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ONTOLOGY REPORT - ANNOTATIONS

Term:deoxyribonucleotide catabolic process
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Accession:GO:0009264 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: deoxyribonucleotide breakdown;   deoxyribonucleotide catabolism;   deoxyribonucleotide degradation


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deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA InterPro GO_REF:0000002 NCBI chr27:30,675,225...30,741,202
Ensembl chr27:30,675,247...30,817,388 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10681516) InterPro
MGI
Ensembl		 PMID:10681516 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380 		JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063 		JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160 		JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983 		JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,808,454...17,815,987
Ensembl chr15:17,808,461...17,815,676 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,482,384...63,513,538
Ensembl chr 6:63,436,236...63,513,478 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:11,682,304...11,693,143
Ensembl chr25:11,581,206...11,692,284 		JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935 		JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7731963)
(PMID:7592575)
(PMID:7670465)
(PMID:14607964), (PMID:9478961)		 Ensembl
MGI		 PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923 		JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:5,583,795...5,659,355
Ensembl chr13:5,583,801...5,659,463 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380 		JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (PMID:7744869) MGI PMID:7744869 NCBI chr18:108,215...120,213 JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570 		JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:35,139,580...35,144,066
Ensembl chr25:35,140,969...35,143,063 		JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chr12:11,715,215...11,718,622
Ensembl chr12:11,715,271...11,718,717 		JBrowse link
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:85,506,598...85,586,212
Ensembl chr 1:85,444,917...85,586,163 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380 		JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983 		JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chr28:15,525,581...15,621,287
Ensembl chr28:15,526,790...15,621,235 		JBrowse link
G UOX urate oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,482,384...63,513,538
Ensembl chr 6:63,436,236...63,513,478 		JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:11,682,304...11,693,143
Ensembl chr25:11,581,206...11,692,284 		JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935 		JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:25,623,997...25,676,336
Ensembl chr24:25,626,134...25,680,902 		JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (PMID:20081199) MGI PMID:20081199 NCBI chr23:28,498,730...28,500,998
Ensembl chr23:28,498,652...28,499,998 		JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in
NOT|involved_in		 ISO (PMID:12077348)
(PMID:15772079)		 MGI
UniProt		 PMID:12077348 PMID:15772079 NCBI chr18:108,215...120,213 JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570 		JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923 		JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:5,583,795...5,659,355
Ensembl chr13:5,583,801...5,659,463 		JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380 		JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12234672) Ensembl
MGI		 PMID:12234672 GO_REF:0000107 NCBI chr 5:42,080,654...42,117,919
Ensembl chr 5:42,080,645...42,117,741 		JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (PMID:14154460) MGI PMID:14154460 NCBI chr18:108,215...120,213 JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:1315924 PMID:3032103 GO_REF:0000002 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr30:14,572,766...14,585,621
Ensembl chr30:14,572,602...14,585,530 		JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,342,793...5,344,432
Ensembl chr 9:5,343,378...5,344,380 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17099
    cellular process 16593
      metabolic process 10707
        catabolic process 2471
          carbohydrate derivative catabolic process 265
            deoxyribonucleotide catabolic process 22
              purine deoxyribonucleotide catabolic process + 14
              pyrimidine deoxyribonucleotide catabolic process + 8
Path 2
Term Annotations click to browse term
  biological_process 17099
    cellular process 16593
      metabolic process 10707
        primary metabolic process 9412
          nucleobase-containing compound metabolic process 5141
            nucleobase-containing small molecule metabolic process 668
              nucleoside phosphate metabolic process 643
                nucleotide metabolic process 511
                  deoxyribonucleotide metabolic process 41
                    deoxyribonucleotide catabolic process 22
                      purine deoxyribonucleotide catabolic process + 14
                      pyrimidine deoxyribonucleotide catabolic process + 8
paths to the root