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ONTOLOGY REPORT - ANNOTATIONS


Term:amine biosynthetic process
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Accession:GO:0009309 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
Synonyms:exact_synonym: amine anabolism;   amine biosynthesis;   amine formation;   amine synthesis


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histamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase ISO (PMID:22767596)
(MGI:MGI:2138019|PMID:11478947)
UniProtKB
MGI
PMID:11478947, PMID:22767596 MGI:MGI:2138019 NCBI chrNW_004936471:12,303,802...12,324,613 JBrowse link
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 ISO (PMID:10318872) UniProtKB PMID:10318872 NCBI chrNW_004936581:5,109,165...5,113,617 JBrowse link
polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO (PMID:15283699) UniProt PMID:15283699 NCBI chrNW_004936624:756,761...759,979 JBrowse link
G Sat2 spermidine/spermine N1-acetyltransferase family member 2 NOT ISO (PMID:15283699) UniProt PMID:15283699 NCBI chrNW_004936595:891,380...892,937 JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase ISO (PMID:16354669) UniProtKB PMID:16354669 NCBI chrNW_004936486:19,503,631...19,511,918 JBrowse link
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 ISO RGD PMID:1415709, PMID:10430362 RGD:1578320, RGD:7242912 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
G Paox polyamine oxidase ISO (PMID:16354669) UniProtKB PMID:16354669 NCBI chrNW_004936486:19,503,631...19,511,918 JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Odc1 ornithine decarboxylase 1 ISO (MGI:MGI:5574513|PMID:24967154) UniProtKB PMID:24967154 MGI:MGI:5574513 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO (MGI:MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709, PMID:10430362, PMID:10712236, PMID:11856372 MGI:MGI:3584197, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chrNW_004936564:6,656,789...6,675,564 JBrowse link
G Srm spermidine synthase ISO (PMID:17585781) RGD
UniProtKB
PMID:8494549, PMID:12843627, PMID:16931179, PMID:17585781 RGD:1359042, RGD:7242920, RGD:7242928 NCBI chrNW_004936474:121,135...124,894 JBrowse link
spermine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO (MGI:MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709, PMID:10430362, PMID:10712236, PMID:11856372 MGI:MGI:3584197, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chrNW_004936564:6,656,789...6,675,564 JBrowse link
G Sms spermine synthase ISO RGD PMID:8494549 RGD:7242928 NCBI chrNW_004936624:2,345,573...2,402,157 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12001
    metabolic process 7670
      nitrogen compound metabolic process 6489
        organonitrogen compound metabolic process 4524
          amine metabolic process 74
            amine biosynthetic process 9
              cellular biogenic amine biosynthetic process + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.