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ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleotide metabolic process
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Accession:GO:0009259 term browser browse the term
Definition:The chemical reactions and pathways involving a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: ribonucleotide metabolism
 alt_id: GO:0009121


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ribonucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:4078017 RGD:2301990 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
G Rnaseh2b ribonuclease H2 subunit B acts_upstream_of_or_within ISO (MGI:5435090|PMID:22802351) MGI PMID:22802351 MGI:5435090 NCBI chrNW_004936565:3,791,305...3,839,991 JBrowse link
'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6718247|PMID:5891253)
(MGI:6718249|PMID:6480832)
MGI PMID:5891253 PMID:6480832 MGI:6718247 MGI:6718249 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (MGI:59961|PMID:1939273) MGI PMID:1939273 MGI:59961 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (MGI:6717337|PMID:26144885) MGI PMID:26144885 MGI:6717337 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (MGI:64690|PMID:8299947) MGI PMID:8299947 MGI:64690 NCBI chrNW_004936500:8,750,928...8,782,303 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (MGI:6718248|PMID:6327016) MGI PMID:6327016 MGI:6718248 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (MGI:6717337|PMID:26144885) RGD
MGI
PMID:9332377 PMID:26144885 MGI:6717337 RGD:70804 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (MGI:64690|PMID:8299947) MGI PMID:8299947 MGI:64690 NCBI chrNW_004936500:8,750,928...8,782,303 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (MGI:6718248|PMID:6327016) MGI PMID:6327016 MGI:6718248 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (MGI:6720231|PMID:6249586) MGI PMID:6249586 MGI:6720231 NCBI chrNW_004936475:21,863,627...21,877,660 JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (MGI:1289111|PMID:2419341)
(MGI:6720230|PMID:6154574)
MGI PMID:2419341 PMID:6154574 MGI:1289111 MGI:6720230 NCBI chrNW_004936725:553,278...564,846 JBrowse link
'de novo' XMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (MGI:6717337|PMID:26144885) MGI PMID:26144885 MGI:6717337 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (MGI:64690|PMID:8299947) MGI PMID:8299947 MGI:64690 NCBI chrNW_004936500:8,750,928...8,782,303 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chrNW_004936479:15,523,342...15,540,229 JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chrNW_004936529:748,777...753,582 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (MGI:6718248|PMID:6327016) MGI PMID:6327016 MGI:6718248 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747722), (PMID:23207770)
(MGI:2448448|PMID:12414806)
UniProt
MGI
PMID:12414806 PMID:14747722 PMID:23207770 MGI:2448448 NCBI chrNW_004936818:863,969...975,562 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:7830796) BHF-UCL PMID:7830796 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G LOC101970597 sulfotransferase 1C1 involved_in ISO (PMID:17425406) UniProt PMID:17425406 NCBI chrNW_004936729:1,783,124...1,796,723 JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in ISO (PMID:12923182) CAFA PMID:12923182 NCBI chrNW_004936664:2,626,810...2,655,290 JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acly ATP citrate lyase involved_in ISO (PMID:1371749) BHF-UCL PMID:1371749 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(MGI:2151932|PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chrNW_004936620:739,633...800,472 JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:2151932 NCBI chrNW_004936561:5,794,685...5,842,619 JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chrNW_004936778:49,130...123,345 JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:9869665) RGD
UniProt
PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 RGD:1600790 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) UniProt PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936612:2,395,452...2,437,592 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004936844:889,720...906,631 JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936717:2,377,982...2,379,137 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004936473:2,580,642...2,586,266 JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Nudt7 nudix hydrolase 7 acts_upstream_of_or_within
involved_in
ISO (MGI:2137102|PMID:11415433)
(MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520)
MGI
UniProt
PMID:11415433 PMID:18799520 PMID:29378847 MGI:2137102 MGI:6157214 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
acetyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 ISO RGD PMID:16476568 RGD:2317620 NCBI chrNW_004936497:13,242,644...13,269,007 JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in ISO (MGI:4840155|PMID:20952656) UniProt PMID:20952656 MGI:4840155 NCBI chrNW_004936490:927,769...1,191,483 JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in ISO (PMID:20952656) UniProt PMID:20952656 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
G Acly ATP citrate lyase ISO RGD PMID:18062843 RGD:2317315 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acot12 acyl-CoA thioesterase 12 acts_upstream_of_or_within ISO (MGI:2450440|PMID:12545200) MGI PMID:12545200 MGI:2450440 NCBI chrNW_004936469:635,663...681,373 JBrowse link
G Cs citrate synthase ISO RGD PMID:818082 PMID:938457 PMID:5820645 RGD:2306824 RGD:2306825 RGD:2306828 NCBI chrNW_004936646:676,926...704,988 JBrowse link
G Fasn fatty acid synthase ISO RGD PMID:18062843 RGD:2317315 NCBI chrNW_004936594:5,591,785...5,609,886 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO (PMID:23751782) UniProt PMID:23751782 NCBI chrNW_004936627:4,451,847...4,473,163 JBrowse link
acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase short/branched chain acts_upstream_of_or_within ISO PMID:8660691 MGI PMID:8660691 RGD:631739 NCBI chrNW_004936486:11,668,099...11,707,946 JBrowse link
G Acot12 acyl-CoA thioesterase 12 involved_in ISO PMID:11322891 HGNC-UCL PMID:11322891 RGD:633789 NCBI chrNW_004936469:635,663...681,373 JBrowse link
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16940157)
(MGI:3663233|PMID:16940157)
HGNC-UCL PMID:16940157 MGI:3663233 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in
acts_upstream_of_or_within
ISO (PMID:9153233), (PMID:9299485)
(MGI:2156286|PMID:11673457)
PMID:11785945
UniProt
MGI
PMID:9153233 PMID:9299485 PMID:11673457 PMID:11785945 MGI:2156286 RGD:70235 NCBI chrNW_004936514:7,166,392...7,180,537 JBrowse link
G Acot9 acyl-CoA thioesterase 9 involved_in ISO (MGI:1928308|PMID:10383425) HGNC-UCL PMID:10383425 MGI:1928308 NCBI chrNW_004936624:795,272...834,441 JBrowse link
G Baat bile acid-CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727) UniProt PMID:12810727 NCBI chrNW_004936524:9,536,032...9,544,901 JBrowse link
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial acts_upstream_of_or_within ISO (MGI:3619815|PMID:15878874) MGI PMID:15878874 MGI:3619815 NCBI chrNW_004936486:2,754,753...2,823,600 JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) UniProt PMID:18238778 NCBI chrNW_004936785:967,871...1,007,761 JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:2573547 RGD:1599519 NCBI chrNW_004936474:8,955,216...8,971,078 JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:15870076 RGD:1625002 NCBI chrNW_004936530:2,401,053...2,425,989 JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) HGNC-UCL PMID:15668256 NCBI chrNW_004936473:17,298,641...17,302,954 JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 PMID:5123889 RGD:5490208 RGD:5490216 NCBI chrNW_004936503:497,391...517,011 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in ISO (MGI:6478084|PMID:20430891)
(MGI:5917829|PMID:28746349)
MGI PMID:20430891 PMID:28746349 MGI:5917829 MGI:6478084 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (MGI:3778846|PMID:18223655) UniProt PMID:18223655 MGI:3778846 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 MGI:64874 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936470:2,547,038...2,576,951 JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chrNW_004936474:21,535,197...21,542,417 JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chrNW_004936493:12,520,480...12,547,394 JBrowse link
