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ONTOLOGY REPORT - ANNOTATIONS


Term:response to radiation
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Accession:GO:0009314 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment:Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms:exact_synonym: response to electromagnetic radiation stimulus;   response to radiation stimulus


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response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:19480974 RGD:2315755 NCBI chr15:67,492,494...67,563,265
Ensembl chr15:86,733,853...86,771,420
JBrowse link
G ANGPT2 angiopoietin 2 ISO pulsed electromagnetic field RGD PMID:15208265 RGD:2314237 NCBI chr 8:718,367...782,534
Ensembl chr 8:6,506,014...6,566,915
JBrowse link
G APP amyloid beta precursor protein ISO RGD PMID:26972535 RGD:13782153 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G AQP4 aquaporin 4 ISO RGD PMID:20137298 RGD:5490128 NCBI chr18:20,108,607...20,122,381
Ensembl chr18:23,713,146...23,726,919
JBrowse link
G BACE1 beta-secretase 1 ISO RGD PMID:26972535 RGD:13782153 NCBI chr11:112,120,950...112,151,505
Ensembl chr11:116,054,303...116,084,812
JBrowse link
G BCL2L1 BCL2 like 1 acts_upstream_of_or_within ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G CAT catalase ISO RGD PMID:20698742 PMID:22237725 RGD:9068891 RGD:9479171 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160
JBrowse link
G CCKAR cholecystokinin A receptor ISO RGD PMID:16472889 RGD:2313291 NCBI chr 4:20,881,340...20,890,986
Ensembl chr 4:26,157,702...26,166,773
JBrowse link
G CCR4 C-C motif chemokine receptor 4 ISO RGD PMID:19084914 RGD:2306303 NCBI chr 3:32,882,419...32,887,442
Ensembl chr 3:33,188,482...33,189,564
JBrowse link
G CDC25A cell division cycle 25A involved_in ISO (PMID:21376736) UniProt PMID:21376736 NCBI chr 3:48,068,601...48,099,806
Ensembl chr 3:49,154,307...49,186,115
JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:14736764) UniProt PMID:14736764 NCBI chr2B:76,285,115...76,322,703
Ensembl chr2B:194,204,613...194,242,956
JBrowse link
G CRP C-reactive protein ISO RGD PMID:24308182 RGD:8695929 NCBI chr 1:135,062,102...135,064,402 JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO RGD PMID:19024651 RGD:2306569 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231
JBrowse link
G F11R F11 receptor ISO RGD PMID:20180397 RGD:7488942 NCBI chr 1:136,399,766...136,424,722
Ensembl chr 1:140,324,943...140,346,890
JBrowse link
G FANCG FA complementation group G acts_upstream_of_or_within ISO (MGI:2154029|PMID:11719385) MGI PMID:11719385 MGI:2154029 NCBI chr 9:34,924,399...34,931,077
Ensembl chr 9:35,730,176...35,736,648
JBrowse link
G FOXP3 forkhead box P3 ISO RGD PMID:30328796 RGD:38549363 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A ISO RGD PMID:18302488 RGD:7257605 NCBI chr 6:31,476,710...31,491,411 JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25632565 RGD:11354959 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458
JBrowse link
G IGF2 insulin like growth factor 2 ISO RGD PMID:17630476 RGD:2311521 NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:19955748 RGD:4889159 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1R1 interleukin 1 receptor type 1 ISO RGD PMID:19022353 RGD:8662898 Ensembl chr2A:103,193,131...103,230,005 JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:20159792 RGD:2325788 NCBI chr17:10,134,450...10,194,596 JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:18439036 RGD:4890019 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:2668295|PMID:12833143) RGD
MGI
PMID:12833143 PMID:17252991 MGI:2668295 RGD:12910767 NCBI chr 4:69,199,543...69,282,323
Ensembl chr 4:75,761,946...75,844,473
JBrowse link
G KRT13 keratin 13 ISO RGD PMID:17649822 RGD:2316549 NCBI chr17:15,811,095...15,815,783
Ensembl chr17:16,028,747...16,033,434
JBrowse link
G LRP5 LDL receptor related protein 5 ISO RGD PMID:22704852 RGD:7240519 NCBI chr11:63,396,511...63,534,471
Ensembl chr11:66,735,246...66,839,817
JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (MGI:2678630|PMID:14562041) MGI PMID:14562041 MGI:2678630 NCBI chr 3:126,489,125...126,498,034
Ensembl chr 3:133,839,643...133,851,450
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO RGD PMID:19922364 RGD:2325703 NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:17337891 PMID:20159792 RGD:1642044 RGD:2325788 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:2677658|PMID:14517295) MGI PMID:14517295 MGI:2677658 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G NGF nerve growth factor ISO RGD PMID:19065562 RGD:2303800 NCBI chr 1:87,223,597...87,276,759 JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:17535653 RGD:4892305 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in ISO (PMID:17148573) UniProt PMID:17148573 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335
JBrowse link
G OPRK1 opioid receptor kappa 1 ISO RGD PMID:22337865 RGD:9831403 NCBI chr 8:49,650,844...49,677,494
Ensembl chr 8:47,029,313...47,056,577
JBrowse link
G OPRM1 opioid receptor mu 1 ISO RGD PMID:22337865 RGD:9831403 NCBI chr 6:151,827,323...151,937,658
Ensembl chr 6:156,517,661...157,088,251
JBrowse link
G PENK proenkephalin ISO RGD PMID:8584889 RGD:9999370 NCBI chr 8:52,864,388...52,870,144
Ensembl chr 8:50,234,170...50,239,949
JBrowse link
G PLK3 polo like kinase 3 involved_in ISO (PMID:21376736) UniProt PMID:21376736 NCBI chr 1:44,104,564...44,110,162
Ensembl chr 1:45,470,016...45,476,021
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18606213 RGD:5135219 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519
JBrowse link
G SERPINE2 serpin family E member 2 ISO RGD PMID:8373421 RGD:2317935 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040
JBrowse link
G SMC1A structural maintenance of chromosomes 1A involved_in ISO (PMID:11877377) UniProt PMID:11877377 NCBI chr  X:45,576,100...45,637,314
Ensembl chr  X:53,697,154...53,745,636
JBrowse link
G SNAI2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:2668295|PMID:12833143) MGI PMID:12833143 MGI:2668295 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904
JBrowse link
G SOD2 superoxide dismutase 2 ISO RGD PMID:22780102 RGD:8158084 NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO RGD PMID:11774400 RGD:2302113 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11774400 RGD:2302113 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:20458900 RGD:7394736 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a ISO RGD PMID:16752412 RGD:2302322 NCBI chr18:55,695,394...55,761,307
Ensembl chr18:59,034,770...59,075,044
JBrowse link
G TNFSF11 TNF superfamily member 11 ISO RGD PMID:16752412 RGD:2302322 NCBI chr13:23,750,835...23,784,740 JBrowse link
G TRPM7 transient receptor potential cation channel subfamily M member 7 ISO RGD PMID:16201261 RGD:5685001 NCBI chr15:29,513,220...29,639,506
Ensembl chr15:47,853,187...47,977,451
JBrowse link
G TXN thioredoxin involved_in ISO (PMID:11118054), (PMID:9108029) UniProt PMID:9108029 PMID:11118054 NCBI chr 9:81,399,056...81,411,607
Ensembl chr 9:109,565,557...109,578,311
JBrowse link
G VIM vimentin ISO RGD PMID:17649822 RGD:2316549 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chr14:48,256,951...48,275,831
Ensembl chr14:67,135,366...67,154,286
JBrowse link
G RS1 retinoschisin 1 acts_upstream_of_or_within ISO (MGI:3055638|PMID:15326152) MGI PMID:15326152 MGI:3055638 NCBI chr  X:11,259,222...11,282,289
Ensembl chr  X:18,624,687...18,657,315
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:16213212), (PMID:9925639) CAFA PMID:9925639 PMID:16213212 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (PMID:9925639) BHF-UCL PMID:9925639 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261
JBrowse link
G BCL2L1 BCL2 like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CRYAB crystallin alpha B acts_upstream_of_or_within ISO (PMID:23542032) MGI PMID:23542032 NCBI chr11:106,795,406...106,800,019
Ensembl chr11:110,639,442...110,644,272
JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075
JBrowse link
G EGR1 early growth response 1 involved_in ISO (MGI:3830454|PMID:19057511) BHF-UCL PMID:19057511 MGI:3830454 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G ELK1 ETS transcription factor ELK1 ISO RGD PMID:17949253 RGD:7488908 NCBI chr  X:40,071,433...40,086,518
Ensembl chr  X:47,967,492...47,982,579
JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO (MGI:5506835|PMID:23637614) MGI PMID:23637614 MGI:5506835 NCBI chr 6:156,067,696...156,095,131
Ensembl chr 6:158,126,665...158,153,663
JBrowse link
G HRAS HRas proto-oncogene, GTPase involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr11:537,488...540,810
Ensembl chr11:568,305...571,078
JBrowse link
G HSF1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:20470193 RGD:11354917 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458
JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692
JBrowse link
G LOC100986914 cytochrome b-245 light chain ISO RGD PMID:18640264 RGD:2317861 NCBI chr16:69,356,396...69,364,225
Ensembl chr16:89,016,349...89,024,719
JBrowse link
G LOC100994157 histone H2AX ISO RGD PMID:17552875 RGD:8693710 NCBI chr11:113,932,078...113,933,679 JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) UniProt PMID:11836244 NCBI chr2B:60,362,635...60,555,445
Ensembl chr2B:177,818,344...178,010,556
JBrowse link
G MDM2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
JBrowse link
G NOX4 NADPH oxidase 4 ISO RGD PMID:18640264 RGD:2317861 NCBI chr11:84,330,362...84,496,755 JBrowse link
G RAD51 RAD51 recombinase ISO RGD PMID:9885240 RGD:9831175 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207
JBrowse link
G RNF4 ring finger protein 4 ISO RGD PMID:22661230 RGD:9480235 NCBI chr 4:2,614,918...2,661,785
Ensembl chr 4:2,540,612...2,563,937
JBrowse link
G RPL13A ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chr19:46,485,729...46,504,928
Ensembl chr19:55,423,866...55,428,598
JBrowse link
G RPL26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977
JBrowse link
G TLK2 tousled like kinase 2 involved_in ISO (PMID:12660173) UniProt PMID:12660173 NCBI chr17:56,542,670...56,678,294
Ensembl chr17:61,689,998...61,830,394
JBrowse link
G TMEM109 transmembrane protein 109 acts_upstream_of_or_within ISO (PMID:23542032) MGI PMID:23542032 NCBI chr11:56,177,335...56,186,645
Ensembl chr11:59,617,802...59,627,349
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212)
(MGI:1354114|PMID:10710310)
CAFA
MGI
PMID:10710310 PMID:16213212 MGI:1354114 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:3818783 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
G TSPYL5 TSPY like 5 involved_in ISO (PMID:20079711) UniProt PMID:20079711 NCBI chr 8:93,573,775...93,918,775 JBrowse link
G WRN WRN RecQ like helicase involved_in ISO (PMID:21639834) UniProt PMID:21639834 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855
JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in ISO (PMID:18280240) UniProt PMID:18280240 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3583382|PMID:15980864) MGI PMID:15980864 MGI:3583382 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:3695811|PMID:17202487) MGI PMID:17202487 MGI:3695811 NCBI chr19:37,275,799...37,331,971
Ensembl chr19:45,791,800...45,840,271
JBrowse link
G SLC24A2 solute carrier family 24 member 2 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr 9:19,317,132...19,593,503
Ensembl chr 9:19,814,244...20,249,225
JBrowse link
G SLC24A4 solute carrier family 24 member 4 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr14:72,956,230...73,128,851
Ensembl chr14:92,299,507...92,468,939
JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBC3 BCL2 binding component 3 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chr19:44,203,517...44,215,860 JBrowse link
G BLM BLM RecQ like helicase involved_in ISO (PMID:23509288) UniProt PMID:23509288 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G CLOCK clock circadian regulator involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G ECT2 epithelial cell transforming 2 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chr 3:169,756,885...169,828,087
Ensembl chr 3:177,938,164...178,008,381
JBrowse link
G EEF1D eukaryotic translation elongation factor 1 delta involved_in ISO (PMID:8168075) UniProt PMID:8168075 NCBI chr 8:140,333,100...140,350,955
Ensembl chr 8:143,340,928...143,362,971
JBrowse link
G FBXO4 F-box protein 4 acts_upstream_of_or_within ISO (MGI:5299398|PMID:21911473) MGI PMID:21911473 MGI:5299398 NCBI chr 5:68,336,673...68,474,481
Ensembl chr 5:73,500,850...73,517,051
JBrowse link
G FIGNL1 fidgetin like 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr 7:51,080,052...51,093,694 JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr 1:66,925,063...66,928,222
Ensembl chr 1:68,880,912...68,884,188
JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr17:69,265,307...69,352,835
Ensembl chr17:74,817,471...74,903,796
JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005
JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in ISO (PMID:14654789) UniProt PMID:14654789 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424
JBrowse link
G INO80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) UniProt PMID:20687897 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311
JBrowse link
G INTS7 integrator complex subunit 7 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr 1:187,508,066...187,603,567
Ensembl chr 1:192,372,016...192,466,510
JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031
JBrowse link
G ITGB6 integrin subunit beta 6 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) MGI PMID:17916808 MGI:3842254 NCBI chr2B:47,386,913...47,496,491
Ensembl chr2B:164,764,251...164,867,426
JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr11:89,987,537...90,013,421 JBrowse link
G LIG4 DNA ligase 4 involved_in ISO (PMID:29463814) UniProt PMID:29463814 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:26415228 RGD:13204741 NCBI chr 1:10,729,933...10,764,865
Ensembl chr 1:11,945,880...11,981,077
JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO RGD PMID:9780001 RGD:2316946 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:27681750 RGD:13781886 NCBI chr 7:98,227,071...98,262,254 JBrowse link
G NET1 neuroepithelial cell transforming 1 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chr10:5,457,920...5,503,223
Ensembl chr10:5,444,127...5,489,509
JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr 5:75,452,153...75,465,022
Ensembl chr 5:80,732,954...80,744,448
JBrowse link
G RAD51 RAD51 recombinase involved_in ISO (PMID:23509288), (PMID:23754376) UniProt PMID:23509288 PMID:23754376 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207
JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879
JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214
JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr12:2,999,089...3,011,911
Ensembl chr12:2,930,957...2,943,419
JBrowse link
G RHOB ras homolog family member B involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chr2A:20,433,576...20,435,986
Ensembl chr2A:20,549,254...20,549,844
JBrowse link
G RPL26 ribosomal protein L26 involved_in ISO (MGI:5882892|PMID:16213212) CAFA PMID:16213212 MGI:5882892 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (MGI:5297784|PMID:17612497) UniProt PMID:17612497 MGI:5297784 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SNAI2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904
JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in ISO (PMID:23509288), (PMID:23754376) UniProt PMID:23509288 PMID:23754376 NCBI chr 8:43,691,454...44,166,259
Ensembl chr 8:41,083,964...41,558,170
JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr 9:99,396,439...99,410,054
Ensembl chr 9:128,064,569...128,078,380
JBrowse link
G TANK TRAF family member associated NFKB activator involved_in ISO (PMID:25861989) UniProt PMID:25861989 NCBI chr2B:48,426,036...48,525,265
Ensembl chr2B:165,820,833...165,896,438
JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) RGD
MGI
PMID:17916808 PMID:25600523 MGI:3842254 RGD:11073671 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 involved_in ISO (PMID:25749521) BHF-UCL PMID:25749521 NCBI chr11:52,541,056...52,566,544
Ensembl chr 3:160,029,550...160,054,494
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:20160708)
(MGI:3690827|PMID:16286009)
(MGI:5882892|PMID:16213212)
BHF-UCL
MGI
CAFA
PMID:16213212 PMID:16286009 PMID:20160708 MGI:3690827 MGI:5882892 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:3696487|PMID:17234588) MGI PMID:17234588 MGI:3696487 NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chr21:20,818,395...20,884,053 JBrowse link
G OPN5 opsin 5 involved_in ISO (MGI:6376341|PMID:31607531) UniProt PMID:31607531 MGI:6376341 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
JBrowse link
G RHO rhodopsin acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
JBrowse link
G RP1 RP1 axonemal microtubule associated acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr 8:50,979,412...51,311,431
Ensembl chr 8:48,419,033...48,583,879
Ensembl chr 8:48,419,033...48,583,879
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chr  X:30,718,669...30,777,671 JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19896109)
(MGI:4420740|PMID:19966281)
(MGI:4849309|PMID:21052544)
(MGI:4398796|PMID:19861548)
UniProt
MGI
PMID:19861548 PMID:19896109 PMID:19966281 PMID:21052544 MGI:4398796 MGI:4420740 MGI:4849309 NCBI chr15:9,492,500...9,653,644
Ensembl chr15:28,530,878...28,690,947
JBrowse link
cellular response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIRF adipogenesis regulatory factor involved_in ISO (PMID:23239344) UniProt PMID:23239344 NCBI chr10:83,395,796...83,428,549
Ensembl chr10:86,952,714...86,955,219
JBrowse link
G HSF1 heat shock transcription factor 1 ISO microwave RGD PMID:21241601 RGD:10403031 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866
JBrowse link
G IRS1 insulin receptor substrate 1 ISO RGD PMID:17427956 RGD:10045897 NCBI chr2B:113,973,191...114,041,127
Ensembl chr2B:232,849,239...232,852,967
JBrowse link
G MTCH2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chr11:47,566,884...47,596,711
Ensembl chr11:48,115,774...48,146,312
JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983 NCBI chr15:550,856...552,543
Ensembl chr15:27,027,373...27,028,285
JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:19424603) UniProt PMID:19424603 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
G ATR ATR serine/threonine kinase involved_in ISO (PMID:9925639) BHF-UCL PMID:9925639 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261
JBrowse link
G AURKB aurora kinase B involved_in ISO (PMID:20959462) UniProt PMID:20959462 NCBI chr17:43,447,661...43,453,864
Ensembl chr17:48,180,066...48,186,129
JBrowse link
G BAK1 BCL2 antagonist/killer 1 involved_in ISO (PMID:15901672)
(MGI:3689797|PMID:15901672)
UniProt PMID:15901672 MGI:3689797 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211
JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3042308|PMID:14963330) MGI PMID:14963330 MGI:3042308 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G BMF Bcl2 modifying factor involved_in ISO (PMID:23629966)
(MGI:5490676|PMID:23629966)
CAFA PMID:23629966 MGI:5490676 NCBI chr15:19,026,053...19,047,008
Ensembl chr15:37,281,655...37,302,075
JBrowse link
G CASP9 caspase 9 involved_in ISO (PMID:15657060) UniProt PMID:15657060 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266
JBrowse link
G CDC25A cell division cycle 25A involved_in ISO (PMID:19966869) UniProt PMID:19966869 NCBI chr 3:48,068,601...48,099,806
Ensembl chr 3:49,154,307...49,186,115
JBrowse link
G COPS9 COP9 signalosome subunit 9 involved_in ISO (PMID:26456823) UniProt PMID:26456823 NCBI chr2B:127,373,916...127,379,543
Ensembl chr2B:246,186,565...246,196,471
JBrowse link
G CREBBP CREB binding protein involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206
JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO (PMID:27940037) UniProt PMID:27940037 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chr14:47,935,691...47,960,055
Ensembl chr14:66,813,953...66,839,866
JBrowse link
G EP300 E1A binding protein p300 involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:17055345) BHF-UCL PMID:17055345 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO (MGI:5602914|PMID:24813610) UniProt PMID:24813610 MGI:5602914 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G INO80 INO80 complex ATPase subunit involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311
JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692
JBrowse link
G MAPK13 mitogen-activated protein kinase 13 involved_in ISO (PMID:9218798) UniProt PMID:9218798 NCBI chr 6:35,689,475...35,711,990
Ensembl chr 6:36,890,974...36,899,388
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:8875991 RGD:2304246 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in ISO (PMID:17592138)
(MGI:3829128|PMID:17592138)
BHF-UCL PMID:17592138 MGI:3829128 NCBI chr16:28,809,881...28,881,352
Ensembl chr16:47,698,353...47,769,755
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 acts_upstream_of_or_within ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chr14:5,141,699...5,156,021
Ensembl chr14:23,266,702...23,279,249
JBrowse link
G NOC2L NOC2 like nucleolar associated transcriptional repressor involved_in ISO (PMID:20959462) UniProt PMID:20959462 Ensembl chr 1:843,551...857,535 JBrowse link
G NPM1 nucleophosmin 1 involved_in ISO (PMID:19160485) CAFA PMID:19160485 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656
JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983 NCBI chr15:550,856...552,543
Ensembl chr15:27,027,373...27,028,285
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) BHF-UCL PMID:24289924 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
JBrowse link
G PBK PDZ binding kinase acts_upstream_of_or_within ISO (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chr 8:27,084,789...27,112,986
Ensembl chr 8:24,285,395...24,313,658
JBrowse link
G PCNA proliferating cell nuclear antigen involved_in ISO (PMID:24939902) RGD
UniProt
PMID:8905661 PMID:24939902 RGD:10448977 NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440
JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960
JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chr19:47,347,919...47,381,772
Ensembl chr19:56,251,356...56,297,611
JBrowse link
G POLK DNA polymerase kappa involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chr 5:39,700,659...39,788,727
Ensembl chr 5:40,311,526...40,401,003
JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chr19:45,872,596...45,876,376
Ensembl chr19:54,880,141...54,883,003
JBrowse link
G PRKCD protein kinase C delta involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519
JBrowse link
G PTN pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K involved_in ISO (PMID:16849327) UniProt PMID:16849327 NCBI chr 6:125,753,656...126,312,124
Ensembl chr 6:129,864,573...130,421,644
JBrowse link
G RHBDD1 rhomboid domain containing 1 involved_in ISO (MGI:5430884|PMID:19358743) UniProt PMID:19358743 MGI:5430884 NCBI chr2B:114,041,381...114,245,220
Ensembl chr2B:232,897,487...233,057,578
JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chr12:2,999,089...3,011,911
Ensembl chr12:2,930,957...2,943,419
JBrowse link
