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ONTOLOGY REPORT - ANNOTATIONS

Term:oligosaccharide metabolic process
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Accession:GO:0009311 term browser browse the term
Definition:The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide metabolism
 narrow_synonym: multicellular organismal oligosaccharide metabolic process
 alt_id: GO:0051690


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oligosaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut4 fucosyltransferase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:14,659,755...14,663,418
Ensembl chr 9:14,659,616...14,663,689 		JBrowse link
G Gla galactosidase, alpha involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:133,488,912...133,501,707
Ensembl chr  X:133,488,898...133,501,874 		JBrowse link
G Mogs mannosyl-oligosaccharide glucosidase involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:83,092,477...83,095,883
Ensembl chr 6:83,092,477...83,095,879 		JBrowse link
G Naga N-acetyl galactosaminidase, alpha involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:82,213,746...82,222,983
Ensembl chr15:82,213,733...82,223,126 		JBrowse link
G St6gal2 beta galactoside alpha 2,6 sialyltransferase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:55,752,071...55,821,582
Ensembl chr17:55,752,383...55,821,582 		JBrowse link
G St6galnac3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:152,903,911...153,430,804
Ensembl chr 3:152,903,903...153,430,811 		JBrowse link
G St6galnac4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:32,477,100...32,489,710
Ensembl chr 2:32,477,107...32,489,710 		JBrowse link
G St6galnac5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:152,525,522...152,687,847
Ensembl chr 3:152,522,718...152,687,883 		JBrowse link
G St6galnac6 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:32,489,721...32,510,821
Ensembl chr 2:32,489,721...32,510,818 		JBrowse link
G St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:142,767,267...142,935,247
Ensembl chr 6:142,767,271...142,910,178 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:73,588,867...73,663,408
Ensembl chr 7:73,588,867...73,663,438 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:64,387,430...64,409,217
Ensembl chr18:64,387,430...64,412,682 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:95,515,407...95,595,473
Ensembl chr 1:95,515,407...95,595,296 		JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:77,273,529...77,343,146
Ensembl chr18:77,273,535...77,346,467 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IDA
IBA		 (MGI:2182536|PMID:11980897) BHF-UCL
GO_Central		 PMID:11980897 GO_REF:0000033 MGI:2182536 NCBI chr 2:13,659,745...13,798,659
Ensembl chr 2:13,655,832...13,798,875 		JBrowse link
cellobiose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lct lactase involved_in ISO MGI GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 1:128,212,493...128,256,055
Ensembl chr 1:128,212,493...128,256,055 		JBrowse link
cyclodextrin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within IMP (PMID:21697390) MGI PMID:21697390 NCBI chr18:12,322,751...12,369,851
Ensembl chr18:12,322,749...12,369,457 		JBrowse link
lactose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 acts_upstream_of_or_within
involved_in		 IMP (PMID:9155011) MGI PMID:9155011 NCBI chr 4:40,804,602...40,855,711
Ensembl chr 4:40,804,602...40,854,005 		JBrowse link
G Lalba lactalbumin, alpha involved_in IMP (PMID:8022817) MGI PMID:8022817 NCBI chr15:98,378,281...98,380,827
Ensembl chr15:98,378,281...98,380,602 		JBrowse link
lactose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lct lactase involved_in ISO MGI GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 1:128,212,493...128,256,055
Ensembl chr 1:128,212,493...128,256,055 		JBrowse link
