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ONTOLOGY REPORT - ANNOTATIONS


Term:response to biotic stimulus
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Accession:GO:0009607 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:synonym: Not4Curation
 narrow_synonym: response to biotic stress



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activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIM2 absent in melanoma 2 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:134,413,232...134,540,344
Ensembl chr 1:138,210,946...138,221,753
JBrowse link
G CASP6 caspase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:102,186,215...102,201,992
Ensembl chr 4:112,753,988...112,768,836
JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,252,050...71,279,121
Ensembl chr 6:74,544,251...74,566,965
JBrowse link
G HEXIM1 HEXIM P-TEFb complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,175,544...12,180,077
Ensembl chr17:12,353,590...12,354,669
JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723
JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424
JBrowse link
G LOC100976317 RNA-binding protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,974,158...61,984,922
Ensembl chr11:65,298,404...65,349,183
JBrowse link
G LOC100986336 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,163,388...52,181,473
Ensembl chr 3:53,400,191...53,410,743
JBrowse link
G MATR3 matrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:134,664,893...134,702,566 JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,885,044...3,903,554
Ensembl chr20:3,659,559...3,701,089
JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:134,190,768...134,208,723
Ensembl chr 1:137,992,523...137,999,587
JBrowse link
G NLRC4 NLR family CARD domain containing 4 involved_in ISO (MGI:3662990|PMID:16648852) UniProt PMID:16648852 MGI:3662990 NCBI chr2A:32,241,782...32,284,041
Ensembl chr2A:32,954,185...32,996,465
JBrowse link
G NONO non-POU domain containing octamer binding involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:60,547,277...60,564,845
Ensembl chr  X:70,602,456...70,619,956
JBrowse link
G PQBP1 polyglutamine binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,188,244...41,200,312
Ensembl chr  X:49,053,030...49,058,585
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299
JBrowse link
G PSPC1 paraspeckle component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,001,131...1,106,627
Ensembl chr13:19,347,276...19,428,997
JBrowse link
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,764,386...23,765,732
Ensembl chr16:31,571,363...31,573,828
JBrowse link
G PYDC5 pyrin domain containing 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:134,354,730...134,355,243 JBrowse link
G PYHIN1 pyrin and HIN domain family member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:134,283,998...134,329,531
Ensembl chr 1:138,081,611...138,127,115
JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:34,444,105...34,461,012
Ensembl chr 1:35,632,917...35,641,551
JBrowse link
G SIN3A SIN3 transcription regulator family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:54,285,587...54,371,376
Ensembl chr15:73,881,500...73,966,506
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 5:134,845,689...134,852,938
Ensembl chr 5:140,967,399...140,973,846
JBrowse link
G TBK1 TANK binding kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530402|PMID:15661922) MGI
Ensembl
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr12:24,419,271...24,469,164
Ensembl chr12:24,917,246...24,968,587
JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530402|PMID:15661922) MGI
Ensembl
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,459,180...97,497,175
Ensembl chr 3:104,139,473...104,178,074
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758
JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314
JBrowse link
G ZBP1 Z-DNA binding protein 1 involved_in ISO (MGI:6434626|PMID:32296175), (MGI:6436412|PMID:32200799)
(MGI:6453154|PMID:32350114), (MGI:6490907|PMID:33109609)
UniProt PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 MGI:6434626 MGI:6436412 MGI:6453154 MGI:6490907 NCBI chr20:53,944,224...53,961,362
Ensembl chr20:55,222,405...55,239,130
JBrowse link
G ZCCHC3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30135424), (PMID:30193849)
(MGI:6209107|PMID:30135424), (MGI:6271678|PMID:30193849)
UniProt PMID:30135424 PMID:30193849 MGI:6209107 MGI:6271678 NCBI chr20:504,967...508,354 JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:45,585,137...45,616,769
Ensembl chr20:46,642,081...46,681,289
JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chr11:10,437,712...10,440,053
Ensembl chr11:10,165,418...10,167,842
JBrowse link
G ANG angiogenin involved_in ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
UniProt PMID:12548285 MGI:2652649 NCBI chr14:1,548,693...1,558,528
Ensembl chr14:19,614,950...19,615,393
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G BPI bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr20:34,633,243...34,661,171
Ensembl chr20:35,739,700...35,771,910
JBrowse link
G BPIFA1 BPI fold containing family A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:29,524,619...29,532,996
Ensembl chr20:30,642,191...30,649,515
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G CTSG cathepsin G involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:5,342,517...5,345,218
Ensembl chr14:23,466,265...23,468,960
JBrowse link
G DCD dermcidin involved_in ISO (PMID:11694882) ComplexPortal PMID:11694882 NCBI chr12:34,099,063...34,102,968
Ensembl chr12:34,826,958...34,830,859
JBrowse link
G DEFA4 defensin alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:344,350...346,835
Ensembl chr 8:6,938,152...6,940,669
JBrowse link
G DEFB1 defensin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:403,268...410,712
Ensembl chr 8:6,874,235...6,881,631
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,482,981...60,484,585
Ensembl chr11:63,821,447...63,822,579
JBrowse link
G JCHAIN joining chain of multimeric IgA and IgM involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:53,554,643...53,565,693
Ensembl chr 4:59,901,109...59,914,576
JBrowse link
G LOC100970092 small proline-rich protein 2D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,398,152...128,399,563
Ensembl chr 1:132,026,769...132,026,987
JBrowse link
G LOC100977055 patr class I histocompatibility antigen, alpha chain E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,233,293...30,238,056
Ensembl chr 6:31,101,251...31,107,262
JBrowse link
G LOC100979846 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,034,782...26,036,003
Ensembl chr 6:26,695,177...26,695,557
JBrowse link
G LOC100980586 60S ribosomal protein L39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,200,017...71,200,380 JBrowse link
G LOC100981154 histone H2B type 1-K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,971,577...26,980,171
Ensembl chr 6:27,641,404...27,641,784
JBrowse link
G LOC100981494 histone H2B type 1-J involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,958,944...26,966,117
Ensembl chr 6:27,627,323...27,627,703
JBrowse link
G LOC100981885 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,017,776...26,019,904
Ensembl chr 6:26,679,372...26,679,752
JBrowse link
G LOC100985433 histone H2B type 2-E involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:125,228,579...125,230,881
Ensembl chr 1:128,886,807...128,887,187
JBrowse link
G LOC100985450 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,051,127...26,051,730
Ensembl chr 6:26,616,435...26,616,815
JBrowse link
G LOC100985830 semenogelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,537,773...41,539,964
Ensembl chr20:42,628,856...42,631,405
JBrowse link
G LOC100986165 semenogelin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,552,614...41,554,605
Ensembl chr20:42,642,620...42,644,611
JBrowse link
G LOC100989841 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:25,948,480...25,959,296
Ensembl chr 6:26,616,435...26,616,815
JBrowse link
G LTF lactotransferrin involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G NPY neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657
JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,896,729...117,900,946
Ensembl chr12:121,270,082...121,275,740
JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:18,998,060...19,094,507
Ensembl chr22:36,849,794...36,919,509
Ensembl chr22:36,849,794...36,919,509
JBrowse link
G RNASE6 ribonuclease A family member k6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,642,819...1,644,582
Ensembl chr14:19,700,536...19,700,988
JBrowse link
G RNASE7 ribonuclease A family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,857,213...1,858,781
Ensembl chr14:19,939,884...19,940,354
JBrowse link
G RPL39 ribosomal protein L39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,818,773...108,823,935 JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,583,429...41,585,773
Ensembl chr20:42,673,417...42,675,773
JBrowse link
G SPRR2B small proline rich protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,412,256...128,413,641
Ensembl chr 1:132,040,869...132,041,087
JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:89,675,834...89,684,391
Ensembl chr 7:103,257,501...103,266,389
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 6:150,564,545...150,573,582
Ensembl chr 6:155,254,652...155,263,730
JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DEFB136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chr 8:7,224,285...7,226,508 JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chr19:7,699,828...7,726,094
Ensembl chr19:8,554,242...8,573,672
JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGALS4 galectin 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6507238|PMID:27427436) MGI
Ensembl
PMID:27427436 GO_REF:0000107 MGI:6507238 NCBI chr19:35,895,621...35,907,529
Ensembl chr19:44,466,000...44,477,014
JBrowse link
G MMP7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:4838964|PMID:20056603) MGI PMID:20056603 MGI:4838964 NCBI chr11:97,467,037...97,477,305
Ensembl chr11:100,960,032...100,971,099
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:3698376|PMID:11248802) MGI PMID:11248802 MGI:3698376 NCBI chr11:97,467,037...97,477,305
Ensembl chr11:100,960,032...100,971,099
JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin NOT|involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chr11:10,437,712...10,440,053
Ensembl chr11:10,165,418...10,167,842
JBrowse link
G ANG angiogenin involved_in ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
UniProt PMID:12548285 MGI:2652649 NCBI chr14:1,548,693...1,558,528
Ensembl chr14:19,614,950...19,615,393
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in ISO (PMID:14978112), (PMID:20209079) UniProt PMID:14978112 PMID:20209079 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G DEFA4 defensin alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:344,350...346,835
Ensembl chr 8:6,938,152...6,940,669
JBrowse link
G FAM3A FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chr  X:143,947,867...143,957,966
Ensembl chr  X:153,817,983...153,828,152
JBrowse link
G LOC100991978 interleukin-36 receptor antagonist protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,059,526...89,065,695
Ensembl chr2A:114,004,209...114,009,865
JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G NPY neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657
JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:141,953,600...141,956,991
Ensembl chr 7:154,106,275...154,109,635
JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 7:89,675,834...89,684,391
Ensembl chr 7:103,257,501...103,266,389
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 6:150,564,545...150,573,582
Ensembl chr 6:155,254,652...155,263,730
JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL10 BCL10 immune signaling adaptor involved_in ISO (MGI:5310700|PMID:22265677) UniProt PMID:22265677 MGI:5310700 NCBI chr 1:117,823,388...117,834,314 JBrowse link
G CARD9 caspase recruitment domain family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,432,709...107,446,271
Ensembl chr 9:136,416,279...136,424,756
JBrowse link
G CLEC4D C-type lectin domain family 4 member D involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,599,654...8,608,494
Ensembl chr12:8,814,680...8,823,484
JBrowse link
G CLEC4E C-type lectin domain family 4 member E involved_in ISO (MGI:3796003|PMID:18490740) UniProt PMID:18490740 MGI:3796003 NCBI chr12:8,620,618...8,627,610 JBrowse link
G CLEC6A C-type lectin domain containing 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:8,537,766...8,560,736
Ensembl chr12:8,752,778...8,775,738
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219
JBrowse link
G DEFB106A defensin beta 106A involved_in ISO (PMID:24189797) UniProt PMID:24189797 NCBI chr 8:11,129,250...11,132,957 JBrowse link
G DEFB114 defensin beta 114 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,527,541...49,531,451
Ensembl chr 6:50,787,203...50,791,015
JBrowse link
G DEFB119 defensin beta 119 involved_in ISO (PMID:24449502) UniProt PMID:24449502 NCBI chr20:27,669,767...27,685,985
Ensembl chr20:28,305,065...28,321,661
JBrowse link
G DEFB136 defensin beta 136 involved_in ISO (PMID:34481960) UniProt PMID:34481960 NCBI chr 8:7,224,285...7,226,508 JBrowse link
G DEFB4A defensin beta 4A involved_in ISO (PMID:30050988) UniProt PMID:30050988 NCBI chr 8:11,061,642...11,063,857 JBrowse link
G LOC100986019 ribonuclease 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,872,595...1,873,331
Ensembl chr14:19,954,680...19,955,147
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:62,383,270...62,561,579
Ensembl chr16:81,812,565...81,984,064
JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:141,953,600...141,956,991
Ensembl chr 7:154,106,275...154,109,635
JBrowse link
antimicrobial humoral immune response mediated by antimicrobial peptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADM adrenomedullin involved_in ISO (PMID:10225288) UniProt PMID:10225288 NCBI chr11:10,437,712...10,440,053
Ensembl chr11:10,165,418...10,167,842
JBrowse link
G ANG angiogenin involved_in ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
UniProt PMID:12548285 MGI:2652649 NCBI chr14:1,548,693...1,558,528
Ensembl chr14:19,614,950...19,615,393
JBrowse link
G APP amyloid beta precursor protein involved_in ISO (PMID:20209079) UniProt PMID:20209079 RGD:10400853 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G BPI bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr20:34,633,243...34,661,171
Ensembl chr20:35,739,700...35,771,910
JBrowse link
G BPIFA1 BPI fold containing family A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:29,524,619...29,532,996
Ensembl chr20:30,642,191...30,649,515
JBrowse link
G CALCA calcitonin related polypeptide alpha involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr11:15,055,897...15,061,539
Ensembl chr11:14,745,588...14,751,267
JBrowse link
G CAMP cathelicidin antimicrobial peptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr17:22,425,022...22,430,243
Ensembl chr17:22,719,425...22,722,341
JBrowse link
G CCL11 C-C motif chemokine ligand 11 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr17:22,495,737...22,515,144
Ensembl chr17:22,806,076...22,808,345
Ensembl chr17:22,806,076...22,808,345
JBrowse link
G CCL13 C-C motif chemokine ligand 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,430,633...22,432,893
Ensembl chr17:22,723,888...22,726,381
JBrowse link
G CCL17 C-C motif chemokine ligand 17 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr16:37,678,518...37,689,350
Ensembl chr16:56,819,949...56,822,131
JBrowse link
G CCL18 C-C motif chemokine ligand 18 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr17:20,723,413...20,730,633
Ensembl chr17:21,019,868...21,027,070
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 9:34,525,820...34,527,628
Ensembl chr 9:35,334,353...35,336,108
JBrowse link
G CCL20 C-C motif chemokine ligand 20 involved_in ISO (PMID:12949249), (PMID:19109182) UniProt PMID:12949249 PMID:19109182 NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225
JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 9:34,545,248...34,546,801
Ensembl chr 9:35,353,768...35,354,924
JBrowse link
G CCL22 C-C motif chemokine ligand 22 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr16:37,631,861...37,640,208
Ensembl chr16:56,765,367...56,771,213
JBrowse link
G CCL25 C-C motif chemokine ligand 25 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr19:7,307,109...7,363,983
Ensembl chr19:8,208,273...8,217,780
JBrowse link
G CCL27 C-C motif chemokine ligand 27 involved_in ISO (PMID:19109182) UniProt PMID:19109182 NCBI chr 9:34,498,478...34,501,475
Ensembl chr 9:35,307,175...35,308,146
JBrowse link
G CCL28 C-C motif chemokine ligand 28 involved_in ISO (PMID:12538707)
(MGI:5897759|PMID:12538707)
UniProt PMID:12538707 MGI:5897759 NCBI chr 5:66,977,643...66,998,420
Ensembl chr 5:72,012,579...72,046,031
JBrowse link
G CCL8 C-C motif chemokine ligand 8 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr17:22,468,080...22,470,443
Ensembl chr17:22,761,064...22,763,933
JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 4:50,325,248...50,327,165
Ensembl chr 4:56,153,899...56,159,474
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
JBrowse link
G CXCL11 C-X-C motif chemokine ligand 11 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 4:48,169,954...48,172,455
Ensembl chr 4:54,007,818...54,010,336
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231
JBrowse link
G CXCL13 C-X-C motif chemokine ligand 13 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 4:46,583,759...46,589,865
Ensembl chr 4:52,428,702...52,434,803
JBrowse link
G CXCL14 C-X-C motif chemokine ligand 14 involved_in ISO (PMID:12949249), (PMID:19109182)
(MGI:3822386|PMID:19109182)
UniProt PMID:12949249 PMID:19109182 MGI:3822386 NCBI chr 5:130,960,143...130,967,365
Ensembl chr 5:137,100,019...137,108,336
JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 4:50,092,989...50,095,541
Ensembl chr 4:55,925,562...55,986,555
JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,357,643...50,359,822
Ensembl chr 4:56,189,961...56,192,402
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:19109182) UniProt PMID:19109182 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
JBrowse link
G CXCL9 C-X-C motif chemokine ligand 9 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 4:48,198,478...48,204,658
Ensembl chr 4:54,036,342...54,042,502
JBrowse link
G DCD dermcidin involved_in ISO (PMID:11694882) UniProt PMID:11694882 NCBI chr12:34,099,063...34,102,968
Ensembl chr12:34,826,958...34,830,859
JBrowse link
G DEFA4 defensin alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:344,350...346,835
Ensembl chr 8:6,938,152...6,940,669
JBrowse link
G DEFB1 defensin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:403,268...410,712
Ensembl chr 8:6,874,235...6,881,631
JBrowse link
G DEFB103A defensin beta 103A involved_in ISO (PMID:11085990) UniProt PMID:11085990 NCBI chr 8:11,075,686...11,077,616 JBrowse link
G DEFB118 defensin beta 118 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:27,659,911...27,666,555
Ensembl chr20:28,296,644...28,301,392
JBrowse link
G DEFB126 defensin beta 126 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:367,017...370,168
Ensembl chr20:142,829...146,213
JBrowse link
G DEFB4A defensin beta 4A involved_in ISO (PMID:19109182)
(PMID:19109182), (PMID:30050988)
(PMID:9727055)
UniProt PMID:9727055 PMID:19109182 PMID:30050988 NCBI chr 8:11,061,642...11,063,857 JBrowse link
G DMBT1 deleted in malignant brain tumors 1 involved_in ISO (PMID:11007786)
(PMID:19189310)
UniProt PMID:11007786 PMID:19189310 NCBI chr10:119,129,440...119,200,232
Ensembl chr10:122,540,855...123,474,497
JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G FAM3A FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chr  X:143,947,867...143,957,966
Ensembl chr  X:153,817,983...153,828,152
JBrowse link
G FAU FAU ubiquitin like and ribosomal protein S30 fusion involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,482,981...60,484,585
Ensembl chr11:63,821,447...63,822,579
JBrowse link
G GALP galanin like peptide involved_in ISO (PMID:23537644) UniProt PMID:23537644 NCBI chr19:53,201,889...53,212,832
Ensembl chr19:61,996,543...62,007,333
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G GNLY granulysin involved_in ISO (PMID:9756476) UniProt PMID:9756476 NCBI chr2A:85,743,909...85,748,632
Ensembl chr2A:87,293,337...87,297,805
JBrowse link
G HAMP hepcidin antimicrobial peptide involved_in ISO (PMID:11034317), (PMID:11113131) UniProt PMID:11034317 PMID:11113131 NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861
JBrowse link
G HMGN2 high mobility group nucleosomal binding domain 2 involved_in ISO (PMID:16204630) UniProt PMID:16204630 NCBI chr 1:25,736,429...25,739,987
Ensembl chr 1:26,801,607...26,804,333
JBrowse link
G HRG histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:183,701,069...183,712,365
Ensembl chr 3:192,168,299...192,180,539
JBrowse link
G HTN1 histatin 1 involved_in ISO (PMID:3286634) UniProt PMID:3286634 NCBI chr 4:54,174,923...54,183,320
Ensembl chr 4:60,511,983...60,520,436
JBrowse link
G HTN3 histatin 3 involved_in ISO (PMID:12711380), (PMID:3286634) UniProt PMID:3286634 PMID:12711380 NCBI chr 4:54,197,275...54,205,341
Ensembl chr 4:60,534,580...60,542,706
JBrowse link
G KNG1 kininogen 1 involved_in ISO (PMID:12074933) UniProt PMID:12074933 NCBI chr 3:183,751,598...183,778,655
Ensembl chr 3:192,219,462...192,245,149
JBrowse link
G KRT6A keratin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,270,961...36,277,035
Ensembl chr12:37,048,390...37,054,607
JBrowse link
G LEAP2 liver enriched antimicrobial peptide 2 involved_in ISO (PMID:12493837) UniProt PMID:12493837 NCBI chr 5:128,288,444...128,292,011
Ensembl chr 5:134,448,183...134,452,147
JBrowse link
G LGALS3 galectin 3 involved_in ISO (PMID:16982911) UniProt PMID:16982911 NCBI chr14:35,715,850...35,732,263
Ensembl chr14:53,990,023...54,006,412
JBrowse link
G LOC100978606 beta-defensin 127 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:381,899...383,717
Ensembl chr20:158,264...159,961
JBrowse link
G LOC100979846 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,034,782...26,036,003
Ensembl chr 6:26,695,177...26,695,557
JBrowse link
G LOC100980586 60S ribosomal protein L39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,200,017...71,200,380 JBrowse link
G LOC100981154 histone H2B type 1-K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,971,577...26,980,171
Ensembl chr 6:27,641,404...27,641,784
JBrowse link
G LOC100981494 histone H2B type 1-J involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:26,958,944...26,966,117
Ensembl chr 6:27,627,323...27,627,703
JBrowse link
G LOC100981885 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,017,776...26,019,904