G RNF168 ring finger protein 168 acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687
JBrowse link
G RPL26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chr19:45,995,394...46,017,835
Ensembl chr19:54,739,474...54,761,407
JBrowse link
G SDE2 SDE2 telomere maintenance homolog involved_in ISO (PMID:27906959) UniProt PMID:27906959 NCBI chr 1:201,443,945...201,460,668
Ensembl chr 1:206,441,517...206,457,679
JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chr11:6,521,812...6,526,349 JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr  X:60,630,137...60,729,904
Ensembl chr  X:70,684,217...70,782,323
JBrowse link
G TMEM161A transmembrane protein 161A involved_in ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chr19:18,557,799...18,576,722
Ensembl chr19:19,560,046...19,578,779
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212), (PMID:23629966)
(MGI:3042308|PMID:14963330)
(MGI:5490676|PMID:23629966)
CAFA
MGI
PMID:14963330 PMID:16213212 PMID:23629966 MGI:3042308 MGI:5490676 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 acts_upstream_of_or_within ISO (MGI:2153600|PMID:11557757) MGI PMID:11557757 MGI:2153600 NCBI chr 8:91,545,655...91,569,535
Ensembl chr 8:93,747,162...93,767,196
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5014018|PMID:20511593) MGI PMID:20511593 MGI:5014018 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chr12:118,025,599...118,028,045
Ensembl chr12:121,400,063...121,402,506
JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr11:108,676,566...108,754,372
Ensembl chr11:112,517,693...112,595,585
JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in ISO (MGI:4839431|PMID:19966869) UniProt PMID:19966869 MGI:4839431 NCBI chr11:12,009,770...12,127,425
Ensembl chr11:11,703,617...11,821,074
JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) UniProt PMID:24657165 NCBI chr14:45,085,146...45,114,965
Ensembl chr14:63,354,458...63,359,403
JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CERS1 ceramide synthase 1 involved_in ISO (PMID:19800881) UniProt PMID:19800881 NCBI chr19:18,308,265...18,334,892 JBrowse link
G MME membrane metalloendopeptidase involved_in ISO (PMID:20876573) UniProt PMID:20876573 NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119
JBrowse link
G MMP1 matrix metallopeptidase 1 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr11:97,730,545...97,739,190
Ensembl chr11:101,221,393...101,230,104
JBrowse link
G MMP2 matrix metallopeptidase 2 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr16:35,711,866...35,738,881
Ensembl chr16:54,812,694...54,844,279
JBrowse link
G MMP3 matrix metallopeptidase 3 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr11:97,776,729...97,784,549
Ensembl chr11:101,267,566...101,275,354
JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G OPN1SW opsin 1, short wave sensitive involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr 7:120,724,363...120,727,649
Ensembl chr 7:133,246,131...133,251,464
JBrowse link
G OPN3 opsin 3 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr 1:217,155,765...217,202,577
Ensembl chr 1:222,136,422...222,184,598
JBrowse link
G OPN5 opsin 5 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
JBrowse link
G PPID peptidylprolyl isomerase D involved_in ISO (PMID:23220213) UniProt PMID:23220213 NCBI chr 4:151,029,144...151,043,151
Ensembl chr 4:162,839,247...162,853,245
JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chr  X:40,018,190...40,022,636
Ensembl chr  X:47,914,906...47,919,419
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in ISO (MGI:5613877|PMID:25329316) UniProt PMID:25329316 MGI:5613877 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chr 3:50,228,491...50,238,798
Ensembl chr 3:51,463,239...51,467,286
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chr 3:50,243,926...50,248,972
Ensembl chr 3:51,479,020...51,482,551
JBrowse link
G HYAL3 hyaluronidase 3 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chr 3:50,221,428...50,228,062
Ensembl chr 3:51,456,173...51,462,815
JBrowse link
G MFAP4 microfibril associated protein 4 involved_in ISO (PMID:22355679) BHF-UCL PMID:22355679 NCBI chr17:31,725,732...31,729,528
Ensembl chr17:36,890,778...36,893,230
JBrowse link
G MME membrane metalloendopeptidase involved_in ISO (PMID:20876573) UniProt PMID:20876573 NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119
JBrowse link
G RPL13A ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chr19:46,485,729...46,504,928
Ensembl chr19:55,423,866...55,428,598
JBrowse link
G RPL35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chr 9:95,978,395...95,982,568
Ensembl chr 9:124,496,145...124,500,271
JBrowse link
G STK11 serine/threonine kinase 11 involved_in ISO (PMID:25329316)
(MGI:5613877|PMID:25329316)
UniProt PMID:25329316 MGI:5613877 Ensembl chr19:1,188,537...1,210,677 JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C9H9orf116 chromosome 9 C9orf116 homolog acts_upstream_of_or_within ISO (MGI:4868626|PMID:21159655) MGI PMID:21159655 MGI:4868626 NCBI chr 9:106,635,911...106,641,274
Ensembl chr 9:135,628,471...135,633,837
JBrowse link
G CARD16 caspase recruitment domain family member 16 involved_in ISO (PMID:16920334) UniProt PMID:16920334 NCBI chr11:99,981,854...99,985,839 JBrowse link
G EI24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chr11:120,389,136...120,404,347
Ensembl chr11:124,302,289...124,317,346
JBrowse link
G IMPACT impact RWD domain protein involved_in ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chr18:17,678,297...17,720,348
Ensembl chr18:21,299,213...21,322,868
JBrowse link
G MDM2 MDM2 proto-oncogene ISO RGD PMID:14558917 RGD:2317408 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
JBrowse link
G POLH DNA polymerase eta acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704
JBrowse link
G POLI DNA polymerase iota acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chr18:47,653,545...47,706,614
Ensembl chr18:50,990,959...51,019,666
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
G CCND2 cyclin D2 acts_upstream_of_or_within ISO (MGI:5500853|PMID:23714078) MGI PMID:23714078 MGI:5500853 NCBI chr12:4,385,957...4,417,602
Ensembl chr12:4,309,272...4,335,551
JBrowse link
G DBN1 drebrin 1 ISO RGD PMID:23578130 RGD:10398817 NCBI chr 5:172,758,316...172,774,974
Ensembl chr 5:179,820,791...179,836,872
JBrowse link
G DNM2 dynamin 2 ISO RGD PMID:15994918 RGD:9685147 NCBI chr19:10,272,172...10,386,032
Ensembl chr19:10,933,672...11,106,478
JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:17090718 RGD:11041722 NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861
JBrowse link
G KAT5 lysine acetyltransferase 5 ISO RGD PMID:15985650 RGD:2316135 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667
JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:23331620 RGD:126790570 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in ISO (PMID:17468178) UniProt PMID:17468178 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in ISO (MGI:6694360|PMID:32629119) UniProt PMID:32629119 MGI:6694360
G SFRP1 secreted frizzled related protein 1 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 ISO RGD PMID:21915754 RGD:9586753 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741
JBrowse link
G XRCC5 X-ray repair cross complementing 5 ISO RGD PMID:11966321 RGD:727219 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235
JBrowse link
G XRCC6 X-ray repair cross complementing 6 ISO RGD PMID:11175667 RGD:2317102 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314
JBrowse link
cone photoresponse recovery term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC24A2 solute carrier family 24 member 2 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr 9:19,317,132...19,593,503
Ensembl chr 9:19,814,244...20,249,225
JBrowse link
G SLC24A4 solute carrier family 24 member 4 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr14:72,956,230...73,128,851
Ensembl chr14:92,299,507...92,468,939
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNB5 G protein subunit beta 5 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr15:31,061,310...31,122,427
Ensembl chr15:49,388,026...49,452,123
JBrowse link
G RGS9 regulator of G protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr17:59,085,707...59,176,368
Ensembl chr17:64,262,585...64,389,559
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr 5:35,622,645...35,696,451
Ensembl chr 5:35,893,841...35,966,932
JBrowse link
detection of light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin acts_upstream_of_or_within ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
JBrowse link
detection of light stimulus involved in visual perception term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BEST1 bestrophin 1 acts_upstream_of_or_within ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chr11:57,314,430...57,329,450
Ensembl chr11:60,672,835...60,687,417
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F involved_in ISO (PMID:7571473) UniProt PMID:7571473 NCBI chr  X:41,504,804...41,533,501
Ensembl chr  X:49,356,994...49,385,678
JBrowse link
G CACNA2D4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 involved_in ISO (PMID:17033974) UniProt PMID:17033974 NCBI chr12:1,906,894...2,030,991
Ensembl chr12:1,857,221...1,980,769
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (MGI:3795256|PMID:16636205) MGI PMID:16636205 MGI:3795256 NCBI chr2B:39,137,777...39,399,007 JBrowse link
G CCDC66 coiled-coil domain containing 66 involved_in ISO (MGI:5141557|PMID:21680557) CACAO PMID:21680557 MGI:5141557 NCBI chr 3:56,504,388...56,557,617
Ensembl chr 3:57,720,490...57,773,326
JBrowse link
G CEP250 centrosomal protein 250 involved_in ISO (MGI:6317055|PMID:30998843) UniProt PMID:30998843 MGI:6317055 NCBI chr20:31,782,894...31,847,152
Ensembl chr20:32,903,536...32,959,714
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chr16:38,160,056...38,249,474
Ensembl chr16:57,292,093...57,375,460
JBrowse link
G CRB1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:5315300|PMID:22447858) MGI PMID:22447858 MGI:5315300 NCBI chr 1:172,794,523...173,076,045
Ensembl chr 1:177,174,431...177,422,867
JBrowse link
G EYS eyes shut homolog involved_in ISO (PMID:18836446), (PMID:18976725), (PMID:20696082), (PMID:22363543) CACAO PMID:18836446 PMID:18976725 PMID:20696082 PMID:22363543 NCBI chr 6:61,424,943...62,195,228 JBrowse link
G GJA10 gap junction protein alpha 10 acts_upstream_of_or_within ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chr 6:87,774,889...87,776,520
Ensembl chr 6:91,046,601...91,072,335
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:17584859)
(MGI:3772743|PMID:18171936)
UniProt
MGI
PMID:17584859 PMID:18171936 MGI:3772743 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12077706)
(MGI:3714271|PMID:17065522)
UniProt
MGI
PMID:12077706 PMID:17065522 MGI:3714271 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
JBrowse link
G GRM6 glutamate metabotropic receptor 6 involved_in ISO (PMID:17405131) UniProt PMID:17405131 NCBI chr 5:174,142,754...174,156,294
Ensembl chr 5:181,434,031...181,447,341
JBrowse link
G GUCY2F guanylate cyclase 2F, retinal involved_in ISO (MGI:3708225|PMID:17255100) CACAO PMID:17255100 MGI:3708225 NCBI chr  X:98,481,609...98,590,680
Ensembl chr  X:108,952,200...109,061,441
JBrowse link
G PRPH2 peripherin 2 acts_upstream_of_or_within ISO (MGI:5905515|PMID:28053051)
(MGI:6305433|PMID:26420485)
(MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485)
MGI PMID:26420485 PMID:28053051 MGI:5905515 MGI:6305433 NCBI chr 6:42,284,818...42,316,150
Ensembl chr 6:43,582,317...43,608,011
JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (MGI:3687059|PMID:12484775) MGI PMID:12484775 MGI:3687059 NCBI chr10:90,337,879...90,347,530
Ensembl chr10:93,848,166...93,857,887
