrNW_004955477:863,388...899,703 JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517
JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chrNW_004955580:1,025,481...1,036,752
Ensembl chrNW_004955580:1,029,553...1,036,849
JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195)
(MGI:5897760|PMID:10496312)
UniProt PMID:10496312 PMID:12860195 MGI:5897760 NCBI chrNW_004955422:20,078,393...20,080,855
Ensembl chrNW_004955422:20,078,393...20,080,855
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) UniProt PMID:22832495 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783
JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO (PMID:11034317), (PMID:11113131) UniProt PMID:11034317 PMID:11113131 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 involved_in ISO (PMID:16204630) UniProt PMID:16204630 NCBI chrNW_004955452:5,846,085...5,849,996 JBrowse link
G Hrg histidine rich glycoprotein involved_in ISO (PMID:18797515)
(MGI:5294287|PMID:18797515)
UniProt PMID:18797515 MGI:5294287 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Kng1 kininogen 1 involved_in ISO (PMID:12074933) UniProt PMID:12074933 NCBI chrNW_004955420:20,989,197...21,016,084 JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328)
(MGI:5466437|PMID:23006328)
UniProt PMID:23006328 MGI:5466437 NCBI chrNW_004955547:2,902,962...2,907,670 JBrowse link
G Leap2 liver enriched antimicrobial peptide 2 involved_in ISO (PMID:12493837) UniProt PMID:12493837 NCBI chrNW_004955408:4,245,574...4,247,117
Ensembl chrNW_004955408:4,245,574...4,247,117
JBrowse link
G Lgals3 galectin 3 involved_in ISO (PMID:16982911) UniProt PMID:16982911 NCBI chrNW_004955409:8,448,120...8,452,437
Ensembl chrNW_004955409:8,447,774...8,452,438
JBrowse link
G LOC102004444 beta-defensin 1-like involved_in ISO (PMID:25122636)
(PMID:12860195)
UniProt PMID:12860195 PMID:25122636 NCBI chrNW_004955403:53,643,328...53,644,361
Ensembl chrNW_004955403:53,643,300...53,644,505
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:15155221) UniProt PMID:15155221 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
G Muc7 mucin 7, secreted involved_in ISO (PMID:12543672) UniProt PMID:12543672 NCBI chrNW_004955447:2,511,841...2,520,312 JBrowse link
G Nppb natriuretic peptide B involved_in ISO (PMID:11410403) UniProt PMID:11410403 NCBI chrNW_004955486:2,054,775...2,056,130 JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306)
(PMID:9756788)
UniProt PMID:9756788 PMID:18603306 NCBI chrNW_004955410:26,348,388...26,355,232
Ensembl chrNW_004955410:26,348,504...26,355,297
JBrowse link
G Nts neurotensin involved_in ISO (PMID:12074933) UniProt PMID:12074933 NCBI chrNW_004955405:23,696,258...23,758,487
Ensembl chrNW_004955405:23,748,280...23,758,529
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in ISO (PMID:16354652) UniProt PMID:16354652 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 involved_in ISO (PMID:16354652) UniProt PMID:16354652 NCBI chrNW_004955592:100,022...111,609
Ensembl chrNW_004955592:100,088...111,610
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004955455:11,308,848...11,316,245
Ensembl chrNW_004955455:11,308,643...11,316,254
JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) UniProt PMID:10670585 NCBI chrNW_004955469:7,217,233...7,220,401
Ensembl chrNW_004955469:7,217,363...7,220,386
JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in ISO (PMID:25075772)
(MGI:5902674|PMID:25075772)
UniProt PMID:25075772 MGI:5902674 NCBI chrNW_004955550:1,687,068...1,688,160 JBrowse link
G Rnase7 ribonuclease A family member 7 involved_in ISO (PMID:12244054), (PMID:25075772) UniProt PMID:12244054 PMID:25075772 NCBI chrNW_004955550:1,796,301...1,797,801 JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) UniProt PMID:22083756 NCBI chrNW_004955422:25,757,558...25,760,054
Ensembl chrNW_004955422:25,757,558...25,759,769
JBrowse link
G Rpl30 ribosomal protein L30 involved_in ISO (PMID:15019208) UniProt PMID:15019208 NCBI chrNW_004955417:13,764,814...13,767,698
Ensembl chrNW_004955417:13,764,814...13,767,698
JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004955534:200,591...203,827 JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15019208) UniProt PMID:15019208 NCBI chrNW_004955555:969,345...976,122
Ensembl chrNW_004955555:969,340...976,509
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO (PMID:12874352) UniProt PMID:12874352 NCBI chrNW_004955592:90,647...93,842 JBrowse link
G Tac1 tachykinin precursor 1 involved_in ISO (PMID:12074933), (PMID:18603306)
(PMID:18603306)
UniProt PMID:12074933 PMID:18603306 NCBI chrNW_004955432:13,991,647...13,999,665
Ensembl chrNW_004955432:13,991,414...13,999,728
JBrowse link
G Tslp thymic stromal lymphopoietin involved_in ISO (PMID:24850429) UniProt PMID:24850429 NCBI chrNW_004955418:4,041,529...4,045,534 JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004955439:9,021,923...9,031,783
Ensembl chrNW_004955439:9,021,904...9,031,792
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (MGI:85481|PMID:9009202) MGI PMID:9009202 MGI:85481 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466
JBrowse link
G Colec11 collectin subfamily member 11 involved_in ISO (PMID:20956340) UniProt PMID:20956340 NCBI chrNW_004955487:3,778,901...3,789,852
Ensembl chrNW_004955487:3,778,858...3,790,080
JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955451:5,756,648...5,787,617
Ensembl chrNW_004955451:5,756,835...5,770,238
JBrowse link
G Clpb caseinolytic mitochondrial matrix peptidase chaperone subunit B involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955414:18,968,144...19,106,241
Ensembl chrNW_004955414:18,967,435...19,106,241
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927
JBrowse link
G Ddx58 DExD/H-box helicase 58 involved_in ISO (PMID:28469175) UniProt PMID:28469175 NCBI chrNW_004955472:3,093,895...3,135,524
Ensembl chrNW_004955472:3,093,939...3,133,987
JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in ISO (PMID:24990078)
(MGI:6833928|PMID:34678144)
(MGI:5699624|PMID:26494172)
UniProt PMID:24990078 PMID:26494172 PMID:34678144 MGI:5699624 MGI:6833928 NCBI chrNW_004955480:451,126...502,226
Ensembl chrNW_004955480:451,126...502,226
JBrowse link
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chrNW_004955425:3,581,705...3,588,528 JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chrNW_004955563:977,030...998,487
Ensembl chrNW_004955563:977,030...998,485
JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:35102342) UniProt PMID:35102342 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006
JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in ISO (PMID:34161762)
(MGI:5699624|PMID:26494172)
(MGI:6833928|PMID:34678144)
UniProt PMID:26494172 PMID:34161762 PMID:34678144 MGI:5699624 MGI:6833928 NCBI chrNW_004955476:11,755,489...11,762,781 JBrowse link
G Nmb neuromedin B involved_in ISO (MGI:6435299|PMID:31601264) UniProt PMID:31601264 MGI:6435299 NCBI chrNW_004955416:14,467,648...14,470,645
Ensembl chrNW_004955416:14,467,650...14,470,515
JBrowse link
G Nmbr neuromedin B receptor involved_in ISO (PMID:31601264)
(MGI:6435299|PMID:31601264)
UniProt PMID:31601264 MGI:6435299 NCBI chrNW_004955436:18,116,274...18,127,045
Ensembl chrNW_004955436:18,116,274...18,127,045
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955413:4,557,969...4,563,697
Ensembl chrNW_004955413:4,558,259...4,563,582
JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO (PMID:28469175), (PMID:31006531)
(MGI:6152590|PMID:21147464), (MGI:6155526|PMID:23950712)
UniProt PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 MGI:6152590 MGI:6155526 NCBI chrNW_004955481:7,111,760...7,122,800 JBrowse link
G Senp7 SUMO specific peptidase 7 involved_in ISO (MGI:5918130|PMID:28095500) UniProt PMID:28095500 MGI:5918130 NCBI chrNW_004955427:2,925,159...3,091,932
Ensembl chrNW_004955427:2,924,108...3,092,020
JBrowse link
G Zdhhc1 zinc finger DHHC-type containing 1 involved_in ISO (PMID:25299331)
(MGI:6392967|PMID:25299331)
UniProt PMID:25299331 MGI:6392967 NCBI chrNW_004955484:9,224,559...9,245,894
Ensembl chrNW_004955484:9,234,319...9,245,894
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of ISO (MGI:3528786|PMID:15692051) MGI PMID:15692051 MGI:3528786 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcn1 ficolin 1 involved_in ISO (PMID:21037097) UniProt PMID:21037097 NCBI chrNW_004955513:3,690,550...3,697,785
Ensembl chrNW_004955513:3,687,232...3,698,673
JBrowse link
G Masp1 MBL associated serine protease 1 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chrNW_004955420:20,540,266...20,605,830
Ensembl chrNW_004955420:20,540,016...20,605,854
JBrowse link
G Masp2 MBL associated serine protease 2 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chrNW_004955486:2,641,730...2,655,125 JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3042099|PMID:12719478) MGI PMID:12719478 MGI:3042099 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004955412:27,303,548...27,315,031
Ensembl chrNW_004955412:27,312,489...27,315,031
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:16880211) UniProt PMID:16880211 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224
JBrowse link
G Cd36 CD36 molecule involved_in ISO (PMID:16880211) UniProt PMID:16880211 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313
JBrowse link
G Tlr2 toll like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
UniProt
MGI
PMID:16880211 PMID:19931471 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
G Tlr6 toll like receptor 6 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
UniProt
MGI
PMID:16880211 PMID:19931471 NCBI chrNW_004955443:8,401,461...8,427,175
Ensembl chrNW_004955443:8,422,534...8,424,942
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Cda cytidine deaminase ISO K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chrNW_004955452:1,131,968...1,156,777
Ensembl chrNW_004955452:1,132,049...1,156,565
JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chrNW_004955404:30,254,934...30,266,898