Ensembl chr 6:26,679,372...26,679,752
JBrowse link
G LOC100985433 histone H2B type 2-E involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 1:125,228,579...125,230,881
Ensembl chr 1:128,886,807...128,887,187
JBrowse link
G LOC100985450 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:26,051,127...26,051,730
Ensembl chr 6:26,616,435...26,616,815
JBrowse link
G LOC100985830 semenogelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,537,773...41,539,964
Ensembl chr20:42,628,856...42,631,405
JBrowse link
G LOC100989841 histone H2B type 1-C/E/F/G/I involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chr 6:25,948,480...25,959,296
Ensembl chr 6:26,616,435...26,616,815
JBrowse link
G LOC100991118 defensin-5 involved_in ISO (PMID:12660734), (PMID:25782105) UniProt PMID:12660734 PMID:25782105 NCBI chr 8:264,298...265,962 JBrowse link
G LOC100991849 glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:5,279,765...5,281,053
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G LOC100992193 protein S100-A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,812,685...128,813,961
Ensembl chr 1:132,436,200...132,444,820
JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G MUC7 mucin 7, secreted involved_in ISO (PMID:12543672) UniProt PMID:12543672 NCBI chr 4:53,741,379...53,750,277 JBrowse link
G NPPB natriuretic peptide B involved_in ISO (PMID:11410403) UniProt PMID:11410403 NCBI chr 1:10,621,416...10,622,960
Ensembl chr 1:11,838,518...11,839,995
JBrowse link
G NPY neuropeptide Y involved_in ISO (PMID:18603306)
(PMID:9756788)
UniProt PMID:9756788 PMID:18603306 NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657
JBrowse link
G NTS neurotensin involved_in ISO (PMID:12074933) UniProt PMID:12074933 NCBI chr12:83,402,313...83,410,356
Ensembl chr12:86,640,720...86,648,745
JBrowse link
G PF4 platelet factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,208,806...50,210,570
Ensembl chr 4:56,041,833...56,043,750
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:43,033,080...43,037,726
Ensembl chr19:51,569,275...51,573,764
JBrowse link
G PGLYRP3 peptidoglycan recognition protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,642,034...128,656,082
Ensembl chr 1:132,270,957...132,283,860
JBrowse link
G PGLYRP4 peptidoglycan recognition protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,681,726...128,700,275
Ensembl chr 1:132,310,256...132,329,013
JBrowse link
G PLA2G1B phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,896,729...117,900,946
Ensembl chr12:121,270,082...121,275,740
JBrowse link
G POMC proopiomelanocortin involved_in ISO (PMID:10670585) UniProt PMID:10670585 NCBI chr2A:25,161,668...25,165,600
Ensembl chr2A:25,258,768...25,262,706
JBrowse link
G PPBP pro-platelet basic protein involved_in ISO (PMID:10877842) UniProt PMID:10877842 NCBI chr 4:50,203,168...50,204,303
Ensembl chr 4:56,035,060...56,037,702
JBrowse link
G REG3G regenerating family member 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:79,116,083...79,118,886
Ensembl chr2A:80,680,615...80,683,748
JBrowse link
G RNASE6 ribonuclease A family member k6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,642,819...1,644,582
Ensembl chr14:19,700,536...19,700,988
JBrowse link
G RNASE7 ribonuclease A family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,857,213...1,858,781
Ensembl chr14:19,939,884...19,940,354
JBrowse link
G ROMO1 reactive oxygen species modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,026,660...32,028,314
Ensembl chr20:33,148,002...33,149,345
JBrowse link
G RPL30 ribosomal protein L30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:94,678,823...94,682,726
Ensembl chr 8:96,863,944...96,867,526
JBrowse link
G RPL39 ribosomal protein L39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,818,773...108,823,935 JBrowse link
G RPS19 ribosomal protein S19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,748,604...38,760,055
Ensembl chr19:47,254,157...47,264,953
JBrowse link
G S100A12 S100 calcium binding protein A12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,725,102...128,727,021
Ensembl chr 1:132,354,132...132,356,085
JBrowse link
G S100A9 S100 calcium binding protein A9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:128,709,175...128,712,461
Ensembl chr 1:132,338,246...132,341,497
JBrowse link
G SPAG11A sperm associated antigen 11A involved_in ISO (PMID:16411022) UniProt PMID:16411022 NCBI chr 8:11,094,358...11,110,481 JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:12074933), (PMID:18603306)
(PMID:18603306)
UniProt PMID:12074933 PMID:18603306 NCBI chr 7:89,675,834...89,684,391
Ensembl chr 7:103,257,501...103,266,389
JBrowse link
G TSLP thymic stromal lymphopoietin involved_in ISO (PMID:24850429) UniProt PMID:24850429 NCBI chr 5:106,440,136...106,446,849
Ensembl chr 5:112,242,490...112,250,130
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chr 6:150,564,545...150,573,582
Ensembl chr 6:155,254,652...155,263,730
JBrowse link
G XCL1 X-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) UniProt PMID:12949249 NCBI chr 1:143,837,578...144,068,261
Ensembl chr 1:147,785,654...147,790,587
JBrowse link
antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZU1 azurocidin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:300,318...304,730
Ensembl chr19:797,038...800,691
JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85481|PMID:9009202) MGI
Ensembl
PMID:9009202 GO_REF:0000107 MGI:85481 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005
JBrowse link
G COLEC11 collectin subfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:3,610,679...3,659,739
Ensembl chr2A:3,529,358...3,579,517
JBrowse link
G CST9 cystatin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:23,551,908...23,555,353
Ensembl chr20:23,904,682...23,908,233
JBrowse link
G DEFA4 defensin alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:344,350...346,835
Ensembl chr 8:6,938,152...6,940,669
JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP1 A-kinase anchoring protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,162,993...51,199,202
Ensembl chr17:56,023,381...56,058,744
JBrowse link
G CLPB caseinolytic mitochondrial matrix peptidase chaperone subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,364,012...67,514,035
Ensembl chr11:70,594,633...70,736,699
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
JBrowse link
G DDX58 DExD/H-box helicase 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,230,012...32,302,159
Ensembl chr 9:33,040,000...33,110,557
JBrowse link
G DHX15 DEAH-box helicase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:18,931,119...18,988,048
Ensembl chr 4:24,217,123...24,273,585
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579
JBrowse link
G LOC100969375 caspase recruitment domain-containing protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:45,204,735...45,256,481
Ensembl chr19:53,798,967...53,850,328
JBrowse link
G MARCHF2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chr19:7,699,828...7,726,094
Ensembl chr19:8,554,242...8,573,672
JBrowse link
G MBL2 mannose binding lectin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019
JBrowse link
G NLRP1 NLR family pyrin domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,562,129...5,667,765
Ensembl chr17:5,542,007...5,623,091
JBrowse link
G NLRP6 NLR family pyrin domain containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:274,904...281,590
Ensembl chr11:319,082...325,888
JBrowse link
G NMB neuromedin B involved_in ISO (MGI:6435299|PMID:31601264) UniProt PMID:31601264 MGI:6435299 NCBI chr15:63,322,869...63,326,989 JBrowse link
G NMBR neuromedin B receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:139,842,329...139,915,173
Ensembl chr 6:143,917,130...143,930,363
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,511,984...110,525,343
Ensembl chr12:113,896,760...113,921,814
JBrowse link
G PHB1 prohibitin 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790
JBrowse link
G PHB2 prohibitin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,097,073...7,102,474
Ensembl chr12:7,013,195...7,018,053
JBrowse link
G RNF135 ring finger protein 135 involved_in ISO (PMID:28469175), (PMID:31006531)
(MGI:6152590|PMID:21147464), (MGI:6155526|PMID:23950712)
UniProt PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 MGI:6152590 MGI:6155526 NCBI chr17:25,843,447...25,869,874 JBrowse link
G SENP7 SUMO specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,422,018...98,623,832
Ensembl chr 3:105,103,473...105,283,838
JBrowse link
G ZDHHC1 zinc finger DHHC-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,739,857...47,761,887
Ensembl chr16:67,129,091...67,142,001
JBrowse link
G ZDHHC11 zinc finger DHHC-type containing 11 involved_in ISO (PMID:29429998) UniProt PMID:29429998 NCBI chr 5:877,245...1,136,567 JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chr19:276,499...280,598 JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of
involved_in
ISO
IEA
(MGI:3528786|PMID:15692051) MGI
Ensembl
PMID:15692051 GO_REF:0000107 MGI:3528786 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC7A C-type lectin domain containing 7A acts_upstream_of_or_within ISO (MGI:3042099|PMID:12719478) MGI PMID:12719478 MGI:3042099 NCBI chr12:10,161,780...10,174,943
Ensembl chr12:10,410,384...10,425,452
JBrowse link
G FCN1 ficolin 1 involved_in ISO (PMID:21037097) UniProt PMID:21037097 NCBI chr 9:106,039,315...106,047,648
Ensembl chr 9:135,040,310...135,049,111
JBrowse link
G FFAR2 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,394,401...32,398,730
Ensembl chr19:41,132,599...41,133,591
JBrowse link
G MASP1 MBL associated serine protease 1 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chr 3:184,241,611...184,317,272
Ensembl chr 3:192,707,784...192,782,196
JBrowse link
G MASP2 MBL associated serine protease 2 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chr 1:9,787,565...9,810,276
Ensembl chr 1:11,009,760...11,030,734
JBrowse link
G MBL2 mannose binding lectin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3042099|PMID:12719478) MGI PMID:12719478 MGI:3042099 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3528769|PMID:15690042) Ensembl
MGI
PMID:15690042 GO_REF:0000107 MGI:3528769 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865
JBrowse link
G TIRAP TIR domain containing adaptor protein acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chr11:121,100,558...121,112,844
Ensembl chr11:125,018,064...125,022,309
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
JBrowse link
G CD36 CD36 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(PMID:19931471) MGI
Ensembl
UniProt
PMID:19931471 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TLR6 toll like receptor 6 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
UniProt
MGI
PMID:16880211 PMID:19931471 NCBI chr 4:33,153,151...33,174,053
Ensembl chr 4:39,009,103...39,011,490
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238
JBrowse link
G CDA cytidine deaminase ISO K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 1:19,538,696...19,568,008
Ensembl chr 1:20,583,441...20,612,711
JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chr13:58,166,872...58,176,146
Ensembl chr13:77,211,430...77,222,201
JBrowse link
G ACTG1 actin gamma 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:75,965,911...75,968,822
Ensembl chr17:81,668,221...81,671,087
JBrowse link
