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ONTOLOGY REPORT - ANNOTATIONS


Term:response to radiation
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Accession:GO:0009314 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment:Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms:exact_synonym: response to electromagnetic radiation stimulus;   response to radiation stimulus


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response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan ISO RGD PMID:19480974 RGD:2315755 NCBI chrNW_004936483:14,811,152...14,846,305 JBrowse link
G Angpt2 angiopoietin 2 ISO pulsed electromagnetic field RGD PMID:15208265 RGD:2314237 NCBI chrNW_004936615:4,472,261...4,524,537 JBrowse link
G Aqp4 aquaporin 4 ISO RGD PMID:20137298 RGD:5490128 NCBI chrNW_004936550:5,931,201...5,943,999 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:26972535 RGD:13782153 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Cat catalase ISO RGD PMID:20698742 PMID:22237725 RGD:9068891 RGD:9479171 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Cckar cholecystokinin A receptor ISO RGD PMID:16472889 RGD:2313291 NCBI chrNW_004936477:3,306,898...3,314,659 JBrowse link
G Ccr4 C-C motif chemokine receptor 4 ISO RGD PMID:19084914 RGD:2306303 NCBI chrNW_004936473:23,321,167...23,323,075 JBrowse link
G Cdc25a cell division cycle 25A involved_in ISO (PMID:21376736) UniProt PMID:21376736 NCBI chrNW_004936596:1,657,411...1,680,109 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:14736764) UniProt PMID:14736764 NCBI chrNW_004936506:8,886,494...8,923,921 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO RGD PMID:19024651 RGD:2306569 NCBI chrNW_004936617:4,224,131...4,239,080 JBrowse link
G F11r F11 receptor ISO RGD PMID:20180397 RGD:7488942 NCBI chrNW_004936903:317,975...338,892 JBrowse link
G Fancg FA complementation group G acts_upstream_of_or_within ISO (MGI:2154029|PMID:11719385) MGI PMID:11719385 MGI:2154029 NCBI chrNW_004936524:3,103,912...3,110,246 JBrowse link
G Foxp3 forkhead box P3 ISO RGD PMID:30328796 RGD:38549363 NCBI chrNW_004936721:1,118,376...1,125,282 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25632565 RGD:11354959 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Igf2 insulin like growth factor 2 ISO RGD PMID:17630476 RGD:2311521 NCBI chrNW_004936816:972,902...981,232 JBrowse link
G Il18 interleukin 18 ISO RGD PMID:19955748 RGD:4889159 NCBI chrNW_004936612:2,306,963...2,325,086 JBrowse link
G Il1r1 interleukin 1 receptor type 1 ISO RGD PMID:19022353 RGD:8662898 NCBI chrNW_004936713:808,761...881,070 JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:20159792 RGD:2325788 NCBI chrNW_004936541:2,822,789...2,871,069 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:18439036 RGD:4890019 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:2668295|PMID:12833143) RGD
MGI
PMID:12833143 PMID:17252991 MGI:2668295 RGD:12910767 NCBI chrNW_004936482:17,162,854...17,238,319 JBrowse link
G Krt13 keratin 13 ISO RGD PMID:17649822 RGD:2316549 NCBI chrNW_004936490:16,419,662...16,423,949 JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 ISO RGD PMID:18302488 RGD:7257605 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G LOC101959175 amyloid beta precursor protein ISO RGD PMID:26972535 RGD:13782153 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G LOC101969640 C-reactive protein ISO RGD PMID:24308182 RGD:8695929 NCBI chrNW_004936740:885,855...888,854 JBrowse link
G Lrp5 LDL receptor related protein 5 ISO RGD PMID:22704852 RGD:7240519 NCBI chrNW_004936599:1,746,309...1,814,471 JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:19922364 RGD:2325703 NCBI chrNW_004936475:7,801,356...7,825,831 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17337891 PMID:20159792 RGD:1642044 RGD:2325788 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Ngf nerve growth factor ISO RGD PMID:19065562 RGD:2303800 NCBI chrNW_004936627:635,784...641,290 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:17535653 RGD:4892305 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:21431457 RGD:5684342 NCBI chrNW_004936580:6,002,168...6,021,690 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase involved_in ISO (PMID:17148573) UniProt PMID:17148573 NCBI chrNW_004936602:3,411,106...3,418,826 JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:22337865 RGD:9831403 NCBI chrNW_004936496:280,593...305,900 JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:22337865 RGD:9831403 NCBI chrNW_004936489:6,506,207...6,567,136 JBrowse link
G Penk proenkephalin ISO RGD PMID:8584889 RGD:9999370 NCBI chrNW_004936496:3,016,247...3,021,726 JBrowse link
G Plk3 polo like kinase 3 involved_in ISO (PMID:21376736) UniProt PMID:21376736 NCBI chrNW_004936474:26,026,878...26,032,098 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18606213 RGD:5135219 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Serpine2 serpin family E member 2 ISO RGD PMID:8373421 RGD:2317935 NCBI chrNW_004936569:5,642,328...5,668,278 JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in ISO (PMID:11877377) UniProt PMID:11877377 NCBI chrNW_004936751:332,351...388,756 JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:2668295|PMID:12833143) MGI PMID:12833143 MGI:2668295 NCBI chrNW_004936590:3,813,916...3,817,642 JBrowse link
G Sod2 superoxide dismutase 2 ISO RGD PMID:22780102 RGD:8158084 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:11774400 RGD:2302113 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO RGD PMID:11774400 RGD:2302113 NCBI chrNW_004936628:310,720...394,002 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:20458900 RGD:7394736 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a ISO RGD PMID:16752412 RGD:2302322 NCBI chrNW_004936497:2,944,841...2,986,113 JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO RGD PMID:16752412 RGD:2302322 NCBI chrNW_004936747:1,255,803...1,288,252 JBrowse link
G Trpm7 transient receptor potential cation channel subfamily M member 7 ISO RGD PMID:16201261 RGD:5685001 NCBI chrNW_004936471:12,564,617...12,666,229 JBrowse link
G Txn thioredoxin involved_in ISO (PMID:11118054), (PMID:9108029) UniProt PMID:9108029 PMID:11118054 NCBI chrNW_004936559:2,811,786...2,822,528 JBrowse link
G Vim vimentin ISO RGD PMID:17649822 RGD:2316549 NCBI chrNW_004936520:10,051,692...10,059,324 JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chrNW_004936495:11,065,946...11,082,104 JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within ISO (MGI:3055638|PMID:15326152) MGI PMID:15326152 MGI:3055638 NCBI chrNW_004936844:284,938...314,524 JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16213212), (PMID:9925639) CAFA PMID:9925639 PMID:16213212 NCBI chrNW_004936551:359,134...534,672 JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) BHF-UCL PMID:9925639 NCBI chrNW_004936540:4,074,543...4,178,859 JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chrNW_004936476:22,717,308...22,725,127 JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chrNW_004936657:2,805,947...2,848,180 JBrowse link
G Cryab crystallin alpha B acts_upstream_of_or_within ISO (PMID:23542032) MGI PMID:23542032 NCBI chrNW_004936612:2,532,851...2,536,473 JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004936498:11,115,055...11,127,215 JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:3830454|PMID:19057511) BHF-UCL PMID:19057511 MGI:3830454 NCBI chrNW_004936531:7,625,956...7,629,041 JBrowse link
G Elk1 ETS transcription factor ELK1 ISO RGD PMID:17949253 RGD:7488908 NCBI chrNW_004936502:13,402,726...13,418,214 JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO (MGI:5506835|PMID:23637614) MGI PMID:23637614 MGI:5506835 NCBI chrNW_004936489:9,983,935...9,993,179 JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004936888:375,372...378,125 JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:20470193 RGD:11354917 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chrNW_004936474:8,262,913...8,319,089 JBrowse link
G LOC101966907 histone H2AX ISO RGD PMID:17552875 RGD:8693710 NCBI chrNW_004936542:4,046,930...4,049,017 JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO RGD PMID:18640264 RGD:2317861 NCBI chrNW_004936641:1,036,967...1,044,954 JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) UniProt PMID:11836244 NCBI chrNW_004936509:3,029,942...3,203,319 JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:18640264 RGD:2317861 NCBI chrNW_004936736:230,465...394,859 JBrowse link
G Rad51 RAD51 recombinase ISO RGD PMID:9885240 RGD:9831175 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
G Rnf4 ring finger protein 4 ISO RGD PMID:22661230 RGD:9480235 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Rpl13a ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004936664:3,352,535...3,356,196 JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004936595:1,603,913...1,609,125 JBrowse link
G Tlk2 tousled like kinase 2 involved_in ISO (PMID:12660173) UniProt PMID:12660173 NCBI chrNW_004936541:3,303,563...3,422,093 JBrowse link
G Tmem109 transmembrane protein 109 acts_upstream_of_or_within ISO (PMID:23542032) MGI PMID:23542032 NCBI chrNW_004936581:2,009,357...2,019,381 JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212)
(MGI:1354114|PMID:10710310)
CAFA
MGI
PMID:10710310 PMID:16213212 MGI:1354114 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:3818783 NCBI chrNW_004936529:264,535...266,451 JBrowse link
G Tspyl5 TSPY like 5 involved_in ISO (PMID:20079711) UniProt PMID:20079711 NCBI chrNW_004936470:45,385,155...45,410,307 JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) UniProt PMID:21639834 NCBI chrNW_004936792:862,659...1,005,065 JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004936586:1,055,478...1,137,924 JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004936492:303,843...325,812 JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:18280240) UniProt PMID:18280240 NCBI chrNW_004936551:5,638,383...5,740,523 JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3583382|PMID:15980864) MGI PMID:15980864 MGI:3583382 NCBI chrNW_004936474:22,035,059...22,077,846 JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:3695811|PMID:17202487) MGI PMID:17202487 MGI:3695811 NCBI chrNW_004936661:2,652,568...2,694,039 JBrowse link
