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ONTOLOGY REPORT - ANNOTATIONS

Term:detection of chemical stimulus
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Accession:GO:0009593 term browser browse the term
Definition:The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal.
Synonyms:exact_synonym: chemoperception;   detection of chemical substance
 related_synonym: chemoreception;   perception of chemical stimulus;   perception of chemical substance

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detection of chemical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drgx dorsal root ganglia homeobox acts_upstream_of_or_within ISO (PMID:11498051) MGI PMID:11498051 NCBI chrNW_004955556:842,714...870,248
Ensembl chrNW_004955556:842,714...870,248 		JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in ISO (MGI:4939978|PMID:21217009) UniProt PMID:21217009 MGI:4939978 NCBI chrNW_004955567:789,396...809,597
Ensembl chrNW_004955567:789,182...809,636 		JBrowse link
detection of calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm1 calmodulin 1 involved_in ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:23040497) BHF-UCL PMID:23040497 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924 		JBrowse link
G Casr calcium sensing receptor involved_in ISO (PMID:27434672) RGD
UniProt		 PMID:7816802 PMID:27434672 RGD:1298562 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210 		JBrowse link
G Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 involved_in ISO (PMID:10692449) UniProt PMID:10692449 NCBI chrNW_004955420:7,797,404...8,164,199
Ensembl chrNW_004955420:8,128,151...8,164,625 		JBrowse link
G Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 involved_in ISO (PMID:10692449) UniProt PMID:10692449 NCBI chrNW_004955420:8,428,823...8,445,940
Ensembl chrNW_004955420:8,435,179...8,445,676 		JBrowse link
G Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 involved_in ISO (PMID:10692449) UniProt PMID:10692449 NCBI chrNW_004955405:10,559,074...10,615,744
Ensembl chrNW_004955405:10,559,074...10,615,744 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:10830164) BHF-UCL PMID:10830164 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509 		JBrowse link
G Stim1 stromal interaction molecule 1 involved_in ISO (PMID:16005298) UniProt PMID:16005298 NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964 		JBrowse link
G Syt1 synaptotagmin 1 ISO RGD PMID:22229667 RGD:7205654 NCBI chrNW_004955405:17,840,012...18,372,156
Ensembl chrNW_004955405:17,839,884...18,372,566 		JBrowse link
detection of chemical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO (PMID:11754838) MGI PMID:11754838 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447 		JBrowse link
G LOC102015989 olfactory receptor 4E2 involved_in ISO (MGI:6162342|PMID:25901328)
(MGI:6187791|PMID:29659735)		 UniProt PMID:25901328 PMID:29659735 MGI:6162342 MGI:6187791 NCBI chrNW_004955550:2,352,164...2,353,090
Ensembl chrNW_004955550:2,352,164...2,353,090 		JBrowse link
G LOC102028688 olfactory receptor 15 involved_in ISO (MGI:6162342|PMID:25901328) UniProt PMID:25901328 MGI:6162342 NCBI chrNW_004955442:14,000,372...14,005,737
Ensembl chrNW_004955442:14,000,372...14,001,310 		JBrowse link
detection of chemical stimulus involved in sensory perception of bitter taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azgp1 alpha-2-glycoprotein 1, zinc-binding involved_in ISO (PMID:24248522) UniProt PMID:24248522 NCBI chrNW_004955573:902,153...910,481
Ensembl chrNW_004955573:899,798...912,272 		JBrowse link
G Ca6 carbonic anhydrase 6 involved_in ISO (PMID:24248522) UniProt PMID:24248522 NCBI chrNW_004955486:4,234,293...4,249,026
Ensembl chrNW_004955486:4,234,235...4,247,876 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:7596440 RGD:1599025 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO RGD PMID:12917372 RGD:1599039 NCBI chrNW_004955435:13,009,147...13,021,968
Ensembl chrNW_004955435:13,009,147...13,021,968 		JBrowse link
G Lpo lactoperoxidase involved_in ISO (PMID:24248522) UniProt PMID:24248522 NCBI chrNW_004955451:4,754,572...4,769,380
Ensembl chrNW_004955451:4,754,468...4,769,553 		JBrowse link
G Pigr polymeric immunoglobulin receptor involved_in ISO (PMID:24248522) UniProt PMID:24248522 NCBI chrNW_004955406:42,456,450...42,474,489