G ACTR2 actin related protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr2A:65,289,675...65,333,219 JBrowse link
G ACTR3 actin related protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr2B:827,184...900,424
Ensembl chr2B:114,373,392...114,445,729
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chr 9:104,541,051...104,582,574
Ensembl chr 9:133,156,761...133,193,707
JBrowse link
G AIF1 allograft inflammatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125
JBrowse link
G AQP4 aquaporin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:20,108,607...20,122,381
Ensembl chr18:23,713,146...23,726,919
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
JBrowse link
G ASL argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr 7:59,971,529...59,988,722
Ensembl chr 7:73,142,842...73,157,472
JBrowse link
G ASS1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G CAPG capping actin protein, gelsolin like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr2A:85,447,296...85,466,677
Ensembl chr2A:86,997,891...87,016,263
JBrowse link
G CASP1 caspase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:99,965,964...99,975,640
Ensembl chr11:103,448,497...103,458,149
Ensembl chr11:103,448,497...103,458,149
JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISO
IEA
RGD
Ensembl
PMID:14512159 GO_REF:0000107 RGD:8548859 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) UniProt PMID:9407497 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G CD47 CD47 molecule involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr 3:105,170,246...105,217,603
Ensembl chr 3:112,104,037...112,143,522
JBrowse link
G CD58 CD58 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,992,828...86,049,066
Ensembl chr 1:121,045,460...121,101,636
JBrowse link
G CDC42 cell division cycle 42 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G CDC42EP2 CDC42 effector protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr11:60,679,582...60,686,763
Ensembl chr11:64,024,281...64,024,913
JBrowse link
G CDC42EP4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:67,212,571...67,239,844 JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CIITA class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chr16:9,819,440...9,885,379
Ensembl chr16:11,041,434...11,090,485
JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chr 3:187,328,629...187,345,360
Ensembl chr 3:195,882,239...195,899,248
JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:58,628,872...58,836,205
Ensembl chr 9:86,681,953...86,887,958
JBrowse link
G DAPK3 death associated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,984,806...2,996,782
Ensembl chr19:3,934,496...3,946,011
JBrowse link
G DAXX death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chr 6:32,890,846...32,895,307
Ensembl chr 6:34,004,543...34,008,717
JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5466658|PMID:23071094) MGI
Ensembl
PMID:23071094 GO_REF:0000107 MGI:5466658 NCBI chr 1:195,537,319...195,618,257
Ensembl chr 1:200,575,259...200,656,197
JBrowse link
G EVL Enah/Vasp-like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr14:80,594,889...80,767,652
Ensembl chr14:100,005,645...100,084,598
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FASLG Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chr 1:148,159,826...148,167,785
Ensembl chr 1:151,868,430...151,876,281
JBrowse link
G FCAR Fc fragment of IgA receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr19:51,919,345...51,935,340
Ensembl chr19:60,614,405...60,630,480
JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 3:57,943,263...58,107,115
Ensembl chr 3:59,359,234...59,521,989
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G GBP2 guanylate binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 1:91,816,602...91,836,594
Ensembl chr 1:90,569,151...90,588,158
JBrowse link
G GBP4 guanylate binding protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 1:91,892,368...91,910,048
Ensembl chr 1:90,590,242...90,660,565
JBrowse link
G GBP5 guanylate binding protein 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 1:91,969,699...92,006,127
Ensembl chr 1:90,720,927...90,729,757
JBrowse link
G GBP6 guanylate binding protein family member 6 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) MGI PMID:18025219 MGI:4412460 NCBI chr 1:92,040,822...92,063,571
Ensembl chr 1:90,791,487...90,817,250
JBrowse link
G GBP7 guanylate binding protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 1:91,841,867...91,886,638
Ensembl chr 1:90,590,242...90,660,565
JBrowse link
G GSN gelsolin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
JBrowse link
G IL12B interleukin 12B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 5:154,706,467...154,722,231
Ensembl chr 5:161,325,303...161,335,381
JBrowse link
G IL12RB1 interleukin 12 receptor subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:17,536,709...17,547,665
Ensembl chr19:18,513,585...18,541,383
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:66,568,370...66,591,949
Ensembl chr16:85,905,334...85,929,073
JBrowse link
G IRGM immunity related GTPase M acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 5:146,274,097...146,329,979
Ensembl chr 5:152,278,581...152,308,182
JBrowse link
G KIF16B kinesin family member 16B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr20:16,229,429...16,532,735
Ensembl chr20:16,210,821...16,512,618
JBrowse link
G KIF5B kinesin family member 5B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr10:32,138,964...32,186,448
Ensembl chr10:32,731,150...32,778,242
JBrowse link
G LGALS9 galectin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959
JBrowse link
G LOC100972641 HLA class II histocompatibility antigen, DQ beta 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,328,807...32,336,211
Ensembl chr 6:33,444,552...33,451,976
JBrowse link
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in ISO (MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803) BHF-UCL PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chr 6:32,237,395...32,244,201
Ensembl chr 6:33,353,599...33,360,272
JBrowse link
G LOC100991849 glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:5,279,765...5,281,053
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G LOC100995577 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,637,826...32,646,501
Ensembl chr 6:33,752,638...33,761,417
JBrowse link
G MRC1 mannose receptor C-type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486412|PMID:22832163) MGI
Ensembl
PMID:22832163 GO_REF:0000107 MGI:5486412 NCBI chr10:18,128,280...18,230,438
Ensembl chr10:18,398,310...18,500,367
JBrowse link
G MST1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chr 3:49,616,339...49,621,749 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G MYO18A myosin XVIIIA acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr17:27,593,787...27,700,801
Ensembl chr17:28,116,279...28,208,301
JBrowse link
G MYO1C myosin IC acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:1,446,506...1,475,634
Ensembl chr17:1,345,143...1,375,540
JBrowse link
G NOS2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219) MGI
Ensembl
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chr17:58,417,134...58,526,409
Ensembl chr17:63,511,784...63,579,067
JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr2A:73,126,262...73,165,892
Ensembl chr2A:74,620,821...74,657,419
JBrowse link
G RAB12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr18:5,646,023...5,675,920
Ensembl chr18:7,972,938...8,027,500
JBrowse link
G RAB20 RAB20, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr13:91,660,142...91,698,215
Ensembl chr13:110,778,119...110,815,408
JBrowse link
G RAB43 RAB43, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 3:126,145,723...126,179,989
Ensembl chr 3:133,504,093...133,538,331
JBrowse link
G RAB7B RAB7B, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:181,584,814...181,611,831
Ensembl chr 1:185,867,145...185,894,691
JBrowse link
G RPL13A ribosomal protein L13a involved_in ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)
UniProt PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr19:46,485,729...46,504,928
Ensembl chr19:55,423,866...55,428,598
JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:53,958,807...54,014,752
Ensembl chr17:58,799,069...58,853,653
JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr20:2,006,994...2,052,894
Ensembl chr20:1,773,271...1,818,106
JBrowse link
G SLC26A6 solute carrier family 26 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:48,547,277...48,557,099
Ensembl chr 3:49,629,237...49,639,039
JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chr16:10,196,432...10,198,205 JBrowse link
G SOCS3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chr17:72,433,206...72,436,500
Ensembl chr17:77,983,389...77,984,066
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544
JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:78,270,642...78,316,074
Ensembl chr2B:196,186,906...196,232,280
JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 6:141,924,656...141,974,579
Ensembl chr 6:146,688,670...146,689,533
JBrowse link
G STX4 syntaxin 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr16:23,917,576...23,933,884
Ensembl chr16:31,400,915...31,411,364
JBrowse link
G STX8 syntaxin 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:42,076,600...42,403,334
Ensembl chr17:46,816,859...47,141,816
JBrowse link
G STXBP1 syntaxin binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 9:98,731,527...98,811,608
Ensembl chr 9:127,434,080...127,486,152
JBrowse link
G STXBP2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr19:6,926,833...6,937,385
Ensembl chr19:7,781,830...7,792,038
JBrowse link
G STXBP3 syntaxin binding protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:111,120,487...111,185,669
Ensembl chr 1:110,287,374...110,351,616
JBrowse link
G STXBP4 syntaxin binding protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:49,058,071...49,253,448
Ensembl chr17:53,923,387...54,118,415
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chr 6:83,491,803...83,527,256 JBrowse link
G TDGF1 teratocarcinoma-derived growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,473,282...46,478,454
Ensembl chr 3:47,577,949...47,583,126
JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TLR3 toll like receptor 3 NOT ISO intestinal epithelial cells
thyrocytes
RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chr 4:178,238,352...178,256,264
Ensembl chr 4:190,446,487...190,462,728
JBrowse link
G TLR4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:16525716 RGD:14985246 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G VAMP3 vesicle associated membrane protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 1:6,534,115...6,544,275 JBrowse link
G VAMP4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr 1:147,192,001...147,233,945
Ensembl chr 1:150,903,134...150,944,815
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) MGI PMID:19144319 MGI:3828867 NCBI chr2A:85,627,678...85,632,205
Ensembl chr2A:87,180,681...87,185,195
JBrowse link
G VIM vimentin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
JBrowse link
G VPS26B VPS26, retromer complex component B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr11:129,077,964...129,100,936
Ensembl chr11:132,936,077...132,958,364
JBrowse link
G WAS WASP actin nucleation promoting factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr  X:40,982,132...40,989,767
