Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleotide metabolic process
go back to main search page
Accession:GO:0009259 term browser browse the term
Definition:The chemical reactions and pathways involving a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: ribonucleotide metabolism
 alt_id: GO:0009121


show annotations for term's descendants           Sort by:
 
ribonucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:4078017 RGD:2301990 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
G Rnaseh2b ribonuclease H2 subunit B ISO (MGI:MGI:5435090|PMID:22802351) MGI PMID:22802351 MGI:MGI:5435090 NCBI chrNW_004936565:3,791,305...3,839,991 JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 RGD:70804 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 ISO (MGI:MGI:2448448|PMID:12414806)
(PMID:14747722), (PMID:23207770)
MGI
CAFA
PMID:12414806, PMID:14747722, PMID:23207770 MGI:MGI:2448448 NCBI chrNW_004936818:863,969...975,562 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101964456 ectonucleotide pyrophosphatase/phosphodiesterase family member 1 ISO (PMID:7830796) BHF-UCL PMID:7830796 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 ISO (PMID:12923182) CAFA PMID:12923182 NCBI chrNW_004936664:2,626,810...2,655,290 JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acly ATP citrate lyase ISO (PMID:1371749) BHF-UCL PMID:1371749 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 ISO (PMID:16788062)
(MGI:MGI:2151932|PMID:11150295)
UniProtKB
MGI
PMID:11150295, PMID:16788062 MGI:MGI:2151932 NCBI chrNW_004936620:739,633...800,472 JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 ISO (MGI:MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:MGI:2151932 NCBI chrNW_004936561:5,794,685...5,842,619 JBrowse link
G Mlycd malonyl-CoA decarboxylase ISO (PMID:10417274), (PMID:10455107), (PMID:9869665) RGD
UniProtKB
PMID:9869665, PMID:10417274, PMID:10455107, PMID:17316539 RGD:1600790 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase ISO (PMID:29754768) UniProt PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936612:2,395,452...2,437,592 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 ISO (PMID:19081061) UniProtKB
RGD
PMID:7487891, PMID:19081061 RGD:1599112 NCBI chrNW_004936844:889,720...906,631 JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936717:2,377,982...2,379,137 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta ISO (PMID:19081061) RGD
UniProtKB
PMID:7487891, PMID:19081061 RGD:1599112 NCBI chrNW_004936473:2,580,642...2,586,266 JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) UniProt PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
acetyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 ISO RGD PMID:16476568 RGD:2317620 NCBI chrNW_004936497:13,242,644...13,269,007 JBrowse link
G Acaca acetyl-CoA carboxylase alpha ISO (MGI:MGI:4840155|PMID:20952656) UniProtKB PMID:20952656 MGI:MGI:4840155 NCBI chrNW_004936490:927,769...1,191,483 JBrowse link
G Acacb acetyl-CoA carboxylase beta ISO (PMID:20952656) UniProtKB PMID:20952656 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
G Acly ATP citrate lyase ISO RGD PMID:18062843 RGD:2317315 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acot12 acyl-CoA thioesterase 12 ISO (MGI:MGI:2450440|PMID:12545200) MGI PMID:12545200 MGI:MGI:2450440 NCBI chrNW_004936469:635,663...681,373 JBrowse link
G Cs citrate synthase ISO RGD PMID:818082, PMID:938457, PMID:5820645 RGD:2306824, RGD:2306825, RGD:2306828 NCBI chrNW_004936646:676,926...704,988 JBrowse link
G Fasn fatty acid synthase ISO RGD PMID:18062843 RGD:2317315 NCBI chrNW_004936594:5,591,785...5,609,886 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO (PMID:23751782) UniProt PMID:23751782 NCBI chrNW_004936627:4,451,847...4,473,163 JBrowse link
acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase short/branched chain ISO PMID:8660691 MGI PMID:8660691 RGD:631739 NCBI chrNW_004936486:11,668,099...11,707,946 JBrowse link
G Acot12 acyl-CoA thioesterase 12 ISO PMID:11322891 HGNC PMID:11322891 RGD:633789 NCBI chrNW_004936469:635,663...681,373 JBrowse link
G Acot4 acyl-CoA thioesterase 4 ISO (PMID:16940157)
(MGI:MGI:3663233|PMID:16940157)
HGNC PMID:16940157 MGI:MGI:3663233 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
G Acot8 acyl-CoA thioesterase 8 ISO PMID:11785945
(MGI:MGI:2156286|PMID:11673457)
(PMID:9153233), (PMID:9299485)
UniProt
MGI
UniProtKB
PMID:9153233, PMID:9299485, PMID:11673457, PMID:11785945 MGI:MGI:2156286, RGD:70235 NCBI chrNW_004936514:7,166,392...7,180,537 JBrowse link
G Acot9 acyl-CoA thioesterase 9 ISO (MGI:MGI:1928308|PMID:10383425) HGNC PMID:10383425 MGI:MGI:1928308 NCBI chrNW_004936624:795,272...834,441 JBrowse link
