ONTOLOGY REPORT - ANNOTATIONS
Term: oligosaccharide metabolic process
Accession: GO:0009311
browse the term
Definition: The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
Synonyms: exact_synonym: oligosaccharide metabolism
narrow_synonym: multicellular organismal oligosaccharide metabolic process
alt_id: GO:0051690
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Fut4
fucosyltransferase 4
involved_in
ISO ISS IEA
(PMID:1740457) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:1740457
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:19,868,178...19,872,139
Ensembl chr 8:19,868,079...19,872,436
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Gla
galactosidase, alpha
involved_in
ISO IBA
(PMID:39940) GO_REF:0000033
RGD GO_Central
PMID:39940
GO_REF:0000033
NCBI chr X:102,062,497...102,073,915
Ensembl chr X:102,056,718...102,073,915
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Mogs
mannosyl-oligosaccharide glucosidase
involved_in
IEA
GO_REF:0000002 GO_REF:0000104
InterPro UniProt
GO_REF:0000002 GO_REF:0000104
NCBI chr 4:117,179,335...117,182,738
Ensembl chr 4:117,179,335...117,182,744
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Naga
alpha-N-acetylgalactosaminidase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:115,726,438...115,735,494
Ensembl chr 7:115,726,624...115,736,828
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St6gal2
ST6 beta-galactoside alpha-2,6-sialyltransferase 2
involved_in
ISO ISS
(PMID:12235148) GO_REF:0000024
RGD UniProt
PMID:12235148
GO_REF:0000024
NCBI chr 9:9,508,928...9,606,900
Ensembl chr 9:9,509,548...9,594,007
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St6galnac3
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:244,789,627...245,304,975
Ensembl chr 2:244,789,627...245,304,977
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St6galnac4
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:36,269,834...36,282,971
Ensembl chr 3:36,269,878...36,282,971
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St6galnac5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:244,402,589...244,571,097
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St6galnac6
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:36,283,573...36,305,217
Ensembl chr 3:36,283,629...36,305,216
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St8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:177,513,966...177,651,553
Ensembl chr 4:177,520,926...177,651,553
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St8sia2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
involved_in
ISO IEA IBA
(PMID:10766765) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:10766765
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:137,172,354...137,247,796
Ensembl chr 1:137,172,354...137,247,792
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St8sia3
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
involved_in
ISO IEA IBA
(PMID:10766765) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:10766765
GO_REF:0000033 GO_REF:0000107
NCBI chr18:60,024,555...60,031,050
Ensembl chr18:60,024,236...60,032,473
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St8sia4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
involved_in
ISO IEA IBA
(PMID:10766765) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:10766765
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:103,437,479...103,532,008
Ensembl chr 9:103,437,479...103,532,008
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St8sia5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:73,010,235...73,072,984
Ensembl chr18:73,011,383...73,072,991
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St8sia6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
involved_in
ISO IEA
(PMID:11980897) GO_REF:0000107
RGD Ensembl
PMID:11980897
GO_REF:0000107
NCBI chr17:81,649,866...81,847,970
Ensembl chr17:81,653,687...81,792,732
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Lct
lactase
involved_in
IDA ISO IEA IBA
PMID:4752949 (PMID:3929764) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:3929764 PMID:4752949
GO_REF:0000033 GO_REF:0000107, RGD:151356630
NCBI chr13:42,334,347...42,376,872
Ensembl chr13:42,334,347...42,376,872
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Npc1
NPC intracellular cholesterol transporter 1
acts_upstream_of_or_within
ISO IEA
MGI:1857409 (PMID:21697390) GO_REF:0000107
RGD Ensembl
PMID:21697390
GO_REF:0000107
NCBI chr18:3,654,237...3,699,853
Ensembl chr18:3,654,237...3,699,800
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B4galt1
