Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:2'-deoxyribonucleotide metabolic process
go back to main search page
Accession:GO:0009394 term browser browse the term
Definition:The chemical reactions and pathways involving a 2'-deoxyribonucleotide, a compound consisting of 2'-deoxyribonucleoside (a base linked to a 2'-deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: 2'-deoxyribonucleotide metabolism


show annotations for term's descendants           Sort by:
2'-deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA
IDA		 (PMID:16376858) Ensembl
ComplexPortal		 PMID:16376858 GO_REF:0000107 NCBI chr11:4,094,685...4,138,932
Ensembl chr11:4,094,707...4,138,932 		JBrowse link
G RRM2 ribonucleotide reductase regulatory subunit M2 involved_in IDA
IEA		 (PMID:16376858) ComplexPortal
Ensembl		 PMID:16376858 GO_REF:0000107 NCBI chr 2:10,122,568...10,211,010
Ensembl chr 2:10,120,698...10,211,725 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in IDA (PMID:16376858) ComplexPortal PMID:16376858 NCBI chr 8:102,204,501...102,238,961
Ensembl chr 8:102,204,502...102,238,961 		JBrowse link
dADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK5 adenylate kinase 5 involved_in TAS (PMID:10215863) PINC PMID:10215863 NCBI chr 1:77,282,019...77,559,966
Ensembl chr 1:77,282,019...77,559,966 		JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IDA (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:22,106,878...22,110,482
Ensembl chr 8:22,105,748...22,109,419 		JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252 		JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IDA (PMID:11133996) MGI PMID:11133996 NCBI chr 1:39,651,229...39,672,107
Ensembl chr 1:39,651,229...39,672,107 		JBrowse link
G PNP purine nucleoside phosphorylase involved_in IDA (PMID:6771276) MGI PMID:6771276 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,461,992...20,477,094 		JBrowse link
G UOX urate oxidase (pseudogene) involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr 1:84,364,958...84,384,801
Ensembl chr 1:84,365,428...84,397,831 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr13:27,977,717...27,988,693
Ensembl chr13:27,977,717...27,988,693 		JBrowse link
G URAHP urate (hydroxyiso-) hydrolase, pseudogene involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr16:90,039,761...90,047,783
Ensembl chr16:90,043,914...90,047,597
Ensembl chr16:90,043,914...90,047,597 		JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,321...31,414,742
Ensembl chr 2:31,334,321...31,414,742 		JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:74,151,221...74,709,290
Ensembl chr10:74,151,202...74,709,963 		JBrowse link
G DCK deoxycytidine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,993,649...71,030,914
Ensembl chr 4:70,992,538...71,030,914 		JBrowse link
G DGUOK deoxyguanosine kinase involved_in IDA (PMID:19221117) MGI PMID:19221117 NCBI chr 2:73,926,880...73,958,946
Ensembl chr 2:73,926,826...73,958,961 		JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12163459) Ensembl
MGI		 PMID:12163459 GO_REF:0000107 NCBI chr10:74,151,221...74,709,290
Ensembl chr10:74,151,202...74,709,963 		JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7731963)
(PMID:7592575)
(PMID:14607964), (PMID:9478961)
(PMID:7670465)		 Ensembl
MGI		 PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IDA (PMID:24141705) UniProt PMID:24141705 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893 		JBrowse link
dATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chr 1:33,007,940...33,036,883
Ensembl chr 1:33,007,986...33,080,996 		JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:5010295 RGD:5490216 NCBI chr 9:4,709,556...4,742,043
Ensembl chr 9:4,709,556...4,742,043 		JBrowse link
G GUK1 guanylate kinase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:4307347 GO_REF:0000107 RGD:5147877 NCBI chr 1:228,140,084...228,148,955
Ensembl chr 1:228,139,962...228,148,984 		JBrowse link
G OGA O-GlcNAcase ISO RGD PMID:17573462 RGD:2305953 NCBI chr10:101,784,450...101,818,444
Ensembl chr10:101,784,443...101,818,465 		JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,790...47,394,866 		JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:104,379,431...104,467,055
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,742
Ensembl chr17:75,130,225...75,131,757 		JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:24,495,332...24,528,390
Ensembl chr22:24,494,107...24,528,390 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,704...48,108,736
Ensembl chr 7:48,088,628...48,108,736 		JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IDA (PMID:12849978) MGI PMID:12849978 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,679...158,136,154 		JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IMP
IBA		 (PMID:24467396) UniProt
GO_Central		 PMID:24467396 GO_REF:0000033 NCBI chr16:30,423,615...30,430,030