Ensembl chr  X:48,842,765...48,850,380
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
G ZYX zyxin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828867|PMID:19144319) MGI
Ensembl
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 7:135,375,816...135,385,871
Ensembl chr 7:147,865,440...147,875,017
JBrowse link
cellular response to lectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:2200903 RGD:10059628 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:62,383,270...62,561,579
Ensembl chr16:81,812,565...81,984,064
JBrowse link
G SYK spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238
JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chr10:96,385,534...96,458,571
Ensembl chr10:99,889,160...99,947,270
JBrowse link
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:82358|PMID:8806812) MGI
Ensembl
PMID:8806812 GO_REF:0000107 MGI:82358 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941
JBrowse link
G ACOD1 aconitate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,166,872...58,176,146
Ensembl chr13:77,211,430...77,222,201
JBrowse link
G ADAM9 ADAM metallopeptidase domain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,298,194...38,406,706
Ensembl chr 8:35,473,278...35,581,192
JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chr 9:104,541,051...104,582,574
Ensembl chr 9:133,156,761...133,193,707
JBrowse link
G AICDA activation induced cytidine deaminase acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917
JBrowse link
G AKAP8 A-kinase anchoring protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,888,201...14,912,739
Ensembl chr19:15,872,536...15,897,661
JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:87,652,254...87,661,173
Ensembl chr10:91,180,034...91,188,165
JBrowse link
G ARG1 arginase 1 ISO RGD PMID:9013624 RGD:4144055 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
JBrowse link
G ARID5A AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) UniProt PMID:27671645 MGI:5887181 NCBI chr2A:102,762,076...102,778,072
Ensembl chr2A:97,459,690...97,475,651
JBrowse link
G ASS1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G B2M beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chr15:23,668,108...23,674,791
Ensembl chr15:41,836,345...41,842,991
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chr 1:117,823,388...117,834,314 JBrowse link
G BCR BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (MGI:71493|PMID:7889565) MGI PMID:7889565 MGI:71493
G BPI bactericidal permeability increasing protein involved_in ISO (PMID:1937776) UniProt PMID:1937776 NCBI chr20:34,633,243...34,661,171
Ensembl chr20:35,739,700...35,771,910
JBrowse link
G BYSL bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chr 6:41,504,652...41,516,541
Ensembl chr 6:42,806,531...42,821,518
JBrowse link
G CACTIN cactin, spliceosome C complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,636,129...2,652,332
Ensembl chr19:3,586,983...3,601,990
JBrowse link
G CAMP cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G CAPN2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chr 1:199,335,582...199,399,267
Ensembl chr 1:204,335,573...204,409,150
JBrowse link
G CARD16 caspase recruitment domain family member 16 involved_in ISO (PMID:15383541) UniProt PMID:15383541 NCBI chr11:99,981,854...99,985,839 JBrowse link
G CASP1 caspase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:99,965,964...99,975,640
Ensembl chr11:103,448,497...103,458,149
Ensembl chr11:103,448,497...103,458,149
JBrowse link
G CCL2 C-C motif chemokine ligand 2 involved_in ISO (MGI:3699670|PMID:14662900) RGD
BHF-UCL
PMID:8921263 PMID:14662900 MGI:3699670 RGD:8549522 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G CCR5 C-C motif chemokine receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,273,096...46,278,471
Ensembl chr 3:47,380,321...47,381,379
JBrowse link
G CD14 CD14 molecule involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:12594207) RGD
Ensembl
MGI
PMID:12594207 PMID:22511970 GO_REF:0000107 RGD:7183752 NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
JBrowse link
G CD180 CD180 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1860539|PMID:10880523) MGI
Ensembl
PMID:10880523 GO_REF:0000107 MGI:1860539 NCBI chr 5:46,799,607...46,815,214
Ensembl chr 5:48,364,874...48,381,694
JBrowse link
G CD300LB CD300 molecule like family member b acts_upstream_of_or_within ISO (MGI:5446972|PMID:22772446) MGI PMID:22772446 MGI:5446972 NCBI chr17:68,466,870...68,477,698
Ensembl chr17:74,024,132...74,034,412
JBrowse link
G CD36 CD36 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3587138|PMID:16061696) MGI
Ensembl
PMID:16061696 GO_REF:0000107 MGI:3587138 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865
JBrowse link
G CD40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
JBrowse link
G CD68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chr17:7,610,725...7,613,696
Ensembl chr17:7,596,947...7,599,981
JBrowse link
G CD80 CD80 molecule acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chr 3:116,646,590...116,683,725
Ensembl chr 3:123,559,559...123,594,870
JBrowse link
G CD86 CD86 molecule acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) RGD
MGI
PMID:19047410 PMID:21039614 MGI:3828894 RGD:4892198 NCBI chr 3:119,151,884...119,217,641
Ensembl chr 3:126,059,008...126,124,339
JBrowse link
G CDC73 cell division cycle 73 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,581,730...168,710,915
Ensembl chr 1:172,875,365...173,004,934
JBrowse link
G CDK19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chr 6:108,413,832...108,619,053
Ensembl chr 6:112,483,434...112,686,987
JBrowse link
G CDK4 cyclin dependent kinase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:78049|PMID:8543804) MGI
Ensembl
PMID:8543804 GO_REF:0000107 MGI:78049 NCBI chr12:31,174,446...31,178,597
Ensembl chr12:31,434,594...31,438,876
JBrowse link
G CEBPB CCAAT enhancer binding protein beta ISO RGD PMID:18405661 RGD:10401220 NCBI chr20:46,533,163...46,535,282 JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chr14:3,937,200...3,939,112
Ensembl chr14:22,033,654...22,035,219
JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942
JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (MGI:73245|PMID:7751651) MGI PMID:7751651 MGI:73245 NCBI chr2A:6,856,242...6,874,567 JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chr15:62,949,264...63,053,994
Ensembl chr15:80,443,096...80,526,948
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chr 5:127,496,951...127,499,325
Ensembl chr 5:133,660,775...133,663,146
JBrowse link
G CSF3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chr17:17,271,074...17,273,493
Ensembl chr17:17,491,276...17,493,729
JBrowse link
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:10,884,353...10,913,246
Ensembl chr11:10,610,892...10,639,808
JBrowse link
G CTSG cathepsin G involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:5,342,517...5,345,218
Ensembl chr14:23,466,265...23,468,960
JBrowse link
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:6162390|PMID:23499256) RGD
ARUK-UCL
PMID:10422773 PMID:23499256 MGI:6162390 RGD:4892028 NCBI chr 3:39,158,346...39,176,604
Ensembl chr 3:39,440,955...39,457,219
JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 ISO RGD PMID:10738946 RGD:5135239 NCBI chr 4:50,325,248...50,327,165
Ensembl chr 4:56,153,899...56,159,474
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
JBrowse link
G CXCL16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chr17:4,789,280...4,795,656
Ensembl chr17:4,778,717...4,785,639
JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 ISO RGD PMID:16239643 RGD:5135237 NCBI chr 4:50,092,989...50,095,541
Ensembl chr 4:55,925,562...55,986,555
JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 involved_in ISO
IEA
RGD
Ensembl
PMID:15778492 GO_REF:0000107 RGD:5135262 NCBI chr 4:50,357,643...50,359,822
Ensembl chr 4:56,189,961...56,192,402
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in ISO
IEA
RGD
Ensembl
PMID:31442273 GO_REF:0000107 RGD:150540302 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164
JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:20665543 RGD:4145535 NCBI chr10:99,431,762...99,439,619
Ensembl chr10:102,896,376...102,901,514
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,696,798...92,912,425
Ensembl chr 9:121,143,457...121,254,336
JBrowse link
G EDNRB endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chr13:59,112,349...59,136,615
Ensembl chr13:78,153,020...78,177,286
JBrowse link
G EFNB2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr13:87,629,831...87,675,652
Ensembl chr13:106,770,296...106,815,548
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chr10:92,365,267...92,511,852
Ensembl chr10:95,828,094...95,983,257
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chr 9:108,108,780...108,114,806
Ensembl chr 9:137,077,207...137,083,031
JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chr2A:46,403,411...46,492,734
Ensembl chr2A:47,332,308...47,421,560
JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
JBrowse link
G FCAR Fc fragment of IgA receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr19:51,919,345...51,935,340
Ensembl chr19:60,614,405...60,630,480
JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G FUBP1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chr 1:77,162,675...77,198,486 JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126
JBrowse link
G GBP2 guanylate binding protein 2 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) MGI PMID:18025219 MGI:4412460 NCBI chr 1:91,816,602...91,836,594
Ensembl chr 1:90,569,151...90,588,158
JBrowse link
G GFER growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chr16:716,640...720,196
Ensembl chr16:2,073,064...2,076,592
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20547752) UniProt
Ensembl
PMID:20547752 GO_REF:0000107 NCBI chr 1:95,139,171...95,151,054
Ensembl chr 1:93,876,245...93,883,528
JBrowse link
G GHSR growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chr 3:169,448,217...169,458,602
Ensembl chr 3:177,633,039...177,638,202
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,185,025...27,201,146
Ensembl chr17:27,706,776...27,717,857
JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chr 5:172,704,978...172,744,907
Ensembl chr 5:179,790,662...179,807,410
JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chr11:62,942,756...62,945,701
Ensembl chr11:66,253,421...66,256,472
JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO (MGI:6437701|PMID:32513690) MGI PMID:32513690 MGI:6437701 NCBI chr2A:26,240,365...26,285,982
Ensembl chr2A:26,334,043...26,379,059
JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861
JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:152,486,125...152,514,004
Ensembl chr 5:159,108,915...159,131,007
JBrowse link
G HDAC5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chr17:13,273,052...13,319,695
Ensembl chr17:13,446,836...13,479,140
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
G HMGB2 high mobility group box 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chr 1:82,778,489...82,798,987
Ensembl chr 1:117,775,770...117,796,679
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chr19:7,731,828...7,776,101
Ensembl chr19:8,579,211...8,624,029
JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
JBrowse link