G Nt5e 5'-nucleotidase ecto acts_upstream_of_or_within
involved_in
ISO (MGI:3770326|PMID:16547283)
(MGI:5917829|PMID:28746349)
(MGI:6478084|PMID:20430891)
RGD
MGI
PMID:16547283 PMID:20430891 PMID:21414400 PMID:28746349 MGI:3770326 MGI:5917829 MGI:6478084 RGD:5134346 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675)
(PMID:1619276)
MGI PMID:1619276 PMID:8064675 MGI:6478860 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (MGI:5489878|PMID:22212473) CACAO PMID:22212473 MGI:5489878 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in ISO (MGI:6715203|PMID:819300), (MGI:6715204|PMID:6978152) MGI PMID:819300 PMID:6978152 MGI:6715203 MGI:6715204 NCBI chrNW_004936521:4,560,078...5,023,780 JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (MGI:1312996|PMID:9776749)
(MGI:85816|PMID:8864750)
MGI PMID:8864750 PMID:9776749 MGI:1312996 MGI:85816 NCBI chrNW_004936641:913,674...916,312 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (MGI:1331314|PMID:10037486) MGI PMID:10037486 MGI:1331314 NCBI chrNW_004936691:650,753...694,362 JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) CAFA PMID:17510399 PMID:21106936 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chrNW_004936490:12,549,045...12,551,895 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004936556:226,643...263,517 JBrowse link
G LOC101970352 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (MGI:3775056|PMID:18367675) MGI PMID:18367675 MGI:3775056 NCBI chrNW_004936528:827,322...862,832 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
ATP generation from ADP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) UniProt PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Adcy10 adenylate cyclase 10 involved_in ISO (PMID:12609998), (PMID:15659711) RGD
UniProt
PMID:7225326 PMID:9874775 PMID:12609998 PMID:15659711 PMID:16627466 PMID:16964251 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chrNW_004936481:18,274,158...18,330,136 JBrowse link
G Adcy2 adenylate cyclase 2 involved_in ISO PMID:18164588
PMID:10427002
RGD
BHF-UCL
UniProt
PMID:10427002 PMID:11738086 PMID:12711600 PMID:18164588 RGD:10400857 RGD:2312641 RGD:2312674 RGD:8553431 NCBI chrNW_004936643:47,830...338,891 JBrowse link
G Adcy3 adenylate cyclase 3 involved_in ISO (MGI:1889935|PMID:11055432)
PMID:24363043
RGD
UniProt
PMID:11055432 PMID:12711600 PMID:24363043 MGI:1889935 RGD:10400870 RGD:2312674 NCBI chrNW_004936493:7,250,194...7,333,433 JBrowse link
G Adcy4 adenylate cyclase 4 involved_in ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209 PMID:11738086 PMID:12711600 RGD:2312641 RGD:2312674 RGD:8554340 NCBI chrNW_004936722:213,916...230,802 JBrowse link
G Adcy5 adenylate cyclase 5 involved_in ISO (PMID:15385642), (PMID:24700542)
(PMID:24740569)
RGD
UniProt
PMID:10894801 PMID:11738086 PMID:12711600 PMID:15385642 PMID:24700542 PMID:24740569 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chrNW_004936725:1,751,272...1,897,937 JBrowse link
G Adcy6 adenylate cyclase 6 involved_in ISO (MGI:4457984|PMID:20466003)
(PMID:17916776), (PMID:18403039)
RGD
UniProt
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 PMID:15961389 PMID:17916776 PMID:18403039 PMID:18971210 PMID:20466003 MGI:4457984 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chrNW_004936512:6,612,708...6,629,202 JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO (PMID:11113152), (PMID:17760784) RGD
UniProt
PMID:11113152 PMID:12711600 PMID:17760784 RGD:2312674 NCBI chrNW_004936475:3,368,069...3,393,306 JBrowse link
G Adcy8 adenylate cyclase 8 ISO RGD PMID:16741924 PMID:19305019 PMID:19444869 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chrNW_004936470:17,831,644...18,047,868 JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within
involved_in
ISO (MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814)
(PMID:10987815), (PMID:9628827)
RGD
MGI
UniProt
PMID:7575502 PMID:8662814 PMID:9628827 PMID:10987815 PMID:19444869 MGI:76465 MGI:80863 RGD:2312785 NCBI chrNW_004936694:336,269...449,490 JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D involved_in ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chrNW_004936480:8,123,437...9,235,586 JBrowse link
cAMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (MGI:76872|PMID:7595494) MGI PMID:7595494 MGI:76872 NCBI chrNW_004936469:25,494,820...25,745,783 JBrowse link
G Epha2 EPH receptor A2 involved_in ISO (PMID:27385333) UniProt PMID:27385333 NCBI chrNW_004936474:3,648,395...3,673,856 JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO (PMID:3529090)
PMID:15041191
(PMID:29775581)
CAFA
UniProt
PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Eno2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of ISO (PMID:30700909) UniProt PMID:30700909 NCBI chrNW_004936765:1,126,168...1,255,354 JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of ISO (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052 NCBI chrNW_004936923:109,973...166,952 JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23505436)
(MGI:3640061|PMID:16614755)
UniProt
MGI
PMID:16614755 PMID:23505436 MGI:3640061 NCBI chrNW_004936576:2,353,874...2,411,747 JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISO (PMID:23505436) UniProt PMID:23505436 NCBI chrNW_004936576:2,427,451...2,469,946 JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in ISO (MGI:5049799|PMID:21598940) UniProt PMID:21598940 MGI:5049799 NCBI chrNW_004936595:1,235,747...1,250,294 JBrowse link
G Nppa natriuretic peptide A acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:683,325...684,662 JBrowse link
G Nppc natriuretic peptide C acts_upstream_of ISO (PMID:1672777)
(MGI:2177134|PMID:11259675)
GO_Central PMID:1672777 PMID:11259675 MGI:2177134 NCBI chrNW_004936525:5,092,675...5,099,344 JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936580:3,479,858...3,496,896 JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936524:3,779,398...3,798,074 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chrNW_004936509:10,819,067...11,142,964 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (PMID:19828435)
(MGI:4420377|PMID:19632989)
UniProt PMID:19632989 PMID:19828435 MGI:4420377 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISO (PMID:25799991)
(MGI:1266874|PMID:9624145)
(MGI:5634842|PMID:25799991)
UniProt PMID:9624145 PMID:25799991 MGI:1266874 MGI:5634842 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
cGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:66348|PMID:7518067), (MGI:68066|PMID:3038581) MGI PMID:3038581 PMID:7518067 MGI:66348 MGI:68066 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:4361111|PMID:19474061), (MGI:4834094|PMID:20511540) MGI PMID:19474061 PMID:20511540 MGI:4361111 MGI:4834094 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISO (PMID:9624146) UniProt PMID:9624146 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within ISO (MGI:66348|PMID:7518067) MGI PMID:7518067 MGI:66348 NCBI chrNW_004936471:21,402,056...21,567,908 JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004936537:1,660,461...2,439,305 JBrowse link
G Dpys dihydropyrimidinase involved_in ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004936470:39,564,431...39,637,394 JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA involved_in ISO (MGI:5504568|PMID:22925580) MGI PMID:22925580 MGI:5504568 NCBI chrNW_004936478:8,785,984...8,834,776 JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004936619:668,380...713,720 JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004936469:20,465,767...20,513,084 JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Coasy Coenzyme A synthase involved_in
acts_upstream_of_or_within
ISO (PMID:11923312)
(MGI:2181228|PMID:11980892)
UniProt
MGI
PMID:11923312 PMID:11980892 MGI:2181228 NCBI chrNW_004936490:17,318,873...17,323,080 JBrowse link
G Pank1 pantothenate kinase 1 acts_upstream_of_or_within ISO (MGI:4461354|PMID:20559429), (MGI:5446555|PMID:22815849)
(MGI:3607004|PMID:16040613)
MGI PMID:16040613 PMID:20559429 PMID:22815849 MGI:3607004 MGI:4461354 MGI:5446555 NCBI chrNW_004936601:4,578,132...4,639,305 JBrowse link
G Pank2 pantothenate kinase 2 acts_upstream_of_or_within ISO (MGI:5446555|PMID:22815849) MGI PMID:22815849 MGI:5446555 NCBI chrNW_004936485:14,785,050...14,804,258 JBrowse link