Ensembl chrNW_004955404:30,254,841...30,270,921
JBrowse link
G Actg1 actin gamma 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955506:1,546,678...1,549,611
Ensembl chrNW_004955506:1,546,678...1,552,105
JBrowse link
G Actr2 actin related protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955424:19,293,949...19,333,170
Ensembl chrNW_004955424:19,293,949...19,333,170
JBrowse link
G Actr3 actin related protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955459:15,216,914...15,284,013
Ensembl chrNW_004955459:15,216,914...15,284,013
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chrNW_004955513:2,761,386...2,786,447
Ensembl chrNW_004955513:2,764,186...2,786,187
JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISO (PMID:9614071)
PMID:7769138
UniProt PMID:7769138 PMID:9614071 RGD:61535 NCBI chrNW_004955437:157,509...158,919 JBrowse link
G Aqp4 aquaporin 4 involved_in ISO (PMID:17645239) UniProt PMID:17645239 NCBI chrNW_004955772:1,160...10,709
Ensembl chrNW_004955772:1,159...10,709
JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060
JBrowse link
G Asl argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chrNW_004955456:8,409,767...8,419,915 JBrowse link
G Ass1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
G Capg capping actin protein, gelsolin like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955424:2,064,672...2,080,192
Ensembl chrNW_004955424:2,072,035...2,080,086
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) UniProt PMID:9407497 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Cd47 CD47 molecule involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chrNW_004955427:8,704,519...8,740,962 JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955452:2,255,940...2,299,042
Ensembl chrNW_004955452:2,255,117...2,299,042
JBrowse link
G Cdc42ep2 CDC42 effector protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955422:19,922,179...19,928,570
Ensembl chrNW_004955422:19,922,179...19,928,570
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955553:311,725...335,125
Ensembl chrNW_004955553:313,376...314,422
JBrowse link
G Ciita class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chrNW_004955442:7,600,903...7,647,619
Ensembl chrNW_004955442:7,603,893...7,647,624
JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chrNW_004955420:17,798,974...17,815,049
Ensembl chrNW_004955420:17,798,974...17,815,205
JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)
UniProt PMID:18995835 PMID:23071094 MGI:5466658 NCBI chrNW_004955432:29,925...254,327
Ensembl chrNW_004955432:29,197...254,379
JBrowse link
G Dapk3 death associated protein kinase 3 involved_in ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)
UniProt PMID:18995835 PMID:23071094 MGI:5466658 NCBI chrNW_004955495:4,809,475...4,822,210
Ensembl chrNW_004955495:4,810,474...4,823,259
JBrowse link
G Daxx death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004955437:1,869,692...1,874,041
Ensembl chrNW_004955437:1,869,572...1,873,050
JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chrNW_004955465:2,287,906...2,314,945
Ensembl chrNW_004955465:2,287,798...2,314,753
JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)
UniProt
MGI
PMID:15479637 PMID:23071094 MGI:5466658 NCBI chrNW_004955520:3,550,558...3,606,015
Ensembl chrNW_004955520:3,550,558...3,606,697
JBrowse link
G Evl Enah/Vasp-like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955438:21,198,761...21,298,657
Ensembl chrNW_004955438:21,198,763...21,298,657
JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Faslg Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955430:7,680,394...7,832,124
Ensembl chrNW_004955430:7,680,394...7,832,124
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783
JBrowse link
G Gbp5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within
ISO (PMID:17266443)
(MGI:4412460|PMID:18025219)
UniProt
MGI
PMID:17266443 PMID:18025219 MGI:4412460 NCBI chrNW_004955423:4,914,430...4,926,850
Ensembl chrNW_004955423:4,917,590...4,926,007
JBrowse link
G Gsn gelsolin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) MGI PMID:18025219 MGI:4412460 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620
JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chrNW_004955524:3,276,932...3,299,617 JBrowse link
G Il18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634
JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO (PMID:25122610) UniProt PMID:25122610 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106
JBrowse link
G Irgm immunity related GTPase M acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Kif16b kinesin family member 16B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955415:25,449,734...25,740,697
Ensembl chrNW_004955415:25,447,539...25,740,775
JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955429:23,632,246...23,678,797
Ensembl chrNW_004955429:23,631,282...23,678,562
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G LOC102025724 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in ISO (PMID:8568247) UniProt PMID:8568247 NCBI chrNW_004955437:1,644,037...1,657,094
Ensembl chrNW_004955437:1,643,238...1,651,071
JBrowse link
G Mrc1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chrNW_004955429:10,139,398...10,232,541
Ensembl chrNW_004955429:10,139,355...10,232,600
JBrowse link
G Mst1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004955532:1,590,685...1,595,655
Ensembl chrNW_004955532:1,590,755...1,595,148
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Myo18a myosin XVIIIA acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955481:4,020,274...4,115,014
Ensembl chrNW_004955481:4,028,706...4,113,878
JBrowse link
G Myo1c myosin IC acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955481:1,676,788...1,701,421
Ensembl chrNW_004955481:1,676,728...1,703,488
JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) MGI PMID:18025219 MGI:4412460 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:15231837) UniProt PMID:15231837 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chrNW_004955478:7,448,584...7,531,860
Ensembl chrNW_004955478:7,478,492...7,531,188
JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955424:12,506,738...12,544,284
Ensembl chrNW_004955424:12,506,854...12,542,229
JBrowse link
G Rab12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955402:3,102,709...3,109,701
Ensembl chrNW_004955402:3,103,708...3,110,701
JBrowse link
G Rab20 RAB20, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955404:2,087,580...2,088,545 JBrowse link
G Rab43 RAB43, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955429:13,474,460...13,506,979
Ensembl chrNW_004955429:13,474,460...13,506,979
JBrowse link
G Rab7b RAB7B, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955406:41,615,302...41,638,157
Ensembl chrNW_004955406:41,615,302...41,638,151
JBrowse link
G Rpl13a ribosomal protein L13a involved_in ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)
UniProt PMID:15479637 PMID:23071094 MGI:5466658 NCBI chrNW_004955559:1,358,479...1,362,663
Ensembl chrNW_004955559:1,358,486...1,362,663
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (MGI:5913528|PMID:28178239) UniProt PMID:28178239 MGI:5913528 NCBI chrNW_004955451:3,181,085...3,225,610 JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:18655181) UniProt PMID:18655181 NCBI chrNW_004955532:713,725...723,190
Ensembl chrNW_004955532:713,215...722,817
JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109
JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chrNW_004955506:4,222,455...4,225,563
Ensembl chrNW_004955506:4,222,455...4,225,563
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:23386060) UniProt PMID:23386060 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762
JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955436:16,303,169...16,327,854
Ensembl chrNW_004955436:16,303,189...16,327,854
JBrowse link
G Stx8 syntaxin 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955467:7,524,223...7,789,630
Ensembl chrNW_004955467:7,523,464...7,792,056
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955419:963,829...1,000,759
Ensembl chrNW_004955419:963,829...1,000,759
JBrowse link
G Stxbp2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955563:1,617,621...1,624,441
Ensembl chrNW_004955563:1,617,621...1,624,441
JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955435:12,215,665...12,270,769
Ensembl chrNW_004955435:12,215,665...12,274,465
JBrowse link
G Stxbp4 syntaxin binding protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955451:7,463,285...7,635,690
Ensembl chrNW_004955451:7,466,314...7,619,277
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chrNW_004955420:25,476,975...25,479,969
Ensembl chrNW_004955420:25,477,122...25,479,969
JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:11672593) UniProt PMID:11672593 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
G Tlr3 toll like receptor 3 NOT ISO intestinal epithelial cells
thyrocytes
RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chrNW_004955403:22,977,882...23,001,392
Ensembl chrNW_004955403:22,979,120...23,001,467
JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:11672593) UniProt PMID:11672593 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:16525716 RGD:14985246 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Vamp3 vesicle associated membrane protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955486:5,103,228...5,112,157
Ensembl chrNW_004955486:5,103,106...5,112,176
JBrowse link
G Vamp4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955406:12,223,736...12,260,506
Ensembl chrNW_004955406:12,223,736...12,260,317
JBrowse link
G Vamp8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554
JBrowse link
G Vps26b VPS26, retromer complex component B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955412:35,035,730...35,061,441
Ensembl chrNW_004955412:35,035,208...35,061,441
JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955543:243,618...253,489