G Slc24a2 solute carrier family 24 member 2 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004936652:1,375,292...1,585,718 JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004936733:515,546...639,699 JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbc3 BCL2 binding component 3 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:23509288) UniProt PMID:23509288 NCBI chrNW_004936483:16,194,092...16,295,803 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004936476:22,717,308...22,725,127 JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936482:17,789,834...17,900,371 JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004936703:5,744...45,636 JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in ISO (PMID:8168075) UniProt PMID:8168075 NCBI chrNW_004936470:8,538,899...8,553,645 JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within ISO (MGI:5299398|PMID:21911473) MGI PMID:21911473 MGI:5299398 NCBI chrNW_004936518:855,304...873,927 JBrowse link
G Fignl1 fidgetin like 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004936686:1,412,544...1,415,939 JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004936591:3,998,359...4,001,491 JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004936594:592,760...661,369 JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936478:22,393,952...22,414,349 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) UniProt PMID:20687897 NCBI chrNW_004936471:4,374,802...4,478,894 JBrowse link
G Ints7 integrator complex subunit 7 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936557:1,389,728...1,456,397 JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chrNW_004936574:1,465,981...1,495,717 JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) MGI PMID:17916808 MGI:3842254 NCBI chrNW_004936469:18,581,855...18,650,109 JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:29463814) UniProt PMID:29463814 NCBI chrNW_004936472:3,861,833...3,867,943 JBrowse link
G LOC101967900 lysine-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chrNW_004936674:53,200...73,042 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004936476:23,237,762...23,310,211 JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:26415228 RGD:13204741 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:9780001 RGD:2316946 NCBI chrNW_004936486:16,744,607...16,923,209 JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:27681750 RGD:13781886 NCBI chrNW_004936479:17,682,070...17,716,713 JBrowse link
G Net1 neuroepithelial cell transforming 1 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004936484:9,027,515...9,056,571 JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936518:6,620,325...6,626,328 JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23509288), (PMID:23754376) UniProt PMID:23509288 PMID:23754376 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004936606:4,697,369...4,716,006 JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936599:2,348,869...2,353,907 JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936606:3,201,540...3,208,019 JBrowse link
G Rhob ras homolog family member B involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004936493:10,987,801...10,990,207 JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (MGI:5882892|PMID:16213212) CAFA PMID:16213212 MGI:5882892 NCBI chrNW_004936595:1,603,913...1,609,125 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5297784|PMID:17612497) UniProt PMID:17612497 MGI:5297784 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chrNW_004936590:3,813,916...3,817,642 JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288), (PMID:23754376) UniProt PMID:23509288 PMID:23754376 NCBI chrNW_004936590:4,921,755...5,041,573 JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004936487:15,814,463...15,822,783 JBrowse link
G Tank TRAF family member associated NFKB activator involved_in ISO (PMID:25861989) UniProt PMID:25861989 NCBI chrNW_004936469:17,665,604...17,754,845 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) RGD
MGI
PMID:17916808 PMID:25600523 MGI:3842254 RGD:11073671 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO (PMID:25749521) BHF-UCL PMID:25749521 NCBI chrNW_004936581:5,158,424...5,182,099 JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:20160708)
(MGI:5882892|PMID:16213212)
(MGI:3690827|PMID:16286009)
BHF-UCL
CAFA
MGI
PMID:16213212 PMID:16286009 PMID:20160708 MGI:3690827 MGI:5882892 NCBI chrNW_004936595:919,807...935,367 JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:3696487|PMID:17234588) MGI PMID:17234588 MGI:3696487 NCBI chrNW_004936567:6,347,661...6,559,731 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chrNW_004936500:7,998,464...8,007,848 JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:6376341|PMID:31607531) UniProt PMID:31607531 MGI:6376341 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004936602:896,730...901,480 JBrowse link
G Rp1 RP1 axonemal microtubule associated acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chrNW_004936502:5,163,164...5,212,940 JBrowse link
G Trpm1 transient receptor potential cation channel subfamily M member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19896109)
(MGI:4420740|PMID:19966281)
(MGI:4398796|PMID:19861548)
(MGI:4849309|PMID:21052544)
UniProt
MGI
PMID:19861548 PMID:19896109 PMID:19966281 PMID:21052544 MGI:4398796 MGI:4420740 MGI:4849309 NCBI chrNW_004936483:723,784...856,839 JBrowse link
cellular response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adirf adipogenesis regulatory factor involved_in ISO (PMID:23239344) UniProt PMID:23239344 NCBI chrNW_004936804:11,232...13,057 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO microwave RGD PMID:21241601 RGD:10403031 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Irs1 insulin receptor substrate 1 ISO RGD PMID:17427956 RGD:10045897 NCBI chrNW_004936525:9,064,442...9,125,972 JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983 NCBI chrNW_004936483:1,433,119...1,434,506 JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:19424603) UniProt PMID:19424603 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) BHF-UCL PMID:9925639 NCBI chrNW_004936540:4,074,543...4,178,859 JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:20959462) UniProt PMID:20959462 NCBI chrNW_004936595:1,435,601...1,437,423 JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in ISO (PMID:15901672)
(MGI:3689797|PMID:15901672)
UniProt PMID:15901672 MGI:3689797 NCBI chrNW_004936476:25,347,608...25,354,772 JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3042308|PMID:14963330) MGI PMID:14963330 MGI:3042308 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO (PMID:23629966)
(MGI:5490676|PMID:23629966)
CAFA PMID:23629966 MGI:5490676 NCBI chrNW_004936471:3,573,437...3,594,438 JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15657060) UniProt PMID:15657060 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cdc25a cell division cycle 25A involved_in ISO (PMID:19966869) UniProt PMID:19966869 NCBI chrNW_004936596:1,657,411...1,680,109 JBrowse link
G Cops9 COP9 signalosome subunit 9 involved_in ISO (PMID:26456823) UniProt PMID:26456823 NCBI chrNW_004936745:1,291,702...1,295,834 JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004936498:11,115,055...11,127,215 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:27940037) UniProt PMID:27940037 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chrNW_004936471:3,423,792...3,527,089 JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chrNW_004936495:10,746,687...10,769,304 JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004936492:696,982...778,132 JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:17055345) BHF-UCL PMID:17055345 NCBI chrNW_004936501:2,301,072...2,329,346 JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936689:2,261,163...2,449,951 JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO (MGI:5602914|PMID:24813610) UniProt PMID:24813610 MGI:5602914 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004936471:4,374,802...4,478,894 JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chrNW_004936474:8,262,913...8,319,089 JBrowse link
G LOC101957668 CREB binding protein involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004936694:552,447...663,237 JBrowse link
G Mapk13 mitogen-activated protein kinase 13 involved_in ISO (PMID:9218798) UniProt PMID:9218798 NCBI chrNW_004936476:23,212,116...23,218,726 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:8875991 RGD:2304246 NCBI chrNW_004936739:551,678...602,027 JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chrNW_004936880:646,835...661,312 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (PMID:17592138)
(MGI:3829128|PMID:17592138)
BHF-UCL PMID:17592138 MGI:3829128 NCBI chrNW_004936475:1,743,205...1,765,466 JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chrNW_004936471:17,254,777...17,374,725 JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 acts_upstream_of_or_within ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004936722:178,866...187,847 JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor involved_in ISO (PMID:20959462) UniProt PMID:20959462 NCBI chrNW_004936737:2,087,123...2,098,153 JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:19160485) CAFA PMID:19160485 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983 NCBI chrNW_004936483:1,433,119...1,434,506 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) BHF-UCL PMID:24289924 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chrNW_004936675:704,001...722,769 JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:24939902) RGD
UniProt
PMID:8905661 PMID:24939902 RGD:10448977 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004936480:1,188,408...1,273,210 JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004936889:231,373...250,985 JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chrNW_004936549:1,199,810...1,261,889 JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chrNW_004936664:2,910,609...2,914,205 JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chrNW_004936473:3,892,625...3,923,467 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptn pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chrNW_004936592:1,706,979...1,806,345 JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K involved_in ISO (PMID:16849327) UniProt PMID:16849327 NCBI chrNW_004936639:1,279,795...1,683,944 JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5430884|PMID:19358743) UniProt PMID:19358743 MGI:5430884 NCBI chrNW_004936525:8,906,848...9,028,792 JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004936606:3,201,540...3,208,019 JBrowse link