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial ISO (MGI:MGI:3619815|PMID:15878874) MGI PMID:15878874 MGI:MGI:3619815 NCBI chrNW_004936486:2,754,753...2,823,600 JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 ISO (PMID:18238778) UniProtKB PMID:18238778 NCBI chrNW_004936785:967,871...1,007,761 JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:2573547 RGD:1599519 NCBI chrNW_004936474:8,955,216...8,971,078 JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:15870076 RGD:1625002 NCBI chrNW_004936530:2,401,053...2,425,989 JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial ISO (PMID:15668256) HGNC PMID:15668256 NCBI chrNW_004936473:17,298,641...17,302,954 JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295, PMID:5123889 RGD:5490208, RGD:5490216 NCBI chrNW_004936503:497,391...517,011 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:5529149|PMID:23078545)
(MGI:MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545, PMID:23439682 MGI:MGI:5476853, MGI:MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Bad BCL2 associated agonist of cell death ISO (MGI:MGI:3778846|PMID:18223655) UniProtKB PMID:18223655 MGI:MGI:3778846 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase ISO (PMID:11428554) RGD
UniProtKB
PMID:3759987, PMID:11428554 RGD:5135303 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 ISO (PMID:15786719) UniProtKB PMID:15786719 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 ISO (MGI:MGI:64874|PMID:8308018)
(PMID:2004783)
MGI
UniProtKB
PMID:2004783, PMID:8308018 MGI:MGI:64874 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936470:2,547,038...2,576,951 JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5'-nucleotidase ecto ISO (MGI:MGI:3770326|PMID:16547283) RGD
MGI
PMID:16547283, PMID:21414400 MGI:MGI:3770326, RGD:5134346 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak4 adenylate kinase 4 ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 ISO (MGI:MGI:5489878|PMID:22212473) CACAO PMID:22212473 MGI:MGI:5489878 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:5529149|PMID:23078545)
(MGI:MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545, PMID:23439682 MGI:MGI:5476853, MGI:MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak9 adenylate kinase 9 ISO (PMID:23416111) UniProtKB PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO (PMID:17510399), (PMID:21106936) UniProtKB PMID:17510399, PMID:21106936 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chrNW_004936490:12,549,045...12,551,895 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004936556:226,643...263,517 JBrowse link
G LOC101970352 L-lactate dehydrogenase C chain ISO (MGI:MGI:3775056|PMID:18367675) MGI PMID:18367675 MGI:MGI:3775056 NCBI chrNW_004936528:827,322...862,832 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555, PMID:5492954 RGD:2302789, RGD:2302790 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Slc25a13 solute carrier family 25 member 13 ISO (PMID:12851387) UniProtKB PMID:12851387 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
ATP generation from ADP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 ISO (PMID:23416111) UniProtKB PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Adcy10 adenylate cyclase 10 ISO (PMID:12609998), (PMID:15659711) RGD
UniProtKB
PMID:7225326, PMID:9874775, PMID:12609998, PMID:15659711, PMID:16627466, PMID:16964251 RGD:1299450, RGD:2313171, RGD:2313173, RGD:2313177 NCBI chrNW_004936481:18,274,158...18,330,136 JBrowse link
G Adcy2 adenylate cyclase 2 ISO PMID:18164588
PMID:10427002
RGD
BHF-UCL
UniProt
PMID:10427002, PMID:11738086, PMID:12711600, PMID:18164588 RGD:10400857, RGD:2312641, RGD:2312674, RGD:8553431 NCBI chrNW_004936643:47,830...338,891 JBrowse link
G Adcy3 adenylate cyclase 3 ISO (MGI:MGI:1889935|PMID:11055432)
PMID:24363043
RGD
UniProtKB
UniProt
PMID:11055432, PMID:12711600, PMID:24363043 MGI:MGI:1889935, RGD:10400870, RGD:2312674 NCBI chrNW_004936493:7,250,194...7,333,433 JBrowse link
G Adcy4 adenylate cyclase 4 ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209, PMID:11738086, PMID:12711600 RGD:2312641, RGD:2312674, RGD:8554340 NCBI chrNW_004936722:213,916...230,802 JBrowse link
G Adcy5 adenylate cyclase 5 ISO (PMID:24740569)
(PMID:15385642), (PMID:24700542)
UniProtKB
RGD
PMID:10894801, PMID:11738086, PMID:12711600, PMID:15385642, PMID:24700542, PMID:24740569 RGD:2312641, RGD:2312674, RGD:2315006 NCBI chrNW_004936725:1,751,272...1,897,937 JBrowse link
G Adcy6 adenylate cyclase 6 ISO (MGI:MGI:4457984|PMID:20466003)
(PMID:17916776), (PMID:18403039)
RGD
UniProtKB
PMID:10866989, PMID:10894801, PMID:11738086, PMID:12711600, PMID:15579502, PMID:15961389, PMID:17916776, PMID:18403039, PMID:18971210, PMID:20466003 MGI:MGI:4457984, RGD:1598749, RGD:2312641, RGD:2312654, RGD:2312674, RGD:2312678, RGD:2313211, RGD:2315006 NCBI chrNW_004936512:6,612,708...6,629,202 JBrowse link
G Adcy7 adenylate cyclase 7 ISO (PMID:11113152), (PMID:17760784) UniProtKB
