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ONTOLOGY REPORT - ANNOTATIONS


Term:gamma-aminobutyric acid metabolic process
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Accession:GO:0009448 term browser browse the term
Definition:The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.
Comment:See also the biological process term 'neurotransmitter metabolic process ; GO:0042133'.
Synonyms:exact_synonym: 4-aminobutanoate metabolic process;   4-aminobutanoate metabolism;   4-aminobutyrate metabolic process;   4-aminobutyrate metabolism;   GABA metabolic process;   GABA metabolism;   gamma-aminobutyric acid metabolism



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gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO (PMID:15528998) RGD PMID:15528998 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 acts_upstream_of_or_within ISO MGI:2180159 (MGI:2177837|PMID:12067239), (MGI:3629451|PMID:16647690), (MGI:3639637|PMID:16504488) RGD PMID:12067239 PMID:16504488 PMID:16647690 MGI:2177837 MGI:3629451 MGI:3639637 NCBI chr17:40,132,339...40,158,677
Ensembl chr17:40,130,883...40,158,677
JBrowse link
G Phgdh phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO MGI:3769591 (MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:3835979 NCBI chr 2:185,906,964...185,936,160
Ensembl chr 2:185,906,966...185,935,944
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:19540876 RGD:9588538 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5697738|PMID:26430123)
Ensembl
UniProt
RGD
PMID:26430123 GO_REF:0000024 GO_REF:0000107 MGI:5697738 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Gad1 glutamate decarboxylase 1 IDA RGD PMID:17712632 RGD:6480258 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333
JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1931872 (MGI:3613135|PMID:15305132)
Ensembl
RGD
PMID:15305132 GO_REF:0000107 MGI:3613135 NCBI chr 2:57,755,495...57,830,605
Ensembl chr 2:57,755,497...57,830,605
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in IBA
IC
ISO
PMID:21873635
PMID:10447691
(PMID:11561735)
RGD PMID:11561735 PMID:21873635 PMID:10447691 RGD:13792537, RGD:631980 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
TAS
GO_REF:0000024
GO_REF:0000041
(PMID:15037717), (PMID:9683595)
PMID:7814412
MGI:2180159 (MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267)
UniProt
RGD
PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267 PMID:7814412 GO_REF:0000024 GO_REF:0000041 MGI:2151301 MGI:3050939, RGD:632258 NCBI chr17:40,132,339...40,158,677
Ensembl chr17:40,130,883...40,158,677
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19504
    metabolic process 11814
      primary metabolic process 10544
        cellular amino acid metabolic process 272
          gamma-aminobutyric acid metabolic process 6
            gamma-aminobutyric acid biosynthetic process 4
            gamma-aminobutyric acid catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 19504
    cellular process 18357
      cellular metabolic process 10733
        organic acid metabolic process 1012
          oxoacid metabolic process 980
            carboxylic acid metabolic process 961
              monocarboxylic acid metabolic process 660
                gamma-aminobutyric acid metabolic process 6
                  gamma-aminobutyric acid biosynthetic process 4
                  gamma-aminobutyric acid catabolic process + 2
paths to the root