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ONTOLOGY REPORT - ANNOTATIONS

Term:ribonucleotide biosynthetic process
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Accession:GO:0009260 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: ribonucleotide anabolism;   ribonucleotide biosynthesis;   ribonucleotide formation;   ribonucleotide synthesis

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'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936621:655,004...667,608
Ensembl chrNW_004936621:655,008...664,762 		JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936526:6,342,233...6,380,736
Ensembl chrNW_004936526:6,342,221...6,380,840 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:1,782,581...1,809,458
Ensembl chrNW_004936586:1,782,528...1,810,010 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,750,928...8,782,303
Ensembl chrNW_004936500:8,753,463...8,786,236 		JBrowse link
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,483,688...1,499,716
Ensembl chrNW_004936595:1,483,689...1,501,364 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:18,606,124...18,648,989
Ensembl chrNW_004936482:18,606,124...18,648,681 		JBrowse link
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004936474:22,611,037...22,633,208
Ensembl chrNW_004936474:22,602,800...22,633,169 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004936470:5,889,393...5,988,558
Ensembl chrNW_004936470:5,888,469...5,988,525 		JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:9332377 GO_REF:0000041 GO_REF:0000107 RGD:70804 NCBI chrNW_004936586:1,782,581...1,809,458
Ensembl chrNW_004936586:1,782,528...1,810,010 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936500:8,750,928...8,782,303
Ensembl chrNW_004936500:8,753,463...8,786,236 		JBrowse link
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936595:1,483,688...1,499,716
Ensembl chrNW_004936595:1,483,689...1,501,364 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936482:18,606,124...18,648,989
Ensembl chrNW_004936482:18,606,124...18,648,681 		JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936493:5,308,268...5,332,934
Ensembl chrNW_004936493:5,310,228...5,332,918 		JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936475:21,863,627...21,877,660
Ensembl chrNW_004936475:21,862,166...21,877,711 		JBrowse link
G Umps uridine monophosphate synthetase involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936725:553,278...564,846
Ensembl chrNW_004936725:549,804...565,141 		JBrowse link
'de novo' XMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:1,782,581...1,809,458
Ensembl chrNW_004936586:1,782,528...1,810,010 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,750,928...8,782,303
Ensembl chrNW_004936500:8,753,463...8,786,236 		JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chrNW_004936479:15,523,342...15,540,229
Ensembl chrNW_004936479:15,523,037...15,540,173 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:748,777...753,582
Ensembl chrNW_004936529:745,511...753,581 		JBrowse link
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,483,688...1,499,716
Ensembl chrNW_004936595:1,483,689...1,501,364 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:18,606,124...18,648,989
Ensembl chrNW_004936482:18,606,124...18,648,681 		JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2448448|PMID:12414806) MGI
Ensembl		 PMID:12414806 GO_REF:0000107 MGI:2448448 NCBI chrNW_004936818:863,969...975,562
Ensembl chrNW_004936818:864,180...974,989 		JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:1,437,108...1,516,382
Ensembl chrNW_004936735:1,436,153...1,516,378 		JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:594,647...626,016
Ensembl chrNW_004936551:591,695...626,056 		JBrowse link
G Acly ATP citrate lyase involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936490:16,758,001...16,798,152
Ensembl chrNW_004936490:16,757,985...16,798,237 		JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2151932|PMID:11150295) MGI
Ensembl		 PMID:11150295 GO_REF:0000107 MGI:2151932 NCBI chrNW_004936620:739,633...800,472
Ensembl chrNW_004936620:739,633...800,803 		JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:2151932 NCBI chrNW_004936561:5,794,685...5,842,619
Ensembl chrNW_004936561:5,795,077...5,842,676 		JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chrNW_004936778:49,130...123,345
Ensembl chrNW_004936778:49,122...123,458 		JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:9869665) RGD