G IFNG interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) MGI PMID:18791161 MGI:3821815 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IL10 interleukin 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717) MGI
Ensembl
PMID:19047410 PMID:21609717 GO_REF:0000107 MGI:3828894 MGI:5013871 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G IL12A interleukin 12A acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) MGI PMID:19047410 MGI:3828894 NCBI chr 3:157,011,675...157,019,897
Ensembl chr 3:165,061,505...165,068,666
JBrowse link
G IL12B interleukin 12B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) MGI
Ensembl
PMID:18025219 PMID:21606371 GO_REF:0000107 MGI:4412460 MGI:5013875 NCBI chr 5:154,706,467...154,722,231
Ensembl chr 5:161,325,303...161,335,381
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:23200736 RGD:7175528 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chr 1:182,500,680...182,507,098
Ensembl chr 1:186,779,207...186,785,928
JBrowse link
G IL6 interleukin 6 acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371)
(PMID:23776175)
RGD
MGI
PMID:2789217 PMID:19047410 PMID:21606371 PMID:23776175 MGI:3828894 MGI:5013875 RGD:11049548 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chr  X:143,560,802...143,570,185
Ensembl chr  X:153,446,827...153,460,602
JBrowse link
G IRF3 interferon regulatory factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5013875|PMID:21606371) MGI
Ensembl
PMID:21606371 GO_REF:0000107 MGI:5013875 NCBI chr19:46,674,193...46,680,464
Ensembl chr19:55,593,627...55,599,903
JBrowse link
G IRF8 interferon regulatory factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3653161|PMID:9348310) MGI
Ensembl
PMID:9348310 GO_REF:0000107 MGI:3653161 NCBI chr16:66,568,370...66,591,949
Ensembl chr16:85,905,334...85,929,073
JBrowse link
G IRGM immunity related GTPase M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:146,274,097...146,329,979
Ensembl chr 5:152,278,581...152,308,182
JBrowse link
G JAK2 Janus kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5013875|PMID:21606371) MGI
Ensembl
PMID:21606371 GO_REF:0000107 MGI:5013875 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G KMO kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chr 1:217,094,037...217,157,827
Ensembl chr 1:222,075,268...222,138,866
JBrowse link
G LBP lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12594207) MGI
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr20:34,670,128...34,703,046
Ensembl chr20:35,780,768...35,813,188
JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:19329498 RGD:2316495 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
JBrowse link
G LDOC1 LDOC1 regulator of NFKB signaling involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:130,368,487...130,369,951 JBrowse link
G LITAF lipopolysaccharide induced TNF factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3687609|PMID:16954198) MGI
Ensembl
PMID:16954198 GO_REF:0000107 MGI:3687609 NCBI chr16:10,488,738...10,527,843
Ensembl chr16:11,714,325...11,750,521
JBrowse link
G LOC100985633 caspase-1 involved_in ISO (PMID:15383541) UniProt PMID:15383541 NCBI chr11:100,031,979...100,041,771
Ensembl chr11:103,522,260...103,524,354
JBrowse link
G LTC4S leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chr 5:174,946,346...174,950,805 JBrowse link
G LY96 lymphocyte antigen 96 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:70,525,058...70,567,839
Ensembl chr 8:72,169,986...72,207,372
JBrowse link
G MALT1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16831874) UniProt PMID:16831874 NCBI chr18:52,060,878...52,141,985
Ensembl chr18:55,395,462...55,473,574
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,205,124...7,215,776
Ensembl chr19:8,057,598...8,066,512
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MIR224 microRNA mir-224 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr  X:141,537,127...141,537,207
Ensembl chr  X:151,495,584...151,495,664
JBrowse link
G MIR342 microRNA mir-342 involved_in IEA RNAcentral GO_REF:0000115 NCBI chr14:80,732,883...80,732,947 JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chr11:97,730,545...97,739,190
Ensembl chr11:101,221,393...101,230,104
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G MRC1 mannose receptor C-type 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486412|PMID:22832163) MGI
Ensembl
PMID:22832163 GO_REF:0000107 MGI:5486412 NCBI chr10:18,128,280...18,230,438
Ensembl chr10:18,398,310...18,500,367
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572
JBrowse link
G NCL nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chr2B:118,703,148...118,712,893
Ensembl chr2B:237,490,378...237,500,193
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:23776175) RGD
Ensembl
MGI
PMID:16842873 PMID:23776175 GO_REF:0000107 RGD:10045666 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098
JBrowse link
G NFKBIB NFKB inhibitor beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4437182|PMID:20060382) MGI
Ensembl
PMID:20060382 GO_REF:0000107 MGI:4437182 NCBI chr19:36,005,797...36,015,897 JBrowse link
G NFKBIL1 NFKB inhibitor like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,207,927...31,219,916
Ensembl chr 6:32,098,554...32,109,944
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:28847925)
(MGI:6095076|PMID:28847925)
(PMID:12483741)
UniProt
BHF-UCL
PMID:12483741 PMID:28847925 MGI:6095076 NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216
JBrowse link
G NLRP7 NLR family pyrin domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:51,966,886...51,990,971
Ensembl chr19:60,662,184...60,677,844
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219) RGD
Ensembl
MGI
PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107 MGI:3821815 MGI:4412460 RGD:5508737 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,195,122...47,215,277
Ensembl chr11:47,748,353...47,768,672
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
JBrowse link
G NUGGC nuclear GTPase, germinal center associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:27,299,051...27,351,350
Ensembl chr 8:24,500,131...24,551,201
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921
JBrowse link
G OPRK1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chr 8:49,650,844...49,677,494
Ensembl chr 8:47,029,313...47,056,577
JBrowse link
G P2RY2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chr11:68,294,366...68,319,118
Ensembl chr11:71,532,958...71,534,091
JBrowse link
G PAF1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,484,099...36,489,364
Ensembl chr19:45,031,819...45,037,169
JBrowse link
G PARK7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271
JBrowse link
G PDCD4 programmed cell death 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:107,465,084...107,493,285
Ensembl chr10:110,914,222...110,942,394
JBrowse link
G PDE2A phosphodiesterase 2A acts_upstream_of_or_within ISO (PMID:21571906) UniProt PMID:21571906 NCBI chr11:67,653,335...67,753,450
Ensembl chr11:70,875,552...70,975,322
JBrowse link
G PDE4B phosphodiesterase 4B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3521611|PMID:15585880) MGI
Ensembl
PMID:15585880 GO_REF:0000107 MGI:3521611 NCBI chr 1:65,038,120...65,620,764
Ensembl chr 1:67,045,911...67,506,291
JBrowse link
G PDE4D phosphodiesterase 4D acts_upstream_of_or_within ISO (MGI:3521611|PMID:15585880) MGI PMID:15585880 MGI:3521611 NCBI chr 5:53,510,287...55,039,181
Ensembl chr 5:55,749,214...56,670,111
JBrowse link
G PLAA phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:26,749,607...26,793,580
Ensembl chr 9:27,357,437...27,401,103
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
JBrowse link
G PLSCR1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chr 3:143,528,967...143,558,468
Ensembl chr 3:151,112,483...151,132,964
JBrowse link
G PLSCR2 phospholipid scramblase 2 acts_upstream_of_or_within ISO (PMID:17590392) UniProt PMID:17590392 NCBI chr 3:143,446,683...143,509,767
Ensembl chr 3:151,029,766...151,092,437
JBrowse link
G PLSCR3 phospholipid scramblase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17590392) UniProt
Ensembl
PMID:17590392 GO_REF:0000107 NCBI chr17:7,423,903...7,429,026
Ensembl chr17:7,410,668...7,414,409
JBrowse link
G PLSCR4 phospholipid scramblase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17590392) UniProt
Ensembl
PMID:17590392 GO_REF:0000107 NCBI chr 3:143,212,758...143,271,535
Ensembl chr 3:150,796,081...150,854,539
JBrowse link
G PPARD peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chr 6:34,903,798...34,987,208
Ensembl chr 6:36,003,988...36,081,132
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G PRPF8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chr17:1,635,991...1,669,703
Ensembl chr17:1,532,579...1,565,254
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chr 1:70,076,610...70,271,475
Ensembl chr 1:72,059,441...72,254,063
JBrowse link
G PYCARD PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,764,386...23,765,732
Ensembl chr16:31,571,363...31,573,828
JBrowse link
G RARA retinoic acid receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:20547752) RGD
Ensembl
UniProt
PMID:9918814 PMID:15728586 PMID:20547752 GO_REF:0000107 RGD:1580656 RGD:2298880 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
JBrowse link
G RHOA ras homolog family member A involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176424|PMID:11894097)
(MGI:2176422|PMID:11894098)
MGI
Ensembl
PMID:11894097 PMID:11894098 GO_REF:0000107 MGI:2176422 MGI:2176424 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268
JBrowse link
G SBNO2 strawberry notch homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,032...20,063
Ensembl chr19:1,086,968...1,136,272
JBrowse link
G SELENOS selenoprotein S involved_in ISO (PMID:18675776) BHF-UCL PMID:18675776 NCBI chr15:79,995,678...80,002,159
Ensembl chr15:99,279,203...99,285,682
JBrowse link
G SERPINE1 serpin family E member 1 involved_in ISO
IEA
RGD
Ensembl
PMID:20060032 GO_REF:0000107 RGD:13208812 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450
JBrowse link
G SGMS1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chr10:46,960,159...47,273,353
Ensembl chr10:49,076,984...49,116,154
JBrowse link
G SHPK sedoheptulokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:3,657,764...3,686,791 JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chr20:2,006,994...2,052,894
Ensembl chr20:1,773,271...1,818,106
JBrowse link
G SLC12A2 solute carrier family 12 member 2 involved_in ISO (MGI:6451247|PMID:31786261) MGI PMID:31786261 MGI:6451247 NCBI chr 5:123,499,267...123,603,777
Ensembl chr 5:129,262,134...129,364,563
JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chr16:68,512,407...68,552,763 JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chr16:10,196,432...10,198,205 JBrowse link
G SPON2 spondin 2 acts_upstream_of_or_within ISO (MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:2686801 NCBI chr 4:1,309,473...1,351,529
Ensembl chr 4:1,195,848...1,200,400
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634
JBrowse link
G STAP1 signal transducing adaptor family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:56,442,773...56,491,148
Ensembl chr 4:62,836,288...62,882,570
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544
JBrowse link
G STAT1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) MGI PMID:21606371 MGI:5013875 NCBI chr2B:78,270,642...78,316,074
Ensembl chr2B:196,186,906...196,232,280
JBrowse link
G TBXA2R thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chr19:2,621,606...2,632,800
