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ONTOLOGY REPORT - ANNOTATIONS


Term:detection of external stimulus
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Accession:GO:0009581 term browser browse the term
Definition:The series of events in which an external stimulus is received by a cell and converted into a molecular signal.
Synonyms:related_synonym: perception of external stimulus



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absorption of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO MGI:3586379 (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252
JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within ISO MGI:3056058 (MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:3055638 NCBI chr  X:33,963,657...33,992,115
Ensembl chr  X:33,963,657...33,992,115
JBrowse link
detection of cold stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grik2 glutamate ionotropic receptor kainate type subunit 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6414684|PMID:31474366)
UniProt
RGD
PMID:31474366 GO_REF:0000024 MGI:6414684 NCBI chr20:52,135,325...52,833,061
Ensembl chr20:52,133,851...52,838,375
JBrowse link
detection of gravity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nox3 NADPH oxidase 3 acts_upstream_of_or_within ISO MGI:1856606 (MGI:1351720|PMID:10491954) RGD PMID:10491954 MGI:1351720 NCBI chr 1:44,238,012...44,302,851
Ensembl chr 1:44,236,992...44,302,851
JBrowse link
G Otop1 otopetrin 1 acts_upstream_of_or_within ISO MGI:1856638|MGI:2655558 (MGI:2654297|PMID:12651873) RGD PMID:12651873 MGI:2654297 NCBI chr14:72,505,036...72,532,497
Ensembl chr14:72,503,592...72,532,497
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B acts_upstream_of_or_within ISO MGI:1856373 (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO MGI:2181812 (MGI:2155023|PMID:11747369) RGD PMID:11747369 MGI:2155023 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223
JBrowse link
G Best1 bestrophin 1 acts_upstream_of_or_within ISO MGI:3795281 (MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:3795256 NCBI chr 1:206,629,340...206,646,085
Ensembl chr 1:206,629,500...206,646,063
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) RGD PMID:7571473 NCBI chr  X:14,868,096...14,896,413
Ensembl chr  X:14,868,024...14,896,413
JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) RGD PMID:17033974 NCBI chr 4:152,408,657...152,524,614
Ensembl chr 4:152,408,657...152,521,268
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO MGI:1856936 (MGI:3795256|PMID:16636205) RGD PMID:16636205 MGI:3795256 NCBI chr 3:36,906,771...37,169,191
Ensembl chr 3:36,910,427...37,168,944
JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:5141557 NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023
JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (MGI:6317055|PMID:30998843) RGD PMID:30998843 MGI:6317055 NCBI chr 3:144,470,946...144,516,125
Ensembl chr 3:144,471,214...144,516,125
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173
JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:5315300|PMID:22447858) RGD PMID:22447858 MGI:5315300 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within ISO MGI:3043946 (MGI:3654563|PMID:16820008) RGD PMID:16820008 MGI:3654563 NCBI chr 5:46,994,964...47,002,902
Ensembl chr 5:46,992,946...46,996,570
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:17584859)
MGI:2152779 (MGI:3772743|PMID:18171936)
RGD PMID:17584859 PMID:18171936 MGI:3772743 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12077706)
MGI:3588845 (MGI:3714271|PMID:17065522)
RGD PMID:12077706 PMID:17065522 MGI:3714271 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866
JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:17405131)
UniProt
RGD
PMID:17405131 GO_REF:0000024 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717
JBrowse link
G Gucy2f guanylate cyclase 2F involved_in ISO (MGI:3708225|PMID:17255100) RGD PMID:17255100 MGI:3708225 NCBI chr  X:105,710,356...105,808,183
Ensembl chr  X:105,710,356...105,808,183
JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within ISO MGI:1856523|MGI:6367783|MGI:6367794|MGI:97998 (MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485) RGD PMID:26420485 PMID:28053051 MGI:5905515 MGI:6305433 NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454
JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO MGI:2445721 (MGI:3687059|PMID:12484775) RGD PMID:12484775 MGI:3687059 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO
ISS
(PMID:27889058)
GO_REF:0000024
RGD
UniProt
PMID:27889058 GO_REF:0000024 NCBI chr 7:9,373,927...9,380,845
Ensembl chr 7:9,373,927...9,380,597
JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3028628 (MGI:3027216|PMID:14625292)
PMID:21873635
RGD PMID:14625292 PMID:21873635 MGI:3027216, RGD:13792537 NCBI chr 1:88,249,438...88,250,151
Ensembl chr 1:88,249,438...88,250,151
JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO MGI:102791 (MGI:5905515|PMID:28053051) RGD PMID:28053051 MGI:5905515 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403
JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) RGD PMID:21521437 NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO MGI:107555 (MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:5140622 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO MGI:107556 (MGI:5140622|PMID:21835343) RGD PMID:21835343 MGI:5140622 NCBI chr11:65,102,031...65,225,456
Ensembl chr11:65,102,031...65,225,311
JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) RGD PMID:15557452 NCBI chr20:6,412,170...6,424,312
Ensembl chr20:6,412,171...6,424,073
JBrowse link
detection of mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 IMP RGD PMID:23872594 RGD:9681745 NCBI chr 3:97,235,671...97,550,090
Ensembl chr 3:97,238,354...97,550,154
JBrowse link
G Jup junction plakoglobin involved_in ISO (PMID:18937352) RGD PMID:18937352 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:4833892|PMID:20813920)
RGD PMID:20813920 PMID:21873635 MGI:4833892, RGD:13792537 NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501
JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:56,468,449...56,844,984
Ensembl chr18:56,469,680...56,844,216
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:1857562 (MGI:2449360|PMID:12514735), (MGI:3512725|PMID:15545994) RGD PMID:12514735 PMID:15545994 MGI:2449360 MGI:3512725 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498
JBrowse link
G Pkd1l2 polycystin 1 like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:45,049,713...45,136,503
Ensembl chr19:45,049,719...45,135,532
JBrowse link
G Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,585,564...37,650,083
Ensembl chr19:37,585,725...37,650,155
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2449360|PMID:12514735)
RGD PMID:12514735 PMID:21873635 MGI:2449360, RGD:13792537 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,032,853...243,070,031
Ensembl chr 1:243,032,913...243,070,031
JBrowse link
G Pkd2l2 polycystin 2 like 2, transient receptor potential cation channel involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:26,007,789...26,042,428
Ensembl chr18:26,007,797...26,042,428
JBrowse link
G Pkdrej polycystin family receptor for egg jelly involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:116,909,094...116,915,468
Ensembl chr 7:116,909,094...116,915,468
JBrowse link
detection of mechanical stimulus involved in equilibrioception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:1856394 (MGI:3616414|PMID:16481439) RGD PMID:16481439 MGI:3616414 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
detection of mechanical stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180111 (MGI:2180082|PMID:11069180)
Ensembl
RGD
PMID:11069180 GO_REF:0000107 MGI:2180082 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO MGI:2429689 (MGI:2155574|PMID:11754838) RGD PMID:11754838 MGI:2155574 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
G Fmr1 FMRP translational regulator 1 IEP RGD PMID:12591163 RGD:11570504 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Igf1 insulin-like growth factor 1 IMP RGD PMID:21037532 RGD:8549460 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 involved_in ISO (MGI:5574426|PMID:24717433) RGD PMID:24717433 MGI:5574426 NCBI chr18:56,468,449...56,844,984
Ensembl chr18:56,469,680...56,844,216
JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2387774 (MGI:3521551|PMID:15509762)
Ensembl