G Rnf168 ring finger protein 168 acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004936595:1,603,913...1,609,125 JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004936664:2,995,212...3,010,563 JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in ISO (PMID:27906959) UniProt PMID:27906959 NCBI chrNW_004936526:2,763,243...2,779,506 JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chrNW_004936842:448,315...452,557 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chrNW_004936596:2,274,989...2,287,288 JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212), (PMID:23629966)
(MGI:5490676|PMID:23629966)
(MGI:3042308|PMID:14963330)
CAFA
MGI
PMID:14963330 PMID:16213212 PMID:23629966 MGI:3042308 MGI:5490676 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 acts_upstream_of_or_within ISO (MGI:2153600|PMID:11557757) MGI PMID:11557757 MGI:2153600 NCBI chrNW_004936544:7,882,710...7,891,668 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5014018|PMID:20511593) MGI PMID:20511593 MGI:5014018 NCBI chrNW_004936529:264,535...266,451 JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chrNW_004936668:500,815...503,158 JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936612:742,777...804,919 JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (MGI:4839431|PMID:19966869) UniProt PMID:19966869 MGI:4839431 NCBI chrNW_004936528:6,483,898...6,596,136 JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) UniProt PMID:24657165 NCBI chrNW_004936495:8,212,136...8,238,876 JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 involved_in ISO (PMID:19800881) UniProt PMID:19800881 NCBI chrNW_004936596:2,442,978...2,467,184 JBrowse link
G Mme membrane metalloendopeptidase involved_in ISO (PMID:20876573) UniProt PMID:20876573 NCBI chrNW_004936519:2,513,896...2,595,896 JBrowse link
G Mmp1 matrix metallopeptidase 1 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936551:5,167,909...5,175,149 JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936475:7,801,356...7,825,831 JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936479:15,696,063...15,702,311 JBrowse link
G Opn3 opsin 3 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936526:8,833,495...8,876,631 JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:23220213) UniProt PMID:23220213 NCBI chrNW_004936576:5,165,815...5,179,928 JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004936502:13,345,936...13,350,170 JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in ISO (MGI:5613877|PMID:25329316) UniProt PMID:25329316 MGI:5613877 NCBI chrNW_004936476:22,717,308...22,725,127 JBrowse link
G Crip1 cysteine rich protein 1 involved_in ISO (PMID:20415737) UniProt PMID:20415737 NCBI chrNW_004936621:101,046...102,660 JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chrNW_004936529:1,838,212...1,842,399 JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chrNW_004936529:1,845,445...1,851,106 JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chrNW_004936529:1,831,639...1,837,314 JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO (PMID:22355679) BHF-UCL PMID:22355679 NCBI chrNW_004936881:369,161...372,628 JBrowse link
G Mme membrane metalloendopeptidase involved_in ISO (PMID:20876573) UniProt PMID:20876573 NCBI chrNW_004936519:2,513,896...2,595,896 JBrowse link
G Rpl13a ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004936664:3,352,535...3,356,196 JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004936487:13,056,243...13,060,900 JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:25329316)
(MGI:5613877|PMID:25329316)
UniProt PMID:25329316 MGI:5613877 NCBI chrNW_004936588:579,816...601,033 JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH9orf116 chromosome unknown C9orf116 homolog acts_upstream_of_or_within ISO (MGI:4868626|PMID:21159655) MGI PMID:21159655 MGI:4868626 NCBI chrNW_004936669:2,067,544...2,072,052 JBrowse link
G Ei24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chrNW_004936743:1,957,948...1,970,885 JBrowse link
G Impact impact RWD domain protein involved_in ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chrNW_004936550:3,765,952...3,795,183 JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:14558917 RGD:2317408 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chrNW_004936476:16,400,026...16,434,538 JBrowse link
G Poli DNA polymerase iota acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chrNW_004936497:9,490,048...9,512,475 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chrNW_004936595:919,807...935,367 JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chrNW_004936551:359,134...534,672 JBrowse link
G Ccnd2 cyclin D2 acts_upstream_of_or_within ISO (MGI:5500853|PMID:23714078) MGI PMID:23714078 MGI:5500853 NCBI chrNW_004936606:4,474,801...4,496,158 JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:23578130 RGD:10398817 NCBI chrNW_004936597:1,735,589...1,751,628 JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:15994918 RGD:9685147 NCBI chrNW_004936659:957,408...1,046,393 JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:15985650 RGD:2316135 NCBI chrNW_004936599:3,767,526...3,775,416 JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:23331620 RGD:126790570 NCBI chrNW_004936487:15,721,752...15,725,396 JBrowse link
G LOC101972117 hepcidin antimicrobial peptide ISO RGD PMID:17090718 RGD:11041722 NCBI chrNW_004936570:1,009,344...1,010,654 JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO (PMID:17468178) UniProt PMID:17468178 NCBI chrNW_004936518:4,870,686...5,041,099 JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chrNW_004936557:6,713,065...6,728,011 JBrowse link
G Prap1 proline rich acidic protein 1 involved_in ISO (MGI:6694360|PMID:32629119) UniProt PMID:32629119 MGI:6694360 NCBI chrNW_004936486:19,477,278...19,480,387 JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chrNW_004936785:1,276,478...1,320,397 JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chrNW_004936576:604,174...612,440 JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:21915754 RGD:9586753 NCBI chrNW_004936471:6,589,395...6,668,242 JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO RGD PMID:11966321 RGD:727219 NCBI chrNW_004936586:1,055,478...1,137,924 JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO RGD PMID:11175667 RGD:2317102 NCBI chrNW_004936492:303,843...325,812 JBrowse link
cone photoresponse recovery term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc24a2 solute carrier family 24 member 2 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004936652:1,375,292...1,585,718 JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004936733:515,546...639,699 JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chrNW_004936471:13,952,462...14,001,663 JBrowse link
G Rgs9 regulator of G protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chrNW_004936541:7,472,195...7,525,220 JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chrNW_004936549:7,401,532...7,465,264 JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde6b phosphodiesterase 6B acts_upstream_of_or_within ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004936477:22,418,037...22,472,251 JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004936602:896,730...901,480 JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Best1 bestrophin 1 acts_upstream_of_or_within ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chrNW_004936581:1,120,681...1,132,226 JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) UniProt PMID:7571473 NCBI chrNW_004936721:1,078,570...1,106,153 JBrowse link
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) UniProt PMID:17033974 NCBI chrNW_004936606:2,011,454...2,118,255 JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chrNW_004936469:25,494,820...25,745,783 JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (MGI:5141557|PMID:21680557) CACAO PMID:21680557 MGI:5141557 NCBI chrNW_004936473:7,027,543...7,054,079 JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chrNW_004936561:5,283,258...5,331,688 JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:5315300|PMID:22447858) MGI PMID:22447858 MGI:5315300 NCBI chrNW_004936567:6,347,661...6,559,731 JBrowse link
G Gja10 gap junction protein alpha 10 acts_upstream_of_or_within ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chrNW_004936510:2,380,114...2,395,781 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:17584859)
(MGI:3772743|PMID:18171936)
UniProt
MGI
PMID:17584859 PMID:18171936 MGI:3772743 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12077706)
(MGI:3714271|PMID:17065522)
UniProt
MGI
PMID:12077706 PMID:17065522 MGI:3714271 NCBI chrNW_004936704:1,079,255...1,093,732 JBrowse link
G Grm6 glutamate metabotropic receptor 6 involved_in ISO (PMID:17405131) UniProt PMID:17405131 NCBI chrNW_004936739:1,726,382...1,742,937 JBrowse link
G Gucy2f guanylate cyclase 2F, retinal involved_in ISO (MGI:3708225|PMID:17255100) CACAO PMID:17255100 MGI:3708225 NCBI chrNW_004936499:5,653,384...5,752,732 JBrowse link
G LOC101963575 eyes shut homolog involved_in ISO (PMID:18836446), (PMID:18976725), (PMID:20696082), (PMID:22363543) CACAO PMID:18836446 PMID:18976725 PMID:20696082 PMID:22363543 NCBI chrNW_004936476:158,391...1,289,639 JBrowse link
G LOC101970074 regulator of G protein signaling 9 binding protein acts_upstream_of_or_within ISO (MGI:3027216|PMID:14625292) MGI PMID:14625292 MGI:3027216 NCBI chrNW_004936570:3,042,233...3,043,884 JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within ISO (MGI:5905515|PMID:28053051)
(MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485)
(MGI:6305433|PMID:26420485)
MGI PMID:26420485 PMID:28053051 MGI:5905515 MGI:6305433 NCBI chrNW_004936476:17,159,756...17,174,226 JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO (MGI:3687059|PMID:12484775) MGI PMID:12484775 MGI:3687059 NCBI chrNW_004936601:1,401,215...1,410,195 JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO (PMID:27889058) UniProt PMID:27889058 NCBI chrNW_004936588:800,492...804,769 JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO (MGI:5905515|PMID:28053051) MGI PMID:28053051 MGI:5905515 NCBI chrNW_004936581:642,322...644,286 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004936591:3,347,346...3,368,062 JBrowse link
G Rpgrip1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) CACAO PMID:21521437 NCBI chrNW_004936880:440,900...511,503 JBrowse link
