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ONTOLOGY REPORT - ANNOTATIONS


Term:putrescine metabolic process
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Accession:GO:0009445 term browser browse the term
Definition:The chemical reactions and pathways involving putrescine, 1,4-diaminobutane; putrescine can be formed by decarboxylation of ornithine and is the metabolic precursor of spermidine and spermine.
Synonyms:exact_synonym: putrescine metabolism



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putrescine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:8144586)
UniProt
RGD
PMID:8144586 GO_REF:0000024 NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840
JBrowse link
putrescine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 involved_in ISO (PMID:12803540) RGD PMID:12803540 NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224
JBrowse link
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 IDA RGD PMID:10430362 PMID:1415709 RGD:1578320, RGD:7242912 NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440
JBrowse link
G Paox polyamine oxidase involved_in ISO (PMID:16354669) RGD PMID:16354669 NCBI chr 1:194,903,267...194,928,504
Ensembl chr 1:194,903,273...194,928,504
JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:154,043,665...154,074,278
Ensembl chr 5:154,060,151...154,074,276
JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin1 antizyme inhibitor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:69,654,773...69,681,578
Ensembl chr 7:69,654,663...69,681,578
JBrowse link
G Azin2 antizyme inhibitor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:141,281,310...141,310,415
Ensembl chr 5:141,281,249...141,310,397
JBrowse link
G Odc1 ornithine decarboxylase 1 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(MGI:5574513|PMID:24967154)
PMID:21873635
GO_REF:0000041
UniProt
RGD
PMID:24967154 PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:5574513, RGD:13792537 NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440
JBrowse link
G RGD1562036 similar to ornithine decarboxylase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:142,551,120...142,563,217
Ensembl chr 5:142,552,008...142,563,074
JBrowse link
putrescine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO
IDA
(PMID:16354669) RGD PMID:16354669 PMID:16354669 RGD:12790650 NCBI chr 1:194,903,267...194,928,504
Ensembl chr 1:194,903,273...194,928,504
JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    metabolic process 12042
      nitrogen compound metabolic process 10185
        cellular nitrogen compound metabolic process 6716
          cellular amine metabolic process 118
            cellular biogenic amine metabolic process 105
              polyamine metabolic process 19
                putrescine metabolic process 9
                  putrescine acetylation 1
                  putrescine biosynthetic process + 6
                  putrescine catabolic process 2
Path 2
Term Annotations click to browse term
  biological_process 19834
    metabolic process 12042
      organic substance metabolic process 11568
        organonitrogen compound metabolic process 6973
          amine metabolic process 128
            cellular amine metabolic process 118
              cellular biogenic amine metabolic process 105
                polyamine metabolic process 19
                  putrescine metabolic process 9
                    putrescine acetylation 1
                    putrescine biosynthetic process + 6
                    putrescine catabolic process 2
paths to the root