UniProt		 PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 RGD:1600790 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:23,867,117...23,870,832
Ensembl chrNW_004936474:23,867,347...23,871,223 		JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short chain family member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936620:739,633...800,472
Ensembl chrNW_004936620:739,633...800,803 		JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:7487891 GO_REF:0000002 GO_REF:0000107 RGD:1599112 NCBI chrNW_004936612:2,395,452...2,437,592
Ensembl chrNW_004936612:2,393,071...2,437,522 		JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in ISO
IEA		 RGD
Ensembl		 PMID:7487891 GO_REF:0000107 RGD:1599112 NCBI chrNW_004936479:16,247,230...16,271,597
Ensembl chrNW_004936479:16,243,829...16,271,616 		JBrowse link
G Mpc1 mitochondrial pyruvate carrier 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:5428352 NCBI chrNW_004936489:16,179,321...16,181,991
Ensembl chrNW_004936489:16,179,810...16,184,020 		JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within
involved_in		 ISO (MGI:5576400|PMID:24910426)
(MGI:5428352|PMID:22628558)		 MGI PMID:22628558 PMID:24910426 MGI:5428352 MGI:5576400 NCBI chrNW_004936481:18,253,929...18,259,738 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:3817854|PMID:18586888) RGD
Ensembl
MGI
InterPro		 PMID:7487891 PMID:18586888 GO_REF:0000002 GO_REF:0000107 MGI:3817854 RGD:1599112 NCBI chrNW_004936844:889,720...906,631
Ensembl chrNW_004936844:889,635...909,586 		JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936717:2,377,982...2,379,137 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:7487891 GO_REF:0000002 GO_REF:0000107 RGD:1599112 NCBI chrNW_004936473:2,580,642...2,586,266
Ensembl chrNW_004936473:2,580,618...2,586,266 		JBrowse link
G Pdhx pyruvate dehydrogenase complex component X involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936533:3,153,461...3,215,891
Ensembl chrNW_004936533:3,154,314...3,215,819 		JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 involved_in ISO
IEA		 RGD
UniProt		 PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401
Ensembl chrNW_004936487:15,507,498...15,517,469 		JBrowse link
G Ak2 adenylate kinase 2 involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:5123889 GO_REF:0000002 GO_REF:0000104 RGD:5490208 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 involved_in ISO
IEA		 RGD
UniProt		 PMID:5010295 PMID:5123889 GO_REF:0000104 RGD:5490208 RGD:5490216 NCBI chrNW_004936503:497,391...517,011
Ensembl chrNW_004936503:496,965...516,888 		JBrowse link
G Ak4 adenylate kinase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO (MGI:55148|PMID:7323947) GOC PMID:7323947 MGI:55148 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800 		JBrowse link
G Adsl adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt		 PMID:3759987 PMID:11428554 RGD:5135303 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936621:655,004...667,608
Ensembl chrNW_004936621:655,008...664,762 		JBrowse link
G Adss2 adenylosuccinate synthase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:64874|PMID:8308018) MGI
Ensembl
InterPro		 PMID:8308018 GO_REF:0000002 GO_REF:0000107 MGI:64874 NCBI chrNW_004936526:6,342,233...6,380,736
Ensembl chrNW_004936526:6,342,221...6,380,840 		JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936499:7,114,838...7,136,468
Ensembl chrNW_004936499:7,115,780...7,136,449 		JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936470:2,547,038...2,576,951
Ensembl chrNW_004936470:2,546,985...2,576,953 		JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004936503:497,391...517,011
Ensembl chrNW_004936503:496,965...516,888 		JBrowse link
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adk adenosine kinase involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800 		JBrowse link
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6751570|PMID:25681585) MGI PMID:25681585 MGI:6751570 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (MGI:6751570|PMID:25681585) MGI PMID:25681585 MGI:6751570 NCBI chrNW_004936621:655,004...667,608
Ensembl chrNW_004936621:655,008...664,762 		JBrowse link
G Aprt adenine phosphoribosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:85816|PMID:8864750) MGI
Ensembl
UniProt		 PMID:8864750 GO_REF:0000041 GO_REF:0000107 MGI:85816 NCBI chrNW_004936641:913,674...916,312
Ensembl chrNW_004936641:913,475...918,748 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936691:650,753...694,362