G Sema5a semaphorin 5A acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sema5b semaphorin 5B acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chrNW_004936725:2,229,772...2,270,458 JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004936476:23,744,707...23,757,002 JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fech ferrochelatase acts_upstream_of_or_within ISO (MGI:2384247|PMID:12149233) MGI PMID:12149233 MGI:2384247 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx6 iroquois homeobox 6 acts_upstream_of_or_within ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chrNW_004936475:7,665,100...7,672,132 JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chrNW_004936836:1,151...287,438 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5562498|PMID:23993650) MGI PMID:23993650 MGI:5562498 NCBI chrNW_004936529:264,535...266,451 JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chrNW_004936521:10,038,345...10,039,345 JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chrNW_004936577:4,316,099...4,321,193 JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chrNW_004936596:2,551,621...2,625,327 JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chrNW_004936492:7,929,138...7,994,797 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chrNW_004936562:3,133,849...3,168,472 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524) UniProt PMID:23452855 PMID:23452856 PMID:23616524 MGI:5470183 MGI:5487698 MGI:5490394 NCBI chrNW_004936511:4,259,066...4,280,501 JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G LOC101973554 F-box/LRR-repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chrNW_004936597:3,037,282...3,045,145 JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chrNW_004936621:117,785...140,917 JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chrNW_004936596:3,596,720...3,606,283 JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) UniProt PMID:26392540 PMID:30240620 PMID:31607531 MGI:5699646 MGI:6376341 MGI:6378274 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO (MGI:6378274|PMID:30240620) UniProt PMID:30240620 MGI:6378274 NCBI chrNW_004936477:22,418,037...22,472,251 JBrowse link
G Per1 period circadian regulator 1 involved_in ISO (MGI:3578039|PMID:15888647) UniProt PMID:15888647 MGI:3578039 NCBI chrNW_004936595:1,366,883...1,382,138 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004936493:3,981,364...4,002,083 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chrNW_004936558:3,631,794...3,651,754 JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chrNW_004936599:2,934,951...2,945,753 JBrowse link
G Sik1 salt inducible kinase 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chrNW_004936500:774,749...784,326 JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chrNW_004936542:4,284,243...4,310,545 JBrowse link
light adaption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chrNW_004936471:13,952,462...14,001,663 JBrowse link
G Rgs9 regulator of G protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chrNW_004936541:7,472,195...7,525,220 JBrowse link
long-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101958244 agouti related neuropeptide ISO RGD PMID:19490367 RGD:6480663 NCBI chrNW_004936475:17,927,991...17,929,377 JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004936590:4,722,914...4,887,615 JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chrNW_004936471:17,254,777...17,374,725 JBrowse link
optokinetic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chrNW_004936478:3,721,662...3,724,471 JBrowse link
G Opn4 opsin 4 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chrNW_004936804:261,210...272,449 JBrowse link
photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase ISO RGD PMID:12358739 RGD:628397 NCBI chrNW_004936594:1,556,303...1,559,198 JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18321474 RGD:2301031 NCBI chrNW_004936888:468,334...471,254 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:16962714 RGD:2293767 NCBI chrNW_004936493:4,308,683...4,327,102 JBrowse link
G Nmu neuromedin U ISO RGD PMID:17726140 RGD:1642120
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:21076970 RGD:10448986 NCBI chrNW_004936490:15,206,194...15,213,858 JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 acts_upstream_of_or_within ISO (MGI:3772638|PMID:11853756) MGI PMID:11853756 MGI:3772638 NCBI chrNW_004936498:4,089,621...4,172,749 JBrowse link
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (MGI:3042539|PMID:14762118) MGI PMID:14762118 MGI:3042539 NCBI chrNW_004936538:938,266...2,011,154 JBrowse link
G Cabp4 calcium binding protein 4 acts_upstream_of_or_within ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chrNW_004936599:2,295,124...2,299,558 JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO (MGI:3527312|PMID:15634774) MGI PMID:15634774 MGI:3527312 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) MGI PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 More... MGI:1928441 MGI:3609280 MGI:3615719 MGI:3757777 MGI:3772638 MGI:3778702 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) MGI PMID:17408617 PMID:18171936 MGI:3761397 MGI:3772743 NCBI chrNW_004936704:1,079,255...1,093,732 JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO (MGI:3778702|PMID:18367617) MGI PMID:18367617 MGI:3778702 NCBI chrNW_004936803:67,933...71,508 JBrowse link
G Guca1anb GUCA1A neighbor acts_upstream_of_or_within ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028
G Guca1b guanylate cyclase activator 1B acts_upstream_of_or_within ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028 NCBI chrNW_004936476:17,679,505...17,688,970 JBrowse link
G Opn4 opsin 4 involved_in ISO (MGI:2667269|PMID:12808468)
(PMID:15674244)
RGD
UniProt
PMID:11834834 PMID:12808468 PMID:15674244 MGI:2667269 RGD:633348 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
G Rcvrn recoverin acts_upstream_of_or_within ISO (MGI:3584028|PMID:15173221) MGI PMID:15173221 MGI:3584028 NCBI chrNW_004936595:2,873,739...2,882,150 JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004936602:896,730...901,480 JBrowse link
G Slc24a2 solute carrier family 24 member 2 acts_upstream_of ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004936652:1,375,292...1,585,718 JBrowse link
G Slc24a4 solute carrier family 24 member 4 acts_upstream_of ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004936733:515,546...639,699 JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 involved_in ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
UniProt PMID:22043319 MGI:6230806 NCBI chrNW_004936476:12,740,038...12,766,310 JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within ISO (MGI:3054118|PMID:15365173) MGI PMID:15365173 MGI:3054118 NCBI chrNW_004936677:1,539,502...1,548,343 JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004936581:387,939...400,740 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 involved_in ISO (PMID:17584859) UniProt PMID:17584859 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Pde6c phosphodiesterase 6C acts_upstream_of_or_within ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004936601:1,343,538...1,393,605 JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:16061642) UniProt PMID:16061642 NCBI chrNW_004936545:3,944,419...3,958,289 JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chrNW_004936602:896,730...901,480 JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:28007901 RGD:12879399 NCBI chrNW_004936551:359,134...534,672 JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19735555) UniProt PMID:19735555 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12080348) UniProt PMID:12080348 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within ISO (MGI:3054134|PMID:15365178)
(MGI:3054118|PMID:15365173)
MGI PMID:15365173 PMID:15365178 MGI:3054118 MGI:3054134 NCBI chrNW_004936677:1,539,502...1,548,343 JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in ISO (PMID:15946941) UniProt PMID:15946941 NCBI chrNW_004936472:152,202...165,134 JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISO (MGI:5294291|PMID:18243098) UniProt PMID:18243098 MGI:5294291 NCBI chrNW_004936743:2,004,535...2,027,287 JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004936595:1,603,913...1,609,125 JBrowse link
response to blue light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt1b carnitine palmitoyltransferase 1B involved_in ISO (MGI:6392469|PMID:32040503) UniProt PMID:32040503 MGI:6392469 NCBI chrNW_004936629:246,876...255,537 JBrowse link
G Dct dopachrome tautomerase involved_in ISO (PMID:28842328) UniProt PMID:28842328 NCBI chrNW_004936472:15,074,947...15,110,427 JBrowse link
G Kcnj10 potassium inwardly rectifying channel subfamily J member 10 ISO RGD PMID:18450590 RGD:2326038 NCBI chrNW_004936740:555,948...589,219 JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:30574656 RGD:126781752 NCBI chrNW_004936487:15,721,752...15,725,396 JBrowse link
G Opn3 opsin 3 involved_in ISO (PMID:28842328)
(MGI:6392469|PMID:32040503)
(PMID:30168605)
UniProt PMID:28842328 PMID:30168605 PMID:32040503 MGI:6392469 NCBI chrNW_004936526:8,833,495...8,876,631 JBrowse link
G Tyr tyrosinase involved_in ISO (PMID:28842328) UniProt PMID:28842328 NCBI chrNW_004936736:421,623...519,085 JBrowse link
response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chrNW_004939393:628...6,234 JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:3722566|PMID:17068116) MGI PMID:17068116 MGI:3722566 NCBI chrNW_004936476:25,347,608...25,354,772 JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3722566|PMID:17068116) MGI PMID:17068116 MGI:3722566 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1858868|PMID:10815637), (MGI:2156164|PMID:8170972), (MGI:3722566|PMID:17068116), (MGI:62849|PMID:8372353) MGI PMID:8170972 PMID:8372353 PMID:10815637 PMID:17068116 MGI:1858868 MGI:2156164 MGI:3722566 MGI:62849 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:1277623|PMID:9699678)
(MGI:87113|PMID:9126738)
MGI PMID:9126738 PMID:9699678 MGI:1277623 MGI:87113 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Casp6 caspase 6 ISO RGD PMID:10590178 RGD:2301333 NCBI chrNW_004936563:912,502...920,025 JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:17993744 RGD:2289115 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Cbl Cbl proto-oncogene ISO RGD PMID:16301331 RGD:1579837 NCBI chrNW_004936542:4,136,389...4,235,746 JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:3032464|PMID:14744935) MGI PMID:14744935 MGI:3032464 NCBI chrNW_004936657:2,805,947...2,848,180 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO RGD PMID:19084914 RGD:2306303 NCBI chrNW_004936676:60,869...63,028 JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO (PMID:18823379) UniProt PMID:18823379 NCBI chrNW_004936501:6,134,221...6,168,641 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:3054497|PMID:15340056) MGI PMID:15340056 MGI:3054497 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Fancd2 FA complementation group D2 involved_in ISO (PMID:12874027) UniProt PMID:12874027 NCBI chrNW_004936602:3,162,177...3,220,468 JBrowse link
