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ONTOLOGY REPORT - ANNOTATIONS


Term:oligosaccharide metabolic process
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Accession:GO:0009311 term browser browse the term
Definition:The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms:exact_synonym: oligosaccharide metabolism
 narrow_synonym: multicellular organismal oligosaccharide metabolic process
 alt_id: GO:0051690



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oligosaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMY1A amylase alpha 1A involved_in IDA (PMID:12527308) UniProt PMID:12527308 NCBI chr 1:103,655,519...103,664,554
Ensembl chr 1:103,655,760...103,664,554
JBrowse link
G AMY1B amylase alpha 1B involved_in IDA (PMID:12527308) UniProt PMID:12527308 NCBI chr 1:103,687,415...103,696,453
Ensembl chr 1:103,687,415...103,696,454
JBrowse link
G AMY1C amylase alpha 1C involved_in IDA (PMID:12527308) UniProt PMID:12527308 NCBI chr 1:103,749,654...103,758,692
Ensembl chr 1:103,745,323...103,758,726
JBrowse link
G FUT3 fucosyltransferase 3 (Lewis blood group) involved_in IDA (PMID:1740457) UniProt PMID:1740457 NCBI chr19:5,842,888...5,857,122
Ensembl chr19:5,842,888...5,851,471
JBrowse link
G FUT4 fucosyltransferase 4 involved_in IDA (PMID:1740457) UniProt PMID:1740457 NCBI chr11:94,543,921...94,549,895
Ensembl chr11:94,543,921...94,549,895
JBrowse link
G FUT5 fucosyltransferase 5 involved_in IDA (PMID:1740457), (PMID:9737988) UniProt PMID:1740457 PMID:9737988 NCBI chr19:5,865,826...5,870,540
Ensembl chr19:5,865,826...5,870,540
JBrowse link
G GAL3ST3 galactose-3-O-sulfotransferase 3 involved_in NAS (PMID:11323440), (PMID:11356829) UniProt PMID:11323440 PMID:11356829 NCBI chr11:66,040,765...66,049,161
Ensembl chr11:66,040,765...66,049,161
JBrowse link
G GAL3ST4 galactose-3-O-sulfotransferase 4 involved_in NAS (PMID:11333265) UniProt PMID:11333265 NCBI chr 7:100,159,244...100,168,617
Ensembl chr 7:100,159,244...100,168,617
JBrowse link
G GLA galactosidase alpha involved_in IDA
IBA
IEA
(PMID:39940) UniProt
GO_Central
TreeGrafter
PMID:39940 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:101,397,803...101,407,925
Ensembl chr  X:101,393,273...101,408,012
JBrowse link
G LOC124905666 alpha-amylase 1B involved_in IDA (PMID:12527308) UniProt PMID:12527308
G LOC124905668 alpha-amylase 1B involved_in IDA (PMID:12527308) UniProt PMID:12527308
G LOC128966568 alpha-amylase 1B involved_in IDA (PMID:12527308) UniProt PMID:12527308
G LOC128966570 alpha-amylase 1B involved_in IDA (PMID:12527308) UniProt PMID:12527308
G MAN1B1 mannosidase alpha class 1B member 1 involved_in TAS (PMID:10409699) PINC PMID:10409699 NCBI chr 9:137,086,985...137,109,183
Ensembl chr 9:137,086,857...137,109,189
JBrowse link
G MOGS mannosyl-oligosaccharide glucosidase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 2:74,461,057...74,465,382
Ensembl chr 2:74,461,057...74,465,410
JBrowse link
G NAGA alpha-N-acetylgalactosaminidase involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr22:42,058,334...42,070,842
Ensembl chr22:42,058,334...42,070,842
JBrowse link
G ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 involved_in IDA (PMID:12235148) UniProt PMID:12235148 NCBI chr 2:106,801,600...106,887,277
Ensembl chr 2:106,801,600...106,887,108
JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:76,074,746...76,637,339
Ensembl chr 1:76,074,746...76,634,603
JBrowse link
G ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:127,907,886...127,917,041
Ensembl chr 9:127,907,886...127,917,041
JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:76,867,480...77,067,546
Ensembl chr 1:76,867,480...77,067,546
JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:127,885,321...127,906,616
Ensembl chr 9:127,885,321...127,905,408
JBrowse link
G ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr12:22,193,391...22,334,707
Ensembl chr12:22,063,773...22,437,041
JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IDA
IBA
IEA
(PMID:10766765) BHF-UCL
GO_Central
TreeGrafter
PMID:10766765 GO_REF:0000033 GO_REF:0000118 NCBI chr15:92,393,881...92,468,728
Ensembl chr15:92,393,881...92,468,728
JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IDA
IEA
IBA
(PMID:10766765) BHF-UCL
TreeGrafter
GO_Central
PMID:10766765 GO_REF:0000033 GO_REF:0000118 NCBI chr18:57,352,557...57,368,931
Ensembl chr18:57,352,557...57,371,731
JBrowse link
G ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IDA
IEA
IBA
(PMID:10766765) BHF-UCL
TreeGrafter
GO_Central
PMID:10766765 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:100,806,933...100,903,282
Ensembl chr 5:100,806,933...100,903,282
JBrowse link
G ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr18:46,667,821...46,757,053
Ensembl chr18:46,667,821...46,759,257
JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA
IBA
ISS
(PMID:11980897) Ensembl
TreeGrafter
GO_Central
BHF-UCL
PMID:11980897 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:17,315,421...17,454,595
Ensembl chr10:17,315,421...17,454,595
JBrowse link
cellobiose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCT lactase involved_in IDA (PMID:3929764) UniProt PMID:3929764 NCBI chr 2:135,787,850...135,837,184
Ensembl chr 2:135,787,850...135,837,184
JBrowse link
cyclodextrin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPC1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5049785|PMID:21697390) MGI
Ensembl
PMID:21697390 GO_REF:0000107 MGI:5049785 NCBI chr18:23,506,184...23,586,506
Ensembl chr18:23,506,184...23,586,506
JBrowse link
disaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase involved_in TAS (PMID:2470345) PINC PMID:2470345 NCBI chr 4:986,997...1,008,351
Ensembl chr 4:986,997...1,004,564
JBrowse link
lactose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
TAS
(MGI:87365|PMID:9155011) MGI
Ensembl
Reactome
PMID:9155011 GO_REF:0000107 MGI:87365 Reactome:R-HSA-5653890 NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,104,082...33,167,356
JBrowse link
G LALBA lactalbumin alpha involved_in IEA
TAS
(PMID:7708733) InterPro
Ensembl
PINC
UniProt
PMID:7708733 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr12:48,567,684...48,571,845
Ensembl chr12:48,567,684...48,570,066
JBrowse link
lactose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCT lactase involved_in IDA (PMID:12594539), (PMID:3929764), (PMID:9762914) UniProt PMID:3929764 PMID:9762914 PMID:12594539 NCBI chr 2:135,787,850...135,837,184
Ensembl chr 2:135,787,850...135,837,184
JBrowse link
maltose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAM maltase-glucoamylase involved_in IDA (PMID:18036614), (PMID:22058037), (PMID:27480812) UniProt PMID:18036614 PMID:22058037 PMID:27480812 NCBI chr 7:141,986,518...142,106,747
Ensembl chr 7:141,907,813...142,106,747
JBrowse link
G SLC3A1 solute carrier family 3 member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:44,275,480...44,322,437
Ensembl chr 2:44,275,458...44,321,494
JBrowse link
maltose metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAA alpha glucosidase involved_in IC (PMID:9505277) BHF-UCL PMID:9505277 NCBI chr17:80,101,581...80,119,881
Ensembl chr17:80,101,533...80,119,881
JBrowse link
G GANC glucosidase alpha, neutral C involved_in IEA GOC GO_REF:0000108 NCBI chr15:42,273,201...42,353,666
Ensembl chr15:42,273,201...42,353,666
JBrowse link
oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABO ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase involved_in ISO (MGI:1933875|PMID:11278752) MGI PMID:11278752 MGI:1933875 NCBI chr 9:133,250,401...133,275,201
Ensembl chr 9:133,233,278...133,276,024
JBrowse link
G B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1101659|PMID:9417047) MGI
Ensembl
PMID:9417047 GO_REF:0000107 MGI:1101659 NCBI chr 3:161,083,883...161,105,349
Ensembl chr 3:161,083,883...161,105,411
JBrowse link
G B3GALT1 beta-1,3-galactosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IDA
IEA
TAS
(MGI:1101659|PMID:9417047)
(PMID:9582303)
MGI
UniProt
Ensembl
Reactome
PMID:9417047 PMID:9582303 GO_REF:0000107 MGI:1101659 Reactome:R-HSA-9037629 NCBI chr 2:167,293,001...167,874,045
Ensembl chr 2:167,293,001...167,874,045
JBrowse link
G B3GALT2 beta-1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
TAS
IEA
(MGI:1101659|PMID:9417047) MGI
Reactome
Ensembl
PMID:9417047 GO_REF:0000107 MGI:1101659 Reactome:R-HSA-9037629 NCBI chr 1:193,178,730...193,186,613
Ensembl chr 1:193,178,730...193,186,613
JBrowse link
G B3GALT4 beta-1,3-galactosyltransferase 4 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr 6:33,277,123...33,278,825
Ensembl chr 6:33,277,123...33,284,832
JBrowse link
G B3GALT5 beta-1,3-galactosyltransferase 5 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr21:39,612,940...39,673,137
Ensembl chr21:39,556,442...39,673,137
JBrowse link
G B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr17:49,120,344...49,176,840
Ensembl chr17:49,132,460...49,176,840
JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IDA
IEA
NAS
(MGI:1290117|PMID:9813328)
(PMID:2120039)
(PMID:7540104)
MGI
UniProt
Ensembl
PMID:2120039 PMID:7540104 PMID:9813328 GO_REF:0000107 MGI:1290117 NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,104,082...33,167,356
JBrowse link
G FUT1 fucosyltransferase 1 (H blood group) involved_in TAS
IEA
Reactome
Ensembl
GO_REF:0000107 Reactome:R-HSA-9033807 NCBI chr19:48,748,011...48,755,358
Ensembl chr19:48,748,011...48,755,390
JBrowse link
G FUT10 fucosyltransferase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:33,308,061...33,473,146
Ensembl chr 8:33,370,824...33,473,146
JBrowse link
G FUT2 fucosyltransferase 2 (H blood group) involved_in TAS
IEA
Reactome
Ensembl
GO_REF:0000107 Reactome:R-HSA-9033807 Reactome:R-HSA-9037629 NCBI chr19:48,695,971...48,705,951
Ensembl chr19:48,695,971...48,705,951
JBrowse link
G FUT3 fucosyltransferase 3 (Lewis blood group) involved_in TAS
IDA
(PMID:1977660) Reactome
BHF-UCL
PMID:1977660 Reactome:R-HSA-9037629 NCBI chr19:5,842,888...5,857,122
Ensembl chr19:5,842,888...5,851,471
JBrowse link
G FUT4 fucosyltransferase 4 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr11:94,543,921...94,549,895
Ensembl chr11:94,543,921...94,549,895
JBrowse link
G FUT5 fucosyltransferase 5 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr19:5,865,826...5,870,540
Ensembl chr19:5,865,826...5,870,540
JBrowse link
G FUT6 fucosyltransferase 6 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr19:5,830,408...5,839,702
Ensembl chr19:5,830,408...5,839,722
JBrowse link
G FUT7 fucosyltransferase 7 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr 9:137,030,174...137,032,088
Ensembl chr 9:137,030,174...137,032,088
JBrowse link
G FUT8 fucosyltransferase 8 involved_in TAS (PMID:9133635) PINC PMID:9133635 NCBI chr14:65,356,842...65,744,121
Ensembl chr14:65,410,592...65,744,121
JBrowse link
G FUT9 fucosyltransferase 9 involved_in TAS
IEA
Reactome
Ensembl
GO_REF:0000107 Reactome:R-HSA-9037629 NCBI chr 6:96,015,974...96,215,612
Ensembl chr 6:96,015,974...96,215,612
JBrowse link
G MGAT2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:49,620,799...49,623,481
