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ONTOLOGY REPORT - ANNOTATIONS


Term:amine metabolic process
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Accession:GO:0009308 term browser browse the term
Definition:The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
Synonyms:exact_synonym: amine metabolism


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amine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper-containing 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:48,895,255...48,909,188
Ensembl chr 6:48,872,896...48,909,188
JBrowse link
G Aoc2 amine oxidase, copper containing 2 (retina-specific) IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr11:101,323,640...101,329,807
Ensembl chr11:101,325,063...101,329,702
JBrowse link
G Aoc3 amine oxidase, copper containing 3 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:101,330,606...101,339,430
Ensembl chr11:101,330,605...101,341,938
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IMP (MGI:MGI:3703667|PMID:17052995) MGI PMID:17052995 MGI:MGI:3703667 NCBI chr 9:57,687,928...57,703,824
Ensembl chr 9:57,687,928...57,703,824
JBrowse link
G Doxl1 diamine oxidase-like protein 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:48,929,896...48,933,687
Ensembl chr 6:48,929,895...48,933,687
JBrowse link
G Doxl2 diamine oxidase-like protein 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:48,974,946...48,978,745
Ensembl chr 6:48,974,963...48,978,746
JBrowse link
G Inmt indolethylamine N-methyltransferase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:55,170,627...55,174,990
Ensembl chr 6:55,170,626...55,175,043
JBrowse link
G Svs1 seminal vesicle secretory protein 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:48,986,861...48,991,725
Ensembl chr 6:48,986,861...48,991,722
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:116,110,020...116,129,688
Ensembl chr 3:116,109,949...116,129,688
JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr17:83,831,348...83,848,981
Ensembl chr17:83,831,156...83,847,963
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:24,584,133...24,596,952
Ensembl chr 8:24,584,136...24,597,009
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:24,531,892...24,576,414
Ensembl chr 8:24,531,892...24,576,333
JBrowse link
benzylpenicillin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr19:43,782,308...43,838,332
Ensembl chr19:43,782,192...43,840,740
JBrowse link
cellular biogenic amine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP (MGI:MGI:3607765|PMID:15975715) MGI PMID:15975715 MGI:MGI:3607765 NCBI chr  X:74,026,592...74,085,690
Ensembl chr  X:74,026,592...74,135,363
JBrowse link
choline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmgdh dimethylglycine dehydrogenase precursor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:93,674,436...93,752,823
Ensembl chr13:93,674,433...93,752,833
JBrowse link
cytokinin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psg18 pregnancy specific glycoprotein 18 TAS (MGI:MGI:2178879|PMID:11805154) MGI PMID:11805154 MGI:MGI:2178879 NCBI chr 7:18,345,744...18,355,038
Ensembl chr 7:18,345,422...18,355,009
JBrowse link
ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr19:3,851,585...3,894,369
Ensembl chr19:3,851,773...3,894,369
JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 IMP (MGI:MGI:3793397|PMID:18227059) UniProt PMID:18227059 MGI:MGI:3793397 NCBI chr 7:118,688,558...118,705,738
Ensembl chr 7:118,688,545...118,705,778
JBrowse link
histamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase IMP
IBA
ISO
(MGI:MGI:2138019|PMID:11478947)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:11478947, PMID:21873635 GO_REF:0000096, MGI:MGI:2138019, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 2:126,593,659...126,624,025
Ensembl chr 2:126,593,667...126,619,299
JBrowse link
G Prg3 proteoglycan 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:84,988,196...84,996,559
Ensembl chr 2:84,988,215...84,993,886
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnmt histamine N-methyltransferase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:24,002,911...24,049,758
Ensembl chr 2:24,002,910...24,049,394
JBrowse link
histamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:126,593,659...126,624,025
Ensembl chr 2:126,593,667...126,619,299
JBrowse link
G Hnmt histamine N-methyltransferase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:24,002,911...24,049,758
