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ONTOLOGY REPORT - ANNOTATIONS

Term:gamma-aminobutyric acid metabolic process
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Accession:GO:0009448 term browser browse the term
Definition:The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.
Comment:See also the biological process term 'neurotransmitter metabolic process ; GO:0042133'.
Synonyms:exact_synonym: 4-aminobutanoate metabolic process;   4-aminobutanoate metabolism;   4-aminobutyrate metabolic process;   4-aminobutyrate metabolism;   GABA metabolic process;   GABA metabolism;   gamma-aminobutyric acid metabolism


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gamma-aminobutyric acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO (PMID:15528998) RGD PMID:15528998 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 acts_upstream_of_or_within ISO MGI:2180159 (MGI:2177837|PMID:12067239), (MGI:3629451|PMID:16647690), (MGI:3639637|PMID:16504488) RGD PMID:12067239 PMID:16504488 PMID:16647690 MGI:2177837 MGI:3629451 MGI:3639637 NCBI chr17:40,132,339...40,158,677
Ensembl chr17:40,130,883...40,158,677 		JBrowse link
G Phgdh phosphoglycerate dehydrogenase acts_upstream_of_or_within ISO MGI:3769591 (MGI:3835979|PMID:19114063) RGD PMID:19114063 MGI:3835979 NCBI chr 2:185,906,962...185,936,054
Ensembl chr 2:185,906,966...185,935,944 		JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:19540876 RGD:9588538 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in ISO
IEA
ISS		 (MGI:5697738|PMID:26430123)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26430123 GO_REF:0000024 GO_REF:0000107 MGI:5697738 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Gad1 glutamate decarboxylase 1 involved_in IDA
ISO
IEA
IBA		 (PMID:17384644)
GO_REF:0000107
PMID:21873635
(MGI:892697|PMID:9177246)
PMID:1924335		 RGD
Ensembl		 PMID:9177246 PMID:17384644 PMID:17712632 PMID:21873635 PMID:1924335 GO_REF:0000107 MGI:892697, RGD:6480258, RGD:13792537, RGD:728511 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333 		JBrowse link
G Gad2 glutamate decarboxylase 2 involved_in IBA
IDA		 PMID:21873635 GO_Central
RGD		 PMID:21873635 PMID:22108820 RGD:13792537, RGD:401900601 NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155 		JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1931872 (MGI:3613135|PMID:15305132)		 Ensembl
RGD		 PMID:15305132 GO_REF:0000107 MGI:3613135 NCBI chr 2:57,755,495...57,830,605
Ensembl chr 2:57,755,497...57,830,605 		JBrowse link
G Slc38a1 solute carrier family 38, member 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6795362|PMID:32668809)		 UniProt
RGD		 PMID:32668809 GO_REF:0000024 MGI:6795362 NCBI chr 7:127,733,230...127,802,541
Ensembl chr 7:127,738,226...127,802,218 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO
IBA
IC		 (PMID:11561735)
PMID:21873635
PMID:10447691		 RGD PMID:11561735 PMID:21873635 PMID:10447691 RGD:13792537, RGD:631980 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
TAS
IBA		 GO_REF:0000024
GO_REF:0000041
(PMID:15037717), (PMID:9683595)
PMID:7814412
MGI:2180159 (MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267)
PMID:21873635		 UniProt
RGD		 PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267 PMID:7814412 More... GO_REF:0000024 GO_REF:0000041 MGI:2151301 MGI:3050939, RGD:632258, RGD:13792537 NCBI chr17:40,132,339...40,158,677
Ensembl chr17:40,130,883...40,158,677 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      primary metabolic process 9986
        amino acid metabolic process 293
          gamma-aminobutyric acid metabolic process 8
            gamma-aminobutyric acid biosynthetic process 6
            gamma-aminobutyric acid catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 19553
    cellular process 18233
      cellular metabolic process 10124
        organic acid metabolic process 1070
          oxoacid metabolic process 1059
            carboxylic acid metabolic process 1044
              monocarboxylic acid metabolic process 725
                gamma-aminobutyric acid metabolic process 8
                  gamma-aminobutyric acid biosynthetic process 6
                  gamma-aminobutyric acid catabolic process + 2
paths to the root