Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide catabolic process
go back to main search page
Accession:GO:0009313 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide breakdown;   oligosaccharide catabolism;   oligosaccharide degradation
 narrow_synonym: multicellular organismal oligosaccharide catabolic process
 alt_id: GO:0051689


show annotations for term's descendants           Sort by:
 
oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbs chitobiase IDA RGD PMID:2751306 RGD:2301430 NCBI chr 2:252,305,874...252,320,387
Ensembl chr 2:252,305,874...252,320,387
JBrowse link
G Gm2a GM2 ganglioside activator acts_upstream_of_or_within ISO MGI:1861930 (MGI:1203907|PMID:9584189) RGD PMID:9584189 MGI:1203907 NCBI chr10:40,438,394...40,450,927
Ensembl chr10:40,438,356...40,450,930
JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857438 (MGI:1331265|PMID:10021458), (MGI:3573807|PMID:15748167)
Ensembl
RGD
PMID:10021458 PMID:15748167 GO_REF:0000107 MGI:1331265 MGI:3573807 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Man2c1 mannosidase, alpha, class 2C, member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:61,805,697...61,816,800
Ensembl chr 8:61,805,677...61,816,800
JBrowse link
G Neu1 neuraminidase 1 involved_in IEA
ISS
IBA
ISO
GO_REF:0000107
GO_REF:0000024
PMID:21873635
(PMID:8985184)
Ensembl
UniProt
RGD
PMID:8985184, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr20:4,610,995...4,615,258
Ensembl chr20:4,610,995...4,615,247
JBrowse link
G Neu2 neuraminidase 2 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:1354405|PMID:10713120)
GO_REF:0000024
(PMID:14613940), (PMID:22228546)
RGD
UniProt
PMID:10713120 PMID:14613940 PMID:22228546, PMID:21873635 GO_REF:0000024 MGI:1354405, RGD:13792537 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
G Neu3 neuraminidase 3 involved_in IBA
ISO
PMID:21873635
(PMID:10861246)
RGD PMID:10861246, PMID:21873635 RGD:13792537 NCBI chr 1:164,803,574...164,814,777
Ensembl chr 1:164,803,574...164,814,651
JBrowse link
G Neu4 neuraminidase 4 involved_in IBA
ISO
PMID:21873635
(PMID:15213228)
RGD PMID:15213228, PMID:21873635 RGD:13792537 NCBI chr 9:101,284,902...101,290,558
Ensembl chr 9:101,284,902...101,290,558
Ensembl chr 9:101,284,902...101,290,558
JBrowse link
cellular oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 involved_in ISO (PMID:26193330) RGD PMID:26193330 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Neu2 neuraminidase 2 involved_in ISO
IEA
(PMID:26193330)
GO_REF:0000107
RGD
Ensembl
PMID:26193330 GO_REF:0000107 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase involved_in ISO (PMID:9427547) RGD PMID:9427547 NCBI chr 8:48,983,802...48,998,072
Ensembl chr 8:48,983,802...48,997,191
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    metabolic process 11882
      primary metabolic process 10639
        carbohydrate metabolic process 628
          oligosaccharide metabolic process 41
            oligosaccharide catabolic process 10
              6-alpha-maltosylglucose catabolic process 0
              cellodextrin catabolic process + 0
              cellooligosaccharide catabolic process + 0
              cellotriose catabolic process + 0
              cellular oligosaccharide catabolic process 2
              cyclodextrin catabolic process + 0
              disaccharide catabolic process + 1
              lipooligosaccharide catabolic process 0
              maltoheptaose catabolic process 0
              raffinose catabolic process + 0
paths to the root