Ensembl chrNW_004936691:652,769...694,463 		JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,418,090...12,423,959
Ensembl chrNW_004936501:12,418,090...12,422,689 		JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936517:743,036...752,836
Ensembl chrNW_004936517:742,791...753,336 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936477:22,416,505...22,417,543
Ensembl chrNW_004936477:22,416,539...22,417,543 		JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936750:1,716,752...1,725,700
Ensembl chrNW_004936750:1,716,757...1,725,727 		JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936500:8,444,681...8,454,694
Ensembl chrNW_004936500:8,444,546...8,456,048 		JBrowse link
G ATP6 ATP synthase F0 subunit 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr MT:7,947...8,627 JBrowse link
G ATP8 ATP synthase F0 subunit 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr MT:7,786...7,992 JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101970352 L-lactate dehydrogenase C chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:827,322...862,832
Ensembl chrNW_004936528:827,758...862,393 		JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,061,297...4,215,912
Ensembl chrNW_004936585:4,058,877...4,215,942 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:14985420 GO_REF:0000002 GO_REF:0000043 RGD:2312640 NCBI chrNW_004936478:20,310,509...20,477,506
Ensembl chrNW_004936478:20,310,503...20,456,141 		JBrowse link
G Adcy10 adenylate cyclase 10 involved_in ISO
IEA		 RGD
Ensembl		 PMID:7225326 PMID:9874775 PMID:16627466 PMID:16964251 GO_REF:0000107 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chrNW_004936481:18,274,158...18,330,136
Ensembl chrNW_004936481:18,274,154...18,330,173 		JBrowse link
G Adcy2 adenylate cyclase 2 involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:11738086 PMID:12711600 GO_REF:0000002 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chrNW_004936643:47,830...338,891
Ensembl chrNW_004936643:47,837...339,007 		JBrowse link
G Adcy3 adenylate cyclase 3 involved_in ISO
IEA		 RGD
Ensembl
InterPro
UniProt		 PMID:12711600 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2312674 NCBI chrNW_004936493:7,250,194...7,333,433
Ensembl chrNW_004936493:7,250,194...7,335,691 		JBrowse link
G Adcy4 adenylate cyclase 4 involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:11738086 PMID:12711600 GO_REF:0000002 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chrNW_004936722:213,916...230,802
Ensembl chrNW_004936722:213,916...230,906 		JBrowse link
G Adcy5 adenylate cyclase 5 involved_in ISO
IEA		 RGD
Ensembl
UniProt
InterPro		 PMID:10894801 PMID:11738086 PMID:12711600 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chrNW_004936725:1,751,272...1,897,937
Ensembl chrNW_004936725:1,751,266...1,897,946 		JBrowse link
G Adcy6 adenylate cyclase 6 involved_in ISO
IEA		 RGD
UniProt
Ensembl
InterPro		 PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 More... GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chrNW_004936512:6,612,708...6,629,202
Ensembl chrNW_004936512:6,615,012...6,629,165 		JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO
IEA		 RGD
Ensembl
InterPro
UniProt		 PMID:12711600 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2312674 NCBI chrNW_004936475:3,368,069...3,393,306
Ensembl chrNW_004936475:3,340,800...3,394,698 		JBrowse link
G Adcy8 adenylate cyclase 8 involved_in ISO
IEA		 RGD
UniProt
InterPro		 PMID:16741924 PMID:19305019 PMID:19444869 GO_REF:0000002 GO_REF:0000043 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chrNW_004936470:17,831,644...18,047,868
Ensembl chrNW_004936470:17,831,639...18,047,868 		JBrowse link
G Adcy9 adenylate cyclase 9 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814) RGD
Ensembl
MGI		 PMID:7575502 PMID:8662814 PMID:19444869 GO_REF:0000107 MGI:76465 MGI:80863 RGD:2312785 NCBI chrNW_004936694:336,269...449,490
Ensembl chrNW_004936694:336,269...452,943 		JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779
Ensembl chrNW_004936474:28,147,085...28,182,043 		JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640061|PMID:16614755) MGI
Ensembl
InterPro		 PMID:16614755 GO_REF:0000002 GO_REF:0000107 MGI:3640061 NCBI chrNW_004936576:2,353,874...2,411,747
Ensembl chrNW_004936576:2,353,761...2,411,425 		JBrowse link
G Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936551:1,573,930...1,814,685
Ensembl chrNW_004936551:1,575,356...1,814,697 		JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936576:2,427,451...2,469,946