RGD
PMID:11113152, PMID:12711600, PMID:17760784 RGD:2312674 NCBI chrNW_004936475:3,368,069...3,393,306 JBrowse link
G Adcy8 adenylate cyclase 8 ISO RGD PMID:16741924, PMID:19305019, PMID:19444869 RGD:2312769, RGD:2312785, RGD:7241269 NCBI chrNW_004936470:17,831,644...18,047,868 JBrowse link
G Adcy9 adenylate cyclase 9 ISO (MGI:MGI:76465|PMID:7575502), (MGI:MGI:80863|PMID:8662814)
(PMID:10987815), (PMID:9628827)
MGI
UniProtKB
RGD
PMID:7575502, PMID:8662814, PMID:9628827, PMID:10987815, PMID:19444869 MGI:MGI:76465, MGI:MGI:80863, RGD:2312785 NCBI chrNW_004936694:336,269...449,490 JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chrNW_004936480:8,123,437...9,235,586 JBrowse link
cAMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO (MGI:MGI:76872|PMID:7595494) MGI PMID:7595494 MGI:MGI:76872 NCBI chrNW_004936469:25,494,820...25,745,783 JBrowse link
G Epha2 EPH receptor A2 ISO (PMID:27385333) UniProtKB PMID:27385333 NCBI chrNW_004936474:3,648,395...3,673,856 JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 ISO (PMID:29775581)
PMID:15041191
(PMID:3529090)
UniProt
CAFA
PMID:3529090, PMID:15041191, PMID:29775581 RGD:2302788 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Eno2 enolase 2 ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Foxk1 forkhead box K1 ISO (PMID:30700909) UniProt PMID:30700909 NCBI chrNW_004936765:1,126,168...1,255,354 JBrowse link
G Foxk2 forkhead box K2 ISO (MGI:MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:MGI:6281052 NCBI chrNW_004936923:109,973...166,952 JBrowse link
G Pfkm phosphofructokinase, muscle ISO (MGI:MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 ISO (PMID:23505436)
(MGI:MGI:3640061|PMID:16614755)
UniProtKB
MGI
PMID:16614755, PMID:23505436 MGI:MGI:3640061 NCBI chrNW_004936576:2,353,874...2,411,747 JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 ISO (PMID:23505436) UniProtKB PMID:23505436 NCBI chrNW_004936576:2,427,451...2,469,946 JBrowse link
G Gucy2d guanylate cyclase 2D, retinal ISO (MGI:MGI:5049799|PMID:21598940) UniProt PMID:21598940 MGI:MGI:5049799 NCBI chrNW_004936595:1,235,747...1,250,294 JBrowse link
G Nppa natriuretic peptide A ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chrNW_004936474:683,325...684,662 JBrowse link
G Nppc natriuretic peptide C ISO (PMID:1672777)
(MGI:MGI:2177134|PMID:11259675)
UniProtKB PMID:1672777, PMID:11259675 MGI:MGI:2177134 NCBI chrNW_004936525:5,092,675...5,099,344 JBrowse link
G Npr1 natriuretic peptide receptor 1 ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chrNW_004936580:3,479,858...3,496,896 JBrowse link
G Npr2 natriuretic peptide receptor 2 ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chrNW_004936524:3,779,398...3,798,074 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chrNW_004936509:10,819,067...11,142,964 JBrowse link
G Pde2a phosphodiesterase 2A ISO (MGI:MGI:4420377|PMID:19632989)
(PMID:19828435)
UniProtKB PMID:19632989, PMID:19828435 MGI:MGI:4420377 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Pde5a phosphodiesterase 5A ISO (MGI:MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:MGI:2450821 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A ISO (PMID:25799991)
(MGI:MGI:5634842|PMID:25799991)
(MGI:MGI:1266874|PMID:9624145)
UniProtKB PMID:9624145, PMID:25799991 MGI:MGI:1266874, MGI:MGI:5634842 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
cGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:66348|PMID:7518067), (MGI:MGI:68066|PMID:3038581) MGI PMID:3038581, PMID:7518067 MGI:MGI:66348, MGI:MGI:68066 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Pde5a phosphodiesterase 5A ISO (MGI:MGI:4361111|PMID:19474061), (MGI:MGI:4834094|PMID:20511540) MGI PMID:19474061, PMID:20511540 MGI:MGI:4361111, MGI:MGI:4834094 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A ISO (PMID:9624146) UniProtKB PMID:9624146 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
G Rora RAR related orphan receptor A ISO (MGI:MGI:66348|PMID:7518067) MGI PMID:7518067 MGI:MGI:66348 NCBI chrNW_004936471:21,402,056...21,567,908 JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Coasy Coenzyme A synthase ISO (MGI:MGI:2181228|PMID:11980892)
(PMID:11923312)
MGI
UniProtKB
PMID:11923312, PMID:11980892 MGI:MGI:2181228 NCBI chrNW_004936490:17,318,873...17,323,080 JBrowse link
G Pank1 pantothenate kinase 1 ISO (MGI:MGI:3607004|PMID:16040613)
(MGI:MGI:4461354|PMID:20559429), (MGI:MGI:5446555|PMID:22815849)
MGI PMID:16040613, PMID:20559429, PMID:22815849 MGI:MGI:3607004, MGI:MGI:4461354, MGI:MGI:5446555 NCBI chrNW_004936601:4,578,132...4,639,305 JBrowse link
G Pank2 pantothenate kinase 2 ISO (MGI:MGI:5446555|PMID:22815849) MGI PMID:22815849 MGI:MGI:5446555 NCBI chrNW_004936485:14,785,050...14,804,258 JBrowse link
G Pank3 pantothenate kinase 3 ISO (MGI:MGI:3607004|PMID:16040613)
