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ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide catabolic process
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Accession:GO:0009313 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide breakdown;   oligosaccharide catabolism;   oligosaccharide degradation
 narrow_synonym: multicellular organismal oligosaccharide catabolic process
 alt_id: GO:0051689



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oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbs chitobiase IDA RGD PMID:2751306 RGD:2301430 NCBI chr 2:235,340,520...235,355,091
Ensembl chr 2:235,340,547...235,355,091
JBrowse link
G Gm2a GM2 ganglioside activator acts_upstream_of_or_within ISO MGI:1861930 (MGI:1203907|PMID:9584189) RGD PMID:9584189 MGI:1203907 NCBI chr10:39,219,221...39,231,756
Ensembl chr10:39,219,243...39,231,757
JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857438 (MGI:1331265|PMID:10021458), (MGI:3573807|PMID:15748167)
Ensembl
RGD
PMID:10021458 PMID:15748167 GO_REF:0000107 MGI:1331265 MGI:3573807 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
JBrowse link
G Man2c1 mannosidase, alpha, class 2C, member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:57,537,879...57,549,691
Ensembl chr 8:57,537,321...57,549,690
JBrowse link
G Neu1 neuraminidase 1 involved_in IEA
ISS
IBA
ISO
GO_REF:0000107
GO_REF:0000024
PMID:21873635
(PMID:8985184)
Ensembl
UniProt
RGD
PMID:8985184 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr20:3,897,480...3,901,745
Ensembl chr20:3,897,480...3,901,745
JBrowse link
G Neu2 neuraminidase 2 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:1354405|PMID:10713120)
GO_REF:0000024
(PMID:14613940), (PMID:22228546)
RGD
UniProt
PMID:10713120 PMID:14613940 PMID:22228546 PMID:21873635 GO_REF:0000024 MGI:1354405, RGD:13792537 NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355
JBrowse link
G Neu3 neuraminidase 3 involved_in IBA
ISO
PMID:21873635
(PMID:10861246)
RGD PMID:10861246 PMID:21873635 RGD:13792537 NCBI chr 1:154,137,732...154,148,879
Ensembl chr 1:154,050,855...154,148,813
JBrowse link
G Neu4 neuraminidase 4 involved_in IBA
ISO
PMID:21873635
(PMID:15213228)
RGD PMID:15213228 PMID:21873635 RGD:13792537 NCBI chr 9:94,396,920...94,402,576
Ensembl chr 9:94,396,920...94,402,576
JBrowse link
cellular oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 involved_in ISO (PMID:26193330) RGD PMID:26193330 NCBI chr14:60,575,368...60,662,952
Ensembl chr14:60,574,976...60,721,653
JBrowse link
G Neu2 neuraminidase 2 involved_in ISO
IEA
(PMID:26193330)
GO_REF:0000107
RGD
Ensembl
PMID:26193330 GO_REF:0000107 NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355
JBrowse link
maltose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO (PMID:18036614), (PMID:22058037), (PMID:27480812) RGD PMID:18036614 PMID:22058037 PMID:27480812 NCBI chr 4:69,624,024...69,715,782
Ensembl chr 4:69,446,150...69,692,715
JBrowse link
sucrose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Si sucrase-isomaltase involved_in ISO (PMID:27480812) RGD PMID:27480812 NCBI chr 2:157,505,893...157,586,228
Ensembl chr 2:157,506,342...157,585,260
JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase involved_in ISO (PMID:9427547) RGD PMID:9427547 NCBI chr 8:44,990,182...45,003,881
Ensembl chr 8:44,990,182...45,003,540
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      primary metabolic process 10535
        carbohydrate metabolic process 625
          oligosaccharide metabolic process 43
            oligosaccharide catabolic process 12
              6-alpha-maltosylglucose catabolic process 0
              cellodextrin catabolic process + 0
              cellooligosaccharide catabolic process + 0
              cellotriose catabolic process + 0
              cellular oligosaccharide catabolic process 2
              cyclodextrin catabolic process + 0
              disaccharide catabolic process + 3
              lipooligosaccharide catabolic process 0
              maltoheptaose catabolic process 0
              raffinose catabolic process + 0
paths to the root