G Pank3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:30927326)
(MGI:3607004|PMID:16040613)
(PMID:20797618)
UniProt
MGI
PMID:16040613 PMID:20797618 PMID:30927326 MGI:3607004 NCBI chrNW_004936622:810,016...836,103 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:11923312)
(PMID:29754768)
UniProt PMID:11923312 PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 acts_upstream_of_or_within
involved_in
ISO (MGI:2137102|PMID:11415433)
(MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520)
MGI
UniProt
PMID:11415433 PMID:18799520 PMID:29378847 MGI:2137102 MGI:6157214 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
coenzyme A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Crot carnitine O-octanoyltransferase involved_in ISO (MGI:5546000|PMID:15492013) UniProt PMID:15492013 MGI:5546000 NCBI chrNW_004936763:1,425,394...1,462,638 JBrowse link
G Mccc2 methylcrotonyl-CoA carboxylase subunit 2 ISO RGD PMID:3995077 RGD:2316862 NCBI chrNW_004936549:4,760,073...4,830,190 JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in ISO (PMID:24870241)
(PMID:16179339)
UniProt PMID:16179339 PMID:24870241 NCBI chrNW_004936474:22,611,037...22,633,208 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004936636:406,389...446,167 JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fitm2 fat storage inducing transmembrane protein 2 involved_in ISO (PMID:32915949) UniProt PMID:32915949 NCBI chrNW_004936530:2,491,924...2,498,579 JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479 JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
G Nudt18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chrNW_004936555:5,929,262...5,932,334 JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B involved_in ISO (PMID:10625657) RGD
BHF-UCL
PMID:8255543 PMID:10625657 RGD:2302804 NCBI chrNW_004936524:9,584,302...9,592,961 JBrowse link
G Eno1 enolase 1 involved_in ISO PMID:7964722 CAFA PMID:7964722 RGD:12792993 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Eno2 enolase 2 ISO RGD PMID:8255543 RGD:2302804 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Eno4 enolase 4 acts_upstream_of_or_within ISO (MGI:5516566|PMID:23446454) MGI PMID:23446454 MGI:5516566 NCBI chrNW_004936486:6,760,400...6,785,098 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO RGD PMID:8255543 PMID:28258188 RGD:13792662 RGD:2302804 NCBI chrNW_004936709:1,243,149...1,247,782 JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic acts_upstream_of_or_within ISO (MGI:3513747|PMID:15546993), (MGI:4421119|PMID:19759366) MGI PMID:15546993 PMID:19759366 MGI:3513747 MGI:4421119 NCBI chrNW_004936570:819,562...830,072 JBrowse link
G Gck glucokinase ISO RGD PMID:4273555 PMID:4353083 RGD:2302790 RGD:2302851 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO (MGI:3526465|PMID:15665293)
(MGI:83399|PMID:8417789)
MGI PMID:8417789 PMID:15665293 MGI:3526465 MGI:83399 NCBI chrNW_004936570:1,582,120...1,608,537 JBrowse link
G Hk1 hexokinase 1 ISO RGD PMID:4353083 PMID:8255543 PMID:15574336 RGD:1358232 RGD:2302804 RGD:2302851 NCBI chrNW_004936521:9,067,062...9,139,112 JBrowse link
G LOC101957109 phosphofructokinase, platelet ISO RGD PMID:2931076 PMID:8255543 RGD:2302736 RGD:2302804 NCBI chrNW_004936484:11,105,814...11,161,238 JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 involved_in ISO (PMID:11069105) UniProt PMID:11069105 NCBI chrNW_004936557:5,559,993...5,584,912 JBrowse link
G Pfkl phosphofructokinase, liver type involved_in ISO (PMID:22923583), (PMID:6227635), (PMID:6444532) RGD
UniProt
PMID:2931076 PMID:4273555 PMID:4353083 PMID:6227635 PMID:6444532 PMID:6458283 PMID:22923583 RGD:2301239 RGD:2302736 RGD:2302790 RGD:2302851 NCBI chrNW_004936500:94,016...117,598 JBrowse link
G Pfkm phosphofructokinase, muscle involved_in ISO (PMID:6444532) RGD
UniProt
PMID:2931076 PMID:6444532 PMID:8593533 RGD:1599363 RGD:2302736 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:22590500) UniProt PMID:22590500 NCBI chrNW_004936636:2,240,452...2,248,689 JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:6262916)
(MGI:3526465|PMID:15665293)
UniProt
MGI
PMID:6262916 PMID:15665293 MGI:3526465 NCBI chrNW_004936478:19,021,928...19,026,110 JBrowse link