RGD
PMID:15509762 GO_REF:0000107 MGI:3521551 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
JBrowse link
detection of mechanical stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1 NOT|involved_in ISO (MGI:5461590|PMID:22634729) RGD PMID:22634729 MGI:5461590 NCBI chr 1:199,751,439...199,900,099
Ensembl chr 1:199,751,439...199,900,069
JBrowse link
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO MGI:2429689|MGI:2451051 (MGI:2155574|PMID:11754838), (MGI:2450005|PMID:12060708) RGD PMID:11754838 PMID:12060708 MGI:2155574 MGI:2450005 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
G Bace1 beta-secretase 1 IMP RGD PMID:28012171 RGD:13782150 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IMP RGD PMID:22187436 RGD:13514092 NCBI chr 7:129,784,799...129,797,074
Ensembl chr 7:129,783,674...129,797,074
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:27760212 PMID:28108674 RGD:12910551, RGD:13463594 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO MGI:1930480 (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A NOT|acts_upstream_of_or_within ISO MGI:1928285 (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D NOT|acts_upstream_of_or_within ISO MGI:1928298 (MGI:3604261|PMID:16190898) RGD PMID:16190898 MGI:3604261 NCBI chr 1:96,306,871...96,346,994
Ensembl chr 1:96,308,365...96,344,793
JBrowse link
G Grm8 glutamate metabotropic receptor 8 IDA RGD PMID:18533199 RGD:6771181 NCBI chr 4:55,805,762...56,731,690
Ensembl chr 4:55,805,955...56,730,831
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:20531396 RGD:7257680 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IDA RGD PMID:21843960 RGD:6482179 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Il18 interleukin 18 IDA RGD PMID:19853379 RGD:2315887 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:18234883 RGD:2303705 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5494919|PMID:23473320)
UniProt
RGD
PMID:23473320 GO_REF:0000024 MGI:5494919 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Mir15b microRNA 15b IDA RGD PMID:28012171 RGD:13782150 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
JBrowse link
G Mir338 microRNA 338 IMP RGD PMID:28108674 RGD:13463594 NCBI chr10:105,297,923...105,297,988 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:20351485 RGD:5684352 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:21238854 RGD:9835398 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Phf24 PHD finger protein 24 acts_upstream_of_or_within ISO MGI:5706936 (MGI:5616490|PMID:25242222) RGD PMID:25242222 MGI:5616490 NCBI chr 5:57,143,428...57,171,054
Ensembl chr 5:57,142,632...57,168,497
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5796061|PMID:27281198)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:27281198 GO_REF:0000024 GO_REF:0000107 MGI:5796061 NCBI chr 3:50,952,790...51,071,804
Ensembl chr 3:50,952,791...51,071,699
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tmem120a transmembrane protein 120A involved_in ISS
ISO
GO_REF:0000024
(MGI:6414708|PMID:32084332)
UniProt
RGD
PMID:32084332 GO_REF:0000024 MGI:6414708 NCBI chr12:20,942,243...20,950,908
Ensembl chr12:20,942,439...20,990,316
JBrowse link
G Tnf tumor necrosis factor IMP RGD PMID:16675114 RGD:7387300 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3624810 (MGI:3623714|PMID:16630838)
Ensembl
RGD
PMID:16630838 GO_REF:0000107 MGI:3623714 NCBI chr 5:4,379,999...4,433,243
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
detection of mechanical stimulus involved in sensory perception of sound term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 acts_upstream_of_or_within ISO MGI:3046273 (MGI:3629345|PMID:16775142) RGD PMID:16775142 MGI:3629345 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (MGI:3625390|PMID:16529873) RGD PMID:16529873 MGI:3625390 NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit acts_upstream_of_or_within ISO MGI:3774038 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr 1:156,487,279...156,494,277
Ensembl chr 1:156,487,279...156,491,476
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit acts_upstream_of_or_within ISO MGI:2158742 (MGI:3771935|PMID:18077337) RGD PMID:18077337 MGI:3771935 NCBI chr14:42,235,218...42,241,939