Ensembl chr16:30,423,615...30,430,030 		JBrowse link
depyrimidination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr15:75,347,039...75,357,115
Ensembl chr15:75,346,955...75,357,115 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr12:54,158,235...54,188,985
Ensembl chr12:54,121,277...54,189,008 		JBrowse link
G TDG thymine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr12:103,965,872...103,988,874
Ensembl chr12:103,965,822...103,988,874 		JBrowse link
G UNG uracil DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 involved_in ISO
IEA
IMP		 (PMID:31201273) RGD
Ensembl
UniProt		 PMID:4307347 PMID:31201273 GO_REF:0000107 RGD:5147877 NCBI chr 1:228,140,084...228,148,955
Ensembl chr 1:228,139,962...228,148,984 		JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IDA (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:22,106,878...22,110,482
Ensembl chr 8:22,105,748...22,109,419 		JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chr 6:43,225,629...43,229,481
Ensembl chr 6:43,225,629...43,229,481 		JBrowse link
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,114,608...72,259,869
Ensembl chr 9:72,114,595...72,257,193 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,742
Ensembl chr17:75,130,225...75,131,757 		JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IDA (PMID:11133996) MGI PMID:11133996 NCBI chr 1:39,651,229...39,672,107
Ensembl chr 1:39,651,229...39,672,107 		JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chr10:103,088,017...103,193,272
Ensembl chr10:103,087,185...103,277,605 		JBrowse link
G UOX urate oxidase (pseudogene) involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr 1:84,364,958...84,384,801
Ensembl chr 1:84,365,428...84,397,831 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr13:27,977,717...27,988,693
Ensembl chr13:27,977,717...27,988,693 		JBrowse link
G URAHP urate (hydroxyiso-) hydrolase, pseudogene involved_in ISO (PMID:16462750) MGI PMID:16462750 NCBI chr16:90,039,761...90,047,783
Ensembl chr16:90,043,914...90,047,597
Ensembl chr16:90,043,914...90,047,597 		JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,321...31,414,742
Ensembl chr 2:31,334,321...31,414,742 		JBrowse link
dGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:4307347 GO_REF:0000107 RGD:5147877 NCBI chr 1:228,140,084...228,148,955
Ensembl chr 1:228,139,962...228,148,984 		JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in IDA (PMID:1659319), (PMID:9371705) UniProt PMID:1659319 PMID:9371705 NCBI chr10:103,088,017...103,193,272
Ensembl chr10:103,087,185...103,277,605 		JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IDA
IBA		 (PMID:22556419) UniProt
GO_Central		 PMID:22556419 GO_REF:0000033 NCBI chr13:48,037,726...48,052,755
Ensembl chr13:48,037,726...48,047,221 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IDA
IBA		 (PMID:24217394) UniProt
GO_Central		 PMID:24217394 GO_REF:0000033 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893 		JBrowse link
dGTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGUOK deoxyguanosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1664183), (PMID:7918681) Ensembl
MGI		 PMID:1664183 PMID:7918681 GO_REF:0000107 NCBI chr 2:73,926,880...73,958,946
Ensembl chr 2:73,926,826...73,958,961 		JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:20081199) UniProt
MGI		 PMID:20081199 GO_REF:0000024 NCBI chr 3:131,381,671...131,388,830
Ensembl chr 3:131,381,671...131,388,830 		JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:192455 GO_REF:0000033 GO_REF:0000107 RGD:5133256 NCBI chr 2:6,840,553...6,866,635
Ensembl chr 2:6,840,570...6,866,635 		JBrowse link
G DTYMK deoxythymidylate kinase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA
IDA		 (PMID:8845311)
(PMID:12614151)		 RGD
MGI
GO_Central
Ensembl
UniProt
InterPro		 PMID:220041 PMID:8845311 PMID:12614151 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:5133687 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944 		JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:182,890,091...182,917,611
Ensembl chr 4:182,890,060...182,917,936 		JBrowse link
G DUT deoxyuridine triphosphatase involved_in IDA (PMID:10952785), (PMID:15322254) MGI PMID:10952785 PMID:15322254 NCBI chr15:48,331,095...48,343,373
Ensembl chr15:48,331,011...48,343,373 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550 		JBrowse link
G TYMS thymidylate synthetase involved_in ISO
IBA
IEA
IDA		 (PMID:11278511), (PMID:15093541), (PMID:8845352) RGD
GO_Central
InterPro
Ensembl
CAFA		 PMID:8845352 PMID:9894005 PMID:11278511 PMID:15093541 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1545055 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578 		JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,742
Ensembl chr17:75,130,225...75,131,757 		JBrowse link
G TYMP thymidine phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in