JBrowse link
G REEP6 receptor accessory protein 6 involved_in ISO (PMID:27889058) UniProt PMID:27889058 Ensembl chr19:1,467,186...1,473,988 JBrowse link
G RGS9BP regulator of G protein signaling 9 binding protein acts_upstream_of_or_within ISO (MGI:3027216|PMID:14625292) MGI PMID:14625292 MGI:3027216 NCBI chr19:29,595,159...29,597,612
Ensembl chr19:38,343,663...38,344,370
JBrowse link
G ROM1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO (MGI:5905515|PMID:28053051) MGI PMID:28053051 MGI:5905515 NCBI chr11:57,970,290...57,972,658
Ensembl chr11:61,324,900...61,327,278
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904
JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in ISO (PMID:21521437) CACAO PMID:21521437 NCBI chr14:2,105,703...2,169,362
Ensembl chr14:20,185,236...20,247,064
JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chr 5:9,349,473...9,852,183
Ensembl chr 5:9,168,549...9,564,356
JBrowse link
G SEMA5B semaphorin 5B acts_upstream_of_or_within ISO (MGI:5140622|PMID:21835343) MGI PMID:21835343 MGI:5140622 NCBI chr 3:119,996,933...120,116,899
Ensembl chr 3:126,900,966...126,986,186
JBrowse link
G TULP1 TUB like protein 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chr 6:35,058,422...35,073,472
Ensembl chr 6:36,151,747...36,166,160
JBrowse link
detection of UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FECH ferrochelatase acts_upstream_of_or_within ISO (MGI:2384247|PMID:12149233) MGI PMID:12149233 MGI:2384247 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378
JBrowse link
detection of visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chr16:35,556,558...35,563,568
Ensembl chr16:54,662,732...54,669,745
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chr  X:17,290,805...17,592,163
Ensembl chr  X:24,657,878...24,960,231
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5562498|PMID:23993650) MGI PMID:23993650 MGI:5562498 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chr10:64,714,546...64,716,341 JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in ISO (MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:3798698 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chr19:18,123,375...18,221,832
Ensembl chr19:19,131,484...19,228,980
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in ISO (MGI:5490394|PMID:23616524) UniProt PMID:23616524 MGI:5490394 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856), (MGI:5490394|PMID:23616524) UniProt PMID:23452855 PMID:23452856 PMID:23616524 MGI:5470183 MGI:5487698 MGI:5490394 NCBI chr13:58,219,260...58,244,780
Ensembl chr13:77,266,496...77,283,651
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISO (MGI:3838062|PMID:19217292) UniProt PMID:19217292 MGI:3838062 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G LOC100972235 putative F-box/LRR-repeat protein 21 involved_in ISO (MGI:5470183|PMID:23452855), (MGI:5487698|PMID:23452856) UniProt PMID:23452855 PMID:23452856 MGI:5470183 MGI:5487698 NCBI chr 5:131,321,680...131,342,838 JBrowse link
G MTA1 metastasis associated 1 involved_in ISO (MGI:5582861|PMID:24089055) UniProt PMID:24089055 MGI:5582861 NCBI chr14:86,058,412...86,111,736 JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 acts_upstream_of_or_within ISO (MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:3530176 NCBI chr19:16,719,444...16,733,006 JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:83,082,351...83,095,161 JBrowse link
G OPN5 opsin 5 involved_in ISO (MGI:5699646|PMID:26392540), (MGI:6376341|PMID:31607531), (MGI:6378274|PMID:30240620) UniProt PMID:26392540 PMID:30240620 PMID:31607531 MGI:5699646 MGI:6376341 MGI:6378274 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
JBrowse link
G PER1 period circadian regulator 1 involved_in ISO (MGI:3578039|PMID:15888647) UniProt PMID:15888647 MGI:3578039 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (MGI:5314433|PMID:22274616) UniProt PMID:22274616 MGI:5314433 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chr11:62,756,659...62,760,369
Ensembl chr11:66,068,007...66,071,611
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chr2A:28,758,176...28,809,561
Ensembl chr2A:28,862,083...28,889,401
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in ISO (MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:5086036 NCBI chr12:108,288,158...108,311,128
Ensembl chr12:111,681,611...111,705,658
JBrowse link
G RBM4 RNA binding motif protein 4 involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr11:61,996,221...62,026,007
Ensembl chr11:65,298,404...65,349,183
JBrowse link
G RBM4B RNA binding motif protein 4B involved_in ISO (MGI:3703208|PMID:17264215) UniProt PMID:17264215 MGI:3703208 NCBI chr11:62,022,622...62,035,570
Ensembl chr11:65,345,796...65,358,473
JBrowse link
G SIK1 salt inducible kinase 1 involved_in ISO (MGI:5532783|PMID:23993098) UniProt PMID:23993098 MGI:5532783 NCBI chr21:29,675,040...29,689,408 JBrowse link
G TP53 tumor protein p53 involved_in ISO (MGI:5613453|PMID:24051492) UniProt PMID:24051492 MGI:5613453 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO (MGI:5607210|PMID:23213472) UniProt PMID:23213472 MGI:5607210 NCBI chr11:114,196,725...114,223,411
Ensembl chr11:118,124,350...118,150,868
JBrowse link
light adaption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNB5 G protein subunit beta 5 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr15:31,061,310...31,122,427
Ensembl chr15:49,388,026...49,452,123
JBrowse link
G RGS9 regulator of G protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr17:59,085,707...59,176,368
Ensembl chr17:64,262,585...64,389,559
JBrowse link
long-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRP agouti related neuropeptide ISO RGD PMID:19490367 RGD:6480663 NCBI chr16:47,827,532...47,872,727
Ensembl chr16:67,216,008...67,217,258
JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKDC protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076
JBrowse link
optokinetic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747
JBrowse link
G OPN4 opsin 4 involved_in ISO (MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:5699646 NCBI chr10:83,082,351...83,095,161 JBrowse link
photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AANAT aralkylamine N-acetyltransferase ISO RGD PMID:12358739 RGD:628397 NCBI chr17:70,401,103...70,418,551
Ensembl chr17:75,951,915...75,967,411
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18321474 RGD:2301031 NCBI chr11:640,401...646,775 JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:16962714 RGD:2293767 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397
JBrowse link
G NMU neuromedin U ISO RGD PMID:17726140 RGD:1642120 NCBI chr 4:68,299,538...68,340,680
Ensembl chr 4:74,867,364...74,904,965
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:21076970 RGD:10448986 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600
JBrowse link
phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 acts_upstream_of_or_within ISO (MGI:3772638|PMID:11853756) MGI PMID:11853756 MGI:3772638 NCBI chr11:70,319,935...70,411,276
Ensembl chr11:73,630,276...73,654,155
JBrowse link
G ASIC2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (MGI:3042539|PMID:14762118) MGI PMID:14762118 MGI:3042539 NCBI chr17:22,628,322...23,774,249 JBrowse link
G CABP4 calcium binding protein 4 acts_upstream_of_or_within ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chr11:62,813,477...62,820,425
Ensembl chr11:66,121,992...66,128,758
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO (MGI:3527312|PMID:15634774) MGI PMID:15634774 MGI:3527312 NCBI chr16:38,160,056...38,249,474
Ensembl chr16:57,292,093...57,375,460
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within ISO (MGI:1928441|PMID:11095744), (MGI:3609280|PMID:16249514), (MGI:3615719|PMID:15073279), (MGI:3757777|PMID:17881533), (MGI:3772638|PMID:11853756), (MGI:3778702|PMID:18367617) MGI PMID:11095744 PMID:11853756 PMID:15073279 PMID:16249514 PMID:17881533 More... MGI:1928441 MGI:3609280 MGI:3615719 MGI:3757777 MGI:3772638 MGI:3778702 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO (MGI:3761397|PMID:17408617), (MGI:3772743|PMID:18171936) MGI PMID:17408617 PMID:18171936 MGI:3761397 MGI:3772743 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 acts_upstream_of_or_within ISO (MGI:3778702|PMID:18367617) MGI PMID:18367617 MGI:3778702 NCBI chr 7:85,839,639...85,859,844
Ensembl chr 7:99,446,623...99,451,185
JBrowse link
G GUCA1A guanylate cyclase activator 1A acts_upstream_of_or_within ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028 NCBI chr 6:41,693,593...41,774,591
Ensembl chr 6:43,045,307...43,070,520
JBrowse link
G GUCA1B guanylate cyclase activator 1B acts_upstream_of_or_within ISO (MGI:2664110|PMID:11493703), (MGI:3584028|PMID:15173221) MGI PMID:11493703 PMID:15173221 MGI:2664110 MGI:3584028 NCBI chr 6:41,771,537...41,783,364
Ensembl chr 6:43,072,469...43,083,838
JBrowse link
G OPN4 opsin 4 involved_in ISO (MGI:2667269|PMID:12808468)
(PMID:15674244)
RGD
UniProt
PMID:11834834 PMID:12808468 PMID:15674244 MGI:2667269 RGD:633348 NCBI chr10:83,082,351...83,095,161 JBrowse link
G OPN5 opsin 5 involved_in ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
JBrowse link
G RCVRN recoverin acts_upstream_of_or_within ISO (MGI:3584028|PMID:15173221) MGI PMID:15173221 MGI:3584028 NCBI chr17:41,747,255...41,759,074
Ensembl chr17:46,490,605...46,502,962
JBrowse link
G RHO rhodopsin acts_upstream_of_or_within ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
JBrowse link
G SLC24A2 solute carrier family 24 member 2 acts_upstream_of ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr 9:19,317,132...19,593,503
Ensembl chr 9:19,814,244...20,249,225
JBrowse link
G SLC24A4 solute carrier family 24 member 4 acts_upstream_of ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr14:72,956,230...73,128,851
Ensembl chr14:92,299,507...92,468,939
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OPN5 opsin 5 involved_in ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
UniProt PMID:22043319 MGI:6230806 NCBI chr 6:47,364,955...47,409,199
Ensembl chr 6:48,628,478...48,658,119
JBrowse link
phototransduction, visible light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within ISO (MGI:3054118|PMID:15365173) MGI PMID:15365173 MGI:3054118 NCBI chr17:6,463,812...6,473,636
Ensembl chr17:6,450,420...6,461,868
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 involved_in ISO (PMID:12196552) AgBase PMID:12196552 NCBI chr11:58,261,476...58,274,685
Ensembl chr11:61,614,818...61,616,200
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in ISO (PMID:17584859) UniProt PMID:17584859 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
JBrowse link
G PDE6C phosphodiesterase 6C acts_upstream_of_or_within ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chr10:90,361,003...90,414,169
Ensembl chr10:93,871,704...93,924,654
JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:16061642) UniProt PMID:16061642 NCBI chr12:22,954,946...23,096,623 JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO RGD PMID:28007901 RGD:12879399 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in ISO (PMID:19735555) UniProt PMID:19735555 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 involved_in ISO (PMID:12080348) UniProt PMID:12080348 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within ISO (MGI:3054118|PMID:15365173)
(MGI:3054134|PMID:15365178)
MGI PMID:15365173 PMID:15365178 MGI:3054118 MGI:3054134 NCBI chr17:6,463,812...6,473,636
Ensembl chr17:6,450,420...6,461,868
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 involved_in ISO (PMID:15946941) UniProt PMID:15946941 NCBI chr13:94,816,045...94,838,509
Ensembl chr13:113,867,002...113,885,610