Ensembl chrNW_004936576:2,427,416...2,470,072 		JBrowse link
G Gucy2c guanylate cyclase 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1097012|PMID:9294128) UniProt
GOC		 PMID:9294128 GO_REF:0000043 MGI:1097012 NCBI chrNW_004936587:2,742,911...2,811,139
Ensembl chrNW_004936587:2,742,911...2,810,969 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936595:1,235,747...1,250,294
Ensembl chrNW_004936595:1,235,711...1,250,354 		JBrowse link
G LOC101964576 guanylate cyclase soluble subunit beta-2-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936565:3,877,047...3,930,198 JBrowse link
G Nppa natriuretic peptide A acts_upstream_of ISO (PMID:1672777) GO_Central
RGD		 PMID:1672777 PMID:10559136 RGD:619660 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:683,325...684,662
Ensembl chrNW_004936474:683,325...684,665 		JBrowse link
G Nppc natriuretic peptide C acts_upstream_of
involved_in		 ISO
IEA		 (PMID:1672777)
(MGI:2177134|PMID:11259675)		 GO_Central
Ensembl		 PMID:1672777 PMID:11259675 GO_REF:0000107 MGI:2177134 NCBI chrNW_004936525:5,092,675...5,099,344
Ensembl chrNW_004936525:5,092,635...5,099,331 		JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2179542|PMID:11997476) Ensembl
GOC
UniProt		 PMID:11997476 GO_REF:0000043 GO_REF:0000107 MGI:2179542 NCBI chrNW_004936580:3,479,858...3,496,896
Ensembl chrNW_004936580:3,480,267...3,495,643 		JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:1672777) GO_Central
Ensembl
UniProt		 PMID:1672777 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936524:3,779,398...3,798,074
Ensembl chrNW_004936524:3,779,392...3,798,501 		JBrowse link
CMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936598:3,819,239...3,846,692
Ensembl chrNW_004936598:3,817,994...3,843,241 		JBrowse link
G Uck1 uridine-cytidine kinase 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936487:18,267,878...18,271,406
Ensembl chrNW_004936487:18,267,885...18,271,423 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936481:19,505,477...19,560,035
Ensembl chrNW_004936481:19,505,459...19,560,083 		JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:594,647...626,016
Ensembl chrNW_004936551:591,695...626,056 		JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:1,112,021...1,191,190
Ensembl chrNW_004936623:1,112,338...1,191,064 		JBrowse link
G Coasy Coenzyme A synthase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2181228|PMID:11980892) MGI
Ensembl
InterPro		 PMID:11980892 GO_REF:0000002 GO_REF:0000107 MGI:2181228 NCBI chrNW_004936490:17,318,873...17,323,080
Ensembl chrNW_004936490:17,318,785...17,323,508 		JBrowse link
G Dcakd dephospho-CoA kinase domain containing involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936541:1,362,744...1,383,274
Ensembl chrNW_004936541:1,362,577...1,383,321 		JBrowse link
G Pank1 pantothenate kinase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3607004|PMID:16040613)
(MGI:4461354|PMID:20559429), (MGI:5446555|PMID:22815849)		 MGI
InterPro
Ensembl		 PMID:16040613 PMID:20559429 PMID:22815849 GO_REF:0000002 GO_REF:0000107 MGI:3607004 MGI:4461354 MGI:5446555 NCBI chrNW_004936601:4,578,132...4,639,305
Ensembl chrNW_004936601:4,578,394...4,638,170 		JBrowse link
G Pank2 pantothenate kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5446555|PMID:22815849) InterPro
MGI
Ensembl		 PMID:22815849 GO_REF:0000002 GO_REF:0000107 MGI:5446555 NCBI chrNW_004936485:14,785,050...14,804,258
Ensembl chrNW_004936485:14,785,467...14,811,117 		JBrowse link
G Pank3 pantothenate kinase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3607004|PMID:16040613) MGI
InterPro
Ensembl		 PMID:16040613 GO_REF:0000002 GO_REF:0000107 MGI:3607004 NCBI chrNW_004936622:810,016...836,103
Ensembl chrNW_004936622:809,880...828,849 		JBrowse link
G Pank4 pantothenate kinase 4 (inactive) involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936737:1,049,467...1,064,548
Ensembl chrNW_004936737:1,048,597...1,065,364 		JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936474:23,867,117...23,870,832
Ensembl chrNW_004936474:23,867,347...23,871,223 		JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,936,721...33,958,439
Ensembl chrNW_004936471:33,936,531...33,958,573
Ensembl chrNW_004936471:33,936,531...33,958,573 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936474:22,611,037...22,633,208
Ensembl chrNW_004936474:22,602,800...22,633,169 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:5,889,393...5,988,558
Ensembl chrNW_004936470:5,888,469...5,988,525 		JBrowse link