Ensembl chr14:42,235,226...42,242,192
JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in ISO (PMID:10889003) RGD PMID:10889003 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Hpn hepsin involved_in ISS
ISO
GO_REF:0000024
(MGI:3719967|PMID:17620368), (MGI:5306554|PMID:20683358), (MGI:5308539|PMID:17918732)
UniProt
RGD
PMID:17620368 PMID:17918732 PMID:20683358 GO_REF:0000024 MGI:3719967 MGI:5306554 MGI:5308539 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
MGI:1931858 (MGI:3641254|PMID:15891643)
GO_REF:0000107
RGD
Ensembl
PMID:15891643 GO_REF:0000107 MGI:3641254 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase involved_in ISO (MGI:3530388|PMID:15731517) RGD PMID:15731517 MGI:3530388 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO MGI:3718054 (MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:5468200 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3608879 (MGI:3607949|PMID:16170314) RGD PMID:16170314 MGI:3607949 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:2178233|MGI:2386570 (MGI:3712581|PMID:17523175) RGD PMID:17523175 MGI:3712581 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO MGI:5697806 (MGI:4950645|PMID:21427143)
MGI:1856394 (MGI:3616414|PMID:16481439)
RGD PMID:16481439 PMID:21427143 MGI:3616414 MGI:4950645 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO MGI:4433578 (MGI:5565635|PMID:24334608) RGD PMID:24334608 MGI:5565635 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pjvk pejvakin acts_upstream_of_or_within ISO MGI:3686985|MGI:5925280 (MGI:5907777|PMID:28089576) RGD PMID:28089576 MGI:5907777 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2679316 (MGI:5315778|PMID:22357859)
Ensembl
RGD
PMID:22357859 GO_REF:0000107 MGI:5315778 NCBI chr 7:42,837,109...43,016,917
Ensembl chr 7:42,837,109...43,016,917
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024 MGI:6193260 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO MGI:1935144 (MGI:3625390|PMID:16529873) RGD PMID:16529873 MGI:3625390 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2447995 (MGI:3578496|PMID:15846349) RGD PMID:15846349 MGI:3578496 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Strc stereocilin acts_upstream_of_or_within ISO MGI:3818633 (MGI:3818235|PMID:18849963) RGD PMID:18849963 MGI:3818235 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tmc1 transmembrane channel-like 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2151017|MGI:5427097 (MGI:5320864|PMID:22105175), (MGI:5515249|PMID:23871232)
RGD PMID:22105175 PMID:23871232 PMID:21873635 MGI:5320864 MGI:5515249, RGD:13792537 NCBI chr 1:218,275,262...218,445,955
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
G Tmc2 transmembrane channel-like 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:11850618)
MGI:2151016 (MGI:5320864|PMID:22105175)
PMID:21873635
RGD PMID:11850618 PMID:22105175 PMID:21873635 MGI:5320864, RGD:13792537 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
JBrowse link
G Whrn whirlin involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4454934|PMID:20502675)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20502675 GO_REF:0000024 GO_REF:0000107 MGI:4454934 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5494919|PMID:23473320)
UniProt
RGD
PMID:23473320 GO_REF:0000024 MGI:5494919 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3846268|PMID:19279663)
UniProt
RGD
PMID:19279663 GO_REF:0000024 MGI:3846268 NCBI chr 1:204,117,941...204,129,494
Ensembl chr 1:204,114,572...204,125,925
JBrowse link
detection of muscle stretch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in ISO (MGI:5613732|PMID:25257915) RGD PMID:25257915 MGI:5613732 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in ISO
IEA
(PMID:12507422)
GO_REF:0000107
(MGI:2447926|PMID:12507422)
RGD
Ensembl
PMID:12507422 GO_REF:0000107 MGI:2447926 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Tcap titin-cap involved_in ISO
IBA
(PMID:12507422)
PMID:21873635
RGD PMID:12507422 PMID:21873635 RGD:13792537 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Ttn titin acts_upstream_of_or_within ISO (PMID:18765796) RGD PMID:18765796 NCBI chr 3:61,652,432...61,924,912 JBrowse link