Ensembl chrNW_004955406:42,453,080...42,474,694 		JBrowse link
G Plcb2 phospholipase C beta 2 involved_in ISO PMID:9860142 RGD
UniProt		 PMID:9860142 RGD:729588 NCBI chrNW_004955416:7,221,326...7,240,743
Ensembl chrNW_004955416:7,218,417...7,240,739 		JBrowse link
G Rtp3 receptor transporter protein 3 involved_in ISO (PMID:16720576) HGNC-UCL PMID:16720576 NCBI chrNW_004955420:25,545,752...25,550,044 JBrowse link
G Rtp4 receptor transporter protein 4 involved_in ISO (PMID:16720576) HGNC-UCL PMID:16720576 NCBI chrNW_004955420:20,435,924...20,459,440 JBrowse link
G Tas2r16 taste 2 receptor member 16 involved_in ISO (PMID:16720576), (PMID:20022913) HGNC-UCL PMID:16720576 PMID:20022913 NCBI chrNW_004955479:4,591,015...4,591,920 JBrowse link
G Tas2r3 taste 2 receptor member 3 involved_in ISO (PMID:20022913) UniProt PMID:20022913 NCBI chrNW_004955494:1,799,438...1,800,388 JBrowse link
G Tas2r38 taste 2 receptor member 38 involved_in ISO (PMID:20022913) UniProt PMID:20022913 NCBI chrNW_004955494:1,659,692...1,662,712 JBrowse link
G Tas2r4 taste 2 receptor member 4 involved_in ISO (PMID:20022913) UniProt PMID:20022913 NCBI chrNW_004955494:1,790,395...1,791,294 JBrowse link
G Tas2r40 taste 2 receptor member 40 involved_in ISO (PMID:20022913) UniProt PMID:20022913 NCBI chrNW_004955494:415,607...416,569 JBrowse link
G Tas2r5 taste 2 receptor member 5 involved_in ISO (PMID:20022913) UniProt PMID:20022913 NCBI chrNW_004955494:1,775,222...1,776,226 JBrowse link
G Tas2r60 taste 2 receptor member 60 NOT|involved_in ISO (PMID:20022913) UniProt PMID:20022913 NCBI chrNW_004955494:220,847...221,851 JBrowse link
detection of chemical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO (PMID:12060708)
(PMID:11754838)		 MGI PMID:11754838 PMID:12060708 NCBI chrNW_004955491:5,487,788...5,491,562
Ensembl chrNW_004955491:5,488,249...5,491,447 		JBrowse link
G Trpa1 transient receptor potential cation channel subfamily A member 1 acts_upstream_of_or_within ISO (PMID:18272293)
(PMID:16564016), (PMID:18398506)
(PMID:16630838), (PMID:18297068)		 MGI PMID:16564016 PMID:16630838 PMID:18272293 PMID:18297068 PMID:18398506 NCBI chrNW_004955444:7,876,284...7,922,010
Ensembl chrNW_004955444:7,876,429...7,921,372 		JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 acts_upstream_of_or_within ISO (PMID:18272293)
(PMID:18297068)		 MGI PMID:18272293 PMID:18297068 NCBI chrNW_004955467:13,221,391...13,239,089
Ensembl chrNW_004955467:13,221,391...13,239,089 		JBrowse link
detection of chemical stimulus involved in sensory perception of smell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (MGI:5817509|PMID:28053034) ARUK-UCL PMID:28053034 MGI:5817509 NCBI chrNW_004955433:15,467,042...15,556,471 JBrowse link
G LOC102015989 olfactory receptor 4E2 involved_in ISO (MGI:6162372|PMID:27019154)
(MGI:5314551|PMID:22328155), (MGI:6154400|PMID:25185561)		 UniProt PMID:22328155 PMID:25185561 PMID:27019154 MGI:5314551 MGI:6154400 MGI:6162372 NCBI chrNW_004955550:2,352,164...2,353,090
Ensembl chrNW_004955550:2,352,164...2,353,090 		JBrowse link
G LOC102028688 olfactory receptor 15 involved_in ISO (MGI:6187791|PMID:29659735) UniProt PMID:29659735 MGI:6187791 NCBI chrNW_004955442:14,000,372...14,005,737
Ensembl chrNW_004955442:14,000,372...14,001,310 		JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:5817509|PMID:28053034) ARUK-UCL PMID:28053034 MGI:5817509 NCBI chrNW_004955438:14,609,779...14,765,516
Ensembl chrNW_004955438:14,609,424...14,759,673 		JBrowse link
detection of chemical stimulus involved in sensory perception of sour taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO (MGI:5315344|PMID:16891422) BHF-UCL PMID:16891422 MGI:5315344 NCBI chrNW_004955507:6,145,981...6,167,152
Ensembl chrNW_004955507:6,146,825...6,166,976 		JBrowse link
detection of chemical stimulus involved in sensory perception of sweet taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tas1r2 taste 1 receptor member 2 involved_in ISO (PMID:16720576) HGNC-UCL PMID:16720576 NCBI chrNW_004955527:377,269...392,833
Ensembl chrNW_004955527:376,083...392,282 		JBrowse link
G Tas1r3 taste 1 receptor member 3 involved_in ISO (PMID:16720576) HGNC-UCL PMID:16720576 NCBI chrNW_004955486:9,469,954...9,475,421