G LOC101972188 nucleoside diphosphate kinase A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182
Ensembl chrNW_004936490:10,633,454...10,649,914 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936694:2,222,055...2,222,977
Ensembl chrNW_004936694:2,221,915...2,222,814 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:553,931...557,744 JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936531:7,296,565...7,318,628
Ensembl chrNW_004936531:7,296,556...7,318,682 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:88,929...96,207
Ensembl chrNW_004936529:88,949...96,236 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936481:17,280,661...17,438,496
Ensembl chrNW_004936481:17,280,464...17,438,084 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:608,139...649,754
Ensembl chrNW_004936540:606,868...649,789 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936487:18,267,878...18,271,406
Ensembl chrNW_004936487:18,267,885...18,271,423 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936481:19,505,477...19,560,035
Ensembl chrNW_004936481:19,505,459...19,560,083 		JBrowse link
G Uckl1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936514:11,144,641...11,156,470
Ensembl chrNW_004936514:11,144,026...11,156,455 		JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925
Ensembl chrNW_004936659:1,955,559...1,962,758 		JBrowse link
FMN biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rfk riboflavin kinase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936503:11,921,125...11,930,562
Ensembl chrNW_004936503:11,919,982...11,930,622 		JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479
Ensembl chrNW_004936864:76,128...79,520 		JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:1,782,581...1,809,458
Ensembl chrNW_004936586:1,782,528...1,810,010 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,750,928...8,782,303
Ensembl chrNW_004936500:8,753,463...8,786,236 		JBrowse link
G Gmps guanine monophosphate synthase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:8089153) RGD
UniProt
InterPro
Ensembl
MGI		 PMID:3436958 PMID:8089153 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:1599004 NCBI chrNW_004936519:3,094,763...3,143,322
Ensembl chrNW_004936519:3,104,701...3,141,549 		JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936479:15,523,342...15,540,229
Ensembl chrNW_004936479:15,523,037...15,540,173 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936529:748,777...753,582
Ensembl chrNW_004936529:745,511...753,581 		JBrowse link
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
G Pfas phosphoribosylformylglycinamidine synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,483,688...1,499,716
Ensembl chrNW_004936595:1,483,689...1,501,364 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:18,606,124...18,648,989
Ensembl chrNW_004936482:18,606,124...18,648,681 		JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:6730049|PMID:718989) MGI PMID:718989 MGI:6730049 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adk adenosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:4,560,078...5,023,780
Ensembl chrNW_004936521:4,557,971...5,023,800 		JBrowse link
G Ampd1 adenosine monophosphate deaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936627:33,350...57,231
Ensembl chrNW_004936627:33,350...57,166 		JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:913,674...916,312
Ensembl chrNW_004936641:913,475...918,748 		JBrowse link
G Gmps guanine monophosphate synthase involved_in ISO PMID:6180773 MGI PMID:6180773 RGD:150521637 NCBI chrNW_004936519:3,094,763...3,143,322
Ensembl chrNW_004936519:3,104,701...3,141,549 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1331314|PMID:10037486) MGI
Ensembl		 PMID:10037486 GO_REF:0000107 MGI:1331314 NCBI chrNW_004936691:650,753...694,362
Ensembl chrNW_004936691:652,769...694,463 		JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:748,777...753,582
Ensembl chrNW_004936529:745,511...753,581 		JBrowse link
G LOC101972188 nucleoside diphosphate kinase A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 nucleoside diphosphate phosphorylation RGD
InterPro		 PMID:1316151 PMID:8142475 GO_REF:0000002 RGD:2299082 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182
Ensembl chrNW_004936490:10,633,454...10,649,914 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936694:2,222,055...2,222,977
Ensembl chrNW_004936694:2,221,915...2,222,814 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:553,931...557,744 JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936531:7,296,565...7,318,628
