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ONTOLOGY REPORT - ANNOTATIONS

Term:oligosaccharide catabolic process
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Accession:GO:0009313 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide breakdown;   oligosaccharide catabolism;   oligosaccharide degradation
 narrow_synonym: multicellular organismal oligosaccharide catabolic process
 alt_id: GO:0051689

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oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbs chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chrNW_004936608:1,048,696...1,064,383
Ensembl chrNW_004936608:1,048,922...1,068,761 		JBrowse link
G Gm2a GM2 ganglioside activator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1203907|PMID:9584189) MGI
Ensembl		 PMID:9584189 GO_REF:0000107 MGI:1203907 NCBI chrNW_004936647:4,126,524...4,140,800
Ensembl chrNW_004936647:4,126,577...4,140,786 		JBrowse link
G Hexb hexosaminidase subunit beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1331265|PMID:10021458), (MGI:3573807|PMID:15748167) MGI
Ensembl		 PMID:10021458 PMID:15748167 GO_REF:0000107 MGI:1331265 MGI:3573807 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Man2b1 mannosidase alpha class 2B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,776,212...1,793,651
Ensembl chrNW_004936659:1,774,773...1,793,670 		JBrowse link
G Man2b2 mannosidase alpha class 2B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:18,543,541...18,571,002
Ensembl chrNW_004936477:18,543,484...18,571,014 		JBrowse link
G Man2c1 mannosidase alpha class 2C member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,193,314...34,206,010
Ensembl chrNW_004936471:34,193,316...34,204,656 		JBrowse link
G Manba mannosidase beta involved_in ISO (MGI:57603|PMID:3447593) MGI PMID:3447593 MGI:57603 NCBI chrNW_004936520:616,762...715,010
Ensembl chrNW_004936520:616,826...713,793 		JBrowse link
G Neu1 neuraminidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,683,283...1,687,130
Ensembl chrNW_004936727:1,683,204...1,688,883 		JBrowse link
G Neu2 neuraminidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:4,177,085...4,179,692
Ensembl chrNW_004936525:4,177,085...4,179,692 		JBrowse link
G Neu3 neuraminidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:3,897,511...3,915,013
Ensembl chrNW_004936498:3,897,485...3,910,115 		JBrowse link
G Neu4 neuraminidase 4 involved_in ISO (PMID:15213228) UniProt PMID:15213228 NCBI chrNW_004936745:172,983...175,470 JBrowse link
cellobiose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lct lactase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,064,822...40,108,423
Ensembl chrNW_004936469:40,064,822...40,107,447 		JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idnk IDNK gluconokinase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936828:512,081...524,032
Ensembl chrNW_004936828:512,161...523,211 		JBrowse link
lactose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lct lactase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,064,822...40,108,423
Ensembl chrNW_004936469:40,064,822...40,107,447 		JBrowse link
maltose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO (PMID:18036614), (PMID:22058037), (PMID:27480812) UniProt PMID:18036614 PMID:22058037 PMID:27480812 NCBI chrNW_004936592:5,778,487...5,841,770 JBrowse link
sucrose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Si sucrase-isomaltase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936707:1,153,538...1,228,220
Ensembl chrNW_004936707:1,153,538...1,228,220 		JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,688,086...3,702,067
Ensembl chrNW_004936542:3,688,247...3,702,033 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15080
    metabolic process 9016
      primary metabolic process 7765
        carbohydrate metabolic process 504
          oligosaccharide metabolic process 43
            oligosaccharide catabolic process 16
              6-alpha-maltosylglucose catabolic process 0
              D-gluconate catabolic process 1
              cellodextrin catabolic process + 0
              cellooligosaccharide catabolic process + 0
              cellotriose catabolic process + 0
              cyclodextrin catabolic process + 0
              disaccharide catabolic process + 4
              maltoheptaose catabolic process 0
              raffinose catabolic process + 0
paths to the root