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ONTOLOGY REPORT - ANNOTATIONS

Term:detection of external stimulus
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Accession:GO:0009581 term browser browse the term
Definition:The series of events in which an external stimulus is received by a cell and converted into a molecular signal.
Synonyms:related_synonym: perception of external stimulus


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adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH11 retinol dehydrogenase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3584215|PMID:15790565) MGI
Ensembl		 PMID:15790565 GO_REF:0000107 MGI:3584215 NCBI chr14:48,256,951...48,275,831
Ensembl chr14:67,135,366...67,154,286 		JBrowse link
G RHO rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6477072|PMID:32960171) MGI
Ensembl		 PMID:32960171 GO_REF:0000107 MGI:6477072 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928 		JBrowse link
G RS1 retinoschisin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3055638|PMID:15326152) MGI
Ensembl		 PMID:15326152 GO_REF:0000107 MGI:3055638 NCBI chr  X:11,259,222...11,282,289
Ensembl chr  X:18,624,687...18,657,315 		JBrowse link
detection of cold stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIK2 glutamate ionotropic receptor kainate type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,720,430...99,903,582
Ensembl chr 6:103,334,707...103,783,092 		JBrowse link
detection of gravity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOX3 NADPH oxidase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1351720|PMID:10491954) MGI
Ensembl		 PMID:10491954 GO_REF:0000107 MGI:1351720 NCBI chr 6:153,210,190...153,270,955
Ensembl chr 6:159,174,261...159,234,642 		JBrowse link
G OTOP1 otopetrin 1 acts_upstream_of_or_within ISO (MGI:2654297|PMID:12651873) MGI PMID:12651873 MGI:2654297 Ensembl chr 4:4,269,521...4,307,585 JBrowse link
detection of hot stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WDR47 WD repeat domain 47 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6095492|PMID:29078390) MGI
Ensembl		 PMID:29078390 GO_REF:0000107 MGI:6095492 NCBI chr 1:111,347,559...111,419,866
Ensembl chr 1:110,512,347...110,584,155 		JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4366192|PMID:19815523) MGI
Ensembl		 PMID:19815523 GO_REF:0000107 MGI:4366192 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4366192|PMID:19815523) MGI
Ensembl		 PMID:19815523 GO_REF:0000107 MGI:4366192 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
G PDE6B phosphodiesterase 6B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2155023|PMID:11747369) MGI
Ensembl		 PMID:11747369 GO_REF:0000107 MGI:2155023 Ensembl chr 4:646,516...701,680 JBrowse link
G RHO rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2155023|PMID:11747369) MGI
Ensembl		 PMID:11747369 GO_REF:0000107 MGI:2155023 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928 		JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BEST1 bestrophin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3795256|PMID:16636205) MGI
Ensembl		 PMID:16636205 GO_REF:0000107 MGI:3795256 NCBI chr11:57,314,430...57,329,450
Ensembl chr11:60,672,835...60,687,417 		JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,504,804...41,533,501
Ensembl chr  X:49,356,994...49,385,678 		JBrowse link
G CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,906,894...2,030,991
Ensembl chr12:1,857,221...1,980,769 		JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3795256|PMID:16636205) MGI
Ensembl		 PMID:16636205 GO_REF:0000107 MGI:3795256 NCBI chr2B:39,137,777...39,399,007
Ensembl chr2B:156,379,469...156,639,328 		JBrowse link
G CCDC66 coiled-coil domain containing 66 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,504,388...56,557,617
Ensembl chr 3:57,720,490...57,773,326 		JBrowse link
G CEP250 centrosomal protein 250 involved_in ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chr20:31,782,894...31,847,152
Ensembl chr20:32,903,536...32,959,714 		JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,160,056...38,249,474
