ONTOLOGY REPORT - ANNOTATIONS
Term: deoxyribonucleotide metabolic process
Accession: GO:0009262
browse the term
Definition: The chemical reactions and pathways involving a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms: exact_synonym: deoxyribonucleotide metabolism
alt_id: GO:0009122; GO:0009393
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Rrm2
ribonucleotide reductase regulatory subunit M2
acts_upstream_of_or_within
ISO
(PMID:12655059)
RGD
PMID:12655059
NCBI chr 6:41,339,858...41,346,774
Ensembl chr 6:41,340,557...41,346,773
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Tk2
thymidine kinase 2
acts_upstream_of_or_within
ISO
MGI:3808750 (PMID:18467430)
RGD
PMID:18467430
NCBI chr19:708,859...731,786
Ensembl chr19:708,891...730,924
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Rrm1
ribonucleotide reductase catalytic subunit M1
involved_in
ISO
(PMID:16376858) (PMID:12578384)
RGD
PMID:12578384 PMID:16376858
NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261
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Rrm2
ribonucleotide reductase regulatory subunit M2
involved_in
ISO IEA
(PMID:16376858) (PMID:12578384) GO_REF:0000107
RGD Ensembl
PMID:12578384 PMID:16376858
GO_REF:0000107
NCBI chr 6:41,339,858...41,346,774
Ensembl chr 6:41,340,557...41,346,773
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Rrm2b
ribonucleotide reductase regulatory TP53 inducible subunit M2B
involved_in
ISO
(PMID:16376858)
RGD
PMID:16376858
NCBI chr 7:69,077,024...69,108,742
Ensembl chr 7:69,078,291...69,108,633
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Nudt18
nudix hydrolase 18
involved_in
ISO ISS
(PMID:22556419) GO_REF:0000024
RGD UniProt
PMID:22556419
GO_REF:0000024
NCBI chr15:45,650,597...45,653,985
Ensembl chr15:45,650,664...45,653,963
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Ada
adenosine deaminase
involved_in
IEA ISO
GO_REF:0000107 MGI:1857117 (PMID:10720488)
Ensembl RGD
PMID:10720488
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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Nt5c1a
5'-nucleotidase, cytosolic IA
involved_in
ISO
(PMID:11133996)
RGD
PMID:11133996
NCBI chr 5:135,473,107...135,494,400
Ensembl chr 5:135,473,231...135,499,338
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Pnp
purine nucleoside phosphorylase
involved_in
ISO
(PMID:6771276)
RGD
PMID:6771276
NCBI chr15:24,170,607...24,178,269
Ensembl chr15:24,170,602...24,203,986
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Uox
urate oxidase
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029
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Urad
ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
involved_in
ISO
(PMID:16462750)
RGD
PMID:16462750
NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923
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Xdh
xanthine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:8064675)
Ensembl RGD
PMID:8064675
GO_REF:0000107
NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
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Adk
adenosine kinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:2835956)
Ensembl RGD
PMID:2835956
GO_REF:0000107
NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510
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Dck
deoxycytidine kinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:8748457)
Ensembl RGD
PMID:8748457
GO_REF:0000107
NCBI chr14:19,305,218...19,326,247
Ensembl chr14:19,305,218...19,326,247
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Dguok
deoxyguanosine kinase
involved_in
ISO
(PMID:19221117)
RGD
PMID:19221117
NCBI chr 4:115,987,101...116,014,733
Ensembl chr 4:115,979,094...116,014,733
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Adk
adenosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12163459)
Ensembl RGD
PMID:12163459
GO_REF:0000107
NCBI chr15:2,863,241...3,246,453
Ensembl chr15:2,863,244...3,246,510
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Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2155977|MGI:2683027 (PMID:14607964), (PMID:7592575), (PMID:7670465), (PMID:7731963), (PMID:9478961)
Ensembl RGD
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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Samhd1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
ISO
(PMID:24141705)
RGD
PMID:24141705
NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
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Ak2
adenylate kinase 2
IDA
RGD
PMID:5010295
RGD:5490216
NCBI chr 5:141,308,650...141,364,633
Ensembl chr 5:141,346,063...141,364,632
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Ak3
