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ONTOLOGY REPORT - ANNOTATIONS


Term:gamma-aminobutyric acid metabolic process
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Accession:GO:0009448 term browser browse the term
Definition:The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.
Comment:See also the biological process term 'neurotransmitter metabolic process ; GO:0042133'.
Synonyms:exact_synonym: 4-aminobutanoate metabolic process;   4-aminobutanoate metabolism;   4-aminobutyrate metabolic process;   4-aminobutyrate metabolism;   GABA metabolic process;   GABA metabolism;   gamma-aminobutyric acid metabolism


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gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO (PMID:15528998) RGD PMID:15528998 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 ISO MGI:2180159 (MGI:2177837|PMID:12067239), (MGI:3629451|PMID:16647690), (MGI:3639637|PMID:16504488) RGD PMID:12067239, PMID:16504488, PMID:16647690 MGI:2177837, MGI:3629451, MGI:3639637 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413
JBrowse link
G Phgdh phosphoglycerate dehydrogenase ISO MGI:3769591 (MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:3835979 NCBI chr 2:200,484,245...200,513,564
Ensembl chr 2:200,484,246...200,513,564
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:19540876 RGD:9588538 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Gad1 glutamate decarboxylase 1 IDA RGD PMID:17712632 RGD:6480258 NCBI chr 3:56,861,440...56,902,139
Ensembl chr 3:56,861,396...56,902,157
JBrowse link
G Slc1a3 solute carrier family 1 member 3 IEA
ISO
GO_REF:0000107
MGI:1931872 (MGI:3613135|PMID:15305132)
Ensembl
RGD
PMID:15305132 GO_REF:0000107, MGI:3613135 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IC
ISO
IBA
PMID:10447691
(PMID:11561735)
PMID:21873635
RGD PMID:11561735, PMID:10447691, PMID:21873635 RGD:631980, RGD:13792537 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 IEA
TAS
ISS
ISO
GO_REF:0000041
PMID:7814412
GO_REF:0000024
(PMID:15037717), (PMID:9683595)
MGI:2180159 (MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267)
UniProt
RGD
PMID:9683595, PMID:11544478, PMID:15037717, PMID:15262267, PMID:7814412 GO_REF:0000024, GO_REF:0000041, MGI:2151301, MGI:3050939, RGD:632258 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      primary metabolic process 10900
        cellular amino acid metabolic process 268
          gamma-aminobutyric acid metabolic process 5
            gamma-aminobutyric acid biosynthetic process 3
            gamma-aminobutyric acid catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular metabolic process 11073
        organic acid metabolic process 1008
          oxoacid metabolic process 970
            carboxylic acid metabolic process 951
              monocarboxylic acid metabolic process 651
                gamma-aminobutyric acid metabolic process 5
                  gamma-aminobutyric acid biosynthetic process 3
                  gamma-aminobutyric acid catabolic process + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.