Ensembl chr 2:24,002,910...24,049,394
JBrowse link
G Trh thyrotropin releasing hormone ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr 6:92,242,061...92,244,650
Ensembl chr 6:92,242,061...92,244,650
JBrowse link
N-acylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd4 abhydrolase domain containing 4 IDA (MGI:MGI:3695251|PMID:16818490) MGI PMID:16818490 MGI:MGI:3695251 NCBI chr14:54,254,129...54,269,169
Ensembl chr14:54,254,188...54,270,637
JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 IDA
IMP
(MGI:MGI:5790171|PMID:25596343)
(MGI:MGI:5295534|PMID:21801852)
MGI
UniProt
PMID:21801852, PMID:25596343 MGI:MGI:5295534, MGI:MGI:5790171 NCBI chr 7:118,688,558...118,705,738
Ensembl chr 7:118,688,545...118,705,778
JBrowse link
G Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 IDA
IBA
IMP
ISO
(MGI:MGI:5790171|PMID:25596343)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:6104349|PMID:27637550)
MGI
GO_Central
UniProt
PMID:21873635, PMID:25596343, PMID:27637550 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5790171, MGI:MGI:6104349, MGI:MGI:6201960 NCBI chr11:87,033,794...87,074,137
Ensembl chr11:87,033,867...87,074,062
JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ISO
IMP
(MGI:MGI:6104349|PMID:27637550) MGI
UniProt
PMID:27637550 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6104349 NCBI chr 7:126,766,414...126,775,645
Ensembl chr 7:126,766,334...126,775,649
JBrowse link
G Naaa N-acylethanolamine acid amidase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:92,257,660...92,278,181
Ensembl chr 5:92,257,659...92,278,170
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D IDA
IBA
IMP
(MGI:MGI:3044670|PMID:14634025)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:3695251|PMID:16818490)
MGI
GO_Central
PMID:14634025, PMID:16818490, PMID:21873635 MGI:MGI:3044670, MGI:MGI:3695251, MGI:MGI:6201960 NCBI chr 5:21,662,901...21,701,622
Ensembl chr 5:21,662,901...21,701,396
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:133,702,674...133,801,059
Ensembl chr 1:133,699,457...133,801,041
JBrowse link
negative regulation of catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, Cu++ transporting, alpha polypeptide IMP (MGI:MGI:54307|PMID:17511) MGI PMID:17511 MGI:MGI:54307 NCBI chr  X:106,027,224...106,128,161
Ensembl chr  X:106,027,276...106,124,926
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:133,702,674...133,801,059
Ensembl chr 1:133,699,457...133,801,041
JBrowse link
negative regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr16:18,406,882...18,426,716
Ensembl chr16:18,406,886...18,426,852
JBrowse link
G Htr2c 5-hydroxytryptamine (serotonin) receptor 2C ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:146,962,464...147,197,277
Ensembl chr  X:146,962,513...147,197,277
JBrowse link
G Itgam integrin alpha M IDA (MGI:MGI:3814938|PMID:18981141) ARUK-UCL PMID:18981141 MGI:MGI:3814938 NCBI chr 7:128,062,640...128,118,491
Ensembl chr 7:128,062,640...128,118,491
JBrowse link
G Snca synuclein, alpha ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 6:60,731,573...60,829,855
Ensembl chr 6:60,731,575...60,829,855
JBrowse link
negative regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atcay ataxia, cerebellar, Cayman type ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:81,204,504...81,230,845
Ensembl chr10:81,204,508...81,230,833
JBrowse link
nor-spermidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyl transferase 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta hydroxylase IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:27,165,507...27,183,204
Ensembl chr 2:27,165,233...27,183,200
JBrowse link
G Moxd1 monooxygenase, DBH-like 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr10:24,223,517...24,302,783
Ensembl chr10:24,223,517...24,302,790
JBrowse link
G Moxd2 monooxygenase, DBH-like 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:40,878,794...40,887,494
Ensembl chr 6:40,878,794...40,887,494
JBrowse link
octopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta hydroxylase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:27,165,507...27,183,204
Ensembl chr 2:27,165,233...27,183,200
JBrowse link
phenylethylamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maoa monoamine oxidase A ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:16,619,698...16,687,812
Ensembl chr  X:16,619,698...16,687,818
JBrowse link
polyamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 S-adenosylmethionine decarboxylase 1 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr10:40,287,458...40,302,188