Ensembl chr14:49,620,799...49,623,481
JBrowse link
G MPDU1 mannose-P-dolichol utilization defect 1 involved_in IDA
IBA
IEA
IGI
(PMID:11179430)
(PMID:11733564)
UniProt
GO_Central
TreeGrafter
PMID:11179430 PMID:11733564 GO_REF:0000033 GO_REF:0000118 NCBI chr17:7,583,647...7,588,212
Ensembl chr17:7,583,529...7,592,789
JBrowse link
G SEC1P secretory blood group 1, pseudogene involved_in ISO (MGI:2136486|PMID:11323419) MGI PMID:11323419 MGI:2136486 NCBI chr19:48,638,039...48,682,245
Ensembl chr19:48,638,071...48,682,245
Ensembl chr19:48,638,071...48,682,245
JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA (PMID:9266697) BHF-UCL PMID:9266697 NCBI chr16:70,375,977...70,439,100
Ensembl chr16:70,375,977...70,439,237
JBrowse link
G ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr 1:43,707,536...43,931,159
Ensembl chr 1:43,705,824...43,931,165
JBrowse link
G ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in TAS
IDA
(PMID:8288606) Reactome
BHF-UCL
PMID:8288606 Reactome:R-HSA-9037629 NCBI chr11:126,355,686...126,414,638
Ensembl chr11:126,355,640...126,440,344
JBrowse link
G ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 involved_in TAS Reactome Reactome:R-HSA-9037629 NCBI chr 3:98,732,262...98,795,852
Ensembl chr 3:98,732,236...98,821,201
JBrowse link
G ST6GALNAC1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:2153262|PMID:10788794) MGI
GO_Central
TreeGrafter
Ensembl
PMID:10788794 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:2153262 NCBI chr17:76,617,407...76,643,757
Ensembl chr17:76,624,761...76,643,786
JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISS (PMID:12668675) BHF-UCL PMID:12668675 NCBI chr 1:76,867,480...77,067,546
Ensembl chr 1:76,867,480...77,067,546
JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISS
IEA
TAS
(PMID:12668675) BHF-UCL
Ensembl
Reactome
PMID:12668675 GO_REF:0000107 Reactome:R-HSA-9037629 NCBI chr 9:127,885,321...127,906,616
Ensembl chr 9:127,885,321...127,905,408
JBrowse link
oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTBS chitobiase involved_in ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
PMID:2751306 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2301430 NCBI chr 1:84,549,611...84,574,440
Ensembl chr 1:84,549,611...84,574,480
JBrowse link
G GBA3 glucosylceramidase beta 3 (gene/pseudogene) involved_in IDA (PMID:26193330) CAFA PMID:26193330 NCBI chr 4:22,692,937...22,819,569
Ensembl chr 4:22,692,914...22,819,575
JBrowse link
G GM2A ganglioside GM2 activator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1203907|PMID:9584189) MGI
Ensembl
PMID:9584189 GO_REF:0000107 MGI:1203907 NCBI chr 5:151,253,185...151,270,440
Ensembl chr 5:151,212,150...151,270,440
JBrowse link
G HEXB hexosaminidase subunit beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331265|PMID:10021458), (MGI:3573807|PMID:15748167) MGI
Ensembl
PMID:10021458 PMID:15748167 GO_REF:0000107 MGI:1331265 MGI:3573807 NCBI chr 5:74,640,023...74,721,288
Ensembl chr 5:74,640,023...74,722,647
JBrowse link
G MAN2B1 mannosidase alpha class 2B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,646,512...12,666,742
Ensembl chr19:12,646,511...12,666,742
JBrowse link
G MAN2B2 mannosidase alpha class 2B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:6,575,189...6,623,362
Ensembl chr 4:6,575,189...6,623,362
JBrowse link
G MAN2C1 mannosidase alpha class 2C member 1 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:75,355,792...75,368,607
Ensembl chr15:75,355,207...75,368,612
JBrowse link
G MANBA mannosidase beta involved_in TAS Reactome Reactome:R-HSA-8853383 NCBI chr 4:102,630,770...102,760,968
Ensembl chr 4:102,630,770...102,760,994
JBrowse link
G NEU1 neuraminidase 1 involved_in IMP
IEA