detection of temperature stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano3 anoctamin 3 IMP RGD PMID:23872594 RGD:9681745 NCBI chr 3:97,235,671...97,550,090
Ensembl chr 3:97,238,354...97,550,154
JBrowse link
G Drgx dorsal root ganglia homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2182636 (MGI:2137781|PMID:11498051)
Ensembl
RGD
PMID:11498051 GO_REF:0000107 MGI:2137781 NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600
JBrowse link
G Ngfr nerve growth factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857226 (MGI:1098517|PMID:1317267)
Ensembl
RGD
PMID:1317267 GO_REF:0000107 MGI:1098517 NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
JBrowse link
G Trpm3 transient receptor potential cation channel, subfamily M, member 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:219,673,200...220,557,610
Ensembl chr 1:219,672,892...220,560,717
JBrowse link
G Trpm8 transient receptor potential cation channel, subfamily M, member 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:88,897,039...88,990,167
Ensembl chr 9:88,903,880...88,988,552
JBrowse link
detection of temperature stimulus involved in sensory perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO MGI:2429689 (MGI:2155574|PMID:11754838) RGD PMID:11754838 MGI:2155574 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
detection of temperature stimulus involved in sensory perception of pain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:20065990 RGD:5129094 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Ano1 anoctamin 1 involved_in ISO UniProtKB:Q704Y3 (MGI:5461590|PMID:22634729) RGD PMID:22634729 MGI:5461590 NCBI chr 1:199,751,439...199,900,099
Ensembl chr 1:199,751,439...199,900,069
JBrowse link
G Arrb2 arrestin, beta 2 IMP RGD PMID:21926413 RGD:5509871 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Asic3 acid sensing ion channel subunit 3 acts_upstream_of_or_within ISO MGI:2451051 (MGI:2450005|PMID:12060708) RGD PMID:12060708 MGI:2450005 NCBI chr 4:10,760,509...10,764,987
Ensembl chr 4:10,760,597...10,764,643
JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of_or_within ISO (MGI:3603999|PMID:16118273) RGD PMID:16118273 MGI:3603999 NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5294537|PMID:19025592)
UniProt
RGD
PMID:19025592 GO_REF:0000024 MGI:5294537 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:20531396 RGD:7257680 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Lxn latexin acts_upstream_of_or_within ISO MGI:3622076 (MGI:3619806|PMID:16469302) RGD PMID:16469302 MGI:3619806 NCBI chr 2:151,727,556...151,733,426
Ensembl chr 2:151,727,102...151,733,460
JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4361769|PMID:19805319)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19805319 GO_REF:0000024 GO_REF:0000107 MGI:4361769 NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574037 (MGI:3530176|PMID:15741322)
Ensembl
RGD
PMID:15741322 GO_REF:0000107 MGI:3530176 NCBI chr16:18,046,012...18,053,914
Ensembl chr16:18,046,013...18,053,459
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IMP RGD PMID:20351485 RGD:5684352 NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:15733655 RGD:9743979 NCBI chr 3:167,606,215...167,656,377
Ensembl chr 3:167,606,215...167,656,377
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:17179954 RGD:9835416 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Prdm12 PR/SET domain 12 acts_upstream_of_or_within ISO (PMID:26005867) RGD PMID:26005867 NCBI chr 3:14,928,651...14,943,341
Ensembl chr 3:14,928,628...14,943,331
JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:17655832) RGD PMID:17655832 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tac4 tachykinin precursor 4 involved_in ISO
IDA
(PMID:17655832) RGD PMID:17655832 PMID:17655832 RGD:14695074 NCBI chr10:80,207,824...80,216,156
Ensembl chr10:80,207,610...80,216,156
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:27760212 RGD:12910551 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 involved_in ISO UniProtKB:Q8BHY3 (MGI:5461590|PMID:22634729) RGD PMID:22634729 MGI:5461590 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