Ensembl chrNW_004936531:7,296,556...7,318,682 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:88,929...96,207
Ensembl chrNW_004936529:88,949...96,236 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936481:17,280,661...17,438,496
Ensembl chrNW_004936481:17,280,464...17,438,084 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:608,139...649,754
Ensembl chrNW_004936540:606,868...649,789 		JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (MGI:5506958|PMID:23911318)
(PMID:23911318)		 MGI PMID:23911318 MGI:5506958 NCBI chrNW_004936704:1,092,180...1,111,722
Ensembl chrNW_004936704:1,099,816...1,113,887 		JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within ISO (MGI:87193|PMID:9133604)
(MGI:5506958|PMID:23911318), (MGI:5512796|PMID:23542464), (MGI:5529149|PMID:23078545)		 MGI PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 MGI:5506958 MGI:5512796 MGI:5529149 MGI:87193 NCBI chrNW_004936528:7,847,156...7,891,585
Ensembl chrNW_004936528:7,848,096...7,890,627 		JBrowse link
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936627:33,350...57,231
Ensembl chrNW_004936627:33,350...57,166 		JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chrNW_004936704:1,092,180...1,111,722
Ensembl chrNW_004936704:1,099,816...1,113,887 		JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chrNW_004936528:7,847,156...7,891,585
Ensembl chrNW_004936528:7,848,096...7,890,627 		JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:913,674...916,312
Ensembl chrNW_004936641:913,475...918,748 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936691:650,753...694,362
Ensembl chrNW_004936691:652,769...694,463 		JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936484:568,056...650,820
Ensembl chrNW_004936484:566,543...650,896 		JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936554:4,425,518...4,484,853
Ensembl chrNW_004936554:4,425,495...4,484,887 		JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936499:5,456,985...5,540,115
Ensembl chrNW_004936499:5,456,986...5,540,144 		JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936486:2,952,379...2,992,148
Ensembl chrNW_004936486:2,967,522...2,991,154 		JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936647:3,153,586...3,208,935
Ensembl chrNW_004936647:3,153,485...3,213,582 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936474:24,765,173...24,769,903
Ensembl chrNW_004936474:24,764,718...24,769,947 		JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936600:3,619,549...3,623,495
Ensembl chrNW_004936600:3,618,572...3,623,540 		JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936510:10,246,901...10,276,049
Ensembl chrNW_004936510:10,246,356...10,276,753 		JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936476:7,536,635...7,618,271 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936563:1,224,392...1,344,707
Ensembl chrNW_004936563:1,221,233...1,344,810 		JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936480:7,642,188...7,711,245
Ensembl chrNW_004936480:7,642,187...7,711,250 		JBrowse link
G LOC101955374 elongation of very long chain fatty acids protein 5-like involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004938951:187...1,346 JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936490:927,769...1,191,483
Ensembl chrNW_004936490:927,769...1,191,481 		JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936769:950,970...1,053,671
Ensembl chrNW_004936769:950,845...1,051,887 		JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:7,114,856...7,337,179
Ensembl chrNW_004936525:7,114,849...7,337,185 		JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Eno1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183 		JBrowse link
G Hnf1a HNF1 homeobox A ISO RGD PMID:20841353 RGD:150540305 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004936498:6,626,334...6,636,973
Ensembl chrNW_004936498:6,624,986...6,637,078 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:7,114,856...7,337,179
Ensembl chrNW_004936525:7,114,849...7,337,185 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of
involved_in		 ISO
IEA		 (PMID:31574452) ARUK-UCL
Ensembl		 PMID:31574452 GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731
Ensembl chrNW_004936509:1,990,116...2,077,938 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004936809:1,160,265...1,168,956
Ensembl chrNW_004936809:1,160,247...1,171,097 		JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:2,668,525...2,670,611