NOT|involved_in		 IEA
ISO		 (PMID:15772079) Ensembl
UniProt		 PMID:15772079 GO_REF:0000107 NCBI chr 7:48,088,704...48,108,736
Ensembl chr 7:48,088,628...48,108,736 		JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:6,840,553...6,866,635
Ensembl chr 2:6,840,570...6,866,635 		JBrowse link
G DTYMK deoxythymidylate kinase involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl
UniProt		 PMID:220041 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 RGD:5133687 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944 		JBrowse link
G TBPL1 TATA-box binding protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11861477) Ensembl
MGI		 PMID:11861477 GO_REF:0000107 NCBI chr 6:133,952,174...133,990,432
Ensembl chr 6:133,952,170...133,990,432 		JBrowse link
G TYMS thymidylate synthetase involved_in IEA UniProt GO_REF:0000041 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578 		JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in IMP (PMID:24467396) UniProt PMID:24467396 NCBI chr16:30,423,615...30,430,030
Ensembl chr16:30,423,615...30,430,030 		JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chr 1:47,333,790...47,378,839
Ensembl chr 1:47,333,790...47,394,866 		JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:192455 GO_REF:0000033 GO_REF:0000107 RGD:5133256 NCBI chr 2:6,840,553...6,866,635
Ensembl chr 2:6,840,570...6,866,635 		JBrowse link
G DTYMK deoxythymidylate kinase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:241,675,747...241,686,815
Ensembl chr 2:241,675,747...241,686,944 		JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:182,890,091...182,917,611
Ensembl chr 4:182,890,060...182,917,936 		JBrowse link
G DUT deoxyuridine triphosphatase involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
InterPro		 PMID:1315924 PMID:3032103 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr15:48,331,095...48,343,373
Ensembl chr15:48,331,011...48,343,373 		JBrowse link
G LINC03106 long intergenic non-protein coding RNA 3106 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:26,066,675...26,118,408
Ensembl chr 9:26,066,675...26,118,408 		JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:97,077,743...97,921,059
Ensembl chr 1:97,077,743...97,995,000 		JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:104,379,431...104,467,055
Ensembl chr 8:104,330,324...104,467,055 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,742
Ensembl chr17:75,130,225...75,131,757 		JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12234672) Ensembl
MGI		 PMID:12234672 GO_REF:0000107 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663 		JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:24,495,332...24,528,390
Ensembl chr22:24,494,107...24,528,390 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,704...48,108,736
Ensembl chr 7:48,088,628...48,108,736 		JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase involved_in ISO
IBA
IEA		 RGD
GO_Central
UniProt
InterPro		 PMID:1315924 PMID:3032103 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr15:48,331,095...48,343,373
Ensembl chr15:48,331,011...48,343,373 		JBrowse link
G LINC03106 long intergenic non-protein coding RNA 3106 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:26,066,675...26,118,408
Ensembl chr 9:26,066,675...26,118,408 		JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IDA
IBA		 (PMID:10681516) UniProt
GO_Central		 PMID:10681516 GO_REF:0000033 NCBI chr17:75,130,228...75,131,742
Ensembl chr17:75,130,225...75,131,757 		JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in TAS
IBA		 (PMID:10899995) PINC
GO_Central		 PMID:10899995 GO_REF:0000033 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20486
    cellular process 19728
      metabolic process 13561
        carbohydrate derivative metabolic process 1090
          deoxyribonucleotide metabolic process 53
            2'-deoxyribonucleotide metabolic process 51
              2'-deoxyribonucleotide biosynthetic process + 17
              purine deoxyribonucleotide metabolic process + 23
              pyrimidine deoxyribonucleotide metabolic process + 26
Path 2
Term Annotations click to browse term
  biological_process 20486
    cellular process 19728
      metabolic process 13561
        primary metabolic process 11774
          nucleobase-containing compound metabolic process 7364
            nucleobase-containing small molecule metabolic process 760
              nucleoside phosphate metabolic process 726
                nucleotide metabolic process 570
                  deoxyribonucleotide metabolic process 53
                    2'-deoxyribonucleotide metabolic process 51
                      2'-deoxyribonucleotide biosynthetic process + 17
                      purine deoxyribonucleotide metabolic process + 23
                      pyrimidine deoxyribonucleotide metabolic process + 26
paths to the root