G Gata3 GATA binding protein 3 ISO RGD PMID:19084914 RGD:2306303 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3044494|PMID:15182862) MGI PMID:15182862 MGI:3044494 NCBI chrNW_004936529:997,943...999,123 JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:16524844 RGD:2311096 NCBI chrNW_004936783:1,210,715...1,218,315 JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:16524844 RGD:2311096 NCBI chrNW_004936783:1,251,678...1,256,807 JBrowse link
G Il6r interleukin 6 receptor ISO RGD PMID:14751512 RGD:1625440 NCBI chrNW_004936580:4,055,438...4,081,876 JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993) MGI PMID:9823897 PMID:10911993 MGI:1312981 MGI:1860400 NCBI chrNW_004936472:3,861,833...3,867,943 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G Men1 menin 1 involved_in ISO (PMID:12874027) UniProt PMID:12874027 NCBI chrNW_004936599:4,504,489...4,510,085 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19179467) UniProt PMID:19179467 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:14994994 RGD:10414067 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:1306978|PMID:9806545)
(MGI:3701394|PMID:11025664)
MGI PMID:9806545 PMID:11025664 MGI:1306978 MGI:3701394 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Polb DNA polymerase beta ISO RGD PMID:12425958 RGD:8694104 NCBI chrNW_004936785:324,655...350,496 JBrowse link
G Polg DNA polymerase gamma, catalytic subunit ISO RGD PMID:12425958 RGD:8694104 NCBI chrNW_004936483:15,178,947...15,196,277 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4822286|PMID:20647423) UniProt PMID:20647423 MGI:4822286 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:1290043|PMID:9768755) MGI PMID:9768755 MGI:1290043 NCBI chrNW_004936590:4,722,914...4,887,615 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C ISO RGD PMID:17290791 RGD:1599984 NCBI chrNW_004936567:5,266,653...5,378,464 JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:14751512 PMID:16937495 RGD:1625440 RGD:2298916 NCBI chrNW_004936594:2,932,297...2,935,358 JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO (MGI:3044494|PMID:15182862) MGI PMID:15182862 MGI:3044494 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:5498602|PMID:23726973) MGI PMID:23726973 MGI:5498602 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
G Top1 DNA topoisomerase I ISO RGD PMID:2853856 RGD:2317066 NCBI chrNW_004936561:641,451...723,323 JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:7958916)
(MGI:3722566|PMID:17068116)
(MGI:3032464|PMID:14744935)
BHF-UCL
MGI
PMID:7958916 PMID:14744935 PMID:17068116 MGI:3032464 MGI:3722566 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:21333377) UniProt PMID:21333377 NCBI chrNW_004936565:2,976,681...2,989,036 JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3652689|PMID:16777961) MGI PMID:16777961 MGI:3652689 NCBI chrNW_004936527:7,760,609...7,785,360 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:1913213|PMID:9875844) MGI PMID:9875844 MGI:1913213 NCBI chrNW_004936469:2,248,367...2,495,215 JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:17854381 RGD:8547925 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Rdh13 retinol dehydrogenase 13 acts_upstream_of_or_within ISO (MGI:5462166|PMID:22605914) MGI PMID:22605914 MGI:5462166 NCBI chrNW_004936886:356,068...368,525 JBrowse link
response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO RGD PMID:17132608 RGD:1598660 NCBI chrNW_004936508:8,093,804...8,117,467 JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004936738:1,202,668...1,217,825 JBrowse link
G Aen apoptosis enhancing nuclease involved_in ISO (PMID:16171785) UniProt PMID:16171785 NCBI chrNW_004936483:14,601,671...14,611,613 JBrowse link
G Alad aminolevulinate dehydratase ISO 131Iodine RGD PMID:17916974 RGD:4144160 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
ISO (PMID:11375976), (PMID:9733515)
(MGI:1352316|PMID:10639175)
(MGI:3836659|PMID:19061978)
BHF-UCL
MGI
PMID:9733515 PMID:10639175 PMID:11375976 PMID:19061978 MGI:1352316 MGI:3836659 NCBI chrNW_004936551:359,134...534,672 JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO (PMID:19261748), (PMID:19261749) UniProt PMID:19261748 PMID:19261749 NCBI chrNW_004936596:3,574,507...3,582,370 JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO (PMID:19261748), (PMID:19261749) UniProt PMID:19261748 PMID:19261749 NCBI chrNW_004936493:4,375,393...4,863,050 JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3512739|PMID:15578100)
(MGI:1352316|PMID:10639175)
MGI PMID:10639175 PMID:15578100 MGI:1352316 MGI:3512739 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Brat1 BRCA1 associated ATM activator 1 involved_in ISO (PMID:16452482) UniProt PMID:16452482 NCBI chrNW_004936823:393,878...404,348 JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 NCBI chrNW_004936927:341,114...380,817 JBrowse link
G Brsk1 BR serine/threonine kinase 1 NOT|involved_in ISO (PMID:15150265) UniProt PMID:15150265 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Clk2 CDC like kinase 2 involved_in ISO (PMID:20682768) UniProt PMID:20682768 NCBI chrNW_004936580:4,746,276...4,758,236 JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in ISO (PMID:19805145) UniProt PMID:19805145 NCBI chrNW_004936481:12,262,415...12,437,627 JBrowse link
G CUNH10orf90 chromosome unknown C10orf90 homolog involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chrNW_004936486:14,311,976...14,499,733 JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO (MGI:2447929|PMID:12504013)
(MGI:3514096|PMID:12615897)
MGI PMID:12504013 PMID:12615897 MGI:2447929 MGI:3514096 NCBI chrNW_004936613:1,467,797...1,501,107 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004936659:520,181...565,496 JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004936493:6,963,406...7,013,256 JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chrNW_004936648:395,526...546,705 JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chrNW_004936474:12,191,391...12,295,380 JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO gamma irradiation RGD PMID:20385203 RGD:4145425 NCBI chrNW_004936659:616,570...627,172 JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004936580:3,511,364...3,553,441 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:18397884) UniProt PMID:18397884 NCBI chrNW_004936599:3,767,526...3,775,416 JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:4943978|PMID:21390131)
(MGI:1859491|PMID:10823907)
MGI PMID:10823907 PMID:21390131 MGI:1859491 MGI:4943978 NCBI chrNW_004936472:3,861,833...3,867,943 JBrowse link
G LOC101954950 aromatase ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004936471:13,107,603...13,136,910 JBrowse link
G LOC101965648 INTS3 and NABP interacting protein involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004936559:813,912...830,768 JBrowse link
G LOC101970767 steroid 17-alpha-hydroxylase/17,20 lyase ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004936600:3,097,620...3,102,713 JBrowse link
G LOC101972957 vitamin D 25-hydroxylase ISO RGD PMID:16806633 RGD:1601035 NCBI chrNW_004936528:3,881,630...3,897,613 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G Lzic leucine zipper and CTNNBIP1 domain containing ISO RGD PMID:19444910 RGD:2314410 NCBI chrNW_004936623:3,851,208...3,862,521 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004936739:926,678...955,024 JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (PMID:19805145)
(MGI:4366101|PMID:19805145)
UniProt PMID:19805145 MGI:4366101 NCBI chrNW_004936621:117,785...140,917 JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004936506:6,608,333...6,616,076 JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004936646:632,390...638,900 JBrowse link
G Nek1 NIMA related kinase 1 acts_upstream_of_or_within ISO (MGI:3522367|PMID:15604234) MGI PMID:15604234 MGI:3522367 NCBI chrNW_004936516:1,508,800...1,666,841 JBrowse link
G Nes nestin ISO RGD PMID:12445635 RGD:1642076 NCBI chrNW_004936580:5,837,949...5,847,499 JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISO (PMID:16439205) UniProt PMID:16439205 NCBI chrNW_004936569:1,494,783...1,578,587 JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:15456759) UniProt PMID:15456759 NCBI chrNW_004936527:9,440,129...9,488,215 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:5014034|PMID:20150414) MGI PMID:20150414 MGI:5014034 NCBI chrNW_004936590:4,722,914...4,887,615 JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO (MGI:3615835|PMID:16428451)
(MGI:3836659|PMID:19061978)
MGI PMID:16428451 PMID:19061978 MGI:3615835 MGI:3836659 NCBI chrNW_004936544:7,375,566...7,475,319 JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO (MGI:3615835|PMID:16428451), (MGI:5014034|PMID:20150414)
(MGI:3836659|PMID:19061978)
MGI PMID:16428451 PMID:19061978 PMID:20150414 MGI:3615835 MGI:3836659 MGI:5014034 NCBI chrNW_004936474:27,276,570...27,316,427 JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) UniProt PMID:20173098 NCBI chrNW_004936475:23,544,974...23,586,716 JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:19203578), (PMID:19203579) UniProt PMID:19203578 PMID:19203579 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:18001824), (PMID:18001825) UniProt PMID:18001824 PMID:18001825 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:19444910 RGD:2314410 NCBI chrNW_004936498:815,401...848,749 JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:8706124)
(MGI:82530|PMID:8706124)
UniProt PMID:8706124 MGI:82530 NCBI chrNW_004936842:448,315...452,557 JBrowse link
G Star steroidogenic acute regulatory protein ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (MGI:5284815|PMID:12234250) UniProt PMID:12234250 MGI:5284815 NCBI chrNW_004936588:579,816...601,033 JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:22965249 RGD:13432139 NCBI chrNW_004936490:15,441,463...15,465,692 JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:12773567) UniProt PMID:12773567 NCBI chrNW_004936529:6,788,713...6,841,824 JBrowse link
G Tp53bp2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (MGI:3624572|PMID:16702401) MGI PMID:16702401 MGI:3624572 NCBI chrNW_004936526:936,981...1,000,070 JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISO (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 NCBI chrNW_004936597:1,143,835...1,260,339 JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:16901786) UniProt PMID:16901786 NCBI chrNW_004936612:742,777...804,919 JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chrNW_004936748:785,491...802,791 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:3761960|PMID:17713479) MGI PMID:17713479 MGI:3761960 NCBI chrNW_004936469:2,248,367...2,495,215 JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950)