detection of temperature stimulus involved in thermoception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn4 opsin 4 acts_upstream_of_or_within ISO MGI:97914 (MGI:6407235|PMID:31924821) RGD PMID:31924821 MGI:6407235 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1353425 (MGI:6407235|PMID:31924821)
Ensembl
RGD
PMID:31924821 GO_REF:0000107 MGI:6407235 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO (MGI:3834285|PMID:18455988) RGD PMID:18455988 MGI:3834285 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase acts_upstream_of_or_within ISO MGI:2384729 (MGI:2384247|PMID:12149233) RGD PMID:12149233 MGI:2384247 NCBI chr18:57,945,123...57,978,327
Ensembl chr18:57,945,122...57,979,348
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr88 G-protein coupled receptor 88 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:204,191,443...204,199,576
Ensembl chr 2:204,191,427...204,199,733
JBrowse link
G Irx6 iroquois homeobox 6 acts_upstream_of_or_within ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:14,330,440...14,336,403
Ensembl chr19:14,330,440...14,336,403
JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:151,905,096...151,925,322
Ensembl chr  X:151,905,096...151,925,388
JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457
JBrowse link
G Opn3 opsin 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:87,589,330...87,619,847
Ensembl chr13:87,589,333...87,619,847
JBrowse link
G Opn4 opsin 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Opn5 opsin 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
JBrowse link
G Rgr retinal G protein coupled receptor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:12,801,594...12,816,402
Ensembl chr16:12,801,594...12,816,223
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:218,362,195...218,375,202
Ensembl chr 2:218,362,200...218,374,599
JBrowse link
detection of wounding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:2179135 (MGI:3522465|PMID:12500195) RGD PMID:12500195 MGI:3522465 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
negative regulation of detection of mechanical stimulus involved in sensory perception of touch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IMP RGD PMID:22187436 RGD:13514092 NCBI chr 7:129,784,799...129,797,074
Ensembl chr 7:129,783,674...129,797,074
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 acts_upstream_of_or_within ISO MGI:2388373 (MGI:3772638|PMID:11853756) RGD PMID:11853756 MGI:3772638 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3043849 (MGI:3042539|PMID:14762118)
Ensembl
RGD
PMID:14762118 GO_REF:0000107 MGI:3042539 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:201,428,671...201,442,950
Ensembl chr 1:201,428,672...201,433,172
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO MGI:2152779 (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) RGD PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 More... MGI:1928441 MGI:3609280 MGI:3615719 MGI:3757777 MGI:3772638 MGI:3778702 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO MGI:3588845 (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) RGD PMID:17408617 PMID:18171936 MGI:3761397 MGI:3772743 NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO MGI:3783323 (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
JBrowse link
G Gpr88 G-protein coupled receptor 88 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:204,191,443...204,199,576
Ensembl chr 2:204,191,427...204,199,733
JBrowse link
G Guca1a guanylate cyclase activator 1A acts_upstream_of_or_within ISO MGI:2664159 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) RGD PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028 NCBI chr 9:13,587,695...13,598,566
Ensembl chr 9:13,588,525...13,598,565
JBrowse link
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO MGI:2664160 (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) RGD PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028 NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455
JBrowse link
G Opn1mw opsin 1, medium wave sensitive involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:151,905,096...151,925,322
Ensembl chr  X:151,905,096...151,925,388
JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA
IBA
GO_REF:0000043
PMID:21873635
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457