IBA
(PMID:8985184) UniProt
TreeGrafter
GO_Central
PMID:8985184 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:31,857,659...31,862,821
Ensembl chr 6:31,857,659...31,862,905
JBrowse link
G NEU2 neuraminidase 2 involved_in IDA
IEA
IBA
(PMID:14613940), (PMID:22228546), (PMID:26193330) UniProt
TreeGrafter
GO_Central
PMID:14613940 PMID:22228546 PMID:26193330 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:233,032,672...233,035,057
Ensembl chr 2:233,032,672...233,035,057
JBrowse link
G NEU3 neuraminidase 3 involved_in IDA
IEA
IBA
(PMID:10861246) UniProt
TreeGrafter
GO_Central
PMID:10861246 GO_REF:0000033 GO_REF:0000118 NCBI chr11:74,980,515...75,020,676
Ensembl chr11:74,988,279...75,018,893
JBrowse link
G NEU4 neuraminidase 4 involved_in IDA
IEA
IBA
(PMID:15213228) UniProt
TreeGrafter
GO_Central
PMID:15213228 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:241,809,193...241,817,413
Ensembl chr 2:241,809,065...241,817,413
JBrowse link
sucrose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBP1 fructose-bisphosphatase 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:94,603,133...94,640,263
Ensembl chr 9:94,603,133...94,640,249
JBrowse link
G FBP2 fructose-bisphosphatase 2 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:94,558,720...94,593,824
Ensembl chr 9:94,558,720...94,593,824
JBrowse link
sucrose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SI sucrase-isomaltase involved_in IDA (PMID:27480812) UniProt PMID:27480812 NCBI chr 3:164,978,898...165,157,921
Ensembl chr 3:164,978,898...165,078,496
JBrowse link
G SLC3A1 solute carrier family 3 member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:44,275,480...44,322,437
Ensembl chr 2:44,275,458...44,321,494
JBrowse link
sucrose metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAA alpha glucosidase involved_in IC (PMID:9505277) BHF-UCL PMID:9505277 NCBI chr17:80,101,581...80,119,881
Ensembl chr17:80,101,533...80,119,881
JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGGHG protein-glucosylgalactosylhydroxylysine glucosidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:289,126...296,107
Ensembl chr11:289,126...296,107
JBrowse link
G TREH trehalase involved_in IDA
IBA
IEA
(PMID:9427547) UniProt
GO_Central
TreeGrafter
PMID:9427547 GO_REF:0000033 GO_REF:0000118 NCBI chr11:118,657,316...118,679,650
Ensembl chr11:118,657,316...118,679,690
JBrowse link
trehalose metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREH trehalase involved_in NAS
IEA
(PMID:8773341) UniProt
InterPro
PMID:8773341 GO_REF:0000002 NCBI chr11:118,657,316...118,679,650
Ensembl chr11:118,657,316...118,679,690
JBrowse link
trehalose metabolism in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase involved_in IMP (PMID:9837904) SGD PMID:9837904 NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19758
    metabolic process 12488
      organic substance metabolic process 11977
        carbohydrate metabolic process 650
          oligosaccharide metabolic process 76
            6-alpha-maltosylglucose metabolic process + 0
            ajugose metabolic process + 0
            cellodextrin metabolic process + 0
            cellooligosaccharide metabolic process + 0
            cellotriose metabolic process + 0
            cyclodextrin metabolic process + 1
            disaccharide metabolic process + 14
            lipopolysaccharide core region metabolic process + 0
            maltoheptaose metabolic process + 0
            oligosaccharide biosynthetic process + 31
            oligosaccharide catabolic process + 18
            raffinose metabolic process + 0
            stachyose metabolic process + 0
            verbascose metabolic process + 0
paths to the root