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ONTOLOGY REPORT - ANNOTATIONS

Term:oligosaccharide catabolic process
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Accession:GO:0009313 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide breakdown;   oligosaccharide catabolism;   oligosaccharide degradation
 narrow_synonym: multicellular organismal oligosaccharide catabolic process
 alt_id: GO:0051689


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oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbs chitobiase involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:2751306 PMID:21873635 RGD:2301430, RGD:13792537 NCBI chr 2:235,340,520...235,355,091
Ensembl chr 2:235,340,547...235,355,091 		JBrowse link
G Gba3 glucosylceramidase beta 3 involved_in ISO (PMID:26193330) RGD PMID:26193330 NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653 		JBrowse link
G Gm2a ganglioside GM2 activator acts_upstream_of_or_within ISO MGI:1861930 (MGI:1203907|PMID:9584189) RGD PMID:9584189 MGI:1203907 NCBI chr10:39,219,221...39,231,756
Ensembl chr10:39,219,243...39,231,757 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857438 (MGI:1331265|PMID:10021458), (MGI:3573807|PMID:15748167)		 Ensembl
RGD		 PMID:10021458 PMID:15748167 GO_REF:0000107 MGI:1331265 MGI:3573807 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223 		JBrowse link
G Man2b1 mannosidase, alpha, class 2B, member 1 involved_in ISO (MGI:1096270|PMID:9305783) RGD PMID:9305783 MGI:1096270 NCBI chr19:23,055,092...23,074,398
Ensembl chr19:23,055,097...23,074,389 		JBrowse link
G Man2b2 mannosidase, alpha, class 2B, member 2 involved_in ISO (MGI:6269084|PMID:29773673) RGD PMID:29773673 MGI:6269084 NCBI chr14:73,969,079...73,994,089
Ensembl chr14:73,969,003...74,004,281 		JBrowse link
G Man2c1 mannosidase, alpha, class 2C, member 1 involved_in ISO
IBA
IEA		 (MGI:3692682|PMID:16904268)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:16904268 PMID:21873635 GO_REF:0000107 MGI:3692682, RGD:13792537 NCBI chr 8:57,537,879...57,549,691
Ensembl chr 8:57,537,321...57,549,690 		JBrowse link
G Manba mannosidase beta involved_in ISO (MGI:57603|PMID:3447593) RGD PMID:3447593 MGI:57603 NCBI chr 2:223,910,432...224,002,988
Ensembl chr 2:223,910,432...224,002,983 		JBrowse link
G Neu1 neuraminidase 1 involved_in IEA
ISS
IBA
ISO		 GO_REF:0000107
GO_REF:0000024
PMID:21873635
(PMID:8985184)		 Ensembl
UniProt
RGD		 PMID:8985184 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr20:3,897,480...3,901,745
Ensembl chr20:3,897,480...3,901,745 		JBrowse link
G Neu2 neuraminidase 2 involved_in IBA
IEA
ISO
ISS		 PMID:21873635
GO_REF:0000107
(PMID:14613940), (PMID:22228546), (PMID:26193330)
(MGI:1354405|PMID:10713120)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10713120 PMID:14613940 PMID:22228546 PMID:26193330 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1354405, RGD:13792537 NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355 		JBrowse link
G Neu3 neuraminidase 3 involved_in IBA
ISO		 PMID:21873635
(PMID:10861246)		 RGD PMID:10861246 PMID:21873635 RGD:13792537 NCBI chr 1:154,137,732...154,148,879
Ensembl chr 1:154,050,855...154,148,813 		JBrowse link
G Neu4 neuraminidase 4 involved_in IBA
ISO		 PMID:21873635
(PMID:15213228)		 RGD PMID:15213228 PMID:21873635 RGD:13792537 NCBI chr 9:94,396,920...94,402,576
Ensembl chr 9:94,396,920...94,402,576 		JBrowse link
cellobiose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lct lactase involved_in IDA
ISO
IEA		 PMID:4752949
(PMID:3929764)
GO_REF:0000107		 RGD
Ensembl		 PMID:3929764 PMID:4752949 GO_REF:0000107, RGD:151356630 NCBI chr13:39,781,929...39,824,456
Ensembl chr13:39,781,929...39,824,456 		JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idnk Idnk, gluconokinase involved_in IEA
IBA		 GO_REF:0000041
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr17:6,483,575...6,490,780
Ensembl chr17:6,483,576...6,490,905 		JBrowse link
G Pgd phosphogluconate dehydrogenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:159,582,746...159,598,945
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
lactose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lct lactase involved_in IDA
IEA
ISO		 PMID:4752949
GO_REF:0000107
(PMID:12594539), (PMID:3929764), (PMID:9762914)		 Ensembl
RGD		 PMID:3929764 PMID:9762914 PMID:12594539 PMID:4752949 GO_REF:0000107, RGD:151356630 NCBI chr13:39,781,929...39,824,456
Ensembl chr13:39,781,929...39,824,456 		JBrowse link
maltose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO (PMID:18036614), (PMID:22058037), (PMID:27480812) RGD PMID:18036614 PMID:22058037 PMID:27480812 NCBI chr 4:69,441,626...69,602,068
Ensembl chr 4:69,446,150...69,692,715 		JBrowse link
sucrose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Si sucrase-isomaltase involved_in ISO
IEA		 (PMID:27480812)
GO_REF:0000107		 RGD
Ensembl		 PMID:27480812 GO_REF:0000107 NCBI chr 2:157,505,893...157,586,228
Ensembl chr 2:157,506,342...157,585,260 		JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase involved_in ISO
IBA		 (PMID:9427547)
PMID:21873635		 RGD PMID:9427547 PMID:21873635 RGD:13792537 NCBI chr 8:44,990,182...45,003,881
Ensembl chr 8:44,990,182...45,003,540 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      primary metabolic process 9986
        carbohydrate metabolic process 617
          oligosaccharide metabolic process 54
            oligosaccharide catabolic process 18
              6-alpha-maltosylglucose catabolic process 0
              D-gluconate catabolic process 2
              cellodextrin catabolic process + 0
              cellooligosaccharide catabolic process + 0
              cellotriose catabolic process + 0
              cyclodextrin catabolic process + 0
              disaccharide catabolic process + 4
              maltoheptaose catabolic process 0
              raffinose catabolic process + 0
paths to the root