Ensembl chrNW_004936470:2,668,016...2,670,770 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:594,647...626,016
Ensembl chrNW_004936551:591,695...626,056 		JBrowse link
proton motive force-driven ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936517:743,036...752,836
Ensembl chrNW_004936517:742,791...753,336 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936588:612,255...614,894
Ensembl chrNW_004936588:611,725...617,782 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936530:1,509,605...1,513,033
Ensembl chrNW_004936530:1,509,605...1,513,175 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:12,549,045...12,551,895
Ensembl chrNW_004936490:12,548,813...12,552,278 		JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:10,908,915...10,918,445
Ensembl chrNW_004936512:10,908,881...10,918,445 		JBrowse link
G Atp5mc3 ATP synthase membrane subunit c locus 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936509:4,836,148...4,839,330 JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936477:22,416,505...22,417,543
Ensembl chrNW_004936477:22,416,539...22,417,543 		JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936594:354,416...359,415
Ensembl chrNW_004936594:353,980...359,414 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936500:8,444,681...8,454,694
Ensembl chrNW_004936500:8,444,546...8,456,048 		JBrowse link
G ATP6 ATP synthase F0 subunit 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:7,947...8,627 JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936536:1,257,801...1,314,770
Ensembl chrNW_004936536:1,257,990...1,312,530 		JBrowse link
G ATP8 ATP synthase F0 subunit 8 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:7,786...7,992 JBrowse link
G LOC101961097 ATP synthase subunit epsilon, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:18,136,669...18,137,026 JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:743,036...752,836
Ensembl chrNW_004936517:742,791...753,336 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:612,255...614,894
Ensembl chrNW_004936588:611,725...617,782 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:1,509,605...1,513,033
Ensembl chrNW_004936530:1,509,605...1,513,175 		JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,416,505...22,417,543
Ensembl chrNW_004936477:22,416,539...22,417,543 		JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:1,716,752...1,725,700
Ensembl chrNW_004936750:1,716,757...1,725,727 		JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:354,416...359,415
Ensembl chrNW_004936594:353,980...359,414 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,444,681...8,454,694
Ensembl chrNW_004936500:8,444,546...8,456,048 		JBrowse link
G ATP6 ATP synthase F0 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:7,947...8,627 JBrowse link
G LOC101961097 ATP synthase subunit epsilon, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,136,669...18,137,026 JBrowse link
G Stoml2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,129,149...3,132,405
Ensembl chrNW_004936524:3,129,148...3,133,056 		JBrowse link
purine ribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000117 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Coasy Coenzyme A synthase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936490:17,318,873...17,323,080
Ensembl chrNW_004936490:17,318,785...17,323,508 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936818:863,969...975,562
Ensembl chrNW_004936818:864,180...974,989 		JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936735:1,437,108...1,516,382
Ensembl chrNW_004936735:1,436,153...1,516,378 		JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:2,597,593...2,633,780
Ensembl chrNW_004936509:2,597,452...2,633,780 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,534,412...11,549,128
Ensembl chrNW_004936490:11,534,243...11,549,642 		JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:141,745...213,495
Ensembl chrNW_004936624:142,402...213,528 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936585:4,701,012...4,713,421
Ensembl chrNW_004936585:4,700,418...4,714,450 		JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3628986|PMID:16636270)
(MGI:3629421|PMID:16734431)		 MGI
Ensembl		 PMID:16636270 PMID:16734431 GO_REF:0000107 MGI:3628986 MGI:3629421 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Sphk2 sphingosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,668,708...2,676,608
Ensembl chrNW_004936664:2,669,920...2,676,587 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936643:2,339,073...2,354,780