(MGI:5007842|PMID:21568942)
MGI PMID:15979950 PMID:21568942 MGI:3613277 MGI:5007842 NCBI chrNW_004936492:303,843...325,812 JBrowse link
response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO RGD PMID:21076359 RGD:8655612 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Cat catalase ISO RGD PMID:17514533 RGD:9107626 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Cntf ciliary neurotrophic factor ISO RGD PMID:21076359 RGD:8655612 NCBI chrNW_004936581:3,710,171...3,715,753 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chrNW_004936527:2,859,442...4,748,885 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5315031|PMID:22411800) MGI PMID:22411800 MGI:5315031 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO RGD PMID:17591908 RGD:2302146 NCBI chrNW_004936704:1,079,255...1,093,732 JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:18708127 RGD:9685740 NCBI chrNW_004936528:1,351,687...1,393,926 JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 ISO RGD PMID:18708127 RGD:9685740 NCBI chrNW_004936568:3,508,212...3,694,459 JBrowse link
response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase ISO RGD PMID:18001324 RGD:2301033 NCBI chrNW_004936594:1,556,303...1,559,198 JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) ISO transpupillary thermotherapy laser RGD PMID:16885923 RGD:2302304 NCBI chrNW_004936585:2,834,202...2,854,740 JBrowse link
G Bdnf brain derived neurotrophic factor ISO RGD PMID:17640634 RGD:8655603 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 acts_upstream_of_or_within
involved_in
ISO (PMID:15038852)
PMID:12397359
RGD
BHF-UCL
UniProt
PMID:12397359 PMID:15038852 RGD:625726 NCBI chrNW_004936577:4,316,099...4,321,193 JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10471199 RGD:10401879 NCBI chrNW_004936482:17,789,834...17,900,371 JBrowse link
G Clu clusterin ISO RGD PMID:11803476 RGD:9062370 NCBI chrNW_004936675:499,745...513,515 JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:6294193|PMID:29561690) UniProt PMID:29561690 MGI:6294193 NCBI chrNW_004936492:7,929,138...7,994,797 JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISO (PMID:15751956)
(MGI:6294193|PMID:29561690)
CAFA
UniProt
PMID:15751956 PMID:29561690 MGI:6294193 NCBI chrNW_004936562:3,133,849...3,168,472 JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:22666495 RGD:9685159 NCBI chrNW_004936659:957,408...1,046,393 JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (MGI:3639799|PMID:16715079) MGI PMID:16715079 MGI:3639799 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Dusp1 dual specificity phosphatase 1 ISO RGD PMID:15527789 RGD:2298681 NCBI chrNW_004936609:2,688,170...2,691,057 JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 ISO RGD PMID:10816553 RGD:633064 NCBI chrNW_004936561:6,118,849...6,135,001 JBrowse link
G Elk1 ETS transcription factor ELK1 ISO RGD PMID:10383826 RGD:7488912 NCBI chrNW_004936502:13,402,726...13,418,214 JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO (MGI:50545|PMID:1939658) MGI PMID:1939658 MGI:50545 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO RGD PMID:15564573 RGD:1601175 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chrNW_004936488:4,384,710...4,388,118 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chrNW_004936493:4,308,683...4,327,102 JBrowse link
G Gja10 gap junction protein alpha 10 acts_upstream_of_or_within ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chrNW_004936510:2,380,114...2,395,781 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19850826 RGD:2325946 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grk1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (MGI:1334014|PMID:10097103) RGD
MGI
PMID:3950623 PMID:10097103 MGI:1334014 RGD:1600007 NCBI chrNW_004936472:152,202...165,134 JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chrNW_004936659:1,890,786...1,892,619 JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO (MGI:5638946|PMID:25834037) MGI PMID:25834037 MGI:5638946 NCBI chrNW_004936542:3,480,071...3,566,823 JBrowse link
G LOC101969021 somatotropin ISO RGD PMID:19091612 RGD:2315626 NCBI chrNW_004936541:4,524,397...4,528,234 JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chrNW_004936896:228,908...539,836 JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004936712:1,710,513...1,717,339 JBrowse link
G Myo15a myosin XVA ISO RGD PMID:21479269 RGD:150429616 NCBI chrNW_004936741:1,669,680...1,724,929 JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO RGD PMID:17640634 RGD:8655603 NCBI chrNW_004936680:267,850...621,467 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO RGD PMID:15979612 RGD:8694099 NCBI chrNW_004936602:3,411,106...3,418,826 JBrowse link
G Opn4 opsin 4 NOT|acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Per1 period circadian regulator 1 acts_upstream_of_or_within ISO (PMID:15038852) BHF-UCL PMID:15038852 NCBI chrNW_004936595:1,366,883...1,382,138 JBrowse link
G Polg DNA polymerase gamma, catalytic subunit ISO RGD PMID:15979612 RGD:8694099 NCBI chrNW_004936483:15,178,947...15,196,277 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chrNW_004936602:1,230,907...1,368,588 JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chrNW_004936602:896,730...901,480 JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO (MGI:3692154|PMID:16221497) MGI PMID:16221497 MGI:3692154 NCBI chrNW_004936888:57,212...62,722 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:17389522 RGD:9585654 NCBI chrNW_004936591:3,347,346...3,368,062 JBrowse link
G Slc1a2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO (MGI:1203466|PMID:9539795) MGI PMID:9539795 MGI:1203466 NCBI chrNW_004936533:2,779,650...2,918,640 JBrowse link
G Slc1a3 solute carrier family 1 member 3 acts_upstream_of_or_within ISO (MGI:1203466|PMID:9539795) MGI PMID:9539795 MGI:1203466 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
G Slc4a10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (MGI:3772751|PMID:18165320) MGI PMID:18165320 MGI:3772751 NCBI chrNW_004936469:17,068,179...17,349,563 JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:8700883 RGD:632616 NCBI chrNW_004936489:4,903,176...5,177,987 JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:21185915 RGD:5128767 NCBI chrNW_004936794:478,651...486,887 JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:1683769 RGD:2326143 NCBI chrNW_004936480:18,862,288...18,882,614 JBrowse link
G Prph2 peripherin 2 ISO RGD PMID:8320859 RGD:8553226 NCBI chrNW_004936476:17,159,756...17,174,226 JBrowse link
response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15150265) UniProt
MGI
PMID:15150265 NCBI chrNW_004936886:541,831...567,197 JBrowse link
G Casp3 caspase 3 acts_upstream_of_or_within ISO (MGI:3615714|PMID:16469926)
(MGI:3691523|PMID:11092819)
MGI PMID:11092819 PMID:16469926 MGI:3615714 MGI:3691523 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp7 caspase 7 acts_upstream_of_or_within ISO (MGI:3615714|PMID:16469926) MGI PMID:16469926 MGI:3615714 NCBI chrNW_004936486:4,082,664...4,114,942 JBrowse link
G Casp9 caspase 9 acts_upstream_of_or_within ISO (MGI:3691523|PMID:11092819) MGI PMID:11092819 MGI:3691523 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cat catalase ISO RGD PMID:12592055 RGD:9179775 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) UniProt PMID:23352644 NCBI chrNW_004936555:6,341,455...6,356,677 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004936476:22,717,308...22,725,127 JBrowse link
G Cdkn2d cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) BHF-UCL PMID:15750620 NCBI chrNW_004936659:840,602...843,078 JBrowse link
G CUNH10orf90 chromosome unknown C10orf90 homolog involved_in ISO (MGI:5285148|PMID:20843368) UniProt PMID:20843368 MGI:5285148 NCBI chrNW_004936486:14,311,976...14,499,733 JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:12732143) UniProt PMID:12732143 NCBI chrNW_004936562:1,960,406...1,974,809 JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:18794347) UniProt PMID:18794347 NCBI chrNW_004936557:1,347,991...1,389,836 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (MGI:3692802|PMID:17020410) MGI PMID:17020410 MGI:3692802 NCBI chrNW_004936706:1,816,561...1,829,638 JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:17509950) UniProt PMID:17509950 NCBI chrNW_004936469:43,970,002...43,998,279 JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:16678501) UniProt PMID:16678501 NCBI chrNW_004936501:2,301,072...2,329,346 JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within
ISO (PMID:8710877)
(MGI:3041918|PMID:15082767)
(PMID:16167068)
UniProt
MGI
PMID:8710877 PMID:15082767 PMID:16167068 MGI:3041918 NCBI chrNW_004936472:8,209,482...8,234,696 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within
ISO (PMID:16916636)
(MGI:3054497|PMID:15340056), (MGI:3655576|PMID:10843671)
UniProt
MGI
PMID:10843671 PMID:15340056 PMID:16916636 MGI:3054497 MGI:3655576 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in
acts_upstream_of_or_within
ISO (PMID:7664335)
(MGI:3054497|PMID:15340056)
(PMID:12732143)
UniProt
MGI
PMID:7664335 PMID:12732143 PMID:15340056 MGI:3054497 NCBI chrNW_004936480:7,560,055...7,609,650 JBrowse link
G Hus1 HUS1 checkpoint clamp component acts_upstream_of_or_within ISO (MGI:2156961|PMID:11790307)
(MGI:2449744|PMID:12529385)
MGI PMID:11790307 PMID:12529385 MGI:2156961 MGI:2449744 NCBI chrNW_004936478:22,393,952...22,414,349 JBrowse link
G LOC101976840 cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chrNW_004936588:636,041...639,564 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in ISO (PMID:9535930) UniProt PMID:9535930 NCBI chrNW_004936588:4,882,191...4,891,807 JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 involved_in ISO (PMID:9275185) UniProt PMID:9275185 NCBI chrNW_004936508:11,885,066...12,062,560 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:14967141) MGI PMID:14967141 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
G Men1 menin 1 involved_in ISO (PMID:16690369) UniProt PMID:16690369 NCBI chrNW_004936599:4,504,489...4,510,085 JBrowse link
G Msh6 mutS homolog 6 acts_upstream_of_or_within ISO (MGI:2677657|PMID:14632208) MGI PMID:14632208 MGI:2677657 NCBI chrNW_004936508:4,708,661...4,728,671 JBrowse link
