Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:folic acid-containing compound biosynthetic process
go back to main search page
Accession:GO:0009396 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.
Synonyms:exact_synonym: folate and derivative biosynthesis;   folate and derivative biosynthetic process;   folate-containing compound biosynthesis;   folate-containing compound biosynthetic process;   folic acid and derivative biosynthesis;   folic acid and derivative biosynthetic process;   folic acid-containing compound anabolism;   folic acid-containing compound biosynthesis;   folic acid-containing compound formation;   folic acid-containing compound synthesis;   vitamin B9 and derivative biosynthesis;   vitamin B9 and derivative biosynthetic process;   vitamin M and derivative biosynthesis;   vitamin M and derivative biosynthetic process


show annotations for term's descendants           Sort by:
folic acid-containing compound biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA		 (PMID:1881876)
GO_REF:0000107
(MGI:5503248|PMID:23704330)		 RGD
Ensembl		 PMID:1881876 PMID:23704330 GO_REF:0000107 MGI:5503248 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO (PMID:12937168) RGD PMID:12937168 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
tetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 TAS RGD PMID:14729668 RGD:1547843 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
ISO
IEA
IBA		 (PMID:2303423)
GO_REF:0000041
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:2303423 PMID:11502523 GO_REF:0000033 GO_REF:0000041, RGD:1298877 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA RGD PMID:4078017 RGD:2301990 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
tetrahydrofolylpolyglutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fpgs folylpolyglutamate synthase involved_in IEA
ISO		 GO_REF:0000041
(PMID:3619447)
(PMID:25164808)		 UniProt
RGD		 PMID:3619447 PMID:25164808 GO_REF:0000041 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      cellular metabolic process 9901
        cellular modified amino acid metabolic process 198
          cellular modified amino acid biosynthetic process 42
            folic acid-containing compound biosynthetic process 9
              dihydrofolate biosynthetic process 0
              folic acid biosynthetic process 0
              tetrahydrofolate biosynthetic process + 7
              tetrahydrofolylpolyglutamate biosynthetic process 1
Path 2
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      biosynthetic process 8450
        organic substance biosynthetic process 8385
          organonitrogen compound biosynthetic process 2154
            cellular modified amino acid biosynthetic process 42
              folic acid-containing compound biosynthetic process 9
                dihydrofolate biosynthetic process 0
                folic acid biosynthetic process 0
                tetrahydrofolate biosynthetic process + 7
                tetrahydrofolylpolyglutamate biosynthetic process 1
paths to the root