Ensembl chr19:3,570,290...3,581,924
JBrowse link
G TFPI tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chr2B:74,744,154...74,834,338
Ensembl chr2B:192,541,881...192,581,384
JBrowse link
G TICAM1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chr19:3,836,100...3,852,017
Ensembl chr19:4,787,557...4,790,206
JBrowse link
G TICAM2 toll like receptor adaptor molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:110,935,649...110,960,019
Ensembl chr 5:116,734,092...116,734,799
JBrowse link
G TLR4 toll like receptor 4 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2686801|PMID:14691481)
(MGI:1860539|PMID:10880523)
(MGI:1860539|PMID:10880523), (MGI:5604854|PMID:24740015)
RGD
Ensembl
MGI
PMID:10880523 PMID:14691481 PMID:20438866 PMID:24740015 GO_REF:0000107 MGI:1860539 MGI:2686801 MGI:5604854 RGD:7777075 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TLR5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chr 1:198,787,046...198,819,537
Ensembl chr 1:203,798,767...203,801,343
JBrowse link
G TNF tumor necrosis factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371) RGD
MGI
Ensembl
PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... GO_REF:0000107 MGI:3828894 MGI:4437182 MGI:5013875 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,915,743...10,957,765
Ensembl chr 1:12,130,663...12,172,646
JBrowse link
G TNFSF4 TNF superfamily member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
JBrowse link
G TNIP2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chr 4:2,884,265...2,899,160 JBrowse link
G TNIP3 TNFAIP3 interacting protein 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:113,343,082...113,428,022
Ensembl chr 4:124,481,721...124,577,599
JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175) MGI
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr11:36,457,633...36,483,616
Ensembl chr11:36,335,609...36,356,334
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:26383906 RGD:127284850 NCBI chr 6:40,861,283...40,874,446
Ensembl chr 6:42,163,337...42,183,091
JBrowse link
G TRIM41 tripartite motif containing 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:176,449,281...176,461,840
Ensembl chr 5:183,699,842...183,711,522
JBrowse link
G TSPO translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chr22:24,034,918...24,046,370
Ensembl chr22:42,233,619...42,244,930
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G VIM vimentin involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chr 9:2,428,639...2,463,796
Ensembl chr 9:2,621,199...2,653,980
JBrowse link
G VWF von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chr12:6,073,836...6,249,806
Ensembl chr12:5,990,612...6,165,153
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
G XBP1 X-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chr2B:115,052,768...115,056,479
Ensembl chr2B:233,862,505...233,866,225
JBrowse link
G CD14 CD14 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12594207) MGI
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
JBrowse link
G CD36 CD36 molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3587138|PMID:16061696)
(MGI:3528769|PMID:15690042)
MGI
Ensembl
PMID:15690042 PMID:16061696 GO_REF:0000107 MGI:3528769 MGI:3587138 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865
JBrowse link
G LBP lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12594207) MGI
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr20:34,670,128...34,703,046
Ensembl chr20:35,780,768...35,813,188
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176422|PMID:11894098) MGI
Ensembl
PMID:11894098 GO_REF:0000107 MGI:2176422 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268
JBrowse link
G TIRAP TIR domain containing adaptor protein acts_upstream_of_or_within ISO (MGI:3528769|PMID:15690042) MGI PMID:15690042 MGI:3528769 NCBI chr11:121,100,558...121,112,844
Ensembl chr11:125,018,064...125,022,309
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3528769|PMID:15690042)
(PMID:12594207)
MGI
Ensembl
PMID:12594207 PMID:15690042 GO_REF:0000107 MGI:3528769 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TLR4 toll like receptor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178646|PMID:10549626) MGI
Ensembl
PMID:10549626 GO_REF:0000107 MGI:2178646 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chr13:58,166,872...58,176,146
Ensembl chr13:77,211,430...77,222,201
JBrowse link
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
JBrowse link
G CYRIB CYFIP related Rac1 interactor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:126,478,020...126,653,936
Ensembl chr 8:129,209,655...129,272,844
JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO (MGI:3608295|PMID:12385742) MGI PMID:12385742 MGI:3608295 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637
JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:95,003,246...95,010,577
Ensembl chr2B:213,133,017...213,134,774
JBrowse link
G NCAM1 neural cell adhesion molecule 1 ISO RGD PMID:19853610 RGD:2325979 NCBI chr11:107,845,507...108,160,441
Ensembl chr11:111,925,677...112,000,401
JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:35,984,453...36,005,582
Ensembl chr19:44,533,965...44,554,799
JBrowse link
G TNF tumor necrosis factor ISO streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
cellular response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTK Bruton tyrosine kinase ISO RGD PMID:10744701 RGD:1600536 NCBI chr  X:90,551,874...90,588,786
Ensembl chr  X:100,684,017...100,725,187
JBrowse link
G CLEC7A C-type lectin domain containing 7A involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr12:10,161,780...10,174,943
Ensembl chr12:10,410,384...10,425,452
JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,258,376...5,283,747
Ensembl chr17:5,247,307...5,270,817
JBrowse link
G SYK spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G DEFB124 defensin beta 124 involved_in ISO (PMID:24955228) UniProt PMID:24955228 NCBI chr20:27,757,611...27,773,287
Ensembl chr20:28,394,050...28,399,024
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (MGI:5790524|PMID:27374331) CAFA PMID:27374331 MGI:5790524 NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3686795|PMID:16949315) RGD
Ensembl
MGI
PMID:16949315 PMID:24169446 GO_REF:0000107 MGI:3686795 RGD:13204728 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2176422|PMID:11894098) MGI
Ensembl
PMID:11894098 GO_REF:0000107 MGI:2176422 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) MGI PMID:16949315 MGI:3686795 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:135,996,265...135,997,909
Ensembl chr 5:142,113,082...142,118,966
JBrowse link
G TLR1 toll like receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19931471) MGI
Ensembl
PMID:19931471 GO_REF:0000107 NCBI chr 4:33,119,485...33,133,541
Ensembl chr 4:38,979,006...38,981,366
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(PMID:19931471) MGI
Ensembl
UniProt
PMID:19931471 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331
JBrowse link
cellular response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGFBPL1 insulin like growth factor binding protein like 1 involved_in ISO (PMID:15845387) UniProt PMID:15845387 NCBI chr 9:38,253,300...38,271,260 JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G NOTCH2 notch receptor 2 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G TXNIP thioredoxin interacting protein involved_in ISO (PMID:18541147) UniProt PMID:18541147 NCBI chr 1:121,763,312...121,767,468 JBrowse link
cellular response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579
JBrowse link
G IFIT1B interferon induced protein with tetratricopeptide repeats 1B involved_in IEA InterPro GO_REF:0000002 NCBI chr10:86,094,636...86,109,924
Ensembl chr10:89,648,070...89,649,517
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:24500530) AgBase PMID:24500530 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019
JBrowse link
G NR1I2 nuclear receptor subfamily 1 group I member 2 involved_in ISO (PMID:24525126) AgBase PMID:24525126 NCBI chr 3:116,901,579...116,940,366
Ensembl chr 3:123,815,135...123,853,129
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6103025|PMID:28835460) MGI
Ensembl
PMID:28835460 GO_REF:0000107 MGI:6103025 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
cellular response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chr 1:129,937,993...129,983,747 JBrowse link
G ARF1 ADP ribosylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,484,803...203,501,395
Ensembl chr 1:208,695,615...208,712,105
JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007
JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in ISO (PMID:25609812) UniProt PMID:25609812 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G CALR calreticulin ISO RGD PMID:31399043 RGD:151347548 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416
JBrowse link
G CCL19 C-C motif chemokine ligand 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,525,820...34,527,628
Ensembl chr 9:35,334,353...35,336,108
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:28146100) ARUK-UCL PMID:28146100 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G CHUK component of inhibitor of nuclear factor kappa B kinase complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:96,794,228...96,835,449
Ensembl chr10:100,280,490...100,316,918
JBrowse link
G CREBBP CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:2151262 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 ISO RGD PMID:31442273 RGD:150540302 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G EIF5A eukaryotic translation initiation factor 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,341,076...7,346,570
Ensembl chr17:7,327,363...7,333,270
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6478092|PMID:25741008) MGI
Ensembl
PMID:25741008 GO_REF:0000107 MGI:6478092 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:4452060|PMID:20457904) MGI PMID:20457904 MGI:4452060 NCBI chr13:9,283,747...9,381,553
Ensembl chr13:27,627,178...27,723,940
JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:28389568) UniProt PMID:28389568 NCBI chr10:98,849,000...98,986,443
Ensembl chr10:102,316,329...102,452,439
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in ISO (PMID:9557682) UniProt PMID:9557682 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442
JBrowse link
G GSDME gasdermin E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,373,485...25,433,001
Ensembl chr 7:24,977,838...25,039,525
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:25609812) UniProt PMID:25609812 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723
JBrowse link
G IFI6 interferon alpha inducible protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,929,129...26,935,205
Ensembl chr 1:27,972,866...27,978,890
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:49,560,620...49,612,086
Ensembl chr2B:166,928,994...166,980,170
JBrowse link
G IFNB1 interferon beta 1 involved_in ISO (MGI:5645191|PMID:24882218)
(PMID:28146100)
UniProt
ARUK-UCL
PMID:24882218 PMID:28146100 MGI:5645191 NCBI chr 9:20,884,742...20,886,317 JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,070,565...182,096,797
Ensembl chr 1:186,351,807...186,377,971
JBrowse link
G IL10 interleukin 10 ISO porcine reproductive and respiratory syndrome virus RGD PMID:31442273 RGD:150540302 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G IL12A interleukin 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:157,011,675...157,019,897