adenylate kinase 3
IDA
RGD
PMID:5010295
RGD:5490216
NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
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Guk1
guanylate kinase 1
IDA
RGD
PMID:4307347
RGD:5147877
NCBI chr10:43,971,514...43,988,658
Ensembl chr10:43,971,509...43,980,107
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Oga
O-GlcNAcase
IMP
RGD
PMID:17573462
RGD:2305953
NCBI chr 1:244,598,285...244,633,835
Ensembl chr 1:244,598,292...244,634,359
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Cmpk1
cytidine/uridine monophosphate kinase 1
IDA
RGD
PMID:192455
RGD:5133256
NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
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Dpyd
dihydropyrimidine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:5472365)
Ensembl RGD
PMID:5472365
GO_REF:0000107
NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982
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Dpys
dihydropyrimidinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:5472365)
Ensembl RGD
PMID:5472365
GO_REF:0000107
NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231
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Nt5c
5', 3'-nucleotidase, cytosolic
involved_in
ISO
(PMID:6301357)
RGD
PMID:6301357
NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
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Upb1
beta-ureidopropionase 1
involved_in
ISO
(PMID:5472365)
RGD
PMID:5472365
NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590
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Upp1
uridine phosphorylase 1
involved_in
ISO
(PMID:7744869)
RGD
PMID:7744869
NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
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Upp2
uridine phosphorylase 2
involved_in
ISO
(PMID:12849978)
RGD
PMID:12849978
NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417
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Dctpp1
dCTP pyrophosphatase 1
involved_in
ISO IBA ISS
(PMID:24467396) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:24467396
GO_REF:0000024 GO_REF:0000033
NCBI chr 1:181,877,440...181,880,833
Ensembl chr 1:181,877,437...181,880,839
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Rrm1
ribonucleotide reductase catalytic subunit M1
involved_in
IBA ISO
GO_REF:0000033 (PMID:19176520)
GO_Central RGD
PMID:19176520
GO_REF:0000033
NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261
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Rrm2
ribonucleotide reductase regulatory subunit M2
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:19176520) GO_REF:0000033
UniProt RGD GO_Central
PMID:19176520
GO_REF:0000024 GO_REF:0000033
NCBI chr 6:41,339,858...41,346,774
Ensembl chr 6:41,340,557...41,346,773
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Rrm2b
ribonucleotide reductase regulatory TP53 inducible subunit M2B
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:11517226)
GO_Central RGD
PMID:11517226
GO_REF:0000033
NCBI chr 7:69,077,024...69,108,742
Ensembl chr 7:69,078,291...69,108,633
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Dera
deoxyribose-phosphate aldolase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:170,663,689...170,742,469
Ensembl chr 4:170,663,665...170,758,865
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Nt5c
5', 3'-nucleotidase, cytosolic
acts_upstream_of_or_within
ISO
(PMID:10681516)
RGD
PMID:10681516
NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
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Samhd1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
ISO
(PMID:23601106), (PMID:26294762)
RGD
PMID:23601106 PMID:26294762
NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
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Guk1
guanylate kinase 1
involved_in
IDA ISO
(PMID:31201273)
RGD
PMID:31201273 PMID:4307347
RGD:5147877
NCBI chr10:43,971,514...43,988,658
Ensembl chr10:43,971,509...43,980,107
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Nudt18
nudix hydrolase 18
involved_in
ISO ISS
(PMID:22556419) GO_REF:0000024
RGD UniProt
PMID:22556419
GO_REF:0000024
NCBI chr15:45,650,597...45,653,985
Ensembl chr15:45,650,664...45,653,963
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Dnph1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1
involved_in
IDA
PMID:17234634
MGI
PMID:17234634
RGD:8553712
NCBI chr 9:14,481,296...14,484,034
Ensembl chr 9:14,481,066...14,484,022
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Gda
guanine deaminase
involved_in
IEA ISO
GO_REF:0000107 (PMID:8064675)
Ensembl RGD
PMID:8064675
GO_REF:0000107
NCBI chr 1:218,903,045...218,982,360