Ensembl chr10:40,287,458...40,302,188
JBrowse link
G Amd2 S-adenosylmethionine decarboxylase 2 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr10:35,708,691...35,711,891
Ensembl chr10:35,708,675...35,711,892
JBrowse link
G Azin1 antizyme inhibitor 1 IEA UniProtKB GO_REF:0000002, GO_REF:0000004, MGI:MGI:1354194, MGI:MGI:2152098 NCBI chr15:38,487,430...38,519,294
Ensembl chr15:38,487,427...38,519,266
JBrowse link
G Azin2 antizyme inhibitor 2 IEA UniProtKB GO_REF:0000002, GO_REF:0000004, MGI:MGI:1354194, MGI:MGI:2152098 NCBI chr 4:128,930,233...128,962,456
Ensembl chr 4:128,930,233...128,962,442
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr10:80,826,656...80,829,290
Ensembl chr10:80,826,656...80,829,290
JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 9:65,676,548...65,690,300
Ensembl chr 9:65,668,001...65,690,300
JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 3:94,433,387...94,436,651
Ensembl chr 3:94,432,414...94,443,915
JBrowse link
G Odc1 ornithine decarboxylase, structural 1 IEA UniProtKB GO_REF:0000002, GO_REF:0000004, MGI:MGI:1354194, MGI:MGI:2152098 NCBI chr12:17,544,808...17,551,502
Ensembl chr12:17,544,794...17,551,505
JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:155,213,126...155,216,449
Ensembl chr  X:155,213,132...155,216,449
JBrowse link
G Sat2 spermidine/spermine N1-acetyl transferase 2 NOT ISO (PMID:15283699) UniProt PMID:15283699 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
G Sms spermine synthase IEA UniProt GO_REF:0000004, MGI:MGI:1354194 NCBI chr  X:157,443,851...157,492,287
Ensembl chr  X:157,443,855...157,492,287
JBrowse link
G Srm spermidine synthase IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 4:148,591,513...148,594,619
Ensembl chr 4:148,591,503...148,594,993
JBrowse link
polyamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase (exo-N4-amino) ISO
IDA
(MGI:MGI:2652311|PMID:12477380)
(MGI:MGI:2663545|PMID:12660232)
MGI
RGD
PMID:12477380, PMID:12660232 GO_REF:0000096, MGI:MGI:2652311, MGI:MGI:2663545, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 7:140,115,735...140,134,334
Ensembl chr 7:140,115,799...140,137,224
JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:155,213,126...155,216,449
Ensembl chr  X:155,213,132...155,216,449
JBrowse link
G Smox spermine oxidase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:131,491,858...131,525,183
Ensembl chr 2:131,491,496...131,525,922
JBrowse link
polyamine deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:89,123,303...89,128,700
Ensembl chr15:89,123,307...89,128,700
JBrowse link
G Hdac6 histone deacetylase 6 NOT ISO (PMID:28516954) UniProt PMID:28516954 NCBI chr  X:7,930,116...7,948,047
Ensembl chr  X:7,930,120...7,947,889
JBrowse link
polyamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 S-adenosylmethionine decarboxylase 1 ISO RGD PMID:10430362 RGD:1578320 NCBI chr10:40,287,458...40,302,188
Ensembl chr10:40,287,458...40,302,188
JBrowse link
G Azin1 antizyme inhibitor 1 TAS (MGI:MGI:1354413|PMID:10698696) MGI PMID:10698696 MGI:MGI:1354413 NCBI chr15:38,487,430...38,519,294
Ensembl chr15:38,487,427...38,519,266
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 TAS (MGI:MGI:893330|PMID:9210404) MGI PMID:9210404 MGI:MGI:893330 NCBI chr10:80,826,656...80,829,290
Ensembl chr10:80,826,656...80,829,290
JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 TAS (MGI:MGI:1303173|PMID:9782076) MGI PMID:9782076 MGI:MGI:1303173 NCBI chr 9:65,676,548...65,690,300
Ensembl chr 9:65,668,001...65,690,300
JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 TAS (MGI:MGI:1855813|PMID:10781085) MGI PMID:10781085 MGI:MGI:1855813 NCBI chr 3:94,433,387...94,436,651
Ensembl chr 3:94,432,414...94,443,915
JBrowse link
G Odc1 ornithine decarboxylase, structural 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr12:17,544,808...17,551,502
Ensembl chr12:17,544,794...17,551,505
JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:155,213,126...155,216,449
Ensembl chr  X:155,213,132...155,216,449
JBrowse link
G Srm spermidine synthase IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr 4:148,591,513...148,594,619
Ensembl chr 4:148,591,503...148,594,993
JBrowse link
positive regulation of acetylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor, nicotinic, alpha polypeptide 7 IC (MGI:MGI:4437154|PMID:20164328) ARUK-UCL PMID:20164328 MGI:MGI:4437154 NCBI chr 7:63,098,692...63,212,526