G Pclaf PCNA clamp associated factor involved_in ISO (PMID:23000965) UniProt PMID:23000965 NCBI chrNW_004936471:24,797,291...24,812,196 JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:3580934|PMID:15626733) MGI PMID:15626733 MGI:3580934 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Primpol primase and DNA directed polymerase involved_in ISO (PMID:24240614), (PMID:24267451) UniProt PMID:24240614 PMID:24267451 NCBI chrNW_004936554:4,536,246...4,571,000 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4822286|PMID:20647423) UniProt PMID:20647423 MGI:4822286 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:2448116|PMID:12509447) MGI PMID:12509447 MGI:2448116 NCBI chrNW_004936602:4,030,353...4,134,119 JBrowse link
G Rev1 REV1 DNA directed polymerase involved_in ISO (PMID:11485998) UniProt PMID:11485998 NCBI chrNW_004936661:1,322,907...1,397,990 JBrowse link
G Ro60 Ro60, Y RNA binding protein acts_upstream_of_or_within ISO (MGI:2668758|PMID:12788971)
(MGI:5524977|PMID:14680639)
MGI PMID:12788971 PMID:14680639 MGI:2668758 MGI:5524977 NCBI chrNW_004936638:1,289,452...1,320,522 JBrowse link
G Rpain RPA interacting protein acts_upstream_of_or_within ISO (PMID:16135809) MGI PMID:16135809 NCBI chrNW_004936677:2,376,666...2,384,856 JBrowse link
G Sprtn SprT-like N-terminal domain involved_in ISO (PMID:22681887), (PMID:22894931), (PMID:22902628) UniProt PMID:22681887 PMID:22894931 PMID:22902628 NCBI chrNW_004936484:19,391,685...19,402,938 JBrowse link
G Tipin TIMELESS interacting protein acts_upstream_of_or_within ISO (MGI:3706226|PMID:17141802) MGI PMID:17141802 MGI:3706226 NCBI chrNW_004936471:26,516,511...26,531,403 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:1858868|PMID:10815637), (MGI:3691523|PMID:11092819)
(MGI:2675761|PMID:12952892)
(MGI:3032464|PMID:14744935)
RGD
MGI
PMID:10815637 PMID:11092819 PMID:12952892 PMID:14744935 PMID:17724205 MGI:1858868 MGI:2675761 MGI:3032464 MGI:3691523 RGD:2290562 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Tp53i13 tumor protein p53 inducible protein 13 involved_in ISO (PMID:14767535) UniProt PMID:14767535 NCBI chrNW_004936538:5,680,048...5,683,814 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5908297|PMID:28351661) MGI PMID:28351661 MGI:5908297 NCBI chrNW_004936529:264,535...266,451 JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (MGI:5009403|PMID:16816390) BHF-UCL PMID:16816390 MGI:5009403 NCBI chrNW_004936487:5,606,690...5,619,856 JBrowse link
G Tyr tyrosinase ISO RGD PMID:6175546 RGD:8694330 NCBI chrNW_004936736:421,623...519,085 JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO (MGI:3056865|PMID:15271982) MGI PMID:15271982 MGI:3056865 NCBI chrNW_004936471:30,213,742...30,312,873 JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:1717990) UniProt PMID:1717990 NCBI chrNW_004936479:10,330,666...10,340,268 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in ISO (PMID:1717990) UniProt PMID:1717990 NCBI chrNW_004936647:891,357...913,963 JBrowse link
G Ube4b ubiquitination factor E4B involved_in ISO (PMID:11802788) UniProt PMID:11802788 NCBI chrNW_004936623:3,934,439...4,051,083 JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (MGI:3525429|PMID:15358786) BHF-UCL PMID:15358786 MGI:3525429 NCBI chrNW_004936903:352,569...359,350 JBrowse link
G Usp1 ubiquitin specific peptidase 1 involved_in ISO (PMID:18082604) UniProt PMID:18082604 NCBI chrNW_004936692:147,699...159,921 JBrowse link
G Uvssa UV stimulated scaffold protein A involved_in ISO (PMID:22466610), (PMID:22466611), (PMID:22466612) UniProt PMID:22466610 PMID:22466611 PMID:22466612 NCBI chrNW_004936477:21,918,091...21,950,895 JBrowse link
G Xpa XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (MGI:3655576|PMID:10843671) MGI PMID:10843671 MGI:3655576 NCBI chrNW_004936524:6,467,365...6,493,556 JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:22704558) UniProt PMID:22704558 NCBI chrNW_004936469:40,328,850...40,558,797 JBrowse link
response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18483258) BHF-UCL PMID:18483258 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Ccnd1 cyclin D1 involved_in ISO (PMID:18483258) BHF-UCL PMID:18483258
G Cryaa crystallin alpha A acts_upstream_of_or_within ISO (MGI:1321356|PMID:9813033) MGI PMID:9813033 MGI:1321356 NCBI chrNW_004936500:931,804...935,185 JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:18483258) BHF-UCL PMID:18483258 NCBI chrNW_004936678:365,005...560,546 JBrowse link
response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1330635|PMID:10200548) MGI PMID:10200548 MGI:1330635 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:1859141|PMID:10850428), (MGI:3699047|PMID:17145777) MGI PMID:10850428 PMID:17145777 MGI:1859141 MGI:3699047 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (MGI:3590574|PMID:12660172) MGI PMID:12660172 MGI:3590574 NCBI chrNW_004936500:3,845,320...3,852,000 JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:8992506) UniProt PMID:8992506 NCBI chrNW_004936519:6,166,060...6,180,652 JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:8992506) UniProt PMID:8992506 NCBI chrNW_004936515:4,056,214...4,066,121 JBrowse link
G Ivl involucrin involved_in ISO (PMID:16639001) UniProt PMID:16639001 NCBI chrNW_004936580:2,892,316...2,894,085 JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (MGI:3487309|PMID:15166087) MGI PMID:15166087 MGI:3487309 NCBI chrNW_004936508:4,943,987...5,013,356 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:15616591) UniProt PMID:15616591 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Tp53 tumor protein p53 ISO RGD PMID:22559303 RGD:8547754 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (MGI:3034118|PMID:15010313) MGI PMID:15010313 MGI:3034118 NCBI chrNW_004936602:118,173...139,884 JBrowse link
response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 ISO RGD PMID:19520675 RGD:2316118 NCBI chrNW_004936476:25,347,608...25,354,772 JBrowse link
G Bcl3 BCL3 transcription coactivator involved_in ISO (PMID:16384933) UniProt PMID:16384933 NCBI chrNW_004936706:1,410,848...1,427,822 JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:1203345|PMID:9660919) MGI PMID:9660919 MGI:1203345 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO (PMID:18823379) UniProt PMID:18823379 NCBI chrNW_004936501:6,134,221...6,168,641 JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:17208056) UniProt PMID:17208056 NCBI chrNW_004936472:8,209,482...8,234,696 JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (MGI:3590574|PMID:12660172) MGI PMID:12660172 MGI:3590574 NCBI chrNW_004936500:3,845,320...3,852,000 JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 involved_in ISO (PMID:9305639) UniProt PMID:9305639 NCBI chrNW_004936489:11,908,083...11,972,186 JBrowse link
G Polh DNA polymerase eta involved_in ISO (PMID:17563354) UniProt PMID:17563354 NCBI chrNW_004936476:16,400,026...16,434,538 JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:17563354) UniProt PMID:17563354 NCBI chrNW_004936792:862,659...1,005,065 JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119)
(MGI:5009388|PMID:18026119)
UniProt PMID:18026119 MGI:5009388 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO RGD PMID:9269316 RGD:2306948 NCBI chrNW_004936503:9,124,314...9,142,372 JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11309417) UniProt PMID:11309417 NCBI chrNW_004936483:16,194,092...16,295,803 JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:1100157|PMID:9398843)
(MGI:3833141|PMID:16859999)
(MGI:1203345|PMID:9660919)
MGI PMID:9398843 PMID:9660919 PMID:16859999 MGI:1100157 MGI:1203345 MGI:3833141 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 acts_upstream_of_or_within ISO (PMID:14636569) MGI PMID:14636569 NCBI chrNW_004936927:341,114...380,817 JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18239382 RGD:2293328 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Ccnd1 cyclin D1 ISO RGD PMID:17148264 RGD:1601086
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO RGD PMID:18413982 RGD:8662408 NCBI chrNW_004936476:22,717,308...22,725,127 JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO RGD PMID:17549535 RGD:8661655 NCBI chrNW_004936512:5,861,933...5,894,898 JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950) MGI PMID:15979950 MGI:3613277 NCBI chrNW_004936706:1,854,938...1,867,521 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950), (MGI:3699047|PMID:17145777) MGI PMID:15979950 PMID:17145777 MGI:3613277 MGI:3699047 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within ISO (MGI:3699047|PMID:17145777) MGI PMID:17145777 MGI:3699047 NCBI chrNW_004936480:7,560,055...7,609,650 JBrowse link
G Fga fibrinogen alpha chain ISO RGD PMID:4170424 RGD:11040910 NCBI chrNW_004936576:1,322,406...1,329,743 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:15161688 RGD:9068912 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Il7 interleukin 7 ISO RGD PMID:15799696 RGD:10402940 NCBI chrNW_004936702:110,625...162,957 JBrowse link
G Kars1 lysyl-tRNA synthetase 1 ISO RGD PMID:4001316 RGD:12910553 NCBI chrNW_004936475:24,294,699...24,312,051 JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chrNW_004936472:3,861,833...3,867,943 JBrowse link
G LOC101976500 haptoglobin ISO RGD PMID:12379430 RGD:1626377 NCBI chrNW_004936475:21,841,054...21,845,821 JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:12121845 RGD:1641839 NCBI chrNW_004936469:10,245,001...10,438,933 JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (MGI:2667543|PMID:12687013) MGI PMID:12687013 MGI:2667543 NCBI chrNW_004936508:4,943,987...5,013,356 JBrowse link
G Pdxk pyridoxal kinase ISO RGD PMID:2928487 RGD:2303016 NCBI chrNW_004936500:510,977...539,166 JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Rad51 RAD51 recombinase ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
G Thbd thrombomodulin ISO RGD PMID:12057911 RGD:634507 NCBI chrNW_004936620:2,563,900...2,568,117 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3032953|PMID:11884608)
(MGI:5440773|PMID:22821713)
RGD
MGI
PMID:11884608 PMID:17699727 PMID:22821713 MGI:3032953 MGI:5440773 RGD:2290567 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:8811296 RGD:11079207 NCBI chrNW_004936709:1,578,137...1,741,877 JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950) MGI PMID:15979950 MGI:3613277 NCBI chrNW_004936527:7,760,609...7,785,360 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within
ISO (PMID:9242410)
(MGI:1913213|PMID:9875844)
UniProt
MGI
PMID:9242410 PMID:9875844 MGI:1913213 NCBI chrNW_004936469:2,248,367...2,495,215 JBrowse link
G Xrra1 X-ray radiation resistance associated 1 involved_in ISO (PMID:12908878) UniProt PMID:12908878 NCBI chrNW_004936498:3,783,623...3,844,674 JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004936529:1,735,258...1,740,297 JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chrNW_004936804:261,210...272,449 JBrowse link