Ensembl chrNW_004936643:2,339,070...2,354,784 		JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,895,771...2,897,761
Ensembl chrNW_004936543:2,897,068...2,897,745 		JBrowse link
succinyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmut methylmalonyl-CoA mutase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:11,208,251...11,241,648
Ensembl chrNW_004936476:11,208,267...11,241,648 		JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,308,268...5,332,934
Ensembl chrNW_004936493:5,310,228...5,332,918 		JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:3010881 GO_REF:0000107 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779
Ensembl chrNW_004936474:28,147,085...28,182,043 		JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:21,863,627...21,877,660
Ensembl chrNW_004936475:21,862,166...21,877,711 		JBrowse link
G Umps uridine monophosphate synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936725:553,278...564,846
Ensembl chrNW_004936725:549,804...565,141 		JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 acts_upstream_of_or_within ISO (MGI:84399|PMID:8951040) GOC PMID:8951040 MGI:84399 NCBI chrNW_004936487:18,267,878...18,271,406
Ensembl chrNW_004936487:18,267,885...18,271,423 		JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO
IEA		 RGD
Ensembl		 PMID:6134725 GO_REF:0000107 RGD:5132277 NCBI chrNW_004936725:553,278...564,846
Ensembl chrNW_004936725:549,804...565,141 		JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004936683:1,432,004...1,454,004
Ensembl chrNW_004936683:1,431,965...1,454,991 		JBrowse link
UMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,543,295...6,564,575
Ensembl chrNW_004936474:6,543,220...6,566,308 		JBrowse link
G Uck1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936487:18,267,878...18,271,406
Ensembl chrNW_004936487:18,267,885...18,271,423 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936481:19,505,477...19,560,035
Ensembl chrNW_004936481:19,505,459...19,560,083 		JBrowse link
G Uckl1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936514:11,144,641...11,156,470
Ensembl chrNW_004936514:11,144,026...11,156,455 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chrNW_004936493:5,308,268...5,332,934
Ensembl chrNW_004936493:5,310,228...5,332,918 		JBrowse link
G LOC101972188 nucleoside diphosphate kinase A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182
Ensembl chrNW_004936490:10,633,454...10,649,914 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936694:2,222,055...2,222,977
Ensembl chrNW_004936694:2,221,915...2,222,814 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:553,931...557,744 JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936531:7,296,565...7,318,628
Ensembl chrNW_004936531:7,296,556...7,318,682 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:88,929...96,207
Ensembl chrNW_004936529:88,949...96,236 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936481:17,280,661...17,438,496
Ensembl chrNW_004936481:17,280,464...17,438,084 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:608,139...649,754
Ensembl chrNW_004936540:606,868...649,789 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15015
    metabolic process 9426
      organic substance metabolic process 9062
        organophosphate metabolic process 787
          ribose phosphate metabolic process 289
            ribonucleotide metabolic process 287
              ribonucleotide biosynthetic process 163
                FMN biosynthetic process 1
                prenyl-FMNH2 biosynthetic process 0
                purine ribonucleotide biosynthetic process + 149
                pyrimidine ribonucleotide biosynthetic process + 21
Path 2
Term Annotations click to browse term
  biological_process 15015
    metabolic process 9426
      cellular metabolic process 7401
        cellular aromatic compound metabolic process 4689
          nucleobase-containing compound metabolic process 4490
            nucleobase-containing small molecule metabolic process 460
              nucleoside phosphate metabolic process 407
                nucleotide metabolic process 400
                  nucleotide biosynthetic process 211
                    ribonucleotide biosynthetic process 163
                      FMN biosynthetic process 1
                      prenyl-FMNH2 biosynthetic process 0
                      purine ribonucleotide biosynthetic process + 149
                      pyrimidine ribonucleotide biosynthetic process + 21
paths to the root