JBrowse link
G Opn3 opsin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,589,330...87,619,847
Ensembl chr13:87,589,333...87,619,847
JBrowse link
G Opn4 opsin 4 involved_in IDA
IBA
ISO
PMID:21873635
(MGI:2667269|PMID:12808468)
(PMID:15674244)
RGD PMID:12808468 PMID:15674244 PMID:11834834 PMID:21873635 MGI:2667269, RGD:633348, RGD:13792537 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Opn5 opsin 5 involved_in ISO
IBA
(MGI:6359287|PMID:30936473)
PMID:21873635
RGD PMID:30936473 PMID:21873635 MGI:6359287, RGD:13792537 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
JBrowse link
G Plcb4 phospholipase C, beta 4 NAS RGD PMID:7688223 RGD:633574 NCBI chr 3:122,952,965...123,322,522
Ensembl chr 3:122,953,196...123,322,392
JBrowse link
G Rcvrn recoverin acts_upstream_of_or_within ISO MGI:3584102 (MGI:3584028|PMID:15173221) RGD PMID:15173221 MGI:3584028 NCBI chr10:52,388,706...52,396,454
Ensembl chr10:52,388,706...52,396,453
JBrowse link
G Rgr retinal G protein coupled receptor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:12,801,594...12,816,402
Ensembl chr16:12,801,594...12,816,223
JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:2181812 (MGI:3655007|PMID:16723493)
Ensembl
RGD
PMID:16723493 PMID:21873635 GO_REF:0000107 MGI:3655007, RGD:13792537 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:218,362,195...218,375,202
Ensembl chr 2:218,362,200...218,374,599
JBrowse link
G Slc24a2 solute carrier family 24 member 2 acts_upstream_of ISO (MGI:6116933|PMID:28650316) RGD PMID:28650316 MGI:6116933 NCBI chr 5:101,499,536...101,739,337
Ensembl chr 5:101,502,278...101,739,337
JBrowse link
G Slc24a4 solute carrier family 24 member 4 acts_upstream_of
involved_in
ISO
IEA
(MGI:6116933|PMID:28650316)
GO_REF:0000107
RGD
Ensembl
PMID:28650316 GO_REF:0000107 MGI:6116933 NCBI chr 6:121,278,746...121,419,811
Ensembl chr 6:121,280,031...121,414,949
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 involved_in ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
RGD PMID:22043319 MGI:6230806 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO MGI:3054784 (MGI:3054118|PMID:15365173) RGD PMID:15365173 MGI:3054118 NCBI chr10:56,655,693...56,664,922
Ensembl chr10:56,655,693...56,664,922
JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:205,567,046...205,583,001
Ensembl chr 1:205,567,220...205,582,356
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in ISO (PMID:17584859) RGD PMID:17584859 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
JBrowse link
G Pde6c phosphodiesterase 6C acts_upstream_of_or_within ISO MGI:2657247 (MGI:3655007|PMID:16723493) RGD PMID:16723493 MGI:3655007 NCBI chr 1:235,909,473...235,965,460
Ensembl chr 1:235,909,775...235,965,315
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin IDA RGD PMID:2525480 RGD:6893558 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO MGI:3054784|MGI:3054793 (MGI:3054118|PMID:15365173), (MGI:3054134|PMID:15365178) RGD PMID:15365173 PMID:15365178 MGI:3054118 MGI:3054134 NCBI chr10:56,655,693...56,664,922
Ensembl chr10:56,655,693...56,664,922
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15946941)
UniProt
Ensembl
RGD
PMID:15946941 GO_REF:0000024 GO_REF:0000107 NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 IMP RGD PMID:11931744 RGD:1599009 NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 TAS RGD PMID:9147475 RGD:729748 NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) RGD PMID:19793992 MGI:4438311 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
JBrowse link
G Pcp2 Purkinje cell protein 2 acts_upstream_of_or_within ISO MGI:3579782 (MGI:3817370|PMID:18768681) RGD PMID:18768681 MGI:3817370 NCBI chr12:1,681,659...1,683,899
Ensembl chr12:1,681,659...1,683,899
JBrowse link
G Rho rhodopsin IDA RGD PMID:8814134 RGD:6893595 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19504
    response to stimulus 10363
      detection of stimulus 1587
        detection of external stimulus 141
          detection of gravity + 2
          detection of humidity + 0
          detection of light stimulus + 53
          detection of mechanical stimulus + 69
          detection of temperature stimulus + 28
          detection of wounding + 1
paths to the root