Ensembl chr 7:63,098,692...63,212,569
JBrowse link
positive regulation of acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pebp1 phosphatidylethanolamine binding protein 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 5:117,282,651...117,287,564
Ensembl chr 5:117,282,654...117,287,625
JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IMP (MGI:MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:MGI:5306122 NCBI chr10:89,454,234...89,533,645
Ensembl chr10:89,454,234...89,533,585
JBrowse link
positive regulation of dopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epas1 endothelial PAS domain protein 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr17:86,753,864...86,833,410
Ensembl chr17:86,753,700...86,833,410
JBrowse link
G Park7 Parkinson disease (autosomal recessive, early onset) 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:150,897,133...150,909,921
Ensembl chr 4:150,897,133...150,914,437
JBrowse link
G Vps35 VPS35 retromer complex component IMP (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chr 8:85,260,385...85,299,517
Ensembl chr 8:85,260,392...85,299,802
JBrowse link
positive regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr16:8,513,429...8,621,568
Ensembl chr16:8,513,429...8,621,568
JBrowse link
G Gpr37 G protein-coupled receptor 37 IMP (MGI:MGI:3046856|PMID:15218106) MGI PMID:15218106 MGI:MGI:3046856 NCBI chr 6:25,668,523...25,689,980
Ensembl chr 6:25,665,878...25,690,729
JBrowse link
G Hprt hypoxanthine guanine phosphoribosyl transferase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:52,988,078...53,021,660
Ensembl chr  X:52,988,137...53,021,659
JBrowse link
G Maob monoamine oxidase B ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:16,709,281...16,817,366
Ensembl chr  X:16,709,282...16,817,366
JBrowse link
G Npy neuropeptide Y ISO RGD PMID:19579268 RGD:10448966 NCBI chr 6:49,822,710...49,829,507
Ensembl chr 6:49,822,710...49,829,507
JBrowse link
positive regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IMP (MGI:MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:MGI:5306122 NCBI chr10:89,454,234...89,533,645
Ensembl chr10:89,454,234...89,533,585
JBrowse link
positive regulation of homocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr16:18,406,882...18,426,716
Ensembl chr16:18,406,886...18,426,852
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinson disease (autosomal recessive, early onset) 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:150,897,133...150,909,921
Ensembl chr 4:150,897,133...150,914,437
JBrowse link
positive regulation of spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase (exo-N4-amino) ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:140,115,735...140,134,334
Ensembl chr 7:140,115,799...140,137,224
JBrowse link
putrescine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyl transferase 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
putrescine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatine ureohydrolase (agmatinase) IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 4:141,746,675...141,759,263
Ensembl chr 4:141,746,672...141,759,263
JBrowse link
G Odc1 ornithine decarboxylase, structural 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr12:17,544,808...17,551,502
Ensembl chr12:17,544,794...17,551,505
JBrowse link
G Paox polyamine oxidase (exo-N4-amino) ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:140,115,735...140,134,334
Ensembl chr 7:140,115,799...140,137,224
JBrowse link
putrescine biosynthetic process from arginine, using agmatinase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatine ureohydrolase (agmatinase) IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 4:141,746,675...141,759,263
Ensembl chr 4:141,746,672...141,759,263
JBrowse link
putrescine biosynthetic process from ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin1 antizyme inhibitor 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr15:38,487,430...38,519,294
Ensembl chr15:38,487,427...38,519,266
JBrowse link
G Azin2 antizyme inhibitor 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 4:128,930,233...128,962,456
Ensembl chr 4:128,930,233...128,962,442
JBrowse link
G Ldc1 leucine decarboxylase 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 4:130,209,023...130,222,428
Ensembl chr 4:130,209,109...130,222,401
JBrowse link
G Odc1 ornithine decarboxylase, structural 1 IDA
IBA