beta-1,4-galactosyltransferase 1
involved_in acts_upstream_of_or_within
ISO IEA
MGI:2450889 (PMID:9155011) GO_REF:0000107
RGD Ensembl
PMID:9155011
GO_REF:0000107
NCBI chr 5:60,731,601...60,778,456
Ensembl chr 5:60,731,602...60,778,445
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Lalba
lactalbumin, alpha
involved_in
IEA ISO
GO_REF:0000043 GO_REF:0000117 GO_REF:0000002 MGI:3513842 (PMID:8022817)
UniProt InterPro RGD
PMID:8022817
GO_REF:0000002 GO_REF:0000043 GO_REF:0000117
NCBI chr 7:131,504,572...131,520,707
Ensembl chr 7:131,504,572...131,507,072
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Lct
lactase
involved_in
IDA IBA IEA ISO
PMID:4752949 GO_REF:0000033 GO_REF:0000107 (PMID:12594539), (PMID:3929764), (PMID:9762914)
GO_Central Ensembl RGD
PMID:3929764 PMID:9762914 PMID:12594539 PMID:4752949
GO_REF:0000033 GO_REF:0000107, RGD:151356630
NCBI chr13:42,334,347...42,376,872
Ensembl chr13:42,334,347...42,376,872
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Mgam
maltase-glucoamylase
involved_in
ISO
(PMID:18036614), (PMID:22058037), (PMID:27480812)
RGD
PMID:18036614 PMID:22058037 PMID:27480812
NCBI chr 4:70,408,263...70,568,752
Ensembl chr 4:70,408,263...70,568,752
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Abo
ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase
involved_in
ISO
(PMID:11278752)
RGD
PMID:11278752
NCBI chr 3:30,560,172...30,604,758
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B3galnt1
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
acts_upstream_of_or_within
ISO IEA
(PMID:9417047) GO_REF:0000107
RGD Ensembl
PMID:9417047
GO_REF:0000107
NCBI chr 2:156,157,234...156,187,037
Ensembl chr 2:156,156,265...156,188,404
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B3galt1
Beta-1,3-galactosyltransferase 1
involved_in acts_upstream_of_or_within
ISO
(PMID:9582303) (PMID:9417047)
RGD
PMID:9417047 PMID:9582303
NCBI chr 3:72,661,410...73,234,447
Ensembl chr 3:72,660,801...73,235,276
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B3galt2
Beta-1,3-galactosyltransferase 2
acts_upstream_of_or_within
ISO IEA
(PMID:9417047) GO_REF:0000107
RGD Ensembl
PMID:9417047
GO_REF:0000107
NCBI chr13:57,939,724...57,948,735
Ensembl chr13:57,930,539...57,956,539
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B4galt1
beta-1,4-galactosyltransferase 1
acts_upstream_of_or_within involved_in
TAS IEA ISO
GO_REF:0000107 (PMID:9813328) (PMID:2120039)
Ensembl RGD
PMID:2120039 PMID:9813328 PMID:12098497
GO_REF:0000107, RGD:1302270
NCBI chr 5:60,731,601...60,778,456
Ensembl chr 5:60,731,602...60,778,445
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Dcps
decapping enzyme, scavenger
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:41,729,507...41,782,222
Ensembl chr 8:41,724,563...41,782,222
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Fgf21
fibroblast growth factor 21
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:105,219,825...105,221,376
Ensembl chr 1:105,219,825...105,232,056
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Fut1
fucosyltransferase 1
involved_in
ISO
MGI:2183219 (PMID:11713270)
RGD
PMID:11713270
NCBI chr 1:105,223,399...105,226,817
Ensembl chr 1:105,223,390...105,227,513
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Fut10
fucosyltransferase 10
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr16:67,571,828...67,661,814
Ensembl chr16:67,581,565...67,661,753
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Fut2
fucosyltransferase 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:11323419)
Ensembl RGD
PMID:11323419
GO_REF:0000107
NCBI chr 1:105,256,013...105,276,828
Ensembl chr 1:105,255,390...105,276,647
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Fut9
fucosyltransferase 9
involved_in
ISO
MGI:3044951 (PMID:23986452)
RGD
PMID:23986452
NCBI chr 5:44,148,371...44,361,209
Ensembl chr 5:44,146,152...44,362,823
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Mgat2
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:93,392,416...93,394,905
Ensembl chr 6:93,390,555...93,395,176
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Mpdu1
mannose-P-dolichol utilization defect 1
involved_in
ISO IEA IBA
UniProtKB:O75352 (PMID:11179430), (PMID:11733564) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:11179430 PMID:11733564
GO_REF:0000033 GO_REF:0000107
NCBI chr10:54,873,467...54,880,536
Ensembl chr10:54,873,473...54,879,195
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St3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2
involved_in
ISO IEA