maltose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgam maltase-glucoamylase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:40,605,765...40,746,057
Ensembl chr 6:40,605,765...40,746,057 		JBrowse link
oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase involved_in IDA (PMID:11278752) MGI PMID:11278752 NCBI chr 2:26,732,508...26,754,973
Ensembl chr 2:26,732,515...26,754,991 		JBrowse link
G B3galnt1 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 acts_upstream_of_or_within IDA (PMID:9417047) MGI PMID:9417047 NCBI chr 3:69,481,252...69,506,305
Ensembl chr 3:69,481,491...69,506,293 		JBrowse link
G B3galt1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:9417047) MGI PMID:9417047 GO_REF:0000119 MGI:4834177 NCBI chr 2:67,395,528...67,953,226
Ensembl chr 2:67,396,215...67,953,033 		JBrowse link
G B3galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 acts_upstream_of_or_within IDA (PMID:9417047) MGI PMID:9417047 NCBI chr 1:143,516,435...143,525,675
Ensembl chr 1:143,516,402...143,530,352 		JBrowse link
G B4galt1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 involved_in
acts_upstream_of_or_within		 ISO
IDA		 (PMID:9813328) MGI PMID:9813328 GO_REF:0000119 MGI:4834177 NCBI chr 4:40,804,602...40,855,711
Ensembl chr 4:40,804,602...40,854,005 		JBrowse link
G Fut1 fucosyltransferase 1 involved_in IMP (PMID:11713270) MGI PMID:11713270 NCBI chr 7:45,266,862...45,270,483
Ensembl chr 7:45,266,713...45,270,483 		JBrowse link
G Fut10 fucosyltransferase 10 involved_in IDA (PMID:23986452) MGI PMID:23986452 NCBI chr 8:31,677,342...31,757,310
Ensembl chr 8:31,677,359...31,751,766 		JBrowse link
G Fut2 fucosyltransferase 2 involved_in IDA (PMID:11323419) MGI PMID:11323419 NCBI chr 7:45,298,015...45,315,818
Ensembl chr 7:45,298,015...45,315,818 		JBrowse link
G Fut9 fucosyltransferase 9 involved_in IMP (PMID:23986452) MGI PMID:23986452 NCBI chr 4:25,609,333...25,800,003
Ensembl chr 4:25,609,332...25,800,244 		JBrowse link
G Mgat2 mannoside acetylglucosaminyltransferase 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:69,230,932...69,233,547
Ensembl chr12:69,230,931...69,233,544 		JBrowse link
G Mpdu1 mannose-P-dolichol utilization defect 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:69,547,523...69,553,475
Ensembl chr11:69,547,523...69,553,468 		JBrowse link
G Sec1 secretory blood group 1 involved_in IDA (PMID:11323419) MGI PMID:11323419 NCBI chr 7:45,327,110...45,343,825
Ensembl chr 7:45,327,110...45,343,826 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:111,646,520...111,699,132
Ensembl chr 8:111,646,554...111,699,112 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:34,957,872...35,028,160
Ensembl chr 9:34,957,872...35,030,564 		JBrowse link
G St6galnac1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:10788794) MGI
GO_Central		 PMID:10788794 GO_REF:0000033 NCBI chr11:116,655,851...116,666,333
Ensembl chr11:116,655,851...116,666,333 		JBrowse link
G St6galnac5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IDA (MGI:5284811|PMID:12668675) BHF-UCL PMID:12668675 MGI:5284811 NCBI chr 3:152,525,522...152,687,847
Ensembl chr 3:152,522,718...152,687,883 		JBrowse link
G St6galnac6 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IDA (MGI:5284811|PMID:12668675) BHF-UCL PMID:12668675 MGI:5284811 NCBI chr 2:32,489,721...32,510,821
Ensembl chr 2:32,489,721...32,510,818 		JBrowse link
oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbs chitobiase involved_in ISO
IBA		 RGD
MGI
GO_Central		 PMID:2751306 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2301430 NCBI chr 3:146,156,204...146,171,604
Ensembl chr 3:146,155,550...146,171,604 		JBrowse link
G Gm2a GM2 ganglioside activator protein acts_upstream_of_or_within IMP (PMID:9584189) MGI PMID:9584189 NCBI chr11:54,988,811...55,003,855
Ensembl chr11:54,988,941...55,003,855 		JBrowse link