(MGI:MGI:5574513|PMID:24967154)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:24967154 MGI:MGI:5574513, MGI:MGI:6201960 NCBI chr12:17,544,808...17,551,502
Ensembl chr12:17,544,794...17,551,505
JBrowse link
putrescine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase (exo-N4-amino) ISO MGI
RGD
GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 7:140,115,735...140,134,334
Ensembl chr 7:140,115,799...140,137,224
JBrowse link
putrescine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper-containing 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:48,895,255...48,909,188
Ensembl chr 6:48,872,896...48,909,188
JBrowse link
regulation of acetylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor IGI (MGI:MGI:3628883|PMID:12204217) MGI PMID:12204217 MGI:MGI:3628883 NCBI chr17:88,984,952...89,200,675
Ensembl chr17:88,984,952...89,200,675
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) IMP (MGI:MGI:4830440|PMID:19284480) UniProt PMID:19284480 MGI:MGI:4830440 NCBI chr 7:126,571,207...126,585,817
Ensembl chr 7:126,571,207...126,585,817
JBrowse link
regulation of arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh1 fumarate hydratase 1 IMP (MGI:MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:MGI:5496931 NCBI chr 1:175,601,378...175,625,635
Ensembl chr 1:175,600,374...175,625,635
JBrowse link
G Slc7a7 solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 IMP
IBA
(MGI:MGI:3760035|PMID:17376816)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:17376816, PMID:21873635 MGI:MGI:3760035, MGI:MGI:6201960 NCBI chr14:54,369,442...54,420,068
Ensembl chr14:54,369,442...54,417,780
JBrowse link
regulation of catecholamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 6:113,623,994...113,631,634
Ensembl chr 6:113,623,959...113,631,633
JBrowse link
regulation of cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins2 insulin II ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:142,678,656...142,679,726
Ensembl chr 7:142,678,656...142,743,381
JBrowse link
regulation of cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 IMP (MGI:MGI:3710059|PMID:17200146) MGI PMID:17200146 MGI:MGI:3710059 NCBI chr 3:50,364,936...50,499,087
Ensembl chr 3:49,892,526...50,443,614
JBrowse link
regulation of dopamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) IMP (MGI:MGI:3618656|PMID:11282258) MGI PMID:11282258 MGI:MGI:3618656 NCBI chr 3:89,753,448...89,764,632
Ensembl chr 3:89,746,195...89,764,632
JBrowse link
G Drd1 dopamine receptor D1 IMP (MGI:MGI:2136539|PMID:11438590) MGI PMID:11438590 MGI:MGI:2136539 NCBI chr13:54,051,183...54,055,658
Ensembl chr13:54,051,183...54,055,705
JBrowse link
G Drd4 dopamine receptor D4 IMP (MGI:MGI:1097029|PMID:9323127) MGI PMID:9323127 MGI:MGI:1097029 NCBI chr 7:141,291,974...141,296,464
Ensembl chr 7:141,292,006...141,296,464
JBrowse link
G Htr1a 5-hydroxytryptamine (serotonin) receptor 1A IMP (MGI:MGI:1927024|PMID:11080193) UniProtKB PMID:11080193 MGI:MGI:1927024 NCBI chr13:105,443,693...105,448,133
Ensembl chr13:105,443,639...105,448,122
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IDA (MGI:MGI:2671567|PMID:12915123) MGI PMID:12915123 MGI:MGI:2671567 NCBI chr 2:57,106,830...57,124,003
Ensembl chr 2:57,106,830...57,124,003
JBrowse link
G Pde1b phosphodiesterase 1B, Ca2+-calmodulin dependent IMP (MGI:MGI:3769297|PMID:17559891) MGI PMID:17559891 MGI:MGI:3769297 NCBI chr15:103,503,034...103,530,056
Ensembl chr15:103,503,034...103,530,052
JBrowse link
G Pnkd paroxysmal nonkinesiogenic dyskinesia IMP (MGI:MGI:5466578|PMID:22214848) MGI PMID:22214848 MGI:MGI:5466578 NCBI chr 1:74,284,599...74,353,692
Ensembl chr 1:74,284,930...74,353,694
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:10,840,359...12,063,370
Ensembl chr17:10,840,384...12,063,361
JBrowse link
G Slc6a3 solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 IMP (MGI:MGI:2386819|PMID:9520487), (MGI:MGI:894559|PMID:9247269) MGI PMID:9247269, PMID:9520487 MGI:MGI:2386819, MGI:MGI:894559 NCBI chr13:73,536,128...73,578,672
Ensembl chr13:73,536,747...73,578,672
JBrowse link
G Tacr3 tachykinin receptor 3 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 3:134,829,007...134,934,581
Ensembl chr 3:134,829,007...134,934,579
JBrowse link
regulation of glutamate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr18:34,220,297...34,322,190
Ensembl chr18:34,220,924...34,322,552
JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 IMP (MGI:MGI:4948153|PMID:21490221), (MGI:MGI:5616960|PMID:25429150)