(PMID:20797618)
(PMID:30927326)
MGI
UniProtKB
UniProt
PMID:16040613, PMID:20797618, PMID:30927326 MGI:MGI:3607004 NCBI chrNW_004936622:810,016...836,103 JBrowse link
G Ppcdc phosphopantothenoylcysteine decarboxylase ISO (PMID:11923312) UniProtKB PMID:11923312 NCBI chrNW_004936471:33,958,705...33,983,026 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase ISO (PMID:29754768)
(PMID:11923312)
UniProt
UniProtKB
PMID:11923312, PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) MGI PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
coenzyme A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Crot carnitine O-octanoyltransferase ISO (MGI:MGI:5546000|PMID:15492013) UniProtKB PMID:15492013 MGI:MGI:5546000 NCBI chrNW_004936763:1,425,394...1,462,638 JBrowse link
G Mccc2 methylcrotonoyl-CoA carboxylase 2 ISO RGD PMID:3995077 RGD:2316862 NCBI chrNW_004936549:4,760,073...4,830,190 JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 ISO (PMID:16179339)
(PMID:24870241)
UniProtKB PMID:16179339, PMID:24870241 NCBI chrNW_004936474:22,611,037...22,633,208 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479 JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004936555:5,929,262...5,932,334 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle ISO (MGI:MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B ISO (PMID:10625657) BHF-UCL
RGD
PMID:8255543, PMID:10625657 RGD:2302804 NCBI chrNW_004936524:9,584,302...9,592,961 JBrowse link
G Eno1 enolase 1 ISO PMID:7964722 CAFA PMID:7964722 RGD:12792993 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Eno2 enolase 2 ISO RGD PMID:8255543 RGD:2302804 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Eno4 enolase 4 ISO (MGI:MGI:5516566|PMID:23446454) MGI PMID:23446454 MGI:MGI:5516566 NCBI chrNW_004936486:6,760,400...6,785,098 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO RGD PMID:8255543, PMID:28258188 RGD:13792662, RGD:2302804 NCBI chrNW_004936709:1,243,149...1,247,782 JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO (MGI:MGI:3513747|PMID:15546993), (MGI:MGI:4421119|PMID:19759366) MGI PMID:15546993, PMID:19759366 MGI:MGI:3513747, MGI:MGI:4421119 NCBI chrNW_004936570:819,562...830,072 JBrowse link
G Gck glucokinase ISO RGD PMID:4273555, PMID:4353083 RGD:2302790, RGD:2302851 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Gpi glucose-6-phosphate isomerase ISO (MGI:MGI:3526465|PMID:15665293)
(MGI:MGI:83399|PMID:8417789)
MGI PMID:8417789, PMID:15665293 MGI:MGI:3526465, MGI:MGI:83399 NCBI chrNW_004936570:1,582,120...1,608,537 JBrowse link
G Hk1 hexokinase 1 ISO RGD PMID:4353083, PMID:8255543, PMID:15574336 RGD:1358232, RGD:2302804, RGD:2302851 NCBI chrNW_004936521:9,067,062...9,139,112 JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 ISO (PMID:11069105) UniProtKB PMID:11069105 NCBI chrNW_004936557:5,559,993...5,584,912 JBrowse link
G Pfkl phosphofructokinase, liver type ISO (PMID:22923583), (PMID:6227635), (PMID:6444532) UniProtKB
RGD
PMID:2931076, PMID:4273555, PMID:4353083, PMID:6227635, PMID:6444532, PMID:6458283, PMID:22923583 RGD:2301239, RGD:2302736, RGD:2302790, RGD:2302851 NCBI chrNW_004936500:94,016...117,598 JBrowse link
G Pfkm phosphofructokinase, muscle ISO (PMID:6444532) UniProtKB
RGD
PMID:2931076, PMID:6444532, PMID:8593533 RGD:1599363, RGD:2302736 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
G Pfkp phosphofructokinase, platelet ISO RGD PMID:2931076, PMID:8255543 RGD:2302736, RGD:2302804 NCBI chrNW_004936484:11,105,814...11,161,238 JBrowse link
G Pgam1 phosphoglycerate mutase 1 ISO (PMID:22590500) UniProtKB PMID:22590500 NCBI chrNW_004936636:2,240,452...2,248,689 JBrowse link
G Pgam2 phosphoglycerate mutase 2 ISO (PMID:6262916)
(MGI:MGI:3526465|PMID:15665293)
UniProtKB
MGI
PMID:6262916, PMID:15665293 MGI:MGI:3526465 NCBI chrNW_004936478:19,021,928...19,026,110 JBrowse link
G Pgk1 phosphoglycerate kinase 1 ISO (PMID:7391028)
(MGI:MGI:3526465|PMID:15665293)
CAFA
MGI
RGD
PMID:3091090, PMID:6405813, PMID:7391028, PMID:15665293 MGI:MGI:3526465, RGD:2302859, RGD:2302860 NCBI chrNW_004936547:286,267...310,062 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555, PMID:4353083 RGD:2302790, RGD:2302851 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pkm pyruvate kinase M1/2 ISO PMID:1883388
(MGI:MGI:55033|PMID:7262549), (MGI:MGI:55100|PMID:7295297)
RGD
CAFA
MGI
PMID:1883388, PMID:4273555, PMID:7262549, PMID:7295297, PMID:8255543 MGI:MGI:55033, MGI:MGI:55100, RGD:12793012, RGD:2302790, RGD:2302804 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 ISO (MGI:MGI:3583413|PMID:15857891) MGI PMID:15857891 MGI:MGI:3583413 NCBI chrNW_004936569:1,258,678...1,266,925 JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 ISO (MGI:MGI:1861531|PMID:10915771) MGI PMID:10915771 MGI:MGI:1861531 NCBI chrNW_004936594:944,936...950,537 JBrowse link