Ensembl chr16:57,292,093...57,375,460 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5315300|PMID:22447858) MGI
Ensembl		 PMID:22447858 GO_REF:0000107 MGI:5315300 NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867 		JBrowse link
G GJA10 gap junction protein alpha 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3654563|PMID:16820008) MGI
Ensembl		 PMID:16820008 GO_REF:0000107 MGI:3654563 NCBI chr 6:87,774,889...87,776,520
Ensembl chr 6:91,046,601...91,072,335 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3772743|PMID:18171936) MGI
Ensembl		 PMID:18171936 GO_REF:0000107 MGI:3772743 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714271|PMID:17065522) MGI
Ensembl		 PMID:17065522 GO_REF:0000107 MGI:3714271 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
G GRM6 glutamate metabotropic receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:174,142,754...174,156,294
Ensembl chr 5:181,434,031...181,447,341 		JBrowse link
G GUCY2F guanylate cyclase 2F, retinal involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:98,481,609...98,590,680
Ensembl chr  X:108,952,200...109,061,441 		JBrowse link
G LOC100974207 eyes shut homolog involved_in ISO (PMID:18836446), (PMID:18976725), (PMID:20696082), (PMID:22363543) CACAO PMID:18836446 PMID:18976725 PMID:20696082 PMID:22363543 NCBI chr 6:61,424,943...62,195,228 JBrowse link
G PRPH2 peripherin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5905515|PMID:28053051)
(MGI:6305433|PMID:26420485)		 MGI
Ensembl		 PMID:26420485 PMID:28053051 GO_REF:0000107 MGI:5905515 MGI:6305433 NCBI chr 6:42,284,818...42,316,150
Ensembl chr 6:43,582,317...43,608,011 		JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (MGI:3687059|PMID:12484775) MGI PMID:12484775 MGI:3687059 NCBI chr10:90,337,879...90,347,530
Ensembl chr10:93,848,166...93,857,887 		JBrowse link
G REEP6 receptor accessory protein 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr19:1,467,186...1,473,988 JBrowse link
G RGS9BP regulator of G protein signaling 9 binding protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3027216|PMID:14625292) MGI
Ensembl		 PMID:14625292 GO_REF:0000107 MGI:3027216 NCBI chr19:29,595,159...29,597,612
Ensembl chr19:38,343,663...38,344,370 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5905515|PMID:28053051) MGI
Ensembl		 PMID:28053051 GO_REF:0000107 MGI:5905515 NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) CACAO PMID:21521437 NCBI chr14:2,105,703...2,169,362
Ensembl chr14:20,185,236...20,247,064 		JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chr 5:9,349,473...9,852,183
Ensembl chr 5:9,168,549...9,564,356 		JBrowse link
G SEMA5B semaphorin 5B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5140622|PMID:21835343) MGI
Ensembl		 PMID:21835343 GO_REF:0000107 MGI:5140622 NCBI chr 3:119,996,933...120,116,899
Ensembl chr 3:126,900,966...126,986,186 		JBrowse link
G TULP1 TUB like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,058,422...35,073,472
Ensembl chr 6:36,151,747...36,166,160 		JBrowse link
detection of mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO3 anoctamin 3 ISO RGD PMID:23872594 RGD:9681745 NCBI chr11:26,287,123...26,618,710
Ensembl chr11:26,047,200...26,519,646 		JBrowse link
G JUP junction plakoglobin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,527,115...15,559,251
Ensembl chr17:15,747,163...15,777,479 		JBrowse link
G LOC100972297 nuclear pore complex-interacting protein family member B15 acts_upstream_of_or_within ISO (MGI:3512725|PMID:15545994)
(MGI:2449360|PMID:12514735)		 MGI PMID:12514735 PMID:15545994 MGI:2449360 MGI:3512725 NCBI chr16:604,927...1,697,831 JBrowse link
G PIEZO1 piezo type mechanosensitive ion channel component 1 (Er blood group) acts_upstream_of_or_within ISO (MGI:4833892|PMID:20813920) MGI PMID:20813920 MGI:4833892 NCBI chr16:69,428,461...69,498,454
Ensembl chr16:89,088,323...89,125,068 		JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2449360|PMID:12514735) MGI
Ensembl		 PMID:12514735 GO_REF:0000107 MGI:2449360 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775 		JBrowse link
detection of mechanical stimulus involved in equilibrioception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (MGI:3616414|PMID:16481439) MGI PMID:16481439 MGI:3616414 NCBI chr10:50,452,290...52,236,538