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK1 checkpoint kinase 1 involved_in ISO (MGI:5294291|PMID:18243098) UniProt PMID:18243098 MGI:5294291 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPL26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977
JBrowse link
response to blue light term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPT1B carnitine palmitoyltransferase 1B involved_in ISO (MGI:6392469|PMID:32040503) UniProt PMID:32040503 MGI:6392469 NCBI chr22:30,815,073...30,825,341
Ensembl chr22:49,926,893...49,935,420
JBrowse link
G DCT dopachrome tautomerase involved_in ISO (PMID:28842328) UniProt PMID:28842328 NCBI chr13:75,590,366...75,730,956
Ensembl chr13:94,773,794...94,816,083
JBrowse link
G KCNJ10 potassium inwardly rectifying channel subfamily J member 10 ISO RGD PMID:18450590 RGD:2326038 NCBI chr 1:135,391,321...135,424,100 JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:30574656 RGD:126781752 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
JBrowse link
G OPN3 opsin 3 involved_in ISO (PMID:28842328)
(MGI:6392469|PMID:32040503)
(PMID:30168605)
UniProt PMID:28842328 PMID:30168605 PMID:32040503 MGI:6392469 NCBI chr 1:217,155,765...217,202,577
Ensembl chr 1:222,136,422...222,184,598
JBrowse link
G TYR tyrosinase involved_in ISO (PMID:28842328) UniProt PMID:28842328 NCBI chr11:84,188,557...84,306,686
Ensembl chr11:87,769,606...87,888,138
JBrowse link
response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chr12:7,777,734...7,793,960
Ensembl chr12:7,939,262...7,944,203
JBrowse link
G BAK1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:3722566|PMID:17068116) MGI PMID:17068116 MGI:3722566 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211
JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3722566|PMID:17068116) MGI PMID:17068116 MGI:3722566 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1858868|PMID:10815637), (MGI:2156164|PMID:8170972), (MGI:3722566|PMID:17068116), (MGI:62849|PMID:8372353) MGI PMID:8170972 PMID:8372353 PMID:10815637 PMID:17068116 MGI:1858868 MGI:2156164 MGI:3722566 MGI:62849 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:87113|PMID:9126738)
(MGI:1277623|PMID:9699678)
MGI PMID:9126738 PMID:9699678 MGI:1277623 MGI:87113 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332
JBrowse link
G CASP6 caspase 6 ISO RGD PMID:10590178 RGD:2301333 NCBI chr 4:102,186,215...102,201,992
Ensembl chr 4:112,753,988...112,768,836
JBrowse link
G CAV1 caveolin 1 ISO RGD PMID:17993744 RGD:2289115 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:16301331 RGD:1579837 NCBI chr11:114,044,996...114,149,204
Ensembl chr11:117,973,187...118,074,671
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO RGD PMID:19084914 RGD:2306303 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384
JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:3032464|PMID:14744935) MGI PMID:14744935 MGI:3032464 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 ISO RGD PMID:20185578 RGD:5134998 NCBI chr 4:50,325,248...50,327,165
Ensembl chr 4:56,153,899...56,159,474
JBrowse link
G CXCL10 C-X-C motif chemokine ligand 10 ISO RGD PMID:19084914 RGD:2306303 NCBI chr 4:48,182,355...48,184,733
Ensembl chr 4:54,020,204...54,022,606
JBrowse link
G CXCL2 C-X-C motif chemokine ligand 2 ISO RGD PMID:20185578 RGD:5134998 NCBI chr 4:50,092,989...50,095,541
Ensembl chr 4:55,925,562...55,986,555
JBrowse link
G CXCL6 C-X-C motif chemokine ligand 6 ISO RGD PMID:20185578 RGD:5134998 NCBI chr 4:50,357,643...50,359,822
Ensembl chr 4:56,189,961...56,192,402
JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164
JBrowse link
G DCUN1D3 defective in cullin neddylation 1 domain containing 3 involved_in ISO (PMID:18823379) UniProt PMID:18823379 NCBI chr16:17,508,722...17,554,042
Ensembl chr16:20,886,665...20,931,611
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:19169047 RGD:9685443 NCBI chr10:92,365,267...92,511,852
Ensembl chr10:95,828,094...95,983,257
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:3054497|PMID:15340056) MGI PMID:15340056 MGI:3054497 NCBI chr10:44,703,720...44,784,948 JBrowse link
G FANCD2 FA complementation group D2 involved_in ISO (PMID:12874027) UniProt PMID:12874027 NCBI chr 3:9,932,292...10,037,332
Ensembl chr 3:10,312,476...10,389,190
JBrowse link
G GATA3 GATA binding protein 3 ISO RGD PMID:19084914 RGD:2306303 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G GPX1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3044494|PMID:15182862) MGI PMID:15182862 MGI:3044494 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826
JBrowse link
G IL1A interleukin 1 alpha ISO RGD PMID:16524844 RGD:2311096 NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801
JBrowse link
G IL1B interleukin 1 beta ISO RGD PMID:16524844 RGD:2311096 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL6R interleukin 6 receptor ISO RGD PMID:14751512 RGD:1625440 NCBI chr 1:129,761,914...129,824,386
Ensembl chr 1:133,374,078...133,433,089
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993) MGI PMID:9823897 PMID:10911993 MGI:1312981 MGI:1860400 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555
JBrowse link
G MEN1 menin 1 involved_in ISO (PMID:12874027) UniProt PMID:12874027 NCBI chr11:60,159,009...60,166,222
Ensembl chr11:63,499,962...63,507,164
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19179467) UniProt PMID:19179467 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:14994994 RGD:10414067 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
JBrowse link
G PML PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:1306978|PMID:9806545)
(MGI:3701394|PMID:11025664)
MGI PMID:9806545 PMID:11025664 MGI:1306978 MGI:3701394 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G POLB DNA polymerase beta ISO RGD PMID:12425958 RGD:8694104 NCBI chr 8:41,582,370...41,615,950
Ensembl chr 8:39,026,991...39,060,464
JBrowse link
G POLG DNA polymerase gamma, catalytic subunit ISO RGD PMID:12425958 RGD:8694104 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4822286|PMID:20647423) UniProt PMID:20647423 MGI:4822286 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:1290043|PMID:9768755) MGI PMID:9768755 MGI:1290043 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C ISO RGD PMID:17290791 RGD:1599984 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994
JBrowse link
G SOCS3 suppressor of cytokine signaling 3 ISO RGD PMID:14751512 PMID:16937495 RGD:1625440 RGD:2298916 NCBI chr17:72,433,206...72,436,500
Ensembl chr17:77,983,389...77,984,066
JBrowse link
G SOD2 superoxide dismutase 2 acts_upstream_of_or_within ISO (MGI:3044494|PMID:15182862) MGI PMID:15182862 MGI:3044494 NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:5498602|PMID:23726973) MGI PMID:23726973 MGI:5498602 NCBI chr12:4,429,945...4,462,142
Ensembl chr12:4,353,272...4,385,380
JBrowse link
G TOP1 DNA topoisomerase I ISO RGD PMID:2853856 RGD:2317066 NCBI chr20:37,368,606...37,464,649
Ensembl chr20:38,468,452...38,562,652
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:7958916)
(MGI:3722566|PMID:17068116)
(MGI:3032464|PMID:14744935)
BHF-UCL
MGI
PMID:7958916 PMID:14744935 PMID:17068116 MGI:3032464 MGI:3722566 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in ISO (PMID:21333377) UniProt PMID:21333377 NCBI chr13:31,137,236...31,153,398
Ensembl chr13:49,889,041...49,900,488
JBrowse link
G XRCC2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3652689|PMID:16777961) MGI PMID:16777961 MGI:3652689 NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:1913213|PMID:9875844) MGI PMID:9875844 MGI:1913213 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490
JBrowse link
response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:17854381 RGD:8547925 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G RDH13 retinol dehydrogenase 13 acts_upstream_of_or_within ISO (MGI:5462166|PMID:22605914) MGI PMID:22605914 MGI:5462166 NCBI chr19:52,081,674...52,107,781
Ensembl chr19:60,776,114...60,794,267
JBrowse link
response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG5 ATP binding cassette subfamily G member 5 ISO RGD PMID:17132608 RGD:1598660 NCBI chr2A:43,896,188...43,922,756
Ensembl chr2A:44,745,183...44,771,012
JBrowse link
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chr 4:40,711,139...40,736,763
Ensembl chr 4:46,556,892...46,581,573
JBrowse link
G AEN apoptosis enhancing nuclease involved_in ISO (PMID:16171785) UniProt PMID:16171785 NCBI chr15:67,237,871...67,321,808
Ensembl chr15:86,518,204...86,529,579
JBrowse link
G ALAD aminolevulinate dehydratase ISO 131Iodine RGD PMID:17916974 RGD:4144160 NCBI chr 9:84,488,339...84,503,360
Ensembl chr 9:112,859,171...112,873,784
JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
ISO (PMID:11375976), (PMID:9733515)
(MGI:1352316|PMID:10639175)
(MGI:3836659|PMID:19061978)
BHF-UCL
MGI
PMID:9733515 PMID:10639175 PMID:11375976 PMID:19061978 MGI:1352316 MGI:3836659 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in ISO (PMID:19261748), (PMID:19261749) UniProt PMID:19261748 PMID:19261749 NCBI chr19:16,755,518...16,767,634
Ensembl chr19:17,729,568...17,742,447
JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in ISO (PMID:19261748), (PMID:19261749) UniProt PMID:19261748 PMID:19261749 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519
JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:1352316|PMID:10639175)
(MGI:3512739|PMID:15578100)
MGI PMID:10639175 PMID:15578100 MGI:1352316 MGI:3512739 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G BRAT1 BRCA1 associated ATM activator 1 involved_in ISO (PMID:16452482) UniProt PMID:16452482 NCBI chr 7:2,797,551...2,815,847
Ensembl chr 7:2,892,302...2,910,143
JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815
JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669
JBrowse link
G BRSK1 BR serine/threonine kinase 1 NOT|involved_in ISO (PMID:15150265) UniProt PMID:15150265 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659
JBrowse link
G C10H10orf90 chromosome 10 C10orf90 homolog involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chr10:122,987,122...123,243,653
Ensembl chr10:127,259,451...127,357,119
JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO RGD PMID:16937495 RGD:2298916 NCBI chr 3:46,273,096...46,278,471
Ensembl chr 3:47,380,321...47,381,379
JBrowse link
G CLK2 CDC like kinase 2 involved_in ISO (PMID:20682768) UniProt PMID:20682768 NCBI chr 1:130,607,877...130,618,461
Ensembl chr 1:134,213,237...134,221,288
JBrowse link
G COP1 COP1 E3 ubiquitin ligase involved_in ISO (PMID:19805145) UniProt PMID:19805145 NCBI chr 1:151,459,354...151,727,131
Ensembl chr 1:155,156,185...155,425,156
JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164
JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr10:99,431,762...99,439,619
Ensembl chr10:102,896,376...102,901,514
JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 ISO RGD PMID:16806633 RGD:1601035 NCBI chr11:14,960,651...14,989,083
Ensembl chr11:14,656,939...14,671,584
JBrowse link
G DCLRE1C DNA cross-link repair 1C acts_upstream_of_or_within ISO (MGI:3514096|PMID:12615897)
(MGI:2447929|PMID:12504013)
MGI PMID:12504013 PMID:12615897 MGI:2447929 MGI:3514096 NCBI chr10:14,901,335...14,956,947
Ensembl chr10:15,236,558...15,269,043
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:17148264 RGD:1601086 NCBI chr19:9,681,847...9,745,334
Ensembl chr19:10,342,478...10,406,972
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha ISO RGD PMID:17148264 RGD:1601086 NCBI chr2A:25,229,593...25,344,733
Ensembl chr2A:25,331,095...25,412,605
JBrowse link
G DNMT3B DNA methyltransferase 3 beta ISO RGD PMID:17148264 RGD:1601086 NCBI chr20:29,049,993...29,096,957
Ensembl chr20:30,186,069...30,215,487