Ensembl chrNW_004955543:247,631...253,274
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) UniProt PMID:18174455 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Zyx zyxin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chrNW_004955494:268,844...277,381
Ensembl chrNW_004955494:269,222...276,904
JBrowse link
cellular response to lectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:2200903 RGD:10059628 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619
JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chrNW_004955507:5,724,788...5,791,281
Ensembl chrNW_004955507:5,724,762...5,790,812
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:82358|PMID:8806812) MGI PMID:8806812 MGI:82358 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450), (PMID:23610393)
(MGI:5490395|PMID:23610393), (MGI:5490396|PMID:23609450)
UniProt PMID:23609450 PMID:23610393 MGI:5490395 MGI:5490396 NCBI chrNW_004955404:30,254,934...30,266,898
Ensembl chrNW_004955404:30,254,841...30,270,921
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004955463:14,545,425...14,646,498
Ensembl chrNW_004955463:14,545,589...14,645,419
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chrNW_004955513:2,761,386...2,786,447
Ensembl chrNW_004955513:2,764,186...2,786,187
JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (MGI:5763364|PMID:19531803) UniProt PMID:19531803 MGI:5763364 NCBI chrNW_004955495:7,874,655...7,893,209
Ensembl chrNW_004955495:7,874,746...7,892,944
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:7730328)
(MGI:5294542|PMID:17239933)
BHF-UCL
UniProt
PMID:7730328 PMID:17239933 MGI:5294542 NCBI chrNW_004955425:2,258,554...2,267,699
Ensembl chrNW_004955425:2,258,392...2,267,878
JBrowse link
G Arg1 arginase 1 ISO RGD PMID:9013624 RGD:4144055 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972
JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060
JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) UniProt PMID:27671645 MGI:5887181 NCBI chrNW_004955470:3,951,010...3,964,391
Ensembl chrNW_004955470:3,950,750...3,965,750
JBrowse link
G Ass1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:19657094) UniProt PMID:19657094 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565
JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568
JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (MGI:71493|PMID:7889565) MGI PMID:7889565 MGI:71493 NCBI chrNW_004955455:7,598,794...7,727,386
Ensembl chrNW_004955455:7,598,794...7,727,386
JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980
JBrowse link
G Bysl bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chrNW_004955437:8,257,081...8,266,627
Ensembl chrNW_004955437:8,257,081...8,266,875
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682
JBrowse link
G Camp cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Capn2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chrNW_004955520:1,287,829...1,315,318
Ensembl chrNW_004955520:1,286,356...1,315,328
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chrNW_004955453:6,846,625...6,850,007
Ensembl chrNW_004955453:6,846,549...6,850,031
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within
involved_in
ISO (PMID:12594207)
(MGI:5645195|PMID:24380872), (MGI:80217|PMID:8612135)
(PMID:8612135)
RGD
MGI
UniProt
PMID:8612135 PMID:12594207 PMID:22511970 PMID:24380872 MGI:5645195 MGI:80217 RGD:7183752 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224
JBrowse link
G Cd180 CD180 molecule acts_upstream_of_or_within ISO (MGI:1860539|PMID:10880523) MGI PMID:10880523 MGI:1860539 NCBI chrNW_004955446:1,940,498...1,959,804
Ensembl chrNW_004955446:1,940,496...1,961,287
JBrowse link
G Cd300lb CD300 molecule like family member b acts_upstream_of_or_within ISO (MGI:5446972|PMID:22772446) MGI PMID:22772446 MGI:5446972 NCBI chrNW_004955553:1,382,594...1,392,592
Ensembl chrNW_004955553:1,383,433...1,392,598
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO (MGI:3587138|PMID:16061696) MGI PMID:16061696 MGI:3587138 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313
JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093
JBrowse link
G Cd68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chrNW_004955467:9,340,490...9,343,912
Ensembl chrNW_004955467:9,341,364...9,343,836
JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chrNW_004955427:19,237,251...19,274,001
Ensembl chrNW_004955427:19,236,445...19,261,517
JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) RGD
MGI
PMID:19047410 PMID:21039614 MGI:3828894 RGD:4892198 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874
JBrowse link
G Cdc73 cell division cycle 73 involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812
JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chrNW_004955411:35,312,722...35,411,951
Ensembl chrNW_004955411:35,312,722...35,412,246
JBrowse link
G Cdk4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (MGI:78049|PMID:8543804) MGI PMID:8543804 MGI:78049 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718
JBrowse link
G Cebpb CCAAT enhancer binding protein beta ISO RGD PMID:18405661 RGD:10401220 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chrNW_004955409:37,186,282...37,187,914
Ensembl chrNW_004955409:37,186,039...37,187,921
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (MGI:73245|PMID:7751651) MGI PMID:7751651 MGI:73245 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705
JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chrNW_004955408:3,452,009...3,454,255
Ensembl chrNW_004955408:3,451,965...3,454,312
JBrowse link
G Csf3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chrNW_004955451:14,688,181...14,690,126
Ensembl chrNW_004955451:14,688,181...14,690,126
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004955414:26,347,508...26,373,726
Ensembl chrNW_004955414:26,347,508...26,373,785
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:6162390|PMID:23499256) RGD
ARUK-UCL
PMID:10422773 PMID:23499256 MGI:6162390 RGD:4892028 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927
JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chrNW_004955467:10,132,461...10,136,649 JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:19912257) BHF-UCL
RGD
PMID:19912257 PMID:31442273 RGD:150540302 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:19948740)
(MGI:4453088|PMID:19948740)
UniProt PMID:19948740 MGI:4453088 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402
JBrowse link
G Ednrb endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chrNW_004955404:29,394,253...29,425,358
Ensembl chrNW_004955404:29,394,164...29,425,358
JBrowse link
G Efnb2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chrNW_004955404:5,000,906...5,030,068
Ensembl chrNW_004955404:5,000,906...5,030,126
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chrNW_004955507:2,035,918...2,141,327
Ensembl chrNW_004955507:2,036,050...2,137,377
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chrNW_004955513:5,070,050...5,075,098
Ensembl chrNW_004955513:5,068,875...5,075,098
JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chrNW_004955441:13,244,626...13,328,220
Ensembl chrNW_004955441:13,244,626...13,328,369
JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chrNW_004955457:629,599...694,948
Ensembl chrNW_004955457:629,518...696,975
JBrowse link
G Fubp1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chrNW_004955423:15,245,645...15,278,628
Ensembl chrNW_004955423:15,245,610...15,278,628
JBrowse link
G Gata1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chrNW_004955543:334,581...342,042
Ensembl chrNW_004955543:334,061...342,061
JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chrNW_004955442:15,280,753...15,283,405
Ensembl chrNW_004955442:15,281,419...15,283,266
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in
acts_upstream_of_or_within
ISO (PMID:20547752) UniProt PMID:20547752 NCBI chrNW_004955423:2,024,084...2,032,530
Ensembl chrNW_004955423:2,022,417...2,033,149
JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chrNW_004955420:2,483,173...2,486,414
Ensembl chrNW_004955420:2,478,877...2,487,215
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (MGI:6478067|PMID:32460388) UniProt PMID:32460388 MGI:6478067 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chrNW_004955408:29,665,534...29,684,225
Ensembl chrNW_004955408:29,665,260...29,684,207
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428
JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO (MGI:6437701|PMID:32513690) MGI PMID:32513690 MGI:6437701 NCBI chrNW_004955469:8,233,980...8,272,149
Ensembl chrNW_004955469:8,233,980...8,274,450
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) UniProt PMID:25337993 MGI:5705210 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320
JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) UniProt PMID:19811285 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chrNW_004955435:22,804,484...22,820,807
Ensembl chrNW_004955435:22,804,484...22,821,482
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chrNW_004955563:933,824...975,064 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) MGI PMID:18791161 MGI:3821815 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within
ISO (PMID:23071313)
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717)
ARUK-UCL
MGI
PMID:19047410 PMID:21609717 PMID:23071313 MGI:3828894 MGI:5013871 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) MGI PMID:18025219 PMID:21606371 MGI:4412460 MGI:5013875 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:23200736 RGD:7175528 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Il24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chrNW_004955406:42,431,845...42,437,392
Ensembl chrNW_004955406:42,432,795...42,437,016
JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371)
(PMID:23776175)
RGD
MGI
PMID:2789217 PMID:19047410 PMID:21606371 PMID:23776175 MGI:3828894 MGI:5013875 RGD:11049548 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004955580:663,651...668,622