G Galt galactose-1-phosphate uridylyltransferase ISO (MGI:MGI:2180189|PMID:11286504) MGI PMID:11286504 MGI:MGI:2180189 NCBI chrNW_004936524:2,726,795...2,730,049 JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkl phosphofructokinase, liver type ISO (MGI:MGI:1096000|PMID:9287040), (MGI:MGI:66552|PMID:8172601) MGI PMID:8172601, PMID:9287040 MGI:MGI:1096000, MGI:MGI:66552 NCBI chrNW_004936500:94,016...117,598 JBrowse link
G Pfkm phosphofructokinase, muscle ISO (PMID:25796446)
(MGI:MGI:3759009|PMID:17595219)
(MGI:MGI:3809691|PMID:2521854)
CAFA
MGI
PMID:2521854, PMID:17595219, PMID:25796446 MGI:MGI:3759009, MGI:MGI:3809691 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmps guanine monophosphate synthase ISO (PMID:8089153) RGD
MGI
PMID:3436958, PMID:8089153 RGD:1599004 NCBI chrNW_004936519:3,094,763...3,143,322 JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:19527031) UniProtKB PMID:19527031 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chrNW_004936484:568,056...650,820 JBrowse link
GMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmpr2 guanosine monophosphate reductase 2 ISO (PMID:22037469) UniProtKB PMID:22037469 NCBI chrNW_004936722:323,917...330,648 JBrowse link
G Guk1 guanylate kinase 1 ISO RGD PMID:10913137 RGD:5147867 NCBI chrNW_004936864:76,707...86,479 JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
GTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak4 adenylate kinase 4 ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 ISO (MGI:MGI:5489878|PMID:22212473)
(MGI:MGI:5506958|PMID:23911318)
CACAO PMID:22212473, PMID:23911318 MGI:MGI:5489878, MGI:MGI:5506958 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:5529149|PMID:23078545)
(MGI:MGI:5506958|PMID:23911318)
CACAO PMID:23078545, PMID:23911318 MGI:MGI:5506958, MGI:MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Efl1 elongation factor like GTPase 1 ISO (PMID:21536732) UniProtKB PMID:21536732 NCBI chrNW_004936483:18,550,832...18,685,762 JBrowse link
G Gnai3 G protein subunit alpha i3 ISO (PMID:19478087) UniProtKB PMID:19478087 NCBI chrNW_004936704:1,031,476...1,075,662 JBrowse link
G Gtpbp1 GTP binding protein 1 ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chrNW_004936492:2,627,881...2,648,295 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:21048939) BHF-UCL PMID:21048939 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mfn1 mitofusin 1 ISO (PMID:27920125) UniProtKB PMID:27920125 NCBI chrNW_004936566:3,737,315...3,775,894 JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO (PMID:20185555) UniProtKB PMID:20185555 NCBI chrNW_004936711:1,027,531...1,113,796 JBrowse link
G Rab23 RAB23, member RAS oncogene family ISO (PMID:22365972) UniProtKB PMID:22365972 NCBI chrNW_004936476:4,095,829...4,127,714 JBrowse link
G Ran RAN, member RAS oncogene family ISO (PMID:26272610) UniProtKB PMID:26272610 NCBI chrNW_004936660:1,669,352...1,673,972 JBrowse link
G Rhoa ras homolog family member A ISO PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Rhoq ras homolog family member Q ISO (PMID:10445846) BHF-UCL PMID:10445846 NCBI chrNW_004936508:5,692,482...5,727,608 JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004936529:4,825,277...4,827,011 JBrowse link
G Nudt9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 ISO (PMID:23911318)
(MGI:MGI:5506958|PMID:23911318)
MGI PMID:23911318 MGI:MGI:5506958 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:87193|PMID:9133604)
(MGI:MGI:5506958|PMID:23911318), (MGI:MGI:5512796|PMID:23542464), (MGI:MGI:5529149|PMID:23078545)
MGI PMID:9133604, PMID:23078545, PMID:23542464, PMID:23911318 MGI:MGI:5506958, MGI:MGI:5512796, MGI:MGI:5529149, MGI:MGI:87193 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
IMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:19527031) UniProtKB PMID:19527031 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II ISO RGD PMID:19913594 RGD:2317226 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936641:1,030,465...1,035,967 JBrowse link
G Mvk mevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936769:1,274,595...1,295,186 JBrowse link
G Pmvk phosphomevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936580:4,473,554...4,482,396 JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chrNW_004936485:15,499,688...15,511,992 JBrowse link
ITP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase ISO (PMID:10642506) UniProtKB PMID:10642506 NCBI chrNW_004936538:5,218,097...5,252,579 JBrowse link