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chr 8:67,728,057...68,060,069
Ensembl chr 8:69,387,769...69,551,829
JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chr 1:27,230,623...27,349,355
Ensembl chr 1:28,270,116...28,386,878
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO gamma irradiation RGD PMID:20385203 RGD:4145425 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
JBrowse link
G INIP INTS3 and NABP interacting protein involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chr 9:83,811,378...83,845,638
Ensembl chr 9:111,965,947...111,999,561
JBrowse link
G INTS3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chr 1:129,084,681...129,130,669
Ensembl chr 1:132,714,200...132,759,842
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in ISO (PMID:18397884) UniProt PMID:18397884 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667
JBrowse link
G LIG4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:4943978|PMID:21390131)
(MGI:1859491|PMID:10823907)
MGI PMID:10823907 PMID:21390131 MGI:1859491 MGI:4943978 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555
JBrowse link
G LOC100975309 keratin, type I cytoskeletal 14 ISO RGD PMID:12793764 RGD:1600177 NCBI chr17:15,730,066...15,734,665
Ensembl chr17:15,948,596...15,953,191
JBrowse link
G LZIC leucine zipper and CTNNBIP1 domain containing ISO RGD PMID:19444910 RGD:2314410 NCBI chr 1:8,698,579...8,712,867
Ensembl chr 1:9,928,998...9,942,490
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:17148264 RGD:1601086 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854
JBrowse link
G MRNIP MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chr 5:174,989,967...175,020,550
Ensembl chr 5:182,299,016...182,340,632
JBrowse link
G MTA1 metastasis associated 1 involved_in ISO (PMID:19805145)
(MGI:4366101|PMID:19805145)
UniProt PMID:19805145 MGI:4366101 NCBI chr14:86,058,412...86,111,736 JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chr2B:78,980,156...78,989,309
Ensembl chr2B:196,895,166...196,903,977
JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chr12:32,685,521...32,693,318
Ensembl chr12:32,937,017...32,944,754
JBrowse link
G NEK1 NIMA related kinase 1 acts_upstream_of_or_within ISO (MGI:3522367|PMID:15604234) MGI PMID:15604234 MGI:3522367 NCBI chr 4:161,618,181...161,830,332
Ensembl chr 4:173,690,074...173,902,100
JBrowse link
G NES nestin ISO RGD PMID:12445635 RGD:1642076 NCBI chr 1:132,012,273...132,020,907
Ensembl chr 1:135,835,456...135,844,094
JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in ISO (PMID:16439205) UniProt PMID:16439205 NCBI chr2B:106,326,596...106,419,928
Ensembl chr2B:224,926,183...225,008,788
JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in ISO (PMID:15456759) UniProt PMID:15456759 NCBI chr 7:146,546,658...146,605,912
Ensembl chr 7:158,276,798...158,330,911
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:5014034|PMID:20150414) MGI PMID:20150414 MGI:5014034 NCBI chr 8:44,201,391...44,386,803
Ensembl chr 8:41,593,029...41,778,299
JBrowse link
G RAD54B RAD54 homolog B acts_upstream_of_or_within ISO (MGI:3836659|PMID:19061978)
(MGI:3615835|PMID:16428451)
MGI PMID:16428451 PMID:19061978 MGI:3615835 MGI:3836659 NCBI chr 8:90,995,229...91,098,149
Ensembl chr 8:92,939,535...93,034,060
JBrowse link
G RAD54L RAD54 like acts_upstream_of_or_within ISO (MGI:3615835|PMID:16428451), (MGI:5014034|PMID:20150414)
(MGI:3836659|PMID:19061978)
MGI PMID:16428451 PMID:19061978 PMID:20150414 MGI:3615835 MGI:3836659 MGI:5014034 NCBI chr 1:45,549,586...45,581,711
Ensembl chr 1:46,905,598...46,936,259
JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) UniProt PMID:20173098 NCBI chr16:55,187,178...55,233,265
Ensembl chr16:74,541,450...74,586,951
JBrowse link
G RNF168 ring finger protein 168 involved_in ISO (PMID:19203578), (PMID:19203579) UniProt PMID:19203578 PMID:19203579 NCBI chr 3:193,814,785...193,848,620
Ensembl chr 3:203,756,589...203,790,687
JBrowse link
G RNF8 ring finger protein 8 involved_in ISO (PMID:18001824), (PMID:18001825) UniProt PMID:18001824 PMID:18001825 NCBI chr 6:36,918,705...36,955,380
Ensembl chr 6:38,108,414...38,145,949
JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:19444910 RGD:2314410 NCBI chr11:3,956,528...3,999,205
Ensembl chr11:4,068,119...4,110,474
JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:8706124)
(MGI:82530|PMID:8706124)
UniProt PMID:8706124 MGI:82530 NCBI chr11:6,521,812...6,526,349 JBrowse link
G STAR steroidogenic acute regulatory protein ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544
JBrowse link
G STK11 serine/threonine kinase 11 involved_in ISO (MGI:5284815|PMID:12234250) UniProt PMID:12234250 MGI:5284815 Ensembl chr19:1,188,537...1,210,677 JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:22965249 RGD:13432139 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207
JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:12773567) UniProt PMID:12773567 NCBI chr 3:130,667,998...130,729,569
Ensembl chr 3:138,143,893...138,203,363
JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (MGI:3624572|PMID:16702401) MGI PMID:16702401 MGI:3624572 NCBI chr 1:199,403,194...199,469,079
Ensembl chr 1:204,414,218...204,457,739
JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in ISO (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 NCBI chr 5:172,205,958...172,321,758
Ensembl chr 5:179,271,577...179,374,229
JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in ISO (PMID:16901786) UniProt PMID:16901786 NCBI chr11:108,676,566...108,754,372
Ensembl chr11:112,517,693...112,595,585
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chr 1:103,377,815...103,395,118
Ensembl chr 1:102,091,336...102,107,732
JBrowse link
G XRCC4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:3761960|PMID:17713479) MGI PMID:17713479 MGI:3761960 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490
JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (MGI:5007842|PMID:21568942)
(MGI:3613277|PMID:15979950)
MGI PMID:15979950 PMID:21568942 MGI:3613277 MGI:5007842 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314
JBrowse link
response to light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:21076359 RGD:8655612 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
JBrowse link
G CAT catalase ISO RGD PMID:17514533 RGD:9107626 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160
JBrowse link
G CNTF ciliary neurotrophic factor ISO RGD PMID:21076359 RGD:8655612 NCBI chr11:53,876,081...53,882,870
Ensembl chr11:57,336,792...57,341,121
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (MGI:6503588|PMID:32889171) MGI PMID:32889171 MGI:6503588 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5315031|PMID:22411800) MGI PMID:22411800 MGI:5315031 NCBI chr 8:114,489,325...114,803,763
Ensembl chr 8:117,011,919...117,324,851
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 ISO RGD PMID:17591908 RGD:2302146 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808
JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:18708127 RGD:9685740 NCBI chr11:17,788,010...17,936,591
Ensembl chr11:17,472,158...17,517,892
JBrowse link
G KCNC2 potassium voltage-gated channel subfamily C member 2 ISO RGD PMID:18708127 RGD:9685740 NCBI chr12:72,566,924...72,736,270 JBrowse link
response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AANAT aralkylamine N-acetyltransferase ISO RGD PMID:18001324 RGD:2301033 NCBI chr17:70,401,103...70,418,551
Ensembl chr17:75,951,915...75,967,411
JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO transpupillary thermotherapy laser RGD PMID:16885923 RGD:2302304 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
JBrowse link
G BDNF brain derived neurotrophic factor ISO RGD PMID:17640634 RGD:8655603 NCBI chr11:27,618,322...27,687,661
Ensembl chr11:27,520,312...27,589,239
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 acts_upstream_of_or_within
involved_in
ISO (PMID:15038852)
PMID:12397359
RGD
BHF-UCL
UniProt
PMID:12397359 PMID:15038852 RGD:625726 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10471199 RGD:10401879 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726
JBrowse link
G CLU clusterin ISO RGD PMID:11803476 RGD:9062370 NCBI chr 8:26,867,973...26,884,838
Ensembl chr 8:24,070,053...24,083,523
JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISO (MGI:6294193|PMID:29561690) UniProt PMID:29561690 MGI:6294193 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484
JBrowse link
G CRY2 cryptochrome circadian regulator 2 involved_in ISO (PMID:15751956)
(MGI:6294193|PMID:29561690)
CAFA
UniProt
PMID:15751956 PMID:29561690 MGI:6294193 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759
JBrowse link
G DNM2 dynamin 2 ISO RGD PMID:22666495 RGD:9685159 NCBI chr19:10,272,172...10,386,032
Ensembl chr19:10,933,672...11,106,478
JBrowse link
G DRD2 dopamine receptor D2 acts_upstream_of_or_within ISO (MGI:3639799|PMID:16715079) MGI PMID:16715079 MGI:3639799 NCBI chr11:108,289,838...108,357,174
Ensembl chr11:112,132,703...112,198,935
JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:15527789 RGD:2298681 NCBI chr 5:168,121,536...168,124,671
Ensembl chr 5:175,032,803...175,035,960
JBrowse link
G DYNLRB1 dynein light chain roadblock-type 1 ISO RGD PMID:10816553 RGD:633064 NCBI chr20:30,845,447...30,869,776
Ensembl chr20:31,976,941...32,001,199
JBrowse link
G ELK1 ETS transcription factor ELK1 ISO RGD PMID:10383826 RGD:7488912 NCBI chr  X:40,071,433...40,086,518
Ensembl chr  X:47,967,492...47,982,579
JBrowse link
G FECH ferrochelatase acts_upstream_of_or_within ISO (MGI:50545|PMID:1939658) MGI PMID:1939658 MGI:50545 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378
JBrowse link
G FMR1 FMRP translational regulator 1 ISO RGD PMID:15564573 RGD:1601175 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397
JBrowse link
G GJA10 gap junction protein alpha 10 acts_upstream_of_or_within ISO (MGI:3654563|PMID:16820008) MGI PMID:16820008 MGI:3654563 NCBI chr 6:87,774,889...87,776,520
Ensembl chr 6:91,046,601...91,072,335
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19850826 RGD:2325946 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (MGI:1334014|PMID:10097103) RGD
MGI
PMID:3950623 PMID:10097103 MGI:1334014 RGD:1600007 NCBI chr13:94,816,045...94,838,509
Ensembl chr13:113,867,002...113,885,610
JBrowse link
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr19:12,353,760...12,355,598
Ensembl chr19:13,097,931...13,098,974
JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:11146118 RGD:2293791 NCBI chr19:17,755,331...17,757,164 JBrowse link
G KMT2A lysine methyltransferase 2A acts_upstream_of_or_within ISO (MGI:5638946|PMID:25834037) MGI PMID:25834037 MGI:5638946 NCBI chr11:113,273,198...113,364,404 JBrowse link
G LOC100971425 somatotropin ISO RGD PMID:19091612 RGD:2315626 NCBI chr17:58,010,848...58,013,421 JBrowse link
G LOC100971960 unconventional myosin-XV ISO RGD PMID:21479269 RGD:150429616 NCBI chr17:32,661,499...32,723,320 JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO (MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:5431019 NCBI chr 4:78,326,129...78,756,794
Ensembl chr 4:89,059,579...89,392,196
JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr2A:85,589,301...85,595,437
Ensembl chr2A:87,141,857...87,148,322
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 ISO RGD PMID:17640634 RGD:8655603 NCBI chr 9:39,663,986...40,208,770
Ensembl chr 9:84,021,837...84,372,678
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase ISO RGD PMID:15979612 RGD:8694099 NCBI chr 3:9,702,311...9,742,283
Ensembl chr 3:9,940,955...9,947,335
JBrowse link
G OPN4 opsin 4 NOT|acts_upstream_of_or_within ISO (MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:5925970 NCBI chr10:83,082,351...83,095,161 JBrowse link