(PMID:9266697) GO_REF:0000107
RGD Ensembl
PMID:9266697
GO_REF:0000107
NCBI chr19:55,798,112...55,849,226
Ensembl chr19:55,799,471...55,849,225
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St3gal4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4
involved_in
ISO IEA
(PMID:8288606) GO_REF:0000107
RGD Ensembl
PMID:8288606
GO_REF:0000107
NCBI chr 8:41,673,510...41,723,158
Ensembl chr 8:41,673,510...41,712,551
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St6galnac1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:10788794)
GO_Central RGD
PMID:10788794
GO_REF:0000033
NCBI chr10:102,471,481...102,481,876
Ensembl chr10:102,471,493...102,481,876
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St6galnac5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
involved_in
ISO
(PMID:12668675)
RGD
PMID:12668675
NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:244,402,589...244,571,097
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St6galnac6
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
involved_in
ISO
(PMID:12668675)
RGD
PMID:12668675
NCBI chr 3:36,283,573...36,305,217
Ensembl chr 3:36,283,629...36,305,216
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Ctbs
chitobiase
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:2751306
GO_REF:0000033, RGD:2301430
NCBI chr 2:238,000,800...238,015,368
Ensembl chr 2:238,000,842...238,015,475
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Gba3
glucosylceramidase beta 3
involved_in
ISO
(PMID:26193330)
RGD
PMID:26193330
NCBI chr14:64,787,601...64,934,043
Ensembl chr14:64,787,601...64,934,043
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Gm2a
ganglioside GM2 activator
acts_upstream_of_or_within
ISO
MGI:1861930 (PMID:9584189)
RGD
PMID:9584189
NCBI chr10:39,719,919...39,732,452
Ensembl chr10:39,719,938...39,732,451
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Hexb
hexosaminidase subunit beta
acts_upstream_of_or_within
ISO IEA
MGI:1857438 (PMID:10021458), (PMID:15748167) GO_REF:0000107
RGD Ensembl
PMID:10021458 PMID:15748167
GO_REF:0000107
NCBI chr 2:30,218,608...30,238,771
Ensembl chr 2:30,218,608...30,238,771
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Man2b1
mannosidase, alpha, class 2B, member 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr19:39,959,964...39,979,299
Ensembl chr19:39,959,965...39,979,246
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Man2c1
mannosidase, alpha, class 2C, member 1
involved_in
IEA IBA
GO_REF:0000107 GO_REF:0000033
Ensembl GO_Central
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:66,434,480...66,445,649
Ensembl chr 8:66,434,421...66,445,648
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Neu1
neuraminidase 1
involved_in
IEA ISO ISS IBA
GO_REF:0000107 (PMID:8985184) GO_REF:0000024 GO_REF:0000033
Ensembl RGD UniProt GO_Central
PMID:8985184
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr20:3,902,120...3,906,383
Ensembl chr20:3,902,120...3,906,383
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Neu2
neuraminidase 2
involved_in
ISS ISO IEA IBA
GO_REF:0000024 (PMID:14613940), (PMID:22228546), (PMID:26193330) GO_REF:0000107 GO_REF:0000033 (PMID:10713120)
UniProt RGD Ensembl GO_Central
PMID:10713120 PMID:14613940 PMID:22228546 PMID:26193330
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 9:95,666,338...95,715,209
Ensembl chr 9:95,696,507...95,715,208
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Neu3
neuraminidase 3
involved_in
ISO IBA
(PMID:10861246) GO_REF:0000033
RGD GO_Central
PMID:10861246
GO_REF:0000033
NCBI chr 1:163,549,834...163,560,997
Ensembl chr 1:163,549,738...163,561,049
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Neu4
neuraminidase 4
involved_in
ISO IBA
(PMID:15213228) GO_REF:0000033
RGD GO_Central
PMID:15213228
GO_REF:0000033
NCBI chr 9:101,844,261...101,849,917
Ensembl chr 9:101,844,261...101,849,917
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Si
sucrase-isomaltase
involved_in
ISO
(PMID:27480812)
RGD
PMID:27480812
NCBI chr 2:159,804,568...159,884,902
Ensembl chr 2:159,804,568...159,883,934
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Treh
trehalase
involved_in
ISO IEA IBA
(PMID:9427547) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:9427547
GO_REF:0000033 GO_REF:0000107
NCBI chr 8:53,886,946...53,901,113
Ensembl chr 8:53,886,946...53,900,335
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Treh
trehalase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 8:53,886,946...53,901,113
Ensembl chr 8:53,886,946...53,900,335
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