Ensembl chr 1:218,906,815...218,982,416
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Nt5c
5', 3'-nucleotidase, cytosolic
involved_in
ISO
(PMID:10681516)
RGD
PMID:10681516
NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
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Nt5c1a
5'-nucleotidase, cytosolic IA
involved_in
ISO
(PMID:11133996)
RGD
PMID:11133996
NCBI chr 5:135,473,107...135,494,400
Ensembl chr 5:135,473,231...135,499,338
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Nt5c2
5'-nucleotidase, cytosolic II
involved_in
ISO
(PMID:5560407)
RGD
PMID:5560407
NCBI chr 1:245,770,993...245,896,925
Ensembl chr 1:245,772,277...245,897,913
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Uox
urate oxidase
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029
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Urad
ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
involved_in
ISO
(PMID:16462750)
RGD
PMID:16462750
NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923
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Xdh
xanthine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:29895374), (PMID:30936145), (PMID:8226898)
Ensembl RGD
PMID:8226898 PMID:29895374 PMID:30936145
GO_REF:0000107
NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
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Guk1
guanylate kinase 1
IDA
RGD
PMID:4307347
RGD:5147877
NCBI chr10:43,971,514...43,988,658
Ensembl chr10:43,971,509...43,980,107
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Nt5c2
5'-nucleotidase, cytosolic II
involved_in
IDA ISO
PMID:6260203 (PMID:1659319), (PMID:9371705)
RGD
PMID:1659319 PMID:9371705 PMID:6260203
RGD:151356611
NCBI chr 1:245,770,993...245,896,925
Ensembl chr 1:245,772,277...245,897,913
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Nudt15
nudix hydrolase 15
involved_in
ISO IBA
(PMID:22556419) GO_REF:0000033
RGD GO_Central
PMID:22556419
GO_REF:0000033
NCBI chr15:48,707,776...48,713,847
Ensembl chr15:48,709,700...48,747,363
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Samhd1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
involved_in
ISO IBA
(PMID:24217394) GO_REF:0000033
RGD GO_Central
PMID:24217394
GO_REF:0000033
NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
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Dguok
deoxyguanosine kinase
acts_upstream_of_or_within
ISO
(PMID:1664183), (PMID:7918681)
RGD
PMID:1664183 PMID:7918681
NCBI chr 4:115,987,101...116,014,733
Ensembl chr 4:115,979,094...116,014,733
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Nudt16
nudix hydrolase 16
acts_upstream_of_or_within
ISO
MGI:96622 (PMID:20081199)
RGD
PMID:20081199
NCBI chr 8:105,739,927...105,741,982
Ensembl chr 8:105,739,623...105,741,998
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Cmpk2
cytidine/uridine monophosphate kinase 2
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:192455
GO_REF:0000033, RGD:5133256
NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
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Dtymk
deoxythymidylate kinase
acts_upstream_of_or_within involved_in
IDA ISO IBA
(PMID:8845311) GO_REF:0000033 (PMID:12614151)
RGD GO_Central
PMID:8845311 PMID:12614151 PMID:220041
GO_REF:0000033, RGD:5133687
NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
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Dut
deoxyuridine triphosphatase
involved_in
ISO
(PMID:10952785), (PMID:15322254)
RGD
PMID:10952785 PMID:15322254
NCBI chr 3:112,498,864...112,509,994
Ensembl chr 3:112,498,982...112,510,771
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Shmt1
serine hydroxymethyltransferase 1
involved_in
ISO
(PMID:19513116)
RGD
PMID:19513116
NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820
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Tyms
thymidylate synthetase
involved_in
IDA ISO IBA IEA
(PMID:22057276) GO_REF:0000033 GO_REF:0000002 (PMID:11278511), (PMID:15093541), (PMID:8845352)
RGD GO_Central InterPro
PMID:8845352 PMID:11278511 PMID:15093541 PMID:22057276 PMID:9894005
GO_REF:0000002 GO_REF:0000033, RGD:1545055
NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
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Nt5c
5', 3'-nucleotidase, cytosolic
involved_in
ISO
(PMID:6301357)
RGD
PMID:6301357
NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
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Tymp
thymidine phosphorylase
involved_in
ISO
MGI:2183547 (PMID:12077348)
RGD
PMID:12077348
NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874 Ensembl chr 7:120,438,770...120,443,874
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Upp1