L-methylmalonyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcee methylmalonyl-CoA epimerase ISO (PMID:11481338) UniProtKB PMID:11481338 NCBI chrNW_004936483:971,148...990,634 JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936554:4,425,518...4,484,853 JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936499:5,456,985...5,540,115 JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936486:2,952,379...2,992,148 JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936647:3,153,586...3,208,935 JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 ISO (MGI:MGI:2151970|PMID:11481335) BHF-UCL PMID:11481335 MGI:MGI:2151970 NCBI chrNW_004936470:7,916,438...7,926,089 JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO (MGI:MGI:2151970|PMID:11481335)
(PMID:11481335)
BHF-UCL PMID:11481335 MGI:MGI:2151970 NCBI chrNW_004936498:4,514,212...4,544,523 JBrowse link
G Far1 fatty acyl-CoA reductase 1 ISO (PMID:15220348) UniProtKB PMID:15220348 NCBI chrNW_004936528:4,898,920...4,956,417 JBrowse link
G Far2 fatty acyl-CoA reductase 2 ISO (PMID:15220348) UniProtKB PMID:15220348 NCBI chrNW_004936760:1,265,803...1,406,405 JBrowse link
G Them5 thioesterase superfamily member 5 ISO (PMID:22586271) UniProtKB PMID:22586271 NCBI chrNW_004936580:2,036,595...2,044,053 JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta ISO (MGI:MGI:3804564|PMID:18487439) UniProtKB PMID:18487439 MGI:MGI:3804564 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase ISO (PMID:10417274), (PMID:10455107), (PMID:15003260)
(MGI:MGI:5501374|PMID:23746352)
UniProtKB PMID:10417274, PMID:10455107, PMID:15003260, PMID:23746352 MGI:MGI:5501374 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
medium-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 ISO (PMID:9089413) UniProtKB PMID:9089413 NCBI chrNW_004936715:2,357,215...2,446,601 JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpc1 mitochondrial pyruvate carrier 1 ISO (MGI:MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:MGI:5428352 NCBI chrNW_004936489:16,179,321...16,181,991 JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 ISO (MGI:MGI:5428352|PMID:22628558)
(MGI:MGI:5576400|PMID:24910426)
MGI PMID:22628558, PMID:24910426 MGI:MGI:5428352, MGI:MGI:5576400 NCBI chrNW_004936481:18,253,929...18,259,738 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 ISO (MGI:MGI:3817854|PMID:18586888) MGI PMID:18586888 MGI:MGI:3817854 NCBI chrNW_004936844:889,720...906,631 JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936530:1,509,605...1,513,033 JBrowse link
G Atp5me ATP synthase membrane subunit e ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936477:22,416,505...22,417,543 JBrowse link
G Atp5mf ATP synthase membrane subunit f ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936750:1,716,752...1,725,700 JBrowse link
G Atp5mg ATP synthase membrane subunit g ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936594:354,416...359,415 JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO (PMID:15850986) UniProtKB PMID:15850986 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Stoml2 stomatin like 2 ISO (PMID:21746876)
(MGI:MGI:3849358|PMID:19360003), (MGI:MGI:5438519|PMID:23028053)
UniProtKB PMID:19360003, PMID:21746876, PMID:23028053 MGI:MGI:3849358, MGI:MGI:5438519 NCBI chrNW_004936524:3,129,149...3,132,405 JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (PMID:20165904) BHF-UCL PMID:20165904 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:MGI:3759354|PMID:17828264) UniProtKB PMID:17828264 MGI:MGI:3759354 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:23840896) UniProtKB PMID:23840896 NCBI chrNW_004936641:857,483...875,527 JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO (MGI:MGI:4440406|PMID:20176937) MGI PMID:20176937 MGI:MGI:4440406 NCBI chrNW_004936521:6,646,864...6,648,982 JBrowse link
G Fbp1 fructose-bisphosphatase 1 ISO (PMID:25043030)
(PMID:19881551)
CAFA
UniProtKB
PMID:19881551, PMID:25043030 NCBI chrNW_004936626:3,555,835...3,581,651 JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:MGI:4365327 NCBI chrNW_004936745:1,730,743...1,942,071 JBrowse link
G Ier3 immediate early response 3 ISO (MGI:MGI:4437986|PMID:19096392) MGI PMID:19096392 MGI:MGI:4437986 NCBI chrNW_004936837:401,475...402,769 JBrowse link
G Mtch2 mitochondrial carrier 2 ISO (MGI:MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004936821:382,756...538,254 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (PMID:30451898) UniProt PMID:30451898 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Sirt6 sirtuin 6 ISO (MGI:MGI:4881401|PMID:20141841), (MGI:MGI:5619441|PMID:23217706) CACAO PMID:20141841, PMID:23217706 MGI:MGI:4881401, MGI:MGI:5619441 NCBI chrNW_004936588:2,387,162...2,394,066 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (MGI:MGI:5441121|PMID:22891351) MGI PMID:22891351 MGI:MGI:5441121 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO (MGI:MGI:3820439|PMID:18698006) MGI PMID:18698006 MGI:MGI:3820439 NCBI chrNW_004936541:718,577...727,420 JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Eno1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Il4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chrNW_004936647:2,510,457...2,518,576 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004936498:6,626,334...6,636,973 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (MGI:MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:MGI:5306739 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Taz tafazzin ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