Ensembl chrNW_004955580:661,609...668,622
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chrNW_004955559:1,223,986...1,228,671
Ensembl chrNW_004955559:1,224,874...1,228,624
JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO (MGI:3653161|PMID:9348310) MGI PMID:9348310 MGI:3653161 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chrNW_004955406:10,496,102...10,527,181
Ensembl chrNW_004955406:10,493,379...10,527,201
JBrowse link
G Ldoc1 LDOC1 regulator of NFKB signaling involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955539:127,705...129,147
Ensembl chrNW_004955539:127,887...128,324
JBrowse link
G Litaf lipopolysaccharide induced TNF factor acts_upstream_of_or_within ISO (MGI:3687609|PMID:16954198) MGI PMID:16954198 MGI:3687609 NCBI chrNW_004955442:7,054,418...7,084,973
Ensembl chrNW_004955442:7,077,823...7,083,437
JBrowse link
G LOC102006100 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)
UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004955408:35,342,733...35,382,821
Ensembl chrNW_004955408:35,374,508...35,382,314
JBrowse link
G LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004955485:7,615,132...7,652,899
Ensembl chrNW_004955485:7,645,363...7,650,658
JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232
JBrowse link
G Ltc4s leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chrNW_004955408:788,856...791,505 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529
JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429
JBrowse link
G Map2k3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chrNW_004955577:1,225,033...1,249,510
Ensembl chrNW_004955577:1,237,287...1,248,541
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in ISO (MGI:1101248|PMID:9405446) UniProt PMID:9405446 MGI:1101248 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288
JBrowse link
G Mrc1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chrNW_004955429:10,139,398...10,232,541
Ensembl chrNW_004955429:10,139,355...10,232,600
JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138
JBrowse link
G Ncl nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chrNW_004955453:4,154,627...4,164,253
Ensembl chrNW_004955453:4,154,627...4,164,253
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within
ISO (MGI:6451247|PMID:31786261)
(PMID:23776175)
RGD
MGI
PMID:16842873 PMID:23776175 PMID:31786261 MGI:6451247 RGD:10045666 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885
JBrowse link
G Nfkbib NFKB inhibitor beta acts_upstream_of_or_within ISO (MGI:4437182|PMID:20060382) MGI PMID:20060382 MGI:4437182 NCBI chrNW_004955468:617,078...626,151
Ensembl chrNW_004955468:617,078...626,151
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955437:90,623...100,918
Ensembl chrNW_004955437:90,577...100,918
JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:28847925)
(MGI:6095076|PMID:28847925)
(PMID:12483741)
UniProt
BHF-UCL
PMID:12483741 PMID:28847925 MGI:6095076 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219) RGD
MGI
PMID:18025219 PMID:18791161 PMID:21975807 MGI:3821815 MGI:4412460 RGD:5508737 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (PMID:18511497) BHF-UCL PMID:18511497 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:18511497)
(MGI:5009771|PMID:21187453)
BHF-UCL PMID:18511497 PMID:21187453 MGI:5009771 NCBI chrNW_004955422:940,310...954,170
Ensembl chrNW_004955422:940,310...949,049
JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:5707586|PMID:18972444) UniProt PMID:18972444 MGI:5707586 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chrNW_004955403:50,507,971...50,558,881
Ensembl chrNW_004955403:50,507,116...50,558,826
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chrNW_004955454:12,741,577...12,751,282
Ensembl chrNW_004955454:12,744,765...12,752,226
JBrowse link
G P2ry2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chrNW_004955414:18,248,082...18,271,047
Ensembl chrNW_004955414:18,248,082...18,260,450
JBrowse link
G Pabpn1 poly(A) binding protein nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) UniProt PMID:22844456 MGI:5795816 NCBI chrNW_004955409:37,000,423...37,004,823
Ensembl chrNW_004955409:37,000,451...37,004,682
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004955468:166,477...172,200 JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (MGI:4438829|PMID:19946272) BHF-UCL PMID:19946272 MGI:4438829 NCBI chrNW_004955485:530,642...553,508
Ensembl chrNW_004955485:529,860...553,601
JBrowse link
G Pde2a phosphodiesterase 2A acts_upstream_of_or_within ISO (PMID:21571906) UniProt PMID:21571906 NCBI chrNW_004955414:18,765,591...18,826,717
Ensembl chrNW_004955414:18,735,822...18,827,236
JBrowse link
G Pde4b phosphodiesterase 4B acts_upstream_of_or_within ISO (MGI:3521611|PMID:15585880) MGI PMID:15585880 MGI:3521611 NCBI chrNW_004955423:24,464,503...24,906,409
Ensembl chrNW_004955423:24,463,953...24,906,394
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO (MGI:3521611|PMID:15585880) MGI PMID:15585880 MGI:3521611 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653
JBrowse link
G Plaa phospholipase A2 activating protein involved_in ISO (PMID:28007986) UniProt PMID:28007986 NCBI chrNW_004955472:7,879,196...7,915,040
Ensembl chrNW_004955472:7,879,196...7,919,834
JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chrNW_004955437:17,995,726...18,000,542
Ensembl chrNW_004955437:17,994,537...18,000,209
JBrowse link
G Plscr1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Plscr3 phospholipid scramblase 3 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chrNW_004955467:9,534,462...9,539,738
Ensembl chrNW_004955467:9,535,261...9,539,738
JBrowse link
G Plscr4 phospholipid scramblase 4 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chrNW_004955474:11,299,390...11,331,982
Ensembl chrNW_004955474:11,299,375...11,333,382
JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chrNW_004955481:1,499,634...1,530,670
Ensembl chrNW_004955481:1,499,634...1,530,670
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Rara retinoic acid receptor alpha involved_in ISO (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in
ISO (PMID:20547752)
(PMID:25762865)
RGD
UniProt
ARUK-UCL
PMID:9918814 PMID:15728586 PMID:20547752 PMID:25762865 RGD:1580656 RGD:2298880 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:2176422|PMID:11894098)
(MGI:2176424|PMID:11894097)
MGI PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228
JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO (MGI:5660440|PMID:25903009) UniProt PMID:25903009 MGI:5660440 NCBI chrNW_004955495:6,709,190...6,770,816
Ensembl chrNW_004955495:6,729,205...6,772,180
JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:18675776) BHF-UCL PMID:18675776 NCBI chrNW_004955416:28,152,984...28,162,173
Ensembl chrNW_004955416:28,153,460...28,162,095
JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:19916862) RGD
BHF-UCL
PMID:19916862 PMID:20060032 RGD:13208812 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142
JBrowse link
G Sgms1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chrNW_004955425:5,507,905...5,819,357
Ensembl chrNW_004955425:5,784,751...5,822,488
JBrowse link
G Shpk sedoheptulokinase involved_in ISO (PMID:22682222)
(MGI:5428058|PMID:22682222)
UniProt PMID:22682222 MGI:5428058 NCBI chrNW_004955467:13,169,072...13,209,585 JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (MGI:6451247|PMID:31786261) MGI PMID:31786261 MGI:6451247 NCBI chrNW_004955415:1,138,297...1,219,241
Ensembl chrNW_004955415:1,137,327...1,219,241
JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chrNW_004955541:2,103,437...2,129,668
Ensembl chrNW_004955541:2,103,384...2,130,310
JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109
JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chrNW_004955514:598,840...603,390
Ensembl chrNW_004955514:596,829...604,051
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) BHF-UCL PMID:19100238 MGI:3831067 NCBI chrNW_004955447:5,292,708...5,345,214
Ensembl chrNW_004955447:5,293,227...5,330,187
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762
JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chrNW_004955495:5,539,382...5,557,441
Ensembl chrNW_004955495:5,539,889...5,557,441
JBrowse link
G Tfpi tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chrNW_004955403:10,925,155...11,004,229
Ensembl chrNW_004955403:10,924,893...11,004,284
JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513
JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in ISO (PMID:19412184)
(PMID:22685567)
UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004955411:31,010,373...31,042,321 JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
ISO (MGI:4421230|PMID:20051628), (MGI:5462034|PMID:21880694)
(MGI:6244743|PMID:28096568)
(MGI:1860539|PMID:10880523), (MGI:5604854|PMID:24740015)
(MGI:2686801|PMID:14691481)
(PMID:30321456)
(PMID:11432859)
RGD
BHF-UCL
ARUK-UCL
MGI
UniProt
PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:20438866 More... MGI:1860539 MGI:2686801 MGI:4421230 MGI:5462034 MGI:5604854 MGI:6244743 RGD:7777075 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tlr5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chrNW_004955520:1,544,840...1,562,081
Ensembl chrNW_004955520:1,556,523...1,559,093
JBrowse link
G Tlr9 toll like receptor 9 ISO RGD PMID:20655116 PMID:21308757 RGD:5129495 RGD:5130179 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371) RGD
MGI
PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... MGI:3828894 MGI:4437182 MGI:5013875 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) BHF-UCL PMID:19912257 PMID:21127049 PMID:21220427 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004955486:1,790,531...1,817,986
Ensembl chrNW_004955486:1,792,115...1,818,362
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) BHF-UCL PMID:20844189 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004955514:1,682,641...1,687,881 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249 NCBI chrNW_004955428:19,479,633...19,511,738
