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ONTOLOGY REPORT - ANNOTATIONS


Term:amine biosynthetic process
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Accession:GO:0009309 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
Synonyms:exact_synonym: amine anabolism;   amine biosynthesis;   amine formation;   amine synthesis


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histamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDC histidine decarboxylase ISO (PMID:22767596)
(MGI:MGI:2138019|PMID:11478947)
UniProtKB
MGI
PMID:11478947, PMID:22767596 MGI:MGI:2138019 NCBI chr15:29,188,296...29,212,327
Ensembl chr15:47,510,629...47,534,577
JBrowse link
G PRG3 proteoglycan 3, pro eosinophil major basic protein 2 ISO (PMID:10318872) UniProtKB PMID:10318872 NCBI chr11:52,617,688...52,622,058
Ensembl chr 3:160,108,051...160,112,421
JBrowse link
polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SAT1 spermidine/spermine N1-acetyltransferase 1 ISO (PMID:15283699) UniProt PMID:15283699 NCBI chr  X:16,382,735...16,385,790
Ensembl chr  X:23,756,691...23,760,349
JBrowse link
G SAT2 spermidine/spermine N1-acetyltransferase family member 2 NOT ISO (PMID:15283699) UniProt PMID:15283699 NCBI chr17:7,657,166...7,658,773
Ensembl chr17:7,643,490...7,645,127
JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAOX polyamine oxidase ISO (PMID:16354669) UniProtKB PMID:16354669
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ODC1 ornithine decarboxylase 1 ISO RGD PMID:1415709, PMID:10430362 RGD:1578320, RGD:7242912 NCBI chr2A:10,443,308...10,451,412
Ensembl chr2A:10,598,125...10,607,152
JBrowse link
G PAOX polyamine oxidase ISO (PMID:16354669) UniProtKB PMID:16354669
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ODC1 ornithine decarboxylase 1 ISO (MGI:MGI:5574513|PMID:24967154) UniProtKB PMID:24967154 MGI:MGI:5574513 NCBI chr2A:10,443,308...10,451,412
Ensembl chr2A:10,598,125...10,607,152
JBrowse link
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 ISO (MGI:MGI:3584197|PMID:11856372) MGI
RGD
PMID:1415709, PMID:10430362, PMID:10712236, PMID:11856372 MGI:MGI:3584197, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chr 6:108,678,741...108,699,695
Ensembl chr 6:112,761,072...112,782,074
JBrowse link
G SRM spermidine synthase ISO (PMID:17585781) RGD
UniProtKB
PMID:8494549, PMID:12843627, PMID:16931179, PMID:17585781 RGD:1359042, RGD:7242920, RGD:7242928 NCBI chr 1:9,817,765...9,823,244 JBrowse link
spermine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 ISO (MGI:MGI:3584197|PMID:11856372) RGD
MGI
PMID:1415709, PMID:10430362, PMID:10712236, PMID:11856372 MGI:MGI:3584197, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chr 6:108,678,741...108,699,695
Ensembl chr 6:112,761,072...112,782,074
JBrowse link
G SMS spermine synthase ISO RGD PMID:8494549 RGD:7242928 NCBI chr  X:14,571,432...14,625,601 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12564
    metabolic process 7979
      nitrogen compound metabolic process 6713
        organonitrogen compound metabolic process 4681
          amine metabolic process 74
            amine biosynthetic process 9
              cellular biogenic amine biosynthetic process + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.