G Tmsb4x thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936470:2,668,525...2,670,611 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
G Vcp valosin containing protein ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISO (MGI:MGI:4881347|PMID:21074248) UniProtKB PMID:21074248 MGI:MGI:4881347 NCBI chrNW_004936488:3,241,004...3,280,360 JBrowse link
G Esrrb estrogen related receptor beta ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004936488:5,350,133...5,452,366 JBrowse link
G Gck glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 ISO (MGI:MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:MGI:1927687 NCBI chrNW_004936512:7,762,325...7,770,007 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO (MGI:MGI:3766710|PMID:17408640) MGI PMID:17408640 MGI:MGI:3766710 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Igf1 insulin like growth factor 1 ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Ins insulin ISO (PMID:381941)
(PMID:7688386)
BHF-UCL PMID:381941, PMID:7688386 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Insr insulin receptor ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chrNW_004936619:1,207,058...1,208,010 JBrowse link
G Mlxipl MLX interacting protein like ISO (PMID:19995986)
(MGI:MGI:3041761|PMID:15118080)
BHF-UCL PMID:15118080, PMID:19995986 MGI:MGI:3041761 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (PMID:22898868) CACAO PMID:22898868 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936522:4,872,360...4,939,873 JBrowse link
G Prxl2c peroxiredoxin like 2C ISO (PMID:29901208) UniProt PMID:29901208 NCBI chrNW_004936487:551,072...564,688 JBrowse link
G Psen1 presenilin 1 ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Slc4a4 solute carrier family 4 member 4 ISO (MGI:MGI:5295108|PMID:21976511)
(PMID:21976511)
ARUK-UCL PMID:21976511 MGI:MGI:5295108 NCBI chrNW_004936598:3,391,587...3,713,629 JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5913553|PMID:28327662) UniProtKB PMID:28327662 MGI:MGI:5913553 NCBI chrNW_004936536:1,776,065...2,546,286 JBrowse link
positive regulation of proton-transporting ATP synthase activity, rotational mechanism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase ISO (MGI:MGI:6277238|PMID:30530489)
(PMID:30530489)
UniProt PMID:30530489 MGI:MGI:6277238 NCBI chrNW_004936643:2,339,073...2,354,780 JBrowse link
G Tmsb4x thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936470:2,668,525...2,670,611 JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hint1 histidine triad nucleotide binding protein 1 ISO (PMID:16835243) UniProtKB PMID:16835243 NCBI chrNW_004936647:3,843,544...3,849,428 JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 ISO (MGI:MGI:5487511|PMID:22195962) UniProtKB PMID:22195962 MGI:MGI:5487511 NCBI chrNW_004936509:2,597,593...2,633,780 JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 ISO (MGI:MGI:5428826|PMID:22360721) UniProtKB PMID:22360721 MGI:MGI:5428826 NCBI chrNW_004936490:11,534,412...11,549,128 JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 ISO (PMID:22865452) UniProtKB PMID:22865452 NCBI chrNW_004936624:141,745...213,495 JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 ISO (MGI:MGI:3692363|PMID:16606348)
(PMID:21852536)
UniProtKB PMID:16606348, PMID:21852536 MGI:MGI:3692363 NCBI chrNW_004936585:4,701,012...4,713,421 JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha ISO (MGI:MGI:3629421|PMID:16734431)
(MGI:MGI:3628986|PMID:16636270)
MGI PMID:16636270, PMID:16734431 MGI:MGI:3628986, MGI:MGI:3629421 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Sphk2 sphingosine kinase 2 ISO (MGI:MGI:5641585|PMID:25637806) UniProt PMID:25637806 MGI:MGI:5641585 NCBI chrNW_004936664:2,668,708...2,676,608 JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif6 eukaryotic translation initiation factor 6 ISO (MGI:MGI:5699484|PMID:26383020) UniProtKB PMID:26383020 MGI:MGI:5699484 NCBI chrNW_004936561:5,471,113...5,477,679 JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:29775581) UniProt PMID:29775581 NCBI chrNW_004936492:696,982...778,132 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:MGI:3709696|PMID:17437992) MGI PMID:17437992 MGI:MGI:3709696 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Il3 interleukin 3 ISO (MGI:MGI:3709696|PMID:17437992) MGI PMID:17437992 MGI:MGI:3709696 NCBI chrNW_004936647:3,102,922...3,104,758 JBrowse link