Ensembl chr10:52,666,969...53,536,611 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3578496|PMID:15846349) MGI PMID:15846349 MGI:3578496 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
detection of mechanical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASIC3 acid sensing ion channel subunit 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2155574|PMID:11754838) MGI
Ensembl		 PMID:11754838 GO_REF:0000107 MGI:2155574 NCBI chr 7:142,633,357...142,639,571
Ensembl chr 7:154,786,835...154,792,289 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 ISO RGD PMID:12591163 RGD:11570504 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:21037532 RGD:8549460 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G LOC100981428 acid-sensing ion channel 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2180082|PMID:11069180) MGI
Ensembl		 PMID:11069180 GO_REF:0000107 MGI:2180082 NCBI chr17:22,628,322...23,774,249 JBrowse link
G PIEZO2 piezo type mechanosensitive ion channel component 2 involved_in ISO (MGI:5574426|PMID:24717433) UniProt PMID:24717433 MGI:5574426 NCBI chr18:3,141,285...3,619,885
Ensembl chr18:5,407,467...5,882,928 		JBrowse link
G SCN10A sodium voltage-gated channel alpha subunit 10 involved_in ISO (MGI:5648148|PMID:25101983) MGI PMID:25101983 MGI:5648148 NCBI chr 3:38,593,765...38,691,172
Ensembl chr 3:38,876,068...38,972,247 		JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,741,485...38,948,400
Ensembl chr 3:39,024,921...39,128,015 		JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:53,468,290...53,643,747
Ensembl chr2B:170,944,974...171,054,013 		JBrowse link
G SERPINE2 serpin family E member 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3521551|PMID:15509762) MGI
Ensembl		 PMID:15509762 GO_REF:0000107 MGI:3521551 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
G TRPA1 transient receptor potential cation channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,551,685...68,605,336
Ensembl chr 8:70,210,352...70,262,627 		JBrowse link
detection of mechanical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO1 anoctamin 1 NOT|involved_in ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chr11:65,064,415...65,287,160
Ensembl chr11:68,473,555...68,576,451 		JBrowse link
G ASIC3 acid sensing ion channel subunit 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2450005|PMID:12060708)
(MGI:2155574|PMID:11754838)		 MGI
Ensembl		 PMID:11754838 PMID:12060708 GO_REF:0000107 MGI:2155574 MGI:2450005 NCBI chr 7:142,633,357...142,639,571
Ensembl chr 7:154,786,835...154,792,289 		JBrowse link
G BACE1 beta-secretase 1 ISO RGD PMID:28012171 RGD:13782150 NCBI chr11:112,120,950...112,151,505
Ensembl chr11:116,054,303...116,084,812 		JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:22187436 RGD:13514092 NCBI chr12:39,918,022...39,931,386
Ensembl chr12:40,797,293...40,811,409 		JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit ISO RGD PMID:15652389 RGD:150530460 NCBI chr15:57,493,730...57,530,463
Ensembl chr15:76,455,165...76,486,376 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO RGD PMID:27760212 RGD:12910551 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:27760212 PMID:28108674 RGD:12910551 RGD:13463594 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3604261|PMID:16190898) MGI
Ensembl		 PMID:16190898 GO_REF:0000107 MGI:3604261 NCBI chr 6:109,469,750...109,684,086
Ensembl chr 6:113,545,944...113,604,451 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A NOT|acts_upstream_of_or_within ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chr12:13,543,104...13,987,437
Ensembl chr12:13,969,387...14,388,799 		JBrowse link
G GRIN2D glutamate ionotropic receptor NMDA type subunit 2D NOT|acts_upstream_of_or_within ISO (MGI:3604261|PMID:16190898) MGI PMID:16190898 MGI:3604261 NCBI chr19:45,392,258...45,447,004 JBrowse link
G GRM8 glutamate metabotropic receptor 8 ISO RGD PMID:18533199 RGD:6771181 NCBI chr 7:118,430,086...119,249,147 JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO RGD PMID:20531396 RGD:7257680 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826 		JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:21843960 RGD:6482179 NCBI chr10:87,480,970...87,598,212