G Hexb hexosaminidase B acts_upstream_of_or_within IMP (PMID:10021458), (PMID:15748167) MGI PMID:10021458 PMID:15748167 NCBI chr13:97,312,839...97,334,865
Ensembl chr13:97,312,839...97,334,865 		JBrowse link
G Man2b1 mannosidase 2, alpha B1 involved_in IDA (PMID:9305783) MGI PMID:9305783 NCBI chr 8:85,809,941...85,824,215
Ensembl chr 8:85,809,899...85,824,911 		JBrowse link
G Man2b2 mannosidase 2, alpha B2 involved_in IDA
ISO		 (PMID:29773673)
(PMID:16115860)		 MGI PMID:16115860 PMID:29773673 NCBI chr 5:36,963,913...36,987,973
Ensembl chr 5:36,964,265...36,987,997 		JBrowse link
G Man2c1 mannosidase, alpha, class 2C, member 1 involved_in IBA
IDA		 (PMID:16904268) GO_Central
MGI		 PMID:16904268 GO_REF:0000033 NCBI chr 9:57,037,953...57,049,497
Ensembl chr 9:57,037,974...57,050,006 		JBrowse link
G Manba mannosidase, beta A, lysosomal involved_in IDA (PMID:3447593) MGI PMID:3447593 NCBI chr 3:135,191,367...135,277,165
Ensembl chr 3:135,191,372...135,277,165 		JBrowse link
G Neu1 neuraminidase 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:35,150,229...35,156,273
Ensembl chr17:35,150,229...35,154,929 		JBrowse link
G Neu2 neuraminidase 2 involved_in IDA
IBA
ISO		 (MGI:1354405|PMID:10713120) UniProt
GO_Central
MGI		 PMID:10713120 GO_REF:0000033 GO_REF:0000119 MGI:1354405 MGI:4834177 NCBI chr 1:87,501,749...87,525,567
Ensembl chr 1:87,437,611...87,525,567 		JBrowse link
G Neu3 neuraminidase 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:99,460,646...99,477,579
Ensembl chr 7:99,460,646...99,477,624 		JBrowse link
G Neu4 sialidase 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:93,948,215...93,956,056
Ensembl chr 1:93,948,173...93,956,056 		JBrowse link
sucrose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbp1 fructose bisphosphatase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:63,012,567...63,036,112
Ensembl chr13:63,012,567...63,036,096 		JBrowse link
G Fbp2 fructose bisphosphatase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:62,984,698...63,006,214
Ensembl chr13:62,984,691...63,006,236 		JBrowse link
sucrose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sis sucrase isomaltase involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:72,795,890...72,875,196
Ensembl chr 3:72,795,890...72,875,196 		JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase (brush-border membrane glycoprotein) involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:44,584,530...44,597,602
Ensembl chr 9:44,584,530...44,597,602 		JBrowse link
trehalose metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase (brush-border membrane glycoprotein) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 9:44,584,530...44,597,602
Ensembl chr 9:44,584,530...44,597,602 		JBrowse link
trehalose metabolism in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf Braf transforming gene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:39,580,171...39,702,592
Ensembl chr 6:39,580,171...39,702,397 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    metabolic process 11001
      organic substance metabolic process 10573
        carbohydrate metabolic process 592
          oligosaccharide metabolic process 50
            6-alpha-maltosylglucose metabolic process + 0
            ajugose metabolic process + 0
            cellodextrin metabolic process + 0
            cellooligosaccharide metabolic process + 0
            cellotriose metabolic process + 0
            cyclodextrin metabolic process + 1
            disaccharide metabolic process + 9
            lipopolysaccharide core region metabolic process + 0
            maltoheptaose metabolic process + 0
            oligosaccharide biosynthetic process + 20
            oligosaccharide catabolic process + 15
            raffinose metabolic process + 0
            stachyose metabolic process + 0
            verbascose metabolic process + 0
paths to the root