(MGI:MGI:5562570|PMID:24548853)
MGI PMID:21490221, PMID:24548853, PMID:25429150 MGI:MGI:4948153, MGI:MGI:5562570, MGI:MGI:5616960 NCBI chr 3:50,364,936...50,499,087
Ensembl chr 3:49,892,526...50,443,614
JBrowse link
regulation of glutamine family amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt4 sirtuin 4 IMP (MGI:MGI:5490691|PMID:23562301) CACAO PMID:23562301 MGI:MGI:5490691 NCBI chr 5:115,478,006...115,490,264
Ensembl chr 5:115,478,010...115,484,725
JBrowse link
regulation of sulfur amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit IMP (MGI:MGI:60450|PMID:1485534) MGI PMID:1485534 MGI:MGI:60450 NCBI chr 8:84,338,631...84,640,251
Ensembl chr 8:84,338,639...84,640,246
JBrowse link
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2d22 cytochrome P450, family 2, subfamily d, polypeptide 22 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr15:82,370,527...82,380,260
Ensembl chr15:82,370,527...82,380,260
JBrowse link
G Tph2 tryptophan hydroxylase 2 IC (MGI:MGI:2652990|PMID:12584449) MGI PMID:12584449 MGI:MGI:2652990 NCBI chr10:115,078,641...115,185,022
Ensembl chr10:115,078,641...115,185,022
JBrowse link
spermidine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat1 spermidine/spermine N1-acetyl transferase 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr  X:155,213,126...155,216,449
Ensembl chr  X:155,213,132...155,216,449
JBrowse link
G Sat2 spermidine/spermine N1-acetyl transferase 2 NOT IBA
ISO
(MGI:MGI:6201960|PMID:21873635)
(PMID:15283699)
GO_Central
UniProt
PMID:15283699, PMID:21873635 MGI:MGI:6201960 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
spermidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatine ureohydrolase (agmatinase) IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 4:141,746,675...141,759,263
Ensembl chr 4:141,746,672...141,759,263
JBrowse link
G Amd1 S-adenosylmethionine decarboxylase 1 IDA
IBA
(MGI:MGI:3584197|PMID:11856372)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:11856372, PMID:21873635 MGI:MGI:3584197, MGI:MGI:6201960 NCBI chr10:40,287,458...40,302,188
Ensembl chr10:40,287,458...40,302,188
JBrowse link
G Amd2 S-adenosylmethionine decarboxylase 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr10:35,708,691...35,711,891
Ensembl chr10:35,708,675...35,711,892
JBrowse link
G Srm spermidine synthase ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 4:148,591,513...148,594,619
Ensembl chr 4:148,591,503...148,594,993
JBrowse link
spermidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 8:85,071,486...85,075,162
Ensembl chr 8:85,071,757...85,075,162
JBrowse link
G Paox polyamine oxidase (exo-N4-amino) ISO RGD
MGI
GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 7:140,115,735...140,134,334
Ensembl chr 7:140,115,799...140,137,224
JBrowse link
spermidine deacetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:89,123,303...89,128,700
Ensembl chr15:89,123,307...89,128,700
JBrowse link
G Hdac6 histone deacetylase 6 NOT ISO (PMID:28516954) UniProt PMID:28516954 NCBI chr  X:7,930,116...7,948,047
Ensembl chr  X:7,930,120...7,947,889
JBrowse link
spermidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 8:85,071,486...85,075,162
Ensembl chr 8:85,071,757...85,075,162
JBrowse link
G Sat2 spermidine/spermine N1-acetyl transferase 2 ISA (MGI:MGI:2670478|PMID:12803540) MGI PMID:12803540 MGI:MGI:2670478 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
spermine acetylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyl transferase 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
spermine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 S-adenosylmethionine decarboxylase 1 IDA
IBA
(MGI:MGI:3584197|PMID:11856372)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:11856372, PMID:21873635 MGI:MGI:3584197, MGI:MGI:6201960 NCBI chr10:40,287,458...40,302,188
Ensembl chr10:40,287,458...40,302,188
JBrowse link
G Amd2 S-adenosylmethionine decarboxylase 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr10:35,708,691...35,711,891
Ensembl chr10:35,708,675...35,711,892
JBrowse link
G Sms spermine synthase ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr  X:157,443,851...157,492,287
Ensembl chr  X:157,443,855...157,492,287
JBrowse link
spermine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase (exo-N4-amino) ISO RGD
MGI
GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 7:140,115,735...140,134,334
Ensembl chr 7:140,115,799...140,137,224
JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 TAS (MGI:MGI:2429361|PMID:12141946) MGI PMID:12141946 MGI:MGI:2429361 NCBI chr  X:155,213,126...155,216,449
Ensembl chr  X:155,213,132...155,216,449
JBrowse link
G Smox spermine oxidase IDA
ISO
(MGI:MGI:2429361|PMID:12141946) MGI
RGD
PMID:12141946 GO_REF:0000096, MGI:MGI:2429361, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 2:131,491,858...131,525,183
Ensembl chr 2:131,491,496...131,525,922
JBrowse link
spermine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sat2 spermidine/spermine N1-acetyl transferase 2 ISA (MGI:MGI:2670478|PMID:12803540) MGI PMID:12803540 MGI:MGI:2670478 NCBI chr11:69,621,996...69,624,032
Ensembl chr11:69,622,024...69,623,870
JBrowse link
G Sms spermine synthase IMP (MGI:MGI:1197776|PMID:9467015) MGI PMID:9467015 MGI:MGI:1197776 NCBI chr  X:157,443,851...157,492,287
Ensembl chr  X:157,443,855...157,492,287
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd amino carboxymuconate semialdehyde decarboxylase ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr 1:127,729,413...127,767,564
Ensembl chr 1:127,729,413...127,767,978
JBrowse link
G Afmid arylformamidase IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr11:117,825,503...117,839,908
Ensembl chr11:117,825,924...117,839,908
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 8:24,584,133...24,596,952
Ensembl chr 8:24,584,136...24,597,009
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 8:24,531,892...24,576,414
Ensembl chr 8:24,531,892...24,576,333
JBrowse link
G Kmo kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) IEA UniProtKB GO_REF:0000002, MGI:MGI:2152098 NCBI chr 1:175,632,193...175,660,853
Ensembl chr 1:175,620,381...175,662,116
JBrowse link
G Kynu kynureninase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:43,555,258...43,683,048
Ensembl chr 2:43,555,329...43,682,715
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase IEA UniProtKB GO_REF:0000004, MGI:MGI:1354194 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:43,555,258...43,683,048
Ensembl chr 2:43,555,329...43,682,715
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO
IBA
(MGI:MGI:6201960|PMID:21873635) RGD
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase IDA
IBA
(MGI:MGI:3587527|PMID:15866519)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:15866519, PMID:21873635 MGI:MGI:3587527, MGI:MGI:6201960 NCBI chr11:117,825,503...117,839,908
Ensembl chr11:117,825,924...117,839,908
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 ISO
IBA
IDA
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:2151782|PMID:2419335), (MGI:MGI:2156954|PMID:11751753)
RGD
GO_Central
MGI
PMID:2419335, PMID:11751753, PMID:21873635 GO_REF:0000096, MGI:MGI:2151782, MGI:MGI:2156954, MGI:MGI:4417868, MGI:MGI:6201960 NCBI chr 8:24,584,133...24,596,952
Ensembl chr 8:24,584,136...24,597,009
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 IDA
IBA
ISO
IMP
(MGI:MGI:3712725|PMID:17499941)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:3719924|PMID:17671174)
MGI
GO_Central
PMID:17499941, PMID:17671174, PMID:21873635 GO_REF:0000096, MGI:MGI:3712725, MGI:MGI:3719924, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 8:24,531,892...24,576,414
Ensembl chr 8:24,531,892...24,576,333
JBrowse link
G Kynu kynureninase IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:43,555,258...43,683,048
Ensembl chr 2:43,555,329...43,682,715
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link
tryptophan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, Cu++ transporting, alpha polypeptide IMP (MGI:MGI:53851|PMID:4147174) MGI PMID:4147174 MGI:MGI:53851 NCBI chr  X:106,027,224...106,128,161
Ensembl chr  X:106,027,276...106,124,926
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 3:81,958,412...81,975,728
Ensembl chr 3:81,957,090...81,976,202
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23369
    metabolic process 11273
      organic substance metabolic process 10738
        organonitrogen compound metabolic process 6247
          amine metabolic process 95
            2-aminobenzenesulfonate metabolic process + 0
            amine biosynthetic process + 20
            amine catabolic process + 14
            cellular amine metabolic process + 86
            cytokinin metabolic process + 1
            methane biosynthetic process from dimethylamine + 0
            methane biosynthetic process from trimethylamine + 0
            methylamine metabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.