Ensembl chr10:91,009,941...91,125,158 		JBrowse link
G IL18 interleukin 18 ISO RGD PMID:19853379 RGD:2315887 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371 		JBrowse link
G ITGA2 integrin subunit alpha 2 ISO RGD PMID:18234883 RGD:2303705 NCBI chr 5:60,935,452...61,040,726
Ensembl chr 5:62,555,370...62,659,720 		JBrowse link
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,027,333...5,037,136
Ensembl chr12:4,950,938...4,952,425 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:20351485 RGD:5684352 Ensembl chr 1:136,007,476...136,047,355 JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:21238854 RGD:9835398 NCBI chr12:77,114,282...77,224,116
Ensembl chr12:79,969,517...80,070,796 		JBrowse link
G PHF24 PHD finger protein 24 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5616490|PMID:25242222) MGI
Ensembl		 PMID:25242222 GO_REF:0000107 MGI:5616490 NCBI chr 9:34,735,800...34,829,555
Ensembl chr 9:35,611,517...35,635,964 		JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,741,485...38,948,400
Ensembl chr 3:39,024,921...39,128,015 		JBrowse link
G SCN1A sodium voltage-gated channel alpha subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:53,258,614...53,348,131
Ensembl chr2B:170,736,651...170,822,014 		JBrowse link
G TLR4 toll like receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711 		JBrowse link
G TMEM120A transmembrane protein 120A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:68,026,666...68,034,896
Ensembl chr 7:82,437,650...82,444,882 		JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:16675114 RGD:7387300 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
G TRPA1 transient receptor potential cation channel subfamily A member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3623714|PMID:16630838) MGI
Ensembl		 PMID:16630838 GO_REF:0000107 MGI:3623714 NCBI chr 8:68,551,685...68,605,336
Ensembl chr 8:70,210,352...70,262,627 		JBrowse link
detection of mechanical stimulus involved in sensory perception of sound term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRV1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within ISO (MGI:3629345|PMID:16775142) MGI PMID:16775142 MGI:3629345 NCBI chr 5:24,208,844...24,811,284
Ensembl chr 5:24,341,808...24,945,477 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:3625390|PMID:16529873) MGI PMID:16529873 MGI:3625390 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G CHRNA10 cholinergic receptor nicotinic alpha 10 subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3771935|PMID:18077337) MGI
Ensembl		 PMID:18077337 GO_REF:0000107 MGI:3771935 NCBI chr11:3,543,450...3,552,036
Ensembl chr11:3,651,580...3,656,780 		JBrowse link
G CHRNA9 cholinergic receptor nicotinic alpha 9 subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3771935|PMID:18077337) MGI
Ensembl		 PMID:18077337 GO_REF:0000107 MGI:3771935 NCBI chr 4:34,654,043...34,675,984
Ensembl chr 4:40,509,475...40,528,869 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:105,538,215...105,769,973
Ensembl chr 1:104,249,891...104,481,259 		JBrowse link
G HPN hepsin involved_in ISO (MGI:3719967|PMID:17620368), (MGI:5306554|PMID:20683358), (MGI:5308539|PMID:17918732) UniProt PMID:17620368 PMID:17918732 PMID:20683358 MGI:3719967 MGI:5306554 MGI:5308539 NCBI chr19:31,985,761...32,012,841
Ensembl chr19:40,725,319...40,750,628 		JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,469,750...2,874,467 JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473 		JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5468200|PMID:23217710) MGI
Ensembl		 PMID:23217710 GO_REF:0000107 MGI:5468200 NCBI chr 6:35,367,304...35,389,595
Ensembl chr 6:36,569,008...36,589,102 		JBrowse link
G LOC103785466 stereocilin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3818235|PMID:18849963) MGI
Ensembl		 PMID:18849963 GO_REF:0000107 MGI:3818235 NCBI chr15:22,660,952...22,706,416
Ensembl chr15:40,740,387...40,757,999 		JBrowse link