Ensembl chrNW_004955428:19,479,638...19,511,758
JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100
JBrowse link
G Trim41 tripartite motif containing 41 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955530:84,683...95,835
Ensembl chrNW_004955530:84,683...95,835
JBrowse link
G Tspo translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:26255671) UniProt PMID:26255671 NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176
JBrowse link
G Vim vimentin involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554
JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chrNW_004955434:7,013,092...7,050,103
Ensembl chrNW_004955434:7,013,092...7,050,103
JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chrNW_004955413:3,672,470...3,825,588
Ensembl chrNW_004955413:3,672,470...3,819,571
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) UniProt PMID:18174455 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154)
(MGI:5605956|PMID:12612580)
UniProt PMID:11460154 PMID:12612580 MGI:5605956 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:25861989)
(MGI:3842851|PMID:19322177), (MGI:5142149|PMID:21616078), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
(PMID:18178554), (PMID:19909337), (PMID:22055188)
UniProt PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 More... MGI:3842851 MGI:5142149 MGI:5706859 MGI:5751631 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:14679154), (PMID:15187101)
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499)
(MGI:5795816|PMID:22844456)
(PMID:14766228)
UniProt PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chrNW_004955453:6,846,625...6,850,007
Ensembl chrNW_004955453:6,846,549...6,850,031
JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within ISO (PMID:12594207) MGI PMID:12594207 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042)
(MGI:3587138|PMID:16061696)
MGI PMID:15690042 PMID:16061696 MGI:3528769 MGI:3587138 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO (PMID:26649771) UniProt PMID:26649771 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:26649771) UniProt PMID:26649771 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chrNW_004955412:27,303,548...27,315,031
Ensembl chrNW_004955412:27,312,489...27,315,031
JBrowse link
G Tlr2 toll like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:26649771)
(PMID:12594207)
(MGI:3528769|PMID:15690042)
UniProt
MGI
PMID:12594207 PMID:15690042 PMID:26649771 MGI:3528769 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within ISO (MGI:2178646|PMID:10549626) MGI PMID:10549626 MGI:2178646 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chrNW_004955404:30,254,934...30,266,898
Ensembl chrNW_004955404:30,254,841...30,270,921
JBrowse link
G Cd14 CD14 molecule involved_in ISO (PMID:15039339) CAFA PMID:15039339 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224
JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (PMID:31285585)
(MGI:6383257|PMID:31285585)
UniProt PMID:31285585 MGI:6383257 NCBI chrNW_004955461:4,634,324...4,786,723
Ensembl chrNW_004955461:4,632,263...4,662,016
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (MGI:3608295|PMID:12385742) MGI PMID:12385742 MGI:3608295 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:16601243) BHF-UCL PMID:16601243 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918
JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:19853610 RGD:2325979 NCBI chrNW_004955412:14,630,109...14,923,847
Ensembl chrNW_004955412:14,630,443...14,923,926
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:23908241) UniProt PMID:23908241 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Tnf tumor necrosis factor ISO streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4835148|PMID:16601243) BHF-UCL PMID:16601243 MGI:4835148 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
cellular response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase ISO RGD PMID:10744701 RGD:1600536 NCBI chrNW_004955503:7,483,819...7,515,085
Ensembl chrNW_004955503:7,482,793...7,515,120
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (MGI:5803730|PMID:27288407) UniProt PMID:27288407 MGI:5803730 NCBI chrNW_004955467:10,547,706...10,578,355
Ensembl chrNW_004955467:10,547,294...10,578,387
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (MGI:3576850|PMID:15845454) UniProt PMID:15845454 MGI:3576850 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (MGI:5790524|PMID:27374331) CAFA PMID:27374331 MGI:5790524 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) RGD
MGI
PMID:16949315 PMID:24169446 MGI:3686795 RGD:13204728 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:24955228) UniProt PMID:24955228 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:2176422|PMID:11894098) MGI PMID:11894098 MGI:2176422 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) MGI PMID:16949315 MGI:3686795 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:16880211) UniProt PMID:16880211 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224
JBrowse link
G Tlr1 toll like receptor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
UniProt
MGI
PMID:16880211 PMID:19931471 NCBI chrNW_004955443:8,442,419...8,450,318
Ensembl chrNW_004955443:8,447,956...8,450,382
JBrowse link
G Tlr2 toll like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
UniProt
MGI
PMID:16880211 PMID:19931471 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link
cellular response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igfbpl1 insulin like growth factor binding protein like 1 involved_in ISO (PMID:15845387) UniProt PMID:15845387 NCBI chrNW_004955419:28,133,512...28,148,462
Ensembl chrNW_004955419:28,133,527...28,144,578
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:11306509) UniProt PMID:11306509 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Notch2 notch receptor 2 involved_in ISO (PMID:11306509) UniProt PMID:11306509 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173
JBrowse link
G Txnip thioredoxin interacting protein involved_in ISO (PMID:18541147) UniProt PMID:18541147 NCBI chrNW_004955568:103,801...107,791
Ensembl chrNW_004955568:103,762...107,785
JBrowse link
cellular response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chrNW_004955425:3,581,705...3,588,528 JBrowse link
G Nr1i2 nuclear receptor subfamily 1 group I member 2 involved_in ISO (PMID:24525126) AgBase PMID:24525126 NCBI chrNW_004955427:19,459,936...19,487,276
Ensembl chrNW_004955427:19,459,936...19,487,276
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:6103025|PMID:28835460) MGI PMID:28835460 MGI:6103025 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
cellular response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938
JBrowse link
G Arf1 ADP ribosylation factor 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955581:319,942...335,112
Ensembl chrNW_004955581:319,942...335,112
JBrowse link
G Atf2 activating transcription factor 2 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:25609812) UniProt PMID:25609812 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Calr calreticulin ISO RGD PMID:31399043 RGD:151347548 NCBI chrNW_004955415:31,985,147...31,989,372
Ensembl chrNW_004955415:31,985,147...31,989,372
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:25754930) UniProt PMID:25754930 NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:28146100) ARUK-UCL PMID:28146100 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:24784232)
(MGI:5583923|PMID:24784232)
CAFA PMID:24784232 MGI:5583923 NCBI chrNW_004955507:6,066,026...6,102,066
Ensembl chrNW_004955507:6,067,203...6,102,001
JBrowse link
G Crebbp CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:2151262 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:28146100) ARUK-UCL PMID:28146100 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927
JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 ISO RGD PMID:31442273 RGD:150540302 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643
JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:31575075) UniProt PMID:31575075 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Eif5a eukaryotic translation initiation factor 5A involved_in ISO (PMID:8596953), (PMID:9465063) UniProt PMID:8596953 PMID:9465063 NCBI chrNW_004955467:9,603,800...9,608,490 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:6478092|PMID:25741008) MGI PMID:25741008 MGI:6478092 NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100
JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:4452060|PMID:20457904) MGI PMID:20457904 MGI:4452060 NCBI chrNW_004955497:7,357,533...7,441,215
Ensembl chrNW_004955497:7,357,212...7,461,439
JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (PMID:24514761) UniProt PMID:24514761 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955485:8,006,161...8,126,074
Ensembl chrNW_004955485:8,006,706...8,115,561
JBrowse link
G Gli2 GLI family zinc finger 2 involved_in ISO (PMID:9557682) UniProt PMID:9557682 NCBI chrNW_004955459:8,892,917...9,124,672
Ensembl chrNW_004955459:8,892,869...9,118,499
JBrowse link
G Gsdme gasdermin E involved_in ISO (PMID:28045099)
(MGI:5901785|PMID:28045099)
UniProt PMID:28045099 MGI:5901785 NCBI chrNW_004955410:26,700,977...26,761,683
Ensembl chrNW_004955410:26,701,893...26,769,989
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (PMID:32697943) UniProt PMID:32697943 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:25609812) UniProt PMID:25609812 NCBI chrNW_004955538:1,469,544...1,475,010
Ensembl chrNW_004955538:1,469,544...1,475,019
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in ISO (PMID:28146100) ARUK-UCL PMID:28146100 NCBI chrNW_004955449:11,538,869...11,596,502
Ensembl chrNW_004955449:11,538,889...11,593,349
JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (MGI:5645191|PMID:24882218)
(PMID:28146100)
UniProt
ARUK-UCL
PMID:24882218 PMID:28146100 MGI:5645191 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004955406:42,056,014...42,077,701