G PER1 period circadian regulator 1 acts_upstream_of_or_within ISO (PMID:15038852) BHF-UCL PMID:15038852 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391
JBrowse link
G POLG DNA polymerase gamma, catalytic subunit ISO RGD PMID:15979612 RGD:8694099 NCBI chr15:68,008,214...68,028,241
Ensembl chr15:87,214,451...87,234,739
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (MGI:3830801|PMID:19041764) UniProt PMID:19041764 MGI:3830801 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G RHO rhodopsin acts_upstream_of_or_within ISO (MGI:3655007|PMID:16723493) MGI PMID:16723493 MGI:3655007 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO (MGI:3692154|PMID:16221497) MGI PMID:16221497 MGI:3692154 NCBI chr11:203,317...210,135
Ensembl chr11:248,880...255,269
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:17389522 RGD:9585654 NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904
JBrowse link
G SLC1A2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO (MGI:1203466|PMID:9539795) MGI PMID:9539795 MGI:1203466 NCBI chr11:35,223,811...35,392,799
Ensembl chr11:35,107,920...35,265,878
JBrowse link
G SLC1A3 solute carrier family 1 member 3 acts_upstream_of_or_within ISO (MGI:1203466|PMID:9539795) MGI PMID:9539795 MGI:1203466 NCBI chr 5:73,679,841...73,761,591
Ensembl chr 5:78,960,797...79,042,694
JBrowse link
G SLC4A10 solute carrier family 4 member 10 acts_upstream_of_or_within ISO (MGI:3772751|PMID:18165320) MGI PMID:18165320 MGI:3772751 NCBI chr2B:48,917,958...49,278,724
Ensembl chr2B:166,371,645...166,647,554
JBrowse link
G SYNE1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:8700883 RGD:632616 NCBI chr 6:149,936,306...150,454,822
Ensembl chr 6:154,627,904...155,144,076
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:21185915 RGD:5128767 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433
JBrowse link
response to low light intensity stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:1683769 RGD:2326143 NCBI chr 5:67,067,001...67,091,786
Ensembl chr 5:72,116,228...72,141,050
JBrowse link
G PRPH2 peripherin 2 ISO RGD PMID:8320859 RGD:8553226 NCBI chr 6:42,284,818...42,316,150
Ensembl chr 6:43,582,317...43,608,011
JBrowse link
response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15150265) UniProt
MGI
PMID:15150265 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659
JBrowse link
G C10H10orf90 chromosome 10 C10orf90 homolog involved_in ISO (MGI:5285148|PMID:20843368) UniProt PMID:20843368 MGI:5285148 NCBI chr10:122,987,122...123,243,653
Ensembl chr10:127,259,451...127,357,119
JBrowse link
G CASP3 caspase 3 acts_upstream_of_or_within ISO (MGI:3615714|PMID:16469926)
(MGI:3691523|PMID:11092819)
MGI PMID:11092819 PMID:16469926 MGI:3615714 MGI:3691523 NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185
JBrowse link
G CASP7 caspase 7 acts_upstream_of_or_within ISO (MGI:3615714|PMID:16469926) MGI PMID:16469926 MGI:3615714 NCBI chr10:110,273,318...110,324,800
Ensembl chr10:113,707,780...113,758,626
JBrowse link
G CASP9 caspase 9 acts_upstream_of_or_within ISO (MGI:3691523|PMID:11092819) MGI PMID:11092819 MGI:3691523 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266
JBrowse link
G CAT catalase ISO RGD PMID:12592055 RGD:9179775 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23352644) UniProt PMID:23352644 NCBI chr 8:21,854,803...21,870,556
Ensembl chr 8:18,794,027...18,808,571
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G CDKN2D cyclin dependent kinase inhibitor 2D involved_in ISO (PMID:15750620) BHF-UCL PMID:15750620 NCBI chr19:10,118,302...10,120,957 JBrowse link
G CIRBP cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538
G DDB2 damage specific DNA binding protein 2 involved_in ISO (PMID:12732143) UniProt PMID:12732143 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761
JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:18794347) UniProt PMID:18794347 NCBI chr 1:187,603,600...187,672,006
Ensembl chr 1:192,466,408...192,535,071
JBrowse link
G ELANE elastase, neutrophil expressed involved_in ISO (PMID:11928814) UniProt PMID:11928814 NCBI chr19:276,499...280,598 JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (MGI:3692802|PMID:17020410) MGI PMID:17020410 MGI:3692802 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819
JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in ISO (PMID:17509950) UniProt PMID:17509950 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:16678501) UniProt PMID:16678501 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within
ISO (PMID:8710877)
(MGI:3041918|PMID:15082767)
(PMID:16167068)
UniProt
MGI
PMID:8710877 PMID:15082767 PMID:16167068 MGI:3041918 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within
ISO (PMID:16916636)
(MGI:3054497|PMID:15340056), (MGI:3655576|PMID:10843671)
UniProt
MGI
PMID:10843671 PMID:15340056 PMID:16916636 MGI:3054497 MGI:3655576 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in
acts_upstream_of_or_within
ISO (PMID:7664335)
(MGI:3054497|PMID:15340056)
(PMID:12732143)
UniProt
MGI
PMID:7664335 PMID:12732143 PMID:15340056 MGI:3054497 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496
JBrowse link
G HUS1 HUS1 checkpoint clamp component acts_upstream_of_or_within ISO (MGI:2449744|PMID:12529385)
(MGI:2156961|PMID:11790307)
MGI PMID:11790307 PMID:12529385 MGI:2156961 MGI:2449744 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005
JBrowse link
G LOC100985851 upstream stimulatory factor 1 involved_in ISO (MGI:3525429|PMID:15358786) BHF-UCL PMID:15358786 MGI:3525429 NCBI chr 1:136,451,829...136,458,543
Ensembl chr 1:140,365,500...140,371,861
JBrowse link
G MAP2K7 mitogen-activated protein kinase kinase 7 involved_in ISO (PMID:9535930) UniProt PMID:9535930 NCBI chr19:7,205,124...7,215,776
Ensembl chr19:8,057,598...8,066,512
JBrowse link
G MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 involved_in ISO (PMID:9275185) UniProt PMID:9275185 NCBI chr2A:39,286,787...39,474,780
Ensembl chr2A:40,040,497...40,228,109
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:14967141) MGI PMID:14967141 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MEN1 menin 1 involved_in ISO (PMID:16690369) UniProt PMID:16690369 NCBI chr11:60,159,009...60,166,222
Ensembl chr11:63,499,962...63,507,164
JBrowse link
G MSH6 mutS homolog 6 acts_upstream_of_or_within ISO (MGI:2677657|PMID:14632208) MGI PMID:14632208 MGI:2677657 NCBI chr2A:47,901,591...47,926,662
Ensembl chr2A:48,824,350...48,849,779
JBrowse link
G PCLAF PCNA clamp associated factor involved_in ISO (PMID:23000965) UniProt PMID:23000965 NCBI chr15:43,311,115...43,331,979
Ensembl chr15:61,602,830...61,617,303
JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449
JBrowse link
G PML PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:3580934|PMID:15626733) MGI PMID:15626733 MGI:3580934 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in ISO (PMID:24240614), (PMID:24267451) UniProt PMID:24240614 PMID:24267451 NCBI chr 4:176,815,122...176,860,682 JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4822286|PMID:20647423) UniProt PMID:20647423 MGI:4822286 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:2448116|PMID:12509447) MGI PMID:12509447 MGI:2448116 NCBI chr 3:8,832,910...8,918,067
Ensembl chr 3:9,076,500...9,161,585
JBrowse link
G REV1 REV1 DNA directed polymerase involved_in ISO (PMID:11485998) UniProt PMID:11485998 NCBI chr2A:99,808,519...99,897,989
Ensembl chr2A:100,329,475...100,418,678
JBrowse link
G RO60 Ro60, Y RNA binding protein acts_upstream_of_or_within ISO (MGI:5524977|PMID:14680639)
(MGI:2668758|PMID:12788971)
MGI PMID:12788971 PMID:14680639 MGI:2668758 MGI:5524977 NCBI chr 1:168,518,796...168,551,137
Ensembl chr 1:172,811,822...172,838,373
JBrowse link
G RPAIN RPA interacting protein acts_upstream_of_or_within ISO (PMID:16135809) MGI PMID:16135809 NCBI chr17:5,467,978...5,481,219
Ensembl chr17:5,460,277...5,473,568
JBrowse link
G SPRTN SprT-like N-terminal domain involved_in ISO (PMID:22681887), (PMID:22894931), (PMID:22902628) UniProt PMID:22681887 PMID:22894931 PMID:22902628 NCBI chr 1:206,889,897...206,906,047
Ensembl chr 1:211,914,082...211,931,093
JBrowse link
G TIPIN TIMELESS interacting protein acts_upstream_of_or_within ISO (MGI:3706226|PMID:17141802) MGI PMID:17141802 MGI:3706226 NCBI chr15:45,290,350...45,310,335
Ensembl chr15:63,566,463...63,585,717
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:1858868|PMID:10815637), (MGI:3691523|PMID:11092819)
(MGI:3032464|PMID:14744935)
(MGI:2675761|PMID:12952892)
RGD
MGI
PMID:10815637 PMID:11092819 PMID:12952892 PMID:14744935 PMID:17724205 MGI:1858868 MGI:2675761 MGI:3032464 MGI:3691523 RGD:2290562 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G TP53I13 tumor protein p53 inducible protein 13 involved_in ISO (PMID:14767535) UniProt PMID:14767535 NCBI chr17:27,201,464...27,207,347
Ensembl chr17:27,718,175...27,722,447
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5908297|PMID:28351661) MGI PMID:28351661 MGI:5908297 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in ISO (MGI:5009403|PMID:16816390) BHF-UCL PMID:16816390 MGI:5009403 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707
JBrowse link
G TYR tyrosinase ISO RGD PMID:6175546 RGD:8694330 NCBI chr11:84,188,557...84,306,686
Ensembl chr11:87,769,606...87,888,138
JBrowse link
G UACA uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO (MGI:3056865|PMID:15271982) MGI PMID:15271982 MGI:3056865 NCBI chr15:49,607,308...49,711,188
Ensembl chr15:68,375,939...68,477,395
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:1717990) UniProt PMID:1717990 NCBI chr  X:108,606,271...108,617,000
Ensembl chr  X:119,034,235...119,049,655
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in ISO (PMID:1717990) UniProt PMID:1717990 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609
JBrowse link
G UBE4B ubiquitination factor E4B involved_in ISO (PMID:11802788) UniProt PMID:11802788 NCBI chr 1:8,801,707...8,949,465
Ensembl chr 1:10,033,084...10,178,759
JBrowse link
G USP1 ubiquitin specific peptidase 1 involved_in ISO (PMID:18082604) UniProt PMID:18082604 NCBI chr 1:61,694,775...61,710,216
Ensembl chr 1:63,510,196...63,525,446
JBrowse link
G UVSSA UV stimulated scaffold protein A involved_in ISO (PMID:22466610), (PMID:22466611), (PMID:22466612) UniProt PMID:22466610 PMID:22466611 PMID:22466612 NCBI chr 4:1,492,716...1,532,114
Ensembl chr 4:1,373,562...1,413,982
JBrowse link
G XPA XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (MGI:3655576|PMID:10843671) MGI PMID:10843671 MGI:3655576 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254
JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in ISO (PMID:22704558) UniProt PMID:22704558 NCBI chr2B:24,331,731...24,665,652
Ensembl chr2B:139,234,909...139,577,193
JBrowse link
response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18483258) BHF-UCL PMID:18483258 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
JBrowse link
G CCND1 cyclin D1 involved_in ISO (PMID:18483258) BHF-UCL PMID:18483258 NCBI chr11:64,737,006...64,750,353 JBrowse link
G EGFR epidermal growth factor receptor involved_in ISO (PMID:18483258) BHF-UCL PMID:18483258 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
JBrowse link
response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1330635|PMID:10200548) MGI PMID:10200548 MGI:1330635 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:1859141|PMID:10850428), (MGI:3699047|PMID:17145777) MGI PMID:10850428 PMID:17145777 MGI:1859141 MGI:3699047 NCBI chr10:44,703,720...44,784,948 JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (MGI:3590574|PMID:12660172) MGI PMID:12660172 MGI:3590574 NCBI chr21:25,695,582...25,702,689 JBrowse link