uridine phosphorylase 1
involved_in NOT|involved_in
ISO
MGI:3699164 (PMID:12077348) MGI:3699164 (PMID:15772079)
RGD
PMID:12077348 PMID:15772079
NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
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Cmpk2
cytidine/uridine monophosphate kinase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
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Dtymk
deoxythymidylate kinase
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:220041
GO_REF:0000033, RGD:5133687
NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
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Tbpl1
TATA-box binding protein like 1
acts_upstream_of_or_within
ISO
MGI:2182539 (PMID:11861477)
RGD
PMID:11861477
NCBI chr 1:22,777,892...22,803,305
Ensembl chr 1:22,778,459...22,803,122 Ensembl chr 1:22,778,459...22,803,122
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Tyms
thymidylate synthetase
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
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Dctpp1
dCTP pyrophosphatase 1
NOT|involved_in
ISO
(PMID:24467396)
RGD
PMID:24467396
NCBI chr 1:181,877,440...181,880,833
Ensembl chr 1:181,877,437...181,880,839
G
Cmpk1
cytidine/uridine monophosphate kinase 1
IDA
RGD
PMID:3010881
RGD:5133253
NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
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Cmpk2
cytidine/uridine monophosphate kinase 2
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:192455
GO_REF:0000033, RGD:5133256
NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
G
Dtymk
deoxythymidylate kinase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
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AABR07001512.1
involved_in
IEA IBA
GO_REF:0000041 GO_REF:0000033
UniProt GO_Central
GO_REF:0000033 GO_REF:0000041
Ensembl chr 1:48,369,044...48,369,595
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Dut
deoxyuridine triphosphatase
involved_in
IDA IBA IEA
GO_REF:0000033 GO_REF:0000041
GO_Central UniProt RGD
PMID:3032103 PMID:1315924
GO_REF:0000033 GO_REF:0000041, RGD:2300191 , RGD:2301218
NCBI chr 3:112,498,864...112,509,994
Ensembl chr 3:112,498,982...112,510,771
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ENSRNOG00000069939
involved_in
IEA
GO_REF:0000041
UniProt
GO_REF:0000041
Ensembl chr13:67,763,505...67,765,634
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Dpyd
dihydropyrimidine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:5472365)
Ensembl RGD
PMID:5472365
GO_REF:0000107
NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982
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Dpys
dihydropyrimidinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:5472365)
Ensembl RGD
PMID:5472365
GO_REF:0000107
NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231
G
Nt5c
5', 3'-nucleotidase, cytosolic
involved_in
ISO
(PMID:10681516)
RGD
PMID:10681516
NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
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Nt5m
5',3'-nucleotidase, mitochondrial
acts_upstream_of_or_within
ISO
(PMID:12234672)
RGD
PMID:12234672
NCBI chr10:44,652,845...44,680,549
Ensembl chr10:44,652,975...44,679,150
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Upb1
beta-ureidopropionase 1
involved_in
ISO
(PMID:5472365)
RGD
PMID:5472365
NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590
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Upp1
uridine phosphorylase 1
involved_in
ISO
(PMID:14154460)
RGD
PMID:14154460
NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
G
AABR07001512.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:48,369,044...48,369,595
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Dut
deoxyuridine triphosphatase
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:3032103 PMID:1315924
GO_REF:0000033, RGD:2300191 , RGD:2301218
NCBI chr 3:112,498,864...112,509,994
Ensembl chr 3:112,498,982...112,510,771
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ENSRNOG00000069939
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr13:67,763,505...67,765,634
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Nt5c
5', 3'-nucleotidase, cytosolic
involved_in
ISO IBA
(PMID:10681516) GO_REF:0000033
RGD GO_Central
PMID:10681516
GO_REF:0000033
NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954
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Nt5m
5',3'-nucleotidase, mitochondrial
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:44,652,845...44,680,549
Ensembl chr10:44,652,975...44,679,150
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all