G MKKS MKKS centrosomal shuttling protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3607949|PMID:16170314) MGI
Ensembl		 PMID:16170314 GO_REF:0000107 MGI:3607949 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:3712581|PMID:17523175) MGI PMID:17523175 MGI:3712581 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (MGI:4950645|PMID:21427143)
(MGI:3616414|PMID:16481439)		 MGI PMID:16481439 PMID:21427143 MGI:3616414 MGI:4950645 NCBI chr10:50,452,290...52,236,538
Ensembl chr10:52,666,969...53,536,611 		JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5565635|PMID:24334608) MGI
Ensembl		 PMID:24334608 GO_REF:0000107 MGI:5565635 NCBI chr10:97,608,969...97,632,508
Ensembl chr10:101,085,370...101,107,034 		JBrowse link
G PJVK pejvakin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5907777|PMID:28089576) Ensembl
MGI		 PMID:28089576 GO_REF:0000107 MGI:5907777 NCBI chr2B:65,708,635...65,725,766
Ensembl chr2B:183,413,265...183,423,224 		JBrowse link
G PTPRQ protein tyrosine phosphatase receptor type Q acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5315778|PMID:22357859) MGI
Ensembl		 PMID:22357859 GO_REF:0000107 MGI:5315778 NCBI chr12:77,957,758...78,200,206
Ensembl chr12:81,068,545...81,310,857 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242 		JBrowse link
G SLC12A2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:3625390|PMID:16529873) MGI PMID:16529873 MGI:3625390 NCBI chr 5:123,499,267...123,603,777
Ensembl chr 5:129,262,134...129,364,563 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3578496|PMID:15846349) MGI PMID:15846349 MGI:3578496 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
G STRC stereocilin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:22,562,313...22,633,064
Ensembl chr15:40,769,539...40,795,723
Ensembl chr15:40,769,539...40,795,723 		JBrowse link
G TMC1 transmembrane channel like 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5320864|PMID:22105175)
(MGI:5515249|PMID:23871232)		 MGI
Ensembl		 PMID:22105175 PMID:23871232 GO_REF:0000107 MGI:5320864 MGI:5515249 NCBI chr 9:51,974,326...52,200,228
Ensembl chr 9:71,400,783...71,620,858 		JBrowse link
G TMC2 transmembrane channel like 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5320864|PMID:22105175) MGI
Ensembl		 PMID:22105175 GO_REF:0000107 MGI:5320864 NCBI chr20:2,667,175...2,750,058
Ensembl chr20:2,409,961...2,513,365 		JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758 		JBrowse link
detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNA1 potassium voltage-gated channel subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,027,333...5,037,136
Ensembl chr12:4,950,938...4,952,425 		JBrowse link
G KCNK4 potassium two pore domain channel subfamily K member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:59,648,374...59,657,083
Ensembl chr11:62,994,544...63,001,229 		JBrowse link
detection of muscle stretch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:8,684,829...8,697,731
Ensembl chr 3:8,928,069...8,940,942 		JBrowse link
G CSRP3 cysteine and glycine rich protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,208,025...19,228,000
Ensembl chr11:19,121,234...19,140,820 		JBrowse link
G TCAP titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,622,318...17,625,252
Ensembl chr17:17,839,139...17,842,727 		JBrowse link
G TTN titin acts_upstream_of_or_within ISO (PMID:18765796) MGI PMID:18765796 NCBI chr2B:65,783,512...66,064,618 JBrowse link
detection of temperature stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO3 anoctamin 3 ISO RGD PMID:23872594 RGD:9681745 NCBI chr11:26,287,123...26,618,710
Ensembl chr11:26,047,200...26,519,646 		JBrowse link
G DRGX dorsal root ganglia homeobox acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2137781|PMID:11498051) MGI
Ensembl		 PMID:11498051 GO_REF:0000107 MGI:2137781 NCBI chr10:44,845,622...44,880,512 JBrowse link
G NGFR nerve growth factor receptor acts_upstream_of_or_within ISO (MGI:1098517|PMID:1317267) MGI PMID:1317267 MGI:1098517 NCBI chr17:8,089,600...8,109,361
Ensembl chr17:8,075,316...8,094,966 		JBrowse link