G Pcp2 Purkinje cell protein 2 acts_upstream_of_or_within ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chrNW_004936588:4,681,559...4,683,443 JBrowse link
G Rho rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chrNW_004936602:896,730...901,480 JBrowse link
short-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npy neuropeptide Y ISO RGD PMID:19490367 RGD:6480663 NCBI chrNW_004936478:1,289,437...1,296,819 JBrowse link
UV protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cat catalase involved_in ISO (PMID:16644728), (PMID:17053817) UniProt PMID:16644728 PMID:17053817 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (MGI:1342943|PMID:10454634)
(MGI:63544|PMID:8275084)
(MGI:3692264|PMID:16682947)
MGI PMID:8275084 PMID:10454634 PMID:16682947 MGI:1342943 MGI:3692264 MGI:63544 NCBI chrNW_004936706:1,854,938...1,867,521 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (MGI:1267106|PMID:9651581)
(PMID:2835663)
MGI PMID:2835663 PMID:9651581 MGI:1267106 NCBI chrNW_004936706:1,816,561...1,829,638 JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (MGI:50153|PMID:1747940) MGI PMID:1747940 MGI:50153 NCBI chrNW_004936469:43,970,002...43,998,279 JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within ISO (MGI:3027419|PMID:14729965) MGI PMID:14729965 MGI:3027419 NCBI chrNW_004936501:2,301,072...2,329,346 JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within ISO (MGI:77034|PMID:7510366)
(PMID:7510366)
(MGI:82906|PMID:8703115)
MGI PMID:7510366 PMID:8703115 MGI:77034 MGI:82906 NCBI chrNW_004936472:8,209,482...8,234,696 JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO (PMID:17097614) BHF-UCL PMID:17097614 NCBI chrNW_004936529:997,943...999,123 JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO (PMID:22355679) BHF-UCL PMID:22355679 NCBI chrNW_004936881:369,161...372,628 JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chrNW_004936737:1,889,123...1,898,303 JBrowse link
G Xpa XPA, DNA damage recognition and repair factor involved_in ISO (PMID:1601884) CAFA PMID:1601884 NCBI chrNW_004936524:6,467,365...6,493,556 JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in ISO (PMID:20855601) UniProt PMID:20855601 NCBI chrNW_004936561:2,676,515...2,701,447 JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chrNW_004936479:9,490,717...9,535,998 JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chrNW_004936581:1,710,382...1,742,598 JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chrNW_004936562:1,960,406...1,974,809 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20855601) UniProt PMID:20855601 NCBI chrNW_004936471:4,374,802...4,478,894 JBrowse link
G LOC101961805 histone H2A type 3 involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chrNW_004937135:43,069...44,926 JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO (PMID:18292087) BHF-UCL PMID:18292087 NCBI chrNW_004936641:193,885...198,730 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20670893) CACAO PMID:20670893 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:8077226)
(MGI:5427285|PMID:22431748)
CACAO
MGI
PMID:8077226 PMID:22431748 MGI:5427285 NCBI chrNW_004936602:118,173...139,884 JBrowse link
UV-damage excision repair, DNA incision term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (MGI:3697767|PMID:17049932) MGI PMID:17049932 MGI:3697767 NCBI chrNW_004936602:118,173...139,884 JBrowse link
visual behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlrb1 dynein light chain roadblock-type 1 involved_in ISO PMID:10816553 UniProt PMID:10816553 RGD:633064 NCBI chrNW_004936561:6,118,849...6,135,001 JBrowse link
G Slc1a2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO (MGI:3608234|PMID:16197522) MGI PMID:16197522 MGI:3608234 NCBI chrNW_004936533:2,779,650...2,918,640 JBrowse link
visual learning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:5774886|PMID:27030769) ARUK-UCL PMID:27030769 MGI:5774886 NCBI chrNW_004936588:460,308...477,382 JBrowse link
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:24114458 RGD:10003028 NCBI chrNW_004936528:1,608,782...1,682,873 JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:5315777|PMID:22357865) MGI PMID:22357865 MGI:5315777 NCBI chrNW_004936481:9,823,790...9,847,291 JBrowse link
G Adam2 ADAM metallopeptidase domain 2 acts_upstream_of_or_within ISO (MGI:3620328|PMID:16504143) MGI PMID:16504143 MGI:3620328 NCBI chrNW_004936675:393,160...451,851 JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:1932224|PMID:11222061) MGI PMID:11222061 MGI:1932224 NCBI chrNW_004936515:3,523,799...3,572,467 JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5617942|PMID:20203623) MGI PMID:20203623 MGI:5617942 NCBI chrNW_004936470:5,260,984...5,301,552 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (MGI:3522016|PMID:14689444) MGI PMID:14689444 MGI:3522016 NCBI chrNW_004936842:452,682...476,533 JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:3696486|PMID:17234593) MGI PMID:17234593 MGI:3696486 NCBI chrNW_004936740:489,357...514,235 JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO (MGI:3696486|PMID:17234593) MGI PMID:17234593 MGI:3696486 NCBI chrNW_004936706:476,473...494,659 JBrowse link
G Atxn1 ataxin 1 acts_upstream_of_or_within ISO (MGI:4818500|PMID:20628574)
(MGI:1270078|PMID:9651231)
MGI PMID:9651231 PMID:20628574 MGI:1270078 MGI:4818500 NCBI chrNW_004936552:2,498,711...2,521,225 JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO (MGI:3849110|PMID:19265195) MGI PMID:19265195 MGI:3849110 NCBI chrNW_004936474:25,298,806...25,308,369 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:3620005|PMID:16342120) MGI PMID:16342120 MGI:3620005 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO (MGI:3607037|PMID:16251435) MGI PMID:16251435 MGI:3607037 NCBI chrNW_004936606:2,168,104...2,867,560 JBrowse link
G Cacna1e calcium voltage-gated channel subunit alpha1 E acts_upstream_of_or_within ISO (MGI:1932239|PMID:11263998) MGI PMID:11263998 MGI:1932239 NCBI chrNW_004936481:7,694,960...7,908,683 JBrowse link
G Cck cholecystokinin ISO RGD PMID:12450740 RGD:1626100 NCBI chrNW_004936695:2,776,705...2,782,280 JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (MGI:3720432|PMID:17529984) MGI PMID:17529984 MGI:3720432 NCBI chrNW_004936527:6,478,934...6,483,848 JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit involved_in
acts_upstream_of_or_within
ISO (PMID:15964197)
(MGI:1332977|PMID:10064590), (MGI:3584096|PMID:12876201)
UniProt
MGI
PMID:10064590 PMID:12876201 PMID:15964197 MGI:1332977 MGI:3584096 NCBI chrNW_004936580:4,165,255...4,179,285 JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (MGI:5546446|PMID:23936366) MGI PMID:23936366 MGI:5546446 NCBI chrNW_004936562:2,269,341...2,369,098 JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:25031400 RGD:10059390 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 ISO postnatal blockade improves adult learning and memory RGD PMID:15932935 RGD:1626241 NCBI chrNW_004936541:2,288,847...2,333,129 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter acts_upstream_of_or_within ISO (MGI:3848688|PMID:17977621) MGI PMID:17977621 MGI:3848688 NCBI chrNW_004936677:342,964...360,890 JBrowse link
G Dbh dopamine beta-hydroxylase acts_upstream_of_or_within ISO (MGI:893736|PMID:9189272) MGI PMID:9189272 MGI:893736 NCBI chrNW_004936669:3,302,014...3,326,233 JBrowse link
G Dcdc2 doublecortin domain containing 2 acts_upstream_of
acts_upstream_of_or_within
ISO (MGI:5698331|PMID:25130614)
(MGI:5442271|PMID:21883923)
MGI PMID:21883923 PMID:25130614 MGI:5442271 MGI:5698331 NCBI chrNW_004936671:605,114...736,217 JBrowse link
G Ddhd2 DDHD domain containing 2 acts_upstream_of_or_within ISO (MGI:5608822|PMID:25267624) MGI PMID:25267624 MGI:5608822 NCBI chrNW_004936710:1,593,899...1,616,572 JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISO (MGI:5576037|PMID:24726472) UniProt PMID:24726472 MGI:5576037 NCBI chrNW_004936888:473,651...497,152 JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO (MGI:3530728|PMID:15684065)
(MGI:1274984|PMID:9692749), (MGI:3607822|PMID:10884517), (MGI:3607825|PMID:10585522)
MGI PMID:9692749 PMID:10585522 PMID:10884517 PMID:15684065 MGI:1274984 MGI:3530728 MGI:3607822 MGI:3607825 NCBI chrNW_004936609:790,647...795,187 JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO (MGI:3626135|PMID:12097513) MGI PMID:12097513 MGI:3626135 NCBI chrNW_004936612:1,094,686...1,154,149 JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO (MGI:3626135|PMID:12097513) MGI PMID:12097513 MGI:3626135 NCBI chrNW_004936536:1,580,732...1,616,726 JBrowse link
G Drd5 dopamine receptor D5 ISO RGD PMID:17142305 RGD:1600982 NCBI chrNW_004936477:16,860,222...16,863,505 JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:3589689|PMID:15654859) UniProt PMID:15654859 MGI:3589689 NCBI chrNW_004936471:20,934,524...20,935,584 JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (MGI:84850|PMID:8980238)
(MGI:3703316|PMID:17313573)
(MGI:3623866|PMID:16611824), (MGI:893741|PMID:9246451)
(MGI:86085|PMID:9054942)
(MGI:1858680|PMID:10818139)
MGI PMID:8980238 PMID:9054942 PMID:9246451 PMID:10818139 PMID:16611824 More... MGI:1858680 MGI:3623866 MGI:3703316 MGI:84850 MGI:86085 MGI:893741 NCBI chrNW_004936669:814,330...838,881 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO (MGI:70176|PMID:7816096) MGI PMID:7816096 MGI:70176 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (MGI:2676530|PMID:12972594) MGI PMID:12972594 MGI:2676530 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase acts_upstream_of_or_within ISO (MGI:3610917|PMID:12409258) MGI PMID:12409258 MGI:3610917 NCBI chrNW_004936549:1,378,536...1,400,501 JBrowse link
G Hrh1 histamine receptor H1 acts_upstream_of_or_within ISO (MGI:3703474|PMID:17145090) MGI PMID:17145090 MGI:3703474 NCBI chrNW_004936602:2,182,053...2,185,297 JBrowse link
G Hrh2 histamine receptor H2 acts_upstream_of_or_within ISO (MGI:3703474|PMID:17145090) MGI PMID:17145090 MGI:3703474 NCBI chrNW_004936609:624,446...664,049 JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (MGI:3771256|PMID:18022143) MGI PMID:18022143 MGI:3771256 NCBI chrNW_004936477:22,200,471...22,215,473 JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO (MGI:5139967|PMID:21734285) MGI PMID:21734285 MGI:5139967 NCBI chrNW_004936538:4,484,484...4,491,688 JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO (MGI:5315777|PMID:22357865) MGI PMID:22357865 MGI:5315777 NCBI chrNW_004936574:1,465,981...1,495,717 JBrowse link
G Kit KIT proto-oncogene, receptor tyrosine kinase ISO RGD PMID:11112797