Ensembl chr 3:165,061,505...165,068,666
JBrowse link
G IL21 interleukin 21 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chr 4:114,795,979...114,806,936
Ensembl chr 4:125,943,495...125,951,915
JBrowse link
G IL6 interleukin 6 involved_in ISO (MGI:5450752|PMID:23045607) UniProt PMID:23045607 MGI:5450752 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G IRF3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,674,193...46,680,464
Ensembl chr19:55,593,627...55,599,903
JBrowse link
G IRGM immunity related GTPase M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:146,274,097...146,329,979
Ensembl chr 5:152,278,581...152,308,182
JBrowse link
G LGALS8 galectin 8 involved_in ISO (PMID:28077878) UniProt PMID:28077878 NCBI chr 1:212,083,584...212,112,182 JBrowse link
G LGALS9 galectin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959
JBrowse link
G LOC100978202 ADP-ribosylation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:123,707,275...123,709,101
Ensembl chr 1:208,695,615...208,712,105
JBrowse link
G MAPK11 mitogen-activated protein kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,492,664...30,499,456
Ensembl chr22:49,492,693...49,495,732
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,809,644...97,822,063
Ensembl chr11:101,294,475...101,306,762
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098
JBrowse link
G NLRP3 NLR family pyrin domain containing 3 involved_in ISO (PMID:33231615) UniProt PMID:33231615 NCBI chr 1:223,052,307...223,084,736
Ensembl chr 1:228,505,147...228,537,216
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,511,984...110,525,343
Ensembl chr12:113,896,760...113,921,814
JBrowse link
G PENK proenkephalin ISO RGD PMID:8411369 RGD:10003023 NCBI chr 8:52,864,388...52,870,144
Ensembl chr 8:50,234,170...50,239,949
JBrowse link
G POU2AF1 POU class 2 homeobox associating factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:106,231,870...106,258,822
Ensembl chr11:110,078,850...110,103,996
JBrowse link
G POU2F2 POU class 2 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,974,635...39,065,103
Ensembl chr19:47,570,891...47,611,589
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:9001385 RGD:9850285 NCBI chr 6:32,423,614...32,429,062
Ensembl chr 6:33,539,060...33,564,402
JBrowse link
G PYDC5 pyrin domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,354,730...134,355,243 JBrowse link
G RIOK3 RIO kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,703,893...16,734,160
Ensembl chr18:20,331,222...20,360,825
JBrowse link
G RRP1B ribosomal RNA processing 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,916,109...29,952,749
Ensembl chr21:43,217,516...43,251,192
JBrowse link
G S100A6 S100 calcium binding protein A6 involved_in ISO (PMID:25480733) AgBase PMID:25480733 NCBI chr 1:128,889,749...128,891,425
Ensembl chr 1:132,518,834...132,520,499
JBrowse link
G SMAD3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TLR3 toll like receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:178,238,352...178,256,264
Ensembl chr 4:190,446,487...190,462,728
JBrowse link
G TLR7 toll like receptor 7 involved_in ISO (MGI:3818095|PMID:18802055) MGI PMID:18802055 MGI:3818095 NCBI chr  X:5,479,247...5,504,810
Ensembl chr  X:12,767,981...12,790,517
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,459,180...97,497,175
Ensembl chr 3:104,139,473...104,178,074
JBrowse link
G TRIM6 tripartite motif containing 6 involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chr11:5,731,256...5,748,057
Ensembl chr11:5,413,491...5,460,532
JBrowse link
G VWCE von Willebrand factor C and EGF domains involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,557,167...56,596,311
Ensembl chr11:59,922,172...59,959,747
JBrowse link
G WDFY4 WDFY family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6257237|PMID:30409884) MGI
Ensembl
PMID:30409884 GO_REF:0000107 MGI:6257237 NCBI chr10:45,262,213...45,560,401 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO RGD PMID:20226086 RGD:13673889 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438
JBrowse link
clearance of foreign intracellular DNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in ISO (PMID:20062055) UniProt PMID:20062055 NCBI chr22:19,866,522...19,872,836 JBrowse link
complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2 complement C2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,590,135...31,606,368 JBrowse link
G C3 complement C3 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:5,708,211...5,753,178
Ensembl chr19:6,629,287...6,674,699
JBrowse link
G C5 complement C5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:92,069,574...92,202,513
Ensembl chr 9:120,426,354...120,523,856
JBrowse link
G C8A complement C8 alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:56,137,596...56,201,975
Ensembl chr 1:57,847,726...57,912,392
JBrowse link
G C9 complement C9 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:71,011,961...71,090,243
Ensembl chr 5:76,051,911...76,130,725
JBrowse link
G CFB complement factor B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096110|PMID:9238044)
(MGI:6100611|PMID:27564415)
MGI
UniProt
PMID:9238044 PMID:27564415 GO_REF:0000043 MGI:1096110 MGI:6100611 NCBI chr 6:31,606,716...31,612,782 JBrowse link
G CFH complement factor H acts_upstream_of_or_within ISO (MGI:6100611|PMID:27564415) MGI PMID:27564415 MGI:6100611 NCBI chr 1:172,155,882...172,251,632
Ensembl chr 1:176,455,247...176,525,521
JBrowse link
G CFP complement factor properdin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,060,106...40,066,720
Ensembl chr  X:47,956,191...47,961,965
JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) involved_in ISO (PMID:11981823) ARUK-UCL PMID:11981823 NCBI chr 1:183,094,601...183,246,957 JBrowse link
G CR2 complement C3d receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,052,798...183,088,385
Ensembl chr 1:187,330,483...187,366,069
JBrowse link
complement activation, lectin pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COLEC10 collectin subfamily member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:115,758,592...115,798,548
Ensembl chr 8:118,277,484...118,317,271
JBrowse link
G COLEC11 collectin subfamily member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:3,610,679...3,659,739
Ensembl chr2A:3,529,358...3,579,517
JBrowse link
G FCN1 ficolin 1 involved_in ISO (PMID:16116205) ComplexPortal PMID:16116205 NCBI chr 9:106,039,315...106,047,648
Ensembl chr 9:135,040,310...135,049,111
JBrowse link
G FCN2 ficolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:105,995,807...106,020,389
Ensembl chr 9:134,997,038...135,018,992
JBrowse link
G FCN3 ficolin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5473786|PMID:16328467) MGI
Ensembl
PMID:16328467 GO_REF:0000107 MGI:5473786 NCBI chr 1:26,620,373...26,636,424
Ensembl chr 1:27,676,866...27,683,861
JBrowse link
G LOC100970659 keratin, type II cytoskeletal 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,083,858...36,089,521
Ensembl chr12:36,861,585...36,866,725
JBrowse link
G MASP1 MBL associated serine protease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:184,241,611...184,317,272
Ensembl chr 3:192,707,784...192,782,196
JBrowse link
G MASP2 MBL associated serine protease 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5473786|PMID:16328467) MGI
Ensembl
InterPro
PMID:16328467 GO_REF:0000002 GO_REF:0000107 MGI:5473786 NCBI chr 1:9,787,565...9,810,276
Ensembl chr 1:11,009,760...11,030,734
JBrowse link
G MBL2 mannose binding lectin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3577322|PMID:15148336)
(PMID:15148336)
MGI
UniProt
InterPro
Ensembl
PMID:15148336 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:3577322 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
JBrowse link
contact inhibition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G TSPO translocator protein ISO RGD PMID:18190798 RGD:2317142 NCBI chr22:24,034,918...24,046,370
Ensembl chr22:42,233,619...42,244,930
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide involved_in ISO (PMID:20421939) UniProt PMID:20421939 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G CFHR1 complement factor H related 1 involved_in ISO (PMID:23487775) UniProt PMID:23487775 NCBI chr 1:172,267,658...172,337,130 JBrowse link
G CFHR2 complement factor H related 2 involved_in ISO (PMID:23487775) UniProt PMID:23487775 NCBI chr 1:172,481,728...172,522,715 JBrowse link
G CFHR5 complement factor H related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:172,541,948...172,574,591
Ensembl chr 1:176,876,635...176,908,723
JBrowse link
G F2 coagulation factor II, thrombin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G HRG histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:183,701,069...183,712,365
Ensembl chr 3:192,168,299...192,180,539
JBrowse link
G KRT6A keratin 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,270,961...36,277,035
Ensembl chr12:37,048,390...37,054,607
JBrowse link
G REG3G regenerating family member 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:79,116,083...79,118,886
Ensembl chr2A:80,680,615...80,683,748
JBrowse link
G ROMO1 reactive oxygen species modulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,026,660...32,028,314
Ensembl chr20:33,148,002...33,149,345
JBrowse link
G SPAG11A sperm associated antigen 11A involved_in ISO (PMID:16411022) UniProt PMID:16411022 NCBI chr 8:11,094,358...11,110,481 JBrowse link
cytoplasmic pattern recognition receptor signaling pathway in response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX58 DExH-box helicase 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,203,216...15,214,559
Ensembl chr17:15,424,437...15,435,582
JBrowse link
defense response to bacterium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 acts_upstream_of_or_within ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chr 1:136,602,140...136,611,469
Ensembl chr 1:140,514,247...140,523,623
JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 acts_upstream_of_or_within ISO (MGI:5525040|PMID:23684986) MGI PMID:23684986 MGI:5525040 NCBI chr21:13,352,222...13,402,165
Ensembl chr21:26,744,807...26,788,736
JBrowse link
G AICDA activation induced cytidine deaminase acts_upstream_of_or_within ISO (MGI:3032861|PMID:14766966) MGI PMID:14766966 MGI:3032861 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917
JBrowse link
G AKIRIN2 akirin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,549,728...85,577,114 JBrowse link
G ANKRD17 ankyrin repeat domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,939,013...51,124,185
Ensembl chr 4:56,770,798...57,439,365
JBrowse link
G ANXA3 annexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:45,585,873...45,644,783
Ensembl chr 4:51,432,846...51,491,677
JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85481|PMID:9009202) MGI
Ensembl
PMID:9009202 GO_REF:0000107 MGI:85481 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005
JBrowse link
G BPI bactericidal permeability increasing protein involved_in ISO
IEA
RGD
UniProt
PMID:11445707 GO_REF:0000043 RGD:1331346 NCBI chr20:34,633,243...34,661,171
Ensembl chr20:35,739,700...35,771,910
JBrowse link
G CAMP cathelicidin antimicrobial peptide acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5504542|PMID:23670560)
(PMID:21115716)
MGI
UniProt
InterPro
Ensembl
PMID:21115716 PMID:23670560 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:5504542 NCBI chr 3:48,137,785...48,139,893