detection of temperature stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASIC3 acid sensing ion channel subunit 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2155574|PMID:11754838) MGI
Ensembl		 PMID:11754838 GO_REF:0000107 MGI:2155574 NCBI chr 7:142,633,357...142,639,571
Ensembl chr 7:154,786,835...154,792,289 		JBrowse link
detection of temperature stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO RGD PMID:20065990 RGD:5129094 NCBI chr 1:178,728,751...178,769,066
Ensembl chr 1:183,023,466...183,063,760 		JBrowse link
G ANO1 anoctamin 1 involved_in ISO (MGI:5461590|PMID:22634729) UniProt PMID:22634729 MGI:5461590 NCBI chr11:65,064,415...65,287,160
Ensembl chr11:68,473,555...68,576,451 		JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:21926413 RGD:5509871 NCBI chr17:4,766,616...4,777,253
Ensembl chr17:4,757,048...4,767,517 		JBrowse link
G ASIC3 acid sensing ion channel subunit 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2450005|PMID:12060708) MGI
Ensembl		 PMID:12060708 GO_REF:0000107 MGI:2450005 NCBI chr 7:142,633,357...142,639,571
Ensembl chr 7:154,786,835...154,792,289 		JBrowse link
G CALCA calcitonin related polypeptide alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3603999|PMID:16118273) MGI
Ensembl		 PMID:16118273 GO_REF:0000107 MGI:3603999 NCBI chr11:15,055,897...15,061,539
Ensembl chr11:14,745,588...14,751,267 		JBrowse link
G COMT catechol-O-methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4821693|PMID:20561508) MGI
Ensembl		 PMID:20561508 GO_REF:0000107 MGI:4821693 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO RGD PMID:27760212 RGD:12910551 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G DISC1 DISC1 scaffold protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4821693|PMID:20561508) MGI
Ensembl		 PMID:20561508 GO_REF:0000107 MGI:4821693 NCBI chr 1:207,180,513...207,594,684
Ensembl chr 1:212,265,520...212,612,079 		JBrowse link
G EPHB1 EPH receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802 		JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO RGD PMID:20531396 RGD:7257680 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826 		JBrowse link
G LOC100973863 pro-neuregulin-1, membrane-bound isoform acts_upstream_of_or_within ISO (MGI:4821693|PMID:20561508) MGI PMID:20561508 MGI:4821693 NCBI chr 8:30,954,852...32,084,411
Ensembl chr 8:29,050,222...29,263,977 		JBrowse link
G LXN latexin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3619806|PMID:16469302) MGI
Ensembl		 PMID:16469302 GO_REF:0000107 MGI:3619806 NCBI chr 3:155,692,283...155,698,605
Ensembl chr 3:163,743,319...163,749,614 		JBrowse link
G MMP24 matrix metallopeptidase 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:31,554,770...31,606,348
Ensembl chr20:32,686,887...32,729,403 		JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chr19:16,719,444...16,733,006 JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:20351485 RGD:5684352 Ensembl chr 1:136,007,476...136,047,355 JBrowse link
G NTSR1 neurotensin receptor 1 ISO RGD PMID:15733655 RGD:9743979 NCBI chr20:59,100,110...59,151,563
Ensembl chr20:60,392,736...60,446,056 		JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:17179954 RGD:9835416 NCBI chr12:77,114,282...77,224,116
Ensembl chr12:79,969,517...80,070,796 		JBrowse link
G PRDM12 PR/SET domain 12 acts_upstream_of_or_within ISO (PMID:26005867) MGI PMID:26005867 NCBI chr 9:101,786,052...101,803,287 JBrowse link
G SCN10A sodium voltage-gated channel alpha subunit 10 involved_in ISO (MGI:4429745|PMID:19931571)
(MGI:5648148|PMID:25101983)		 MGI PMID:19931571 PMID:25101983 MGI:4429745 MGI:5648148 NCBI chr 3:38,593,765...38,691,172
Ensembl chr 3:38,876,068...38,972,247 		JBrowse link
G SCN11A sodium voltage-gated channel alpha subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,741,485...38,948,400
Ensembl chr 3:39,024,921...39,128,015 		JBrowse link
G SCN9A sodium voltage-gated channel alpha subunit 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:53,468,290...53,643,747
Ensembl chr2B:170,944,974...171,054,013 		JBrowse link
G TAC1 tachykinin precursor 1 involved_in ISO (PMID:17655832) UniProt PMID:17655832 NCBI chr 7:89,675,834...89,684,391
Ensembl chr 7:103,257,501...103,266,389 		JBrowse link