Ensembl chrNW_004955486:9,470,626...9,473,780 		JBrowse link
detection of chemical stimulus involved in sensory perception of taste term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO (MGI:5912987|PMID:28553944) UniProt PMID:28553944 MGI:5912987 NCBI chrNW_004955507:6,145,981...6,167,152
Ensembl chrNW_004955507:6,146,825...6,166,976 		JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258 		JBrowse link
G Tlr6 toll like receptor 6 acts_upstream_of_or_within ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955443:8,401,461...8,427,175
Ensembl chrNW_004955443:8,422,534...8,424,942 		JBrowse link
detection of hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin involved_in ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694 		JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (PMID:18156205) BHF-UCL PMID:18156205 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180 		JBrowse link
detection of hypoxic conditions in blood by carotid body chemoreceptor signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (PMID:14672995) MGI PMID:14672995 NCBI chrNW_004955482:418,101...422,058
Ensembl chrNW_004955482:419,213...421,583 		JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ly96 lymphocyte antigen 96 involved_in ISO (PMID:19252480) UniProt PMID:19252480 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4 group A member 1 involved_in ISO (MGI:7463870|PMID:37001519) UniProt PMID:37001519 MGI:7463870 NCBI chrNW_004955547:2,404,532...2,426,882
Ensembl chrNW_004955547:2,404,532...2,431,050 		JBrowse link
G Scarb1 scavenger receptor class B member 1 involved_in ISO (PMID:12651854) BHF-UCL PMID:12651854 NCBI chrNW_004955482:4,813,502...4,836,479
Ensembl chrNW_004955482:4,813,955...4,837,392 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (PMID:19252480)
(MGI:5913054|PMID:28098138)		 UniProt PMID:19252480 PMID:28098138 MGI:5913054 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr9 toll like receptor 9 involved_in ISO (PMID:17128265) BHF-UCL PMID:17128265 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:15998797)
(PMID:12527755)		 HGNC-UCL
MGI		 PMID:12527755 PMID:15998797 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
detection of oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO (PMID:11156968) MGI PMID:11156968 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163 		JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) BHF-UCL PMID:12847223 MGI:5572888 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll like receptor 1 acts_upstream_of_or_within ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955443:8,442,419...8,450,318
Ensembl chrNW_004955443:8,447,956...8,450,382 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) MGI PMID:19931471 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258 		JBrowse link
positive regulation of detection of glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Extl3 exostosin like glycosyltransferase 3 involved_in ISO (PMID:36240758) UniProt PMID:36240758 NCBI chrNW_004955403:51,076,323...51,102,435
Ensembl chrNW_004955403:51,076,319...51,102,435 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    response to stimulus 6681
      detection of stimulus 191
        detection of chemical stimulus 53
          detection of cAMP 0
          detection of calcium ion 10
          detection of carbohydrate stimulus + 1
          detection of carbon dioxide + 0
          detection of chemical stimulus involved in sensory perception + 26
          detection of hormone stimulus + 0
          detection of hydrogen ion + 0
          detection of hypoxic conditions in blood by chemoreceptor signaling + 1
          detection of jasmonic acid stimulus 0
          detection of misfolded protein 0
          detection of molecule of bacterial origin + 11
          detection of molecule of fungal origin 0
          detection of molecule of oomycetes origin 0
          detection of nutrient + 0
          detection of organic substance 0
          detection of oxygen + 3
          detection of pheromone 0
          detection of phosphate ion 0
          detection of redox state 0
          detection of salicylic acid stimulus 0
          detection of unfolded protein 0
          soluble molecule recognition 0
paths to the root