G Jmjd8 jumonji domain containing 8 ISO (PMID:27199445) UniProt PMID:27199445 NCBI chrNW_004936501:327,053...328,789 JBrowse link
G Mlxipl MLX interacting protein like ISO RGD PMID:11724780 RGD:634534 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO (PMID:22923583) UniProtKB PMID:22923583 NCBI chrNW_004936762:99,335...137,833 JBrowse link
G Pgam1 phosphoglycerate mutase 1 ISO (PMID:12189148) UniProtKB PMID:12189148 NCBI chrNW_004936636:2,240,452...2,248,689 JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 ISO (PMID:15877279) BHF-UCL PMID:15877279 NCBI chrNW_004936527:6,907,723...7,168,222 JBrowse link
G Slc2a6 solute carrier family 2 member 6 ISO (PMID:30431159)
(MGI:MGI:6276413|PMID:30431159)
UniProt PMID:30431159 MGI:MGI:6276413 NCBI chrNW_004936669:3,432,206...3,438,849 JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:MGI:5829115|PMID:28069950) MGI PMID:28069950 MGI:MGI:5829115 NCBI chrNW_004936529:264,535...266,451 JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A ISO (PMID:26455326) UniProt PMID:26455326 NCBI chrNW_004936588:2,310,975...2,321,790 JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase ISO (MGI:MGI:6277238|PMID:30530489)
(PMID:30530489)
UniProt PMID:30530489 MGI:MGI:6277238 NCBI chrNW_004936643:2,339,073...2,354,780 JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 ISO (MGI:MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:MGI:6245118 NCBI chrNW_004936543:2,895,771...2,897,761 JBrowse link
regulation of pyruvate kinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jmjd8 jumonji domain containing 8 ISO (PMID:27199445) UniProt PMID:27199445 NCBI chrNW_004936501:327,053...328,789 JBrowse link
succinyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 ISO (PMID:16940157)
(MGI:MGI:3663233|PMID:16940157)
HGNC PMID:16940157 MGI:MGI:3663233 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase ISO (PMID:10806400) UniProt PMID:10806400 NCBI chrNW_004936488:4,038,985...4,061,071 JBrowse link
G Ogdh oxoglutarate dehydrogenase ISO (PMID:24495017), (PMID:29211711) UniProtKB
RGD
PMID:9712727, PMID:24495017, PMID:29211711 RGD:2306877 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Sucla2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chrNW_004936565:1,313,150...1,355,693 JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD PMID:7430155, PMID:17403370 RGD:2306879, RGD:2306915 NCBI chrNW_004936650:3,278,769...3,313,537 JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta ISO RGD PMID:7430155, PMID:17403370 RGD:2306879, RGD:2306915 NCBI chrNW_004936603:243,113...378,526 JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936469:33,632,885...33,805,158 JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936576:2,537,702...2,555,790 JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ISO (PMID:9556635) UniProtKB PMID:9556635 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase ISO (PMID:11730338), (PMID:6893554) UniProtKB
RGD
PMID:6134725, PMID:6893554, PMID:11730338 RGD:5132277 NCBI chrNW_004936725:553,278...564,846 JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004936683:1,432,004...1,454,004 JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:23671276) UniProtKB PMID:23671276 NCBI chrNW_004936809:615,133...634,618 JBrowse link
very long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 ISO (PMID:9482850) UniProtKB PMID:9482850 NCBI chrNW_004936715:2,357,215...2,446,601 JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004936529:4,825,277...4,827,011 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11962
    metabolic process 7653
      organic substance metabolic process 7353
        carbohydrate derivative metabolic process 690
          ribose phosphate metabolic process 249
            ribonucleotide metabolic process 244
              FMN metabolic process + 0
              purine ribonucleotide metabolic process + 237
              pyrimidine ribonucleotide metabolic process + 8
              ribonucleotide biosynthetic process + 111
              ribonucleotide catabolic process + 19
Path 2
Term Annotations click to browse term
  biological_process 11962
    metabolic process 7653
      cellular metabolic process 7051
        heterocycle metabolic process 3685
          nucleobase-containing compound metabolic process 3574
            nucleobase-containing small molecule metabolic process 357
              nucleoside phosphate metabolic process 311
                nucleotide metabolic process 301
                  ribonucleotide metabolic process 244
                    FMN metabolic process + 0
                    purine ribonucleotide metabolic process + 237
                    pyrimidine ribonucleotide metabolic process + 8
                    ribonucleotide biosynthetic process + 111
                    ribonucleotide catabolic process + 19
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.