G IL12A interleukin 12A involved_in ISO (PMID:8992506) UniProt PMID:8992506 NCBI chr 3:157,011,675...157,019,897
Ensembl chr 3:165,061,505...165,068,666
JBrowse link
G IL12B interleukin 12B involved_in ISO (PMID:8992506) UniProt PMID:8992506 NCBI chr 5:154,706,467...154,722,231
Ensembl chr 5:161,325,303...161,335,381
JBrowse link
G IVL involucrin involved_in ISO (PMID:16639001) UniProt PMID:16639001 NCBI chr 1:128,254,139...128,256,893 JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within ISO (MGI:3487309|PMID:15166087) MGI PMID:15166087 MGI:3487309 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:15616591) UniProt PMID:15616591 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
JBrowse link
G TP53 tumor protein p53 ISO RGD PMID:22559303 RGD:8547754 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (MGI:3034118|PMID:15010313) MGI PMID:15010313 MGI:3034118 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377
JBrowse link
response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 ISO RGD PMID:19520675 RGD:2316118 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211
JBrowse link
G BCL3 BCL3 transcription coactivator involved_in ISO (PMID:16384933) UniProt PMID:16384933 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005
JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:1203345|PMID:9660919) MGI PMID:9660919 MGI:1203345 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332
JBrowse link
G DCUN1D3 defective in cullin neddylation 1 domain containing 3 involved_in ISO (PMID:18823379) UniProt PMID:18823379 NCBI chr16:17,508,722...17,554,042
Ensembl chr16:20,886,665...20,931,611
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in ISO (PMID:17208056) UniProt PMID:17208056 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182
JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (MGI:3590574|PMID:12660172) MGI PMID:12660172 MGI:3590574 NCBI chr21:25,695,582...25,702,689 JBrowse link
G MAP3K4 mitogen-activated protein kinase kinase kinase 4 involved_in ISO (PMID:9305639) UniProt PMID:9305639 NCBI chr 6:158,937,424...159,062,550
Ensembl chr 6:163,948,122...164,073,264
JBrowse link
G POLH DNA polymerase eta involved_in ISO (PMID:17563354) UniProt PMID:17563354 NCBI chr 6:43,168,195...43,205,811
Ensembl chr 6:44,462,225...44,495,704
JBrowse link
G WRN WRN RecQ like helicase involved_in ISO (PMID:17563354) UniProt PMID:17563354 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855
JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:18026119)
(MGI:5009388|PMID:18026119)
UniProt PMID:18026119 MGI:5009388 NCBI chr14:80,859,491...80,903,651 JBrowse link
response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:9269316 RGD:2306948 NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779
JBrowse link
G BLM BLM RecQ like helicase involved_in ISO (PMID:11309417) UniProt PMID:11309417 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864
JBrowse link
G BRCA2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:3833141|PMID:16859999)
(MGI:1100157|PMID:9398843)
(MGI:1203345|PMID:9660919)
MGI PMID:9398843 PMID:9660919 PMID:16859999 MGI:1100157 MGI:1203345 MGI:3833141 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332
JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 acts_upstream_of_or_within ISO (PMID:14636569) MGI PMID:14636569 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669
JBrowse link
G CASP3 caspase 3 ISO RGD PMID:18239382 RGD:2293328 NCBI chr 4:176,793,190...176,815,023
Ensembl chr 4:189,018,422...189,040,185
JBrowse link
G CCND1 cyclin D1 ISO RGD PMID:17148264 RGD:1601086 NCBI chr11:64,737,006...64,750,353 JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A ISO RGD PMID:18413982 RGD:8662408 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:17549535 RGD:8661655 NCBI chr12:40,726,137...40,757,690 JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950) MGI PMID:15979950 MGI:3613277 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950), (MGI:3699047|PMID:17145777) MGI PMID:15979950 PMID:17145777 MGI:3613277 MGI:3699047 NCBI chr10:44,703,720...44,784,948 JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within ISO (MGI:3699047|PMID:17145777) MGI PMID:17145777 MGI:3699047 NCBI chr 5:53,053,712...53,131,563
Ensembl chr 5:54,693,987...54,765,496
JBrowse link
G FGA fibrinogen alpha chain ISO RGD PMID:4170424 RGD:11040910 NCBI chr 4:146,949,680...146,957,291 JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:15161688 RGD:9068912 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G IL7 interleukin 7 ISO RGD PMID:15799696 RGD:10402940 NCBI chr 8:75,254,166...75,337,373
Ensembl chr 8:76,895,095...76,966,918
JBrowse link
G KARS1 lysyl-tRNA synthetase 1 ISO RGD PMID:4001316 RGD:12910553 NCBI chr16:56,196,867...56,216,909
Ensembl chr16:75,545,002...75,565,043
JBrowse link
G LIG4 DNA ligase 4 involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555
JBrowse link
G LRP2 LDL receptor related protein 2 ISO RGD PMID:12121845 RGD:1641839 NCBI chr2B:56,407,871...56,640,471
Ensembl chr2B:173,873,767...174,103,697
JBrowse link
G MSH2 mutS homolog 2 acts_upstream_of_or_within ISO (MGI:2667543|PMID:12687013) MGI PMID:12687013 MGI:2667543 NCBI chr2A:47,524,468...47,602,376
Ensembl chr2A:48,447,207...48,554,461
JBrowse link
G PDXK pyridoxal kinase ISO RGD PMID:2928487 RGD:2303016 NCBI chr21:29,977,286...30,021,266
Ensembl chr21:43,273,237...43,313,637
JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449
JBrowse link
G RAD51 RAD51 recombinase ISO RGD PMID:17148264 RGD:1601086 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207
JBrowse link
G THBD thrombomodulin ISO RGD PMID:12057911 RGD:634507 NCBI chr20:22,992,341...22,996,415
Ensembl chr20:23,345,917...23,347,812
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5440773|PMID:22821713)
(MGI:3032953|PMID:11884608)
RGD
MGI
PMID:11884608 PMID:17699727 PMID:22821713 MGI:3032953 MGI:5440773 RGD:2290567 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G VWF von Willebrand factor ISO RGD PMID:8811296 RGD:11079207 NCBI chr12:6,073,836...6,249,806
Ensembl chr12:5,990,612...6,165,153
JBrowse link
G XRCC2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950) MGI PMID:15979950 MGI:3613277 NCBI chr 7:144,229,031...144,256,854
Ensembl chr 7:156,378,685...156,406,516
JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within
ISO (PMID:9242410)
(MGI:1913213|PMID:9875844)
UniProt
MGI
PMID:9242410 PMID:9875844 MGI:1913213 NCBI chr 5:31,927,463...32,202,394
Ensembl chr 5:32,246,320...32,521,490
JBrowse link
G XRRA1 X-ray radiation resistance associated 1 involved_in ISO (PMID:12908878) UniProt PMID:12908878 NCBI chr11:69,908,897...70,013,765
Ensembl chr11:73,211,501...73,319,141
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAT1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568
JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chr10:83,082,351...83,095,161 JBrowse link
G PCP2 Purkinje cell protein 2 acts_upstream_of_or_within ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chr19:6,921,350...6,923,618
Ensembl chr19:7,776,331...7,779,241
JBrowse link
G RHO rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chr 3:126,586,510...126,593,028
Ensembl chr 3:133,938,419...133,944,928
JBrowse link
short-day photoperiodism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPY neuropeptide Y ISO RGD PMID:19490367 RGD:6480663 NCBI chr 7:24,963,056...24,970,803
Ensembl chr 7:24,568,041...24,574,657
JBrowse link
UV protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAT catalase involved_in ISO (PMID:16644728), (PMID:17053817) UniProt PMID:16644728 PMID:17053817 NCBI chr11:34,413,253...34,446,831
Ensembl chr11:34,289,603...34,323,160
JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (MGI:1342943|PMID:10454634)
(MGI:63544|PMID:8275084)
(MGI:3692264|PMID:16682947)
MGI PMID:8275084 PMID:10454634 PMID:16682947 MGI:1342943 MGI:3692264 MGI:63544 NCBI chr19:42,356,039...42,427,754
Ensembl chr19:50,951,674...50,968,430
JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (MGI:1267106|PMID:9651581)
(PMID:2835663)
MGI PMID:2835663 PMID:9651581 MGI:1267106 NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819
JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO (MGI:50153|PMID:1747940) MGI PMID:1747940 MGI:50153 NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372
JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within ISO (MGI:3027419|PMID:14729965) MGI PMID:14729965 MGI:3027419 NCBI chr16:12,848,334...12,880,480
Ensembl chr16:14,272,417...14,304,496
JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease acts_upstream_of_or_within ISO (MGI:82906|PMID:8703115)
(PMID:7510366)
(MGI:77034|PMID:7510366)
MGI PMID:7510366 PMID:8703115 MGI:77034 MGI:82906 NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182
JBrowse link
G GPX1 glutathione peroxidase 1 involved_in ISO (PMID:17097614) BHF-UCL PMID:17097614 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826
JBrowse link
G MFAP4 microfibril associated protein 4 involved_in ISO (PMID:22355679) BHF-UCL PMID:22355679 NCBI chr17:31,725,732...31,729,528
Ensembl chr17:36,890,778...36,893,230
JBrowse link
G SDF4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427
G XPA XPA, DNA damage recognition and repair factor involved_in ISO (PMID:1601884) CAFA PMID:1601884 NCBI chr 9:68,726,723...68,788,049
Ensembl chr 9:96,886,795...96,909,254
JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR5 actin related protein 5 involved_in ISO (PMID:20855601) UniProt PMID:20855601 NCBI chr20:35,073,297...35,097,955
Ensembl chr20:36,181,343...36,204,996
JBrowse link
G CUL4B cullin 4B involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chr  X:109,798,279...109,870,469
Ensembl chr  X:119,985,116...120,034,702
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805
JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chr11:47,161,345...47,185,526
Ensembl chr11:47,714,723...47,738,761
JBrowse link
G INO80 INO80 complex ATPase subunit involved_in ISO (PMID:20855601) UniProt PMID:20855601 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311
JBrowse link
G LOC100975117 histone H2A type 3 involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chr 1:203,858,974...203,860,255
Ensembl chr 1:209,070,117...209,070,509
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:20670893) CACAO PMID:20670893 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:8077226)
(MGI:5427285|PMID:22431748)
CACAO
MGI
PMID:8077226 PMID:22431748 MGI:5427285 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377
JBrowse link
UV-damage excision repair, DNA incision term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPC XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (MGI:3697767|PMID:17049932) MGI PMID:17049932 MGI:3697767 NCBI chr 3:14,063,499...14,097,023
Ensembl chr 3:14,403,958...14,437,377
JBrowse link
visual behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLRB1 dynein light chain roadblock-type 1 involved_in ISO PMID:10816553 UniProt PMID:10816553 RGD:633064 NCBI chr20:30,845,447...30,869,776
Ensembl chr20:31,976,941...32,001,199
JBrowse link
G SLC1A2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO (MGI:3608234|PMID:16197522) MGI PMID:16197522 MGI:3608234 NCBI chr11:35,223,811...35,392,799
Ensembl chr11:35,107,920...35,265,878
JBrowse link
visual learning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:5774886|PMID:27030769) ARUK-UCL PMID:27030769 MGI:5774886 NCBI chr19:62,811...77,897
Ensembl chr19:1,018,095...1,042,104
JBrowse link
G ABCC8 ATP binding cassette subfamily C member 8 ISO RGD PMID:24114458 RGD:10003028 NCBI chr11:17,447,564...17,531,513
Ensembl chr11:17,133,063...17,216,870
JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within