G TAC4 tachykinin precursor 4 involved_in ISO (PMID:17655832) UniProt PMID:17655832 RGD:14695074 NCBI chr17:43,931,170...43,936,510
Ensembl chr17:48,655,003...48,664,586 		JBrowse link
G TLR4 toll like receptor 4 ISO RGD PMID:27760212 RGD:12910551 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711 		JBrowse link
G TRPV1 transient receptor potential cation channel subfamily V member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:3,612,781...3,658,608
Ensembl chr17:3,609,952...3,637,579 		JBrowse link
detection of temperature stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OPN4 opsin 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6407235|PMID:31924821) MGI
Ensembl		 PMID:31924821 GO_REF:0000107 MGI:6407235 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143 		JBrowse link
G RHO rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6407235|PMID:31924821) MGI
Ensembl		 PMID:31924821 GO_REF:0000107 MGI:6407235 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928 		JBrowse link
G TRPV1 transient receptor potential cation channel subfamily V member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3834285|PMID:18455988) MGI
Ensembl		 PMID:18455988 GO_REF:0000107 MGI:3834285 NCBI chr17:3,612,781...3,658,608
Ensembl chr17:3,609,952...3,637,579 		JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FECH ferrochelatase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2384247|PMID:12149233) MGI
Ensembl		 PMID:12149233 GO_REF:0000107 MGI:2384247 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378 		JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chr16:35,556,558...35,563,568
Ensembl chr16:54,662,732...54,669,745 		JBrowse link
G OPN4 opsin 4 involved_in IEA GOC GO_REF:0000108 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143 		JBrowse link
G OPN5 opsin 5 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119 		JBrowse link
detection of wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF1 forkhead box F1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3522465|PMID:12500195) MGI
Ensembl		 PMID:12500195 GO_REF:0000107 MGI:3522465 NCBI chr16:67,183,416...67,188,211
Ensembl chr16:86,516,119...86,519,949 		JBrowse link
negative regulation of detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:22187436 RGD:13514092 NCBI chr12:39,918,022...39,931,386
Ensembl chr12:40,797,293...40,811,409 		JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 acts_upstream_of_or_within ISO (MGI:3772638|PMID:11853756) MGI PMID:11853756 MGI:3772638 NCBI chr11:70,319,935...70,411,276
Ensembl chr11:73,630,276...73,654,155 		JBrowse link
G CABP4 calcium binding protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3609280|PMID:16249514) MGI
Ensembl		 PMID:16249514 GO_REF:0000107 MGI:3609280 NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758 		JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3527312|PMID:15634774) MGI
Ensembl		 PMID:15634774 GO_REF:0000107 MGI:3527312 NCBI chr16:38,160,056...38,249,474
Ensembl chr16:57,292,093...57,375,460 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) MGI
Ensembl		 PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 More... GO_REF:0000107 MGI:1928441 MGI:3609280 MGI:3615719 MGI:3757777 MGI:3772638 MGI:3778702 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936)
(MGI:6150529|PMID:29518352)		 MGI
Ensembl		 PMID:17408617 PMID:18171936 PMID:29518352 GO_REF:0000107 MGI:3761397 MGI:3772743 MGI:6150529 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
G GNGT1 G protein subunit gamma transducin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3778702|PMID:18367617) MGI
Ensembl		 PMID:18367617 GO_REF:0000107 MGI:3778702 NCBI chr 7:85,839,639...85,859,844
Ensembl chr 7:99,446,623...99,451,185 		JBrowse link
G GUCA1A guanylate cyclase activator 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI
Ensembl		 PMID:11493703 PMID:15173221 GO_REF:0000107 MGI:2664110 MGI:3584028 NCBI chr 6:41,693,593...41,774,591
Ensembl chr 6:43,045,307...43,070,520 		JBrowse link
G GUCA1B guanylate cyclase activator 1B acts_upstream_of_or_within ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028 NCBI chr 6:41,771,537...41,783,364