Ensembl chrNW_004955406:42,056,014...42,077,701
JBrowse link
G Il10 interleukin 10 ISO porcine reproductive and respiratory syndrome virus RGD PMID:31442273 RGD:150540302 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:25754930) UniProt PMID:25754930 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il21 interleukin 21 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955428:18,057,096...18,065,492
Ensembl chrNW_004955428:18,057,096...18,065,492
JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:25609812)
(MGI:3818095|PMID:18802055)
UniProt
MGI
PMID:18802055 PMID:25609812 MGI:3818095 NCBI chrNW_004955559:1,223,986...1,228,671
Ensembl chrNW_004955559:1,224,874...1,228,624
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Lgals8 galectin 8 involved_in ISO (PMID:28077878) UniProt PMID:28077878 NCBI chrNW_004955492:3,673,233...3,693,777
Ensembl chrNW_004955492:3,673,233...3,693,776
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:25754930)
(MGI:5491117|PMID:23408620)
UniProt PMID:23408620 PMID:25754930 MGI:5491117 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in ISO (PMID:25754930) UniProt PMID:25754930 NCBI chrNW_004955413:33,287,860...33,293,948
Ensembl chrNW_004955413:33,286,390...33,294,227
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO (PMID:25754930) UniProt PMID:25754930 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO (MGI:5583923|PMID:24784232) CAFA PMID:24784232 MGI:5583923 NCBI chrNW_004955412:6,045,146...6,057,112
Ensembl chrNW_004955412:6,045,100...6,057,262
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885
JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:33231615) UniProt PMID:33231615 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410
JBrowse link
G Penk proenkephalin ISO RGD PMID:8411369 RGD:10003023 NCBI chrNW_004955454:15,425,712...15,426,685
Ensembl chrNW_004955454:15,426,017...15,426,685
JBrowse link
G Pou2af1 POU class 2 homeobox associating factor 1 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955412:13,131,229...13,167,150
Ensembl chrNW_004955412:13,131,168...13,156,128
JBrowse link
G Pou2f2 POU class 2 homeobox 2 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004955555:759,308...793,500
Ensembl chrNW_004955555:759,308...793,485
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO RGD PMID:9001385 RGD:9850285 NCBI chrNW_004955437:1,513,425...1,516,164
Ensembl chrNW_004955437:1,513,418...1,516,164
JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:24807708) UniProt PMID:24807708 NCBI chrNW_004955402:11,649,160...11,670,010
Ensembl chrNW_004955402:11,648,849...11,672,545
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (PMID:26311876) UniProt PMID:26311876 NCBI chrNW_004955407:38,553,866...38,577,547
Ensembl chrNW_004955407:38,553,814...38,577,465
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chrNW_004955403:22,977,882...23,001,392
Ensembl chrNW_004955403:22,979,120...23,001,467
JBrowse link
G Tlr7 toll like receptor 7 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chrNW_004955544:424,897...443,562
Ensembl chrNW_004955544:424,850...443,564
JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in ISO (PMID:25609812) UniProt PMID:25609812 NCBI chrNW_004955427:1,874,277...1,908,245
Ensembl chrNW_004955427:1,876,222...1,908,737
JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004955414:21,495,593...21,513,703
Ensembl chrNW_004955414:21,481,129...21,514,548
JBrowse link
G Vwce von Willebrand factor C and EGF domains involved_in ISO (PMID:16496348) UniProt PMID:16496348 NCBI chrNW_004955511:6,235,934...6,251,186
Ensembl chrNW_004955511:6,235,530...6,251,216
JBrowse link
G Wdfy4 WDFY family member 4 acts_upstream_of_or_within ISO (MGI:6257237|PMID:30409884) MGI PMID:30409884 MGI:6257237 NCBI chrNW_004955556:1,178,970...1,421,139
Ensembl chrNW_004955556:1,177,117...1,421,228
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:23355615) UniProt PMID:23355615 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO RGD PMID:20226086 RGD:13673889 NCBI chrNW_004955494:3,925,478...3,985,469
Ensembl chrNW_004955494:3,926,413...3,983,736
JBrowse link
complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfb complement factor B acts_upstream_of_or_within ISO (MGI:1096110|PMID:9238044)
(MGI:6100611|PMID:27564415)
MGI PMID:9238044 PMID:27564415 MGI:1096110 MGI:6100611 NCBI chrNW_004955437:461,235...466,908 JBrowse link
G Cfd complement factor D acts_upstream_of_or_within ISO (MGI:6100611|PMID:27564415) MGI PMID:27564415 MGI:6100611 NCBI chrNW_004955495:6,955,612...6,961,317 JBrowse link
G Cfp complement factor properdin involved_in ISO (MGI:3773929|PMID:18292556) MGI PMID:18292556 MGI:3773929 NCBI chrNW_004955516:449,993...455,897
Ensembl chrNW_004955516:449,993...456,492
JBrowse link
G Cr2 complement C3d receptor 2 involved_in ISO (PMID:11981823) ARUK-UCL PMID:11981823 NCBI chrNW_004955406:42,877,041...42,910,970
Ensembl chrNW_004955406:42,876,966...42,911,564
JBrowse link
complement activation, lectin pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colec10 collectin subfamily member 10 involved_in ISO (PMID:24174618) ComplexPortal PMID:24174618 NCBI chrNW_004955417:24,954,969...24,994,188
Ensembl chrNW_004955417:24,954,938...24,994,188
JBrowse link
G Colec11 collectin subfamily member 11 involved_in ISO (PMID:25912189)
(PMID:24174618)
UniProt
ComplexPortal
PMID:24174618 PMID:25912189 NCBI chrNW_004955487:3,778,901...3,789,852
Ensembl chrNW_004955487:3,778,858...3,790,080
JBrowse link
G Fcn1 ficolin 1 involved_in ISO (PMID:16116205) ComplexPortal PMID:16116205 NCBI chrNW_004955513:3,690,550...3,697,785
Ensembl chrNW_004955513:3,687,232...3,698,673
JBrowse link
G Fcn3 ficolin 3 involved_in
acts_upstream_of_or_within
ISO (PMID:11907111)
(MGI:5473786|PMID:16328467)
UniProt
MGI
PMID:11907111 PMID:16328467 MGI:5473786 NCBI chrNW_004955452:6,630,548...6,635,334
Ensembl chrNW_004955452:6,630,505...6,635,235
JBrowse link
G Krt1 keratin 1 involved_in ISO (PMID:11549596) UniProt PMID:11549596 NCBI chrNW_004955458:25,193...29,282
Ensembl chrNW_004955458:25,187...29,208
JBrowse link
G Masp1 MBL associated serine protease 1 involved_in ISO (PMID:17182967)
(PMID:10679061), (PMID:11907111), (PMID:16116205), (PMID:22691502), (PMID:24174618)
(MGI:3789229|PMID:18424734)
UniProt
ComplexPortal
PMID:10679061 PMID:11907111 PMID:16116205 PMID:17182967 PMID:18424734 More... MGI:3789229 NCBI chrNW_004955420:20,540,266...20,605,830
Ensembl chrNW_004955420:20,540,016...20,605,854
JBrowse link
G Masp2 MBL associated serine protease 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5473786|PMID:16328467)
(PMID:10679061), (PMID:11907111), (PMID:16116205), (PMID:17182967), (PMID:22691502), (PMID:24174618), (PMID:9087411)
MGI
ComplexPortal
PMID:9087411 PMID:10679061 PMID:11907111 PMID:16116205 PMID:16328467 More... MGI:5473786 NCBI chrNW_004955486:2,641,730...2,655,125 JBrowse link
G Mbl2 mannose binding lectin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:11549596)
(PMID:22691502), (PMID:35102342)
(PMID:15148336)
(MGI:3577322|PMID:15148336)
UniProt
ComplexPortal
MGI
PMID:11549596 PMID:15148336 PMID:22691502 PMID:35102342 MGI:3577322 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006
JBrowse link
contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in ISO (PMID:9422511) BHF-UCL PMID:9422511 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Tspo translocator protein ISO RGD PMID:18190798 RGD:2317142 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:17974916) UniProt PMID:17974916 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G F2 coagulation factor II, thrombin involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chrNW_004955422:1,356,675...1,367,788
Ensembl chrNW_004955422:1,356,769...1,367,517
JBrowse link
G Hrg histidine rich glycoprotein involved_in ISO (PMID:18797515) UniProt PMID:18797515 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) UniProt PMID:23006328 NCBI chrNW_004955547:2,902,962...2,907,670 JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) UniProt PMID:22083756 NCBI chrNW_004955422:25,757,558...25,760,054
Ensembl chrNW_004955422:25,757,558...25,759,769
JBrowse link
cytoplasmic pattern recognition receptor signaling pathway in response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:19211564) UniProt PMID:19211564 NCBI chrNW_004955451:16,186,263...16,191,928
Ensembl chrNW_004955451:16,185,510...16,191,719
JBrowse link
defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 acts_upstream_of_or_within ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chrNW_004955468:12,950,333...12,958,599
Ensembl chrNW_004955468:12,951,155...12,958,212
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 acts_upstream_of_or_within ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chrNW_004955407:26,597,165...26,643,972
Ensembl chrNW_004955407:26,603,479...26,643,103
JBrowse link
G Akirin2 akirin 2 involved_in ISO (MGI:5607662|PMID:25107474) UniProt PMID:25107474 MGI:5607662 NCBI chrNW_004955411:14,600,106...14,619,374
Ensembl chrNW_004955411:14,600,106...14,619,069
JBrowse link
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:23711367) UniProt PMID:23711367 NCBI chrNW_004955447:259,654...376,147
Ensembl chrNW_004955447:259,655...376,147
JBrowse link
G Anxa3 annexin A3 involved_in ISO (PMID:9497492) UniProt PMID:9497492 NCBI chrNW_004955433:2,981,113...3,043,894
Ensembl chrNW_004955433:2,977,513...3,044,446
JBrowse link
G Bcl3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (MGI:85481|PMID:9009202) MGI PMID:9009202 MGI:85481 NCBI chrNW_004955555:1,898,280...1,911,466
Ensembl chrNW_004955555:1,856,250...1,911,466
JBrowse link
G Bpi bactericidal permeability increasing protein ISO RGD PMID:11445707 RGD:1331346 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980
JBrowse link
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within ISO (MGI:5504542|PMID:23670560)
(PMID:21115716)