Ensembl chr 6:43,072,469...43,083,838 		JBrowse link
G LDB3 LIM domain binding 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:83,095,625...83,164,297
Ensembl chr10:86,654,737...86,722,148
Ensembl chr10:86,654,737...86,722,148 		JBrowse link
G LOC100981428 acid-sensing ion channel 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042539|PMID:14762118) MGI
Ensembl		 PMID:14762118 GO_REF:0000107 MGI:3042539 NCBI chr17:22,628,322...23,774,249 JBrowse link
G OPN1SW opsin 1, short wave sensitive involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:120,724,363...120,727,649
Ensembl chr 7:133,246,131...133,251,464 		JBrowse link
G OPN3 opsin 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:217,155,765...217,202,577
Ensembl chr 1:222,136,422...222,184,598 		JBrowse link
G OPN4 opsin 4 involved_in ISO
IEA		 RGD
Ensembl
UniProt		 PMID:11834834 GO_REF:0000043 GO_REF:0000107 RGD:633348 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143 		JBrowse link
G OPN5 opsin 5 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119 		JBrowse link
G RCVRN recoverin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3584028|PMID:15173221) MGI
Ensembl		 PMID:15173221 GO_REF:0000107 MGI:3584028 NCBI chr17:41,747,255...41,759,074
Ensembl chr17:46,490,605...46,502,962 		JBrowse link
G RGR retinal G protein coupled receptor involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:80,660,589...80,674,636
Ensembl chr10:84,230,385...84,246,475 		JBrowse link
G RHO rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3655007|PMID:16723493) MGI
InterPro
Ensembl
UniProt		 PMID:16723493 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:3655007 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928 		JBrowse link
G RRH retinal pigment epithelium-derived rhodopsin homolog involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:102,322,028...102,341,974
Ensembl chr 4:112,891,370...112,909,398 		JBrowse link
G SLC24A4 solute carrier family 24 member 4 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6116933|PMID:28650316) ARUK-UCL
Ensembl		 PMID:28650316 GO_REF:0000107 MGI:6116933 NCBI chr14:72,956,230...73,128,851
Ensembl chr14:92,299,507...92,468,939 		JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119 		JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3054118|PMID:15365173) MGI
Ensembl		 PMID:15365173 GO_REF:0000107 MGI:3054118 NCBI chr17:6,463,812...6,473,636
Ensembl chr17:6,450,420...6,461,868 		JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chr11:58,261,476...58,274,685
Ensembl chr11:61,614,818...61,616,200 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G PDE6C phosphodiesterase 6C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3655007|PMID:16723493) MGI
Ensembl		 PMID:16723493 GO_REF:0000107 MGI:3655007 NCBI chr10:90,361,003...90,414,169
Ensembl chr10:93,871,704...93,924,654 		JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928 		JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3054118|PMID:15365173)
(MGI:3054134|PMID:15365178)		 MGI
Ensembl		 PMID:15365173 PMID:15365178 GO_REF:0000107 MGI:3054118 MGI:3054134 NCBI chr17:6,463,812...6,473,636
Ensembl chr17:6,450,420...6,461,868 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr13:94,816,045...94,838,509
Ensembl chr13:113,867,002...113,885,610 		JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAT1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chr10:83,082,351...83,095,161
Ensembl chr10:86,641,746...86,653,143 		JBrowse link
G PCP2 Purkinje cell protein 2 acts_upstream_of_or_within ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chr19:6,921,350...6,923,618
Ensembl chr19:7,776,331...7,779,241 		JBrowse link
G RHO rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15680
    response to stimulus 8070
      detection of stimulus 532
        detection of external stimulus 137
          detection of gravity + 2
          detection of humidity + 0
          detection of light stimulus + 50
          detection of mechanical stimulus + 66
          detection of temperature stimulus + 33
          detection of wounding + 1
paths to the root