MGI PMID:21115716 PMID:23670560 MGI:5504542 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Cebpb CCAAT enhancer binding protein beta involved_in ISO (MGI:4360613|PMID:17911624) UniProt PMID:17911624 MGI:4360613 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Clec4d C-type lectin domain family 4 member D acts_upstream_of_or_within ISO (MGI:5525050|PMID:23602766) MGI PMID:23602766 MGI:5525050 NCBI chrNW_004955413:5,267,548...5,276,969
Ensembl chrNW_004955413:5,267,161...5,277,090
JBrowse link
G Clec4e C-type lectin domain family 4 member E acts_upstream_of_or_within ISO (MGI:5525050|PMID:23602766) MGI PMID:23602766 MGI:5525050 NCBI chrNW_004955413:5,256,523...5,261,385
Ensembl chrNW_004955413:5,256,440...5,262,938
JBrowse link
G Coch cochlin acts_upstream_of_or_within ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chrNW_004955409:29,639,274...29,650,389
Ensembl chrNW_004955409:29,639,274...29,650,874
JBrowse link
G Colec12 collectin subfamily member 12 involved_in ISO (PMID:11564734) UniProt PMID:11564734 NCBI chrNW_004955402:9,445,419...9,614,956
Ensembl chrNW_004955402:9,468,421...9,614,286
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in ISO (PMID:17562761) BHF-UCL PMID:17562761 NCBI chrNW_004955433:2,123,190...2,129,119 JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in ISO (MGI:6505029|PMID:33483420) UniProt PMID:33483420 MGI:6505029 NCBI chrNW_004955480:451,126...502,226
Ensembl chrNW_004955480:451,126...502,226
JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (MGI:2683721|PMID:11237803) MGI PMID:11237803 MGI:2683721 NCBI chrNW_004955468:12,971,931...12,975,206
Ensembl chrNW_004955468:12,971,931...12,975,206
JBrowse link
G Hamp hepcidin antimicrobial peptide acts_upstream_of_or_within ISO (MGI:1931951|PMID:11113131)
(MGI:5502531|PMID:23390527)
MGI PMID:11113131 PMID:23390527 MGI:1931951 MGI:5502531 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Ifnb1 interferon beta 1 acts_upstream_of_or_within ISO (MGI:3051174|PMID:15240719) MGI PMID:15240719 MGI:3051174 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Ifne interferon epsilon involved_in ISO (MGI:5493380|PMID:23449591) UniProt PMID:23449591 MGI:5493380 NCBI chrNW_004955472:12,795,352...12,801,035 JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3051174|PMID:15240719) MGI PMID:15240719 MGI:3051174 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO (MGI:1861065|PMID:10899905) MGI PMID:10899905 MGI:1861065 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO (MGI:3773503|PMID:18045875) MGI PMID:18045875 MGI:3773503 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)
UniProt PMID:16888103 MGI:3656111 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:22859821)
(MGI:5437528|PMID:22859821)
UniProt PMID:22859821 MGI:5437528 NCBI chrNW_004955486:9,706,878...9,707,876
Ensembl chrNW_004955486:9,706,703...9,707,949
JBrowse link
G Lgals4 galectin 4 acts_upstream_of_or_within ISO (MGI:6507238|PMID:27427436) MGI PMID:27427436 MGI:6507238 NCBI chrNW_004955468:694,831...701,623
Ensembl chrNW_004955468:694,873...701,535
JBrowse link
G LOC102004444 beta-defensin 1-like acts_upstream_of_or_within ISO (PMID:21115716) MGI PMID:21115716 NCBI chrNW_004955403:53,643,328...53,644,361
Ensembl chrNW_004955403:53,643,300...53,644,505
JBrowse link
G Lpo lactoperoxidase involved_in ISO (PMID:12626341) UniProt PMID:12626341 NCBI chrNW_004955451:4,754,572...4,769,380
Ensembl chrNW_004955451:4,754,468...4,769,553
JBrowse link
G Lyg2 lysozyme g2 involved_in ISO (PMID:21093056) UniProt PMID:21093056 NCBI chrNW_004955470:5,533,188...5,540,957
Ensembl chrNW_004955470:5,533,188...5,540,957
JBrowse link
G Lyst lysosomal trafficking regulator acts_upstream_of_or_within ISO (MGI:53883|PMID:4589319), (MGI:53949|PMID:4601767), (MGI:68578|PMID:7988496) MGI PMID:4589319 PMID:4601767 PMID:7988496 MGI:53883 MGI:53949 MGI:68578 NCBI chrNW_004955492:4,161,976...4,371,637
Ensembl chrNW_004955492:4,209,749...4,369,762
JBrowse link
G Lyzl4 lysozyme like 4 NOT|involved_in ISO (MGI:5882876|PMID:21444326) UniProt PMID:21444326 MGI:5882876 NCBI chrNW_004955420:28,333,984...28,344,180
Ensembl chrNW_004955420:28,336,162...28,344,635
JBrowse link
G Lyzl6 lysozyme like 6 involved_in ISO (PMID:24013621), (PMID:28182716) UniProt PMID:24013621 PMID:28182716 NCBI chrNW_004955481:225,132...273,565
Ensembl chrNW_004955481:223,484...237,975
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:19631370) UniProt PMID:19631370 NCBI chrNW_004955415:14,691,918...14,704,782
Ensembl chrNW_004955415:14,695,438...14,703,672
JBrowse link
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chrNW_004955412:5,780,772...5,792,485
Ensembl chrNW_004955412:5,778,502...5,792,445
JBrowse link
G Mpeg1 macrophage expressed 1 involved_in ISO (MGI:6208630|PMID:26402460)
(PMID:26402460), (PMID:33224153)
UniProt PMID:26402460 PMID:33224153 MGI:6208630 NCBI chrNW_004955511:3,783,200...3,787,300
Ensembl chrNW_004955511:3,785,019...3,787,154
JBrowse link
G Muc5b mucin 5B, oligomeric mucus/gel-forming acts_upstream_of_or_within ISO (MGI:5554612|PMID:24317696) MGI PMID:24317696 MGI:5554612 NCBI chrNW_004955476:11,021,665...11,049,239 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:20219467) BHF-UCL PMID:20219467 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138
JBrowse link
G Naip NLR family apoptosis inhibitory protein involved_in ISO (MGI:5289703|PMID:21874021) UniProt PMID:21874021 MGI:5289703 NCBI chrNW_004955575:249,659...283,378 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (MGI:86599|PMID:9116268)
(MGI:3718167|PMID:17526748)
MGI PMID:9116268 PMID:17526748 MGI:3718167 MGI:86599 NCBI chrNW_004955456:13,353,780...13,363,956
Ensembl chrNW_004955456:13,354,011...13,363,891
JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (PMID:15107016)
(MGI:3662989|PMID:16648853), (MGI:3662990|PMID:16648852), (MGI:5289703|PMID:21874021), (MGI:5428366|PMID:22484733), (MGI:5444805|PMID:22885697)
HGNC-UCL
UniProt
PMID:15107016 PMID:16648852 PMID:16648853 PMID:21874021 PMID:22484733 More... MGI:3662989 MGI:3662990 MGI:5289703 MGI:5428366 MGI:5444805 NCBI chrNW_004955441:570,853...607,529
Ensembl chrNW_004955441:570,880...603,128
JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:15653568) HGNC-UCL PMID:15653568 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:15653568) HGNC-UCL PMID:15653568 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:9284131)
(MGI:2673089|PMID:12933833)
BHF-UCL
MGI
PMID:9284131 PMID:12933833 MGI:2673089 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO (MGI:5562510|PMID:23913046) MGI PMID:23913046 MGI:5562510 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173
JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:3620334|PMID:16473946) UniProt PMID:16473946 MGI:3620334 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
G Oas2 2'-5'-oligoadenylate synthetase 2 involved_in ISO (PMID:30822544) ARUK-UCL PMID:30822544 NCBI chrNW_004955482:9,365,400...9,386,314
Ensembl chrNW_004955482:9,364,516...9,386,852
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:30822544) ARUK-UCL PMID:30822544 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
G Plac8 placenta associated 8 acts_upstream_of_or_within ISO (MGI:3834064|PMID:17404296) MGI PMID:17404296 MGI:3834064 NCBI chrNW_004955474:6,518,459...6,533,251
Ensembl chrNW_004955474:6,522,204...6,534,312
JBrowse link
G Prkcd protein kinase C delta involved_in ISO (MGI:5444805|PMID:22885697) UniProt PMID:22885697 MGI:5444805 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:22939626) UniProt PMID:22939626 NCBI chrNW_004955424:19,393,589...19,421,373
Ensembl chrNW_004955424:19,393,589...19,421,373
JBrowse link
G Rag2 recombination activating 2 acts_upstream_of_or_within ISO (MGI:3032861|PMID:14766966) MGI PMID:14766966 MGI:3032861 NCBI chrNW_004955422:9,867,307...9,869,732
Ensembl chrNW_004955422:9,867,307...9,869,732
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chrNW_004955597:272,352...289,348
Ensembl chrNW_004955597:271,897...289,348
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (MGI:2178898|PMID:11967543) MGI PMID:11967543 MGI:2178898 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228
JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:34012115)
(MGI:6729754|PMID:34012115)
UniProt PMID:34012115 MGI:6729754 NCBI chrNW_004955506:2,498,339...2,598,363
Ensembl chrNW_004955506:2,499,770...2,596,989
JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chrNW_004955409:36,240,008...36,252,166 JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) UniProt PMID:22083756 NCBI chrNW_004955422:25,757,558...25,760,054
Ensembl chrNW_004955422:25,757,558...25,759,769
JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in ISO (PMID:17625598) UniProt PMID:17625598 NCBI chrNW_004955545:261,483...263,689
Ensembl chrNW_004955545:261,323...264,374
JBrowse link
G Sharpin SHANK associated RH domain interactor involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chrNW_004955454:2,761,725...2,765,929
Ensembl chrNW_004955454:2,761,725...2,765,929
JBrowse link
G Shc1 SHC adaptor protein 1 involved_in ISO (PMID:20624904) CAFA PMID:20624904 NCBI chrNW_004955545:1,468,391...1,479,209
Ensembl chrNW_004955545:1,468,391...1,476,814
JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (MGI:5442671|PMID:22593622) MGI PMID:22593622 MGI:5442671 NCBI chrNW_004955468:11,623,092...11,632,566
Ensembl chrNW_004955468:11,623,197...11,632,573
JBrowse link
G Slamf9 SLAM family member 9 acts_upstream_of_or_within ISO (MGI:6415747|PMID:31880316) MGI PMID:31880316 MGI:6415747 NCBI chrNW_004955468:11,745,694...11,771,376
Ensembl chrNW_004955468:11,745,868...11,748,510
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (MGI:3773503|PMID:18045875), (MGI:54685|PMID:385184), (MGI:60911|PMID:1541907)
(MGI:3788936|PMID:18285491)
(MGI:75899|PMID:7650477)
MGI PMID:385184 PMID:1541907 PMID:7650477 PMID:18045875 PMID:18285491 MGI:3773503 MGI:3788936 MGI:54685 MGI:60911 MGI:75899 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608
JBrowse link
G Spn sialophorin acts_upstream_of_or_within ISO (MGI:1861065|PMID:10899905)
(PMID:10899905)
MGI PMID:10899905 MGI:1861065 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chrNW_004955514:598,840...603,390
Ensembl chrNW_004955514:596,829...604,051
JBrowse link
G Stab1 stabilin 1 involved_in ISO (PMID:12077138) UniProt PMID:12077138 NCBI chrNW_004955430:2,491,960...2,518,063
Ensembl chrNW_004955430:2,491,974...2,518,063
JBrowse link
G Stab2 stabilin 2 involved_in ISO (PMID:12077138) UniProt PMID:12077138 NCBI chrNW_004955405:38,393,636...38,533,701
Ensembl chrNW_004955405:38,393,650...38,533,815
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (MGI:4414596|PMID:19797524) UniProt PMID:19797524 MGI:4414596 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:30321456) ARUK-UCL PMID:30321456 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135
JBrowse link
G Tmf1 TATA element modulatory factor 1 acts_upstream_of_or_within ISO (MGI:5440392|PMID:22553199) MGI PMID:22553199 MGI:5440392 NCBI chrNW_004955421:18,810,199...18,837,767
Ensembl chrNW_004955421:18,810,199...18,837,761
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:1861065|PMID:10899905) MGI PMID:10899905 MGI:1861065 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A acts_upstream_of_or_within ISO (MGI:1097215|PMID:9324362) MGI PMID:9324362 MGI:1097215 NCBI chrNW_004955413:3,982,670...3,996,320
Ensembl chrNW_004955413:3,981,400...3,996,021
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6201658|PMID:30232263) UniProt PMID:30232263 MGI:6201658 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697
JBrowse link
G Znfx1 zinc finger NFX1-type containing 1 involved_in ISO (PMID:33876776) UniProt PMID:33876776 NCBI chrNW_004955445:8,854,539...8,879,822
Ensembl chrNW_004955445:8,854,610...8,879,821
JBrowse link
defense response to fungus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cotl1 coactosin like F-actin binding protein 1 involved_in ISO (MGI:2157200|PMID:11785969) UniProt PMID:11785969 MGI:2157200 NCBI chrNW_004955541:153,542...183,965
Ensembl chrNW_004955541:153,542...183,965
JBrowse link
G CUNH10orf99 chromosome unknown C10orf99 homolog involved_in ISO (PMID:25585381) UniProt PMID:25585381 NCBI chrNW_004955510:3,697,163...3,703,108 JBrowse link
G Dcd dermcidin involved_in ISO (PMID:11694882) UniProt PMID:11694882 NCBI chrNW_004955458:1,875,244...1,879,434 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) UniProt PMID:22832495 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783
JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in
acts_upstream_of_or_within
ISO (PMID:11113131)
(MGI:56499|PMID:2995362)
UniProt
MGI
PMID:2995362 PMID:11113131 MGI:56499 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Hrg histidine rich glycoprotein involved_in ISO (PMID:18797515)
(MGI:5294287|PMID:18797515)
UniProt PMID:18797515 MGI:5294287 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Il17a interleukin 17A involved_in ISO (MGI:4462077|PMID:20554964) UniProt PMID:20554964 MGI:4462077 NCBI chrNW_004955411:5,896,435...5,899,911
Ensembl chrNW_004955411:5,896,702...5,900,962
JBrowse link
G Il17ra interleukin 17 receptor A involved_in ISO (MGI:4462077|PMID:20554964) UniProt PMID:20554964 MGI:4462077 NCBI chrNW_004955454:5,230,384...5,252,769
Ensembl chrNW_004955454:5,230,522...5,254,394
JBrowse link
G Il17rc interleukin 17 receptor C involved_in ISO (MGI:4462077|PMID:20554964) UniProt PMID:20554964 MGI:4462077 NCBI chrNW_004955561:1,410,100...1,423,041
Ensembl chrNW_004955561:1,410,941...1,423,023
JBrowse link
G Jagn1 jagunal homolog 1 involved_in ISO (MGI:5604054|PMID:25129145) UniProt PMID:25129145 MGI:5604054 NCBI chrNW_004955561:1,388,592...1,392,107
Ensembl chrNW_004955561:1,388,592...1,392,107
JBrowse link
G Leap2 liver enriched antimicrobial peptide 2 involved_in ISO (PMID:12493837) UniProt PMID:12493837 NCBI chrNW_004955408:4,245,574...4,247,117
Ensembl chrNW_004955408:4,245,574...4,247,117
JBrowse link
G Mpo myeloperoxidase acts_upstream_of_or_within ISO (MGI:1333719|PMID:10085024) MGI PMID:10085024 MGI:1333719 NCBI chrNW_004955451:4,743,744...4,753,358
Ensembl chrNW_004955451:4,743,744...4,753,358
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO (MGI:3588470|PMID:16041040)
(MGI:2182072|PMID:10714686)
MGI PMID:10714686 PMID:16041040 MGI:2182072 MGI:3588470 NCBI chrNW_004955456:13,353,780...13,363,956
Ensembl chrNW_004955456:13,354,011...13,363,891
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta acts_upstream_of_or_within ISO (MGI:5550204|PMID:24009720) MGI PMID:24009720 MGI:5550204 NCBI chrNW_004955486:3,813,923...3,837,563
Ensembl chrNW_004955486:3,813,923...3,838,119
JBrowse link
G Rnase7 ribonuclease A family member 7 involved_in ISO (PMID:12244054) UniProt PMID:12244054 NCBI chrNW_004955550:1,796,301...1,797,801 JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chrNW_004955514:598,840...603,390
Ensembl chrNW_004955514:596,829...604,051
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:16272332 RGD:1579756 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tslp thymic stromal lymphopoietin involved_in ISO (PMID:24850429) UniProt PMID:24850429 NCBI chrNW_004955418:4,041,529...4,045,534 JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (MGI:6490907|PMID:33109609) UniProt PMID:33109609 MGI:6490907 NCBI chrNW_004955445:1,867,436...1,878,132
Ensembl chrNW_004955445:1,866,376...1,881,948
JBrowse link
defense response to Gram-negative bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:4939876|PMID:21245295) UniProt PMID:21245295 MGI:4939876 NCBI chrNW_004955454:1,250,261...1,313,547
Ensembl chrNW_004955454:1,237,363...1,314,127
JBrowse link
G Adm adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chrNW_004955414:25,951,473...25,953,593
Ensembl chrNW_004955414:25,951,349...25,953,645
JBrowse link
G App amyloid beta precursor protein involved_in ISO PMID:20209079
(PMID:20209079)
UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:18665841)
(MGI:4457239|PMID:18665841)
UniProt PMID:18665841 MGI:4457239 NCBI chrNW_004955410:32,066,196...32,078,661
Ensembl chrNW_004955410:32,066,196...32,078,717
JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568
JBrowse link
G Bpi bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chrNW_004955445:18,393,854...18,433,948
Ensembl chrNW_004955445:18,391,215...18,427,980
JBrowse link
G Camp cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in
ISO (MGI:87828|PMID:9148921)
(MGI:3770082|PMID:17012259)
(PMID:12759353), (PMID:14978112), (PMID:20209079), (PMID:23537644), (PMID:7529412)
RGD
MGI
UniProt
PMID:7529412 PMID:9148921 PMID:12759353 PMID:14978112 PMID:17012259 More... MGI:3770082 MGI:87828 RGD:2316237 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Cd160 CD160 molecule acts_upstream_of_or_within ISO (MGI:5432939|PMID:22801499) MGI PMID:22801499 MGI:5432939 NCBI chrNW_004955568:365,700...372,149 JBrowse link
G Cd4 CD4 molecule acts_upstream_of_or_within ISO (MGI:2683356|PMID:14688352) MGI PMID:14688352 MGI:2683356 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
G Chga chromogranin A involved_in ISO (PMID:15723172) UniProt PMID:15723172 NCBI chrNW_004955438:15,092,267...15,104,321
Ensembl chrNW_004955438:15,092,394...15,104,381
JBrowse link
G Cst11 cystatin 11 involved_in ISO (PMID:12072414) UniProt PMID:12072414 NCBI chrNW_004955415:30,445,556...30,453,439 JBrowse link
G Dcd dermcidin involved_in ISO (PMID:11694882) UniProt PMID:11694882 NCBI chrNW_004955458:1,875,244...1,879,434 JBrowse link
G Defb118 defensin beta 118 involved_in ISO (PMID:15033915)
(PMID:33224970)
UniProt PMID:15033915 PMID:33224970 NCBI chrNW_004955422:29,554,310...29,560,660 JBrowse link
G Defb119 defensin beta 119 involved_in ISO (PMID:24449502) UniProt PMID:24449502 NCBI chrNW_004955422:29,544,805...29,550,815
Ensembl chrNW_004955422:29,544,725...29,551,024
JBrowse link
G Defb127 defensin beta 127 involved_in ISO (PMID:19373462) UniProt PMID:19373462 NCBI chrNW_004955597:38,613...40,241 JBrowse link
G Defb128 defensin beta 128 involved_in ISO (PMID:15625724) UniProt PMID:15625724 NCBI chrNW_004955597:64,950...66,692
Ensembl chrNW_004955597:64,950...66,692
JBrowse link
G Defb136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chrNW_004955403:53,168,733...53,170,177
Ensembl chrNW_004955403:53,167,242...53,170,281
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 involved_in ISO (PMID:11007786)
(MGI:2670828|PMID:12884308)
UniProt PMID:11007786 PMID:12884308 MGI:2670828 NCBI chrNW_004955477:863,388...899,703 JBrowse link
G Drosha drosha ribonuclease III involved_in ISO (PMID:20180804) UniProt PMID:20180804 NCBI chrNW_004955426:17,387,595...17,505,126
Ensembl chrNW_004955426:17,387,534...17,502,294
JBrowse link
G Gsdmd gasdermin D involved_in ISO (MGI:5796057|PMID:27383986) UniProt PMID:27383986 MGI:5796057 NCBI chrNW_004955454:2,265,759...2,270,569
Ensembl chrNW_004955454:2,265,753...2,271,655
JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO (PMID:11034317), (PMID:11113131) UniProt PMID:11034317 PMID:11113131 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:23877675) AgBase PMID:23877675 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428
JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:15114670), (PMID:20027291) BHF-UCL PMID:15114670 PMID:20027291 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620
JBrowse link
G Il17a interleukin 17A involved_in ISO (MGI:3828868|PMID:19144317) UniProt PMID:19144317 MGI:3828868 NCBI chrNW_004955411:5,896,435...5,899,911
Ensembl chrNW_004955411:5,896,702...5,900,962
JBrowse link
G Il17f interleukin 17F involved_in ISO (MGI:3828868|PMID:19144317) UniProt PMID:19144317 MGI:3828868 NCBI chrNW_004955411:5,852,767...5,859,208
Ensembl chrNW_004955411:5,852,767...5,859,208
JBrowse link
G Il22ra1 interleukin 22 receptor subunit alpha 1 acts_upstream_of_or_within ISO (MGI:5432939|PMID:22801499) MGI PMID:22801499 MGI:5432939 NCBI chrNW_004955452:3,975,597...3,992,809
Ensembl chrNW_004955452:3,972,946...3,992,815