G Pgk1 phosphoglycerate kinase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3526465|PMID:15665293)
(PMID:7391028)
RGD
MGI
CAFA
PMID:3091090 PMID:6405813 PMID:7391028 PMID:15665293 MGI:3526465 RGD:2302859 RGD:2302860 NCBI chrNW_004936547:286,267...310,062 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555 PMID:4353083 RGD:2302790 RGD:2302851 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pkm pyruvate kinase M1/2 acts_upstream_of_or_within
involved_in
ISO (MGI:55033|PMID:7262549), (MGI:55100|PMID:7295297)
PMID:1883388
RGD
MGI
CAFA
PMID:1883388 PMID:4273555 PMID:7262549 PMID:7295297 PMID:8255543 MGI:55033 MGI:55100 RGD:12793012 RGD:2302790 RGD:2302804 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within ISO (MGI:3583413|PMID:15857891) MGI PMID:15857891 MGI:3583413 NCBI chrNW_004936569:1,258,678...1,266,925 JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within ISO (MGI:1861531|PMID:10915771) MGI PMID:10915771 MGI:1861531 NCBI chrNW_004936594:944,936...950,537 JBrowse link
G Galt galactose-1-phosphate uridylyltransferase acts_upstream_of_or_within ISO (MGI:2180189|PMID:11286504) MGI PMID:11286504 MGI:2180189 NCBI chrNW_004936524:2,726,795...2,730,049 JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkl phosphofructokinase, liver type acts_upstream_of_or_within ISO (MGI:1096000|PMID:9287040), (MGI:66552|PMID:8172601) MGI PMID:8172601 PMID:9287040 MGI:1096000 MGI:66552 NCBI chrNW_004936500:94,016...117,598 JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
ISO (PMID:25796446)
(MGI:3809691|PMID:2521854)
(MGI:3759009|PMID:17595219)
CAFA
MGI
PMID:2521854 PMID:17595219 PMID:25796446 MGI:3759009 MGI:3809691 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in ISO (MGI:6717337|PMID:26144885) MGI PMID:26144885 MGI:6717337 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in ISO (MGI:64690|PMID:8299947) MGI PMID:8299947 MGI:64690 NCBI chrNW_004936500:8,750,928...8,782,303 JBrowse link
G Gmps guanine monophosphate synthase involved_in
acts_upstream_of_or_within
ISO (MGI:6720226|PMID:240826)
(PMID:8089153)
RGD
MGI
PMID:240826 PMID:3436958 PMID:8089153 MGI:6720226 RGD:1599004 NCBI chrNW_004936519:3,094,763...3,143,322 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 involved_in ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chrNW_004936479:15,523,342...15,540,229 JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (MGI:2675193|PMID:12944494)
(MGI:59458|PMID:1671845)
MGI PMID:1671845 PMID:12944494 MGI:2675193 MGI:59458 NCBI chrNW_004936529:748,777...753,582 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase involved_in ISO (MGI:6718248|PMID:6327016) MGI PMID:6327016 MGI:6718248 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936503:8,191,925...8,279,806 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:19527031) UniProt PMID:19527031 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 NOT|involved_in ISO (PMID:21054786) UniProt PMID:21054786 NCBI chrNW_004936484:568,056...650,820 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:30936145 MGI:6306257 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
GMP catabolic process to guanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
GMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmpr2 guanosine monophosphate reductase 2 involved_in ISO (PMID:22037469) UniProt PMID:22037469 NCBI chrNW_004936722:323,917...330,648 JBrowse link
G Guk1 guanylate kinase 1 ISO RGD PMID:10913137 RGD:5147867 NCBI chrNW_004936864:76,707...86,479 JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:1331314|PMID:10037486) MGI PMID:10037486 MGI:1331314 NCBI chrNW_004936691:650,753...694,362 JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impdh2 inosine monophosphate dehydrogenase 2 involved_in ISO (PMID:7903306) UniProt PMID:7903306 NCBI chrNW_004936529:748,777...753,582 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
GTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (MGI:5489878|PMID:22212473)
(MGI:5506958|PMID:23911318)
CACAO PMID:22212473 PMID:23911318 MGI:5489878 MGI:5506958 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5506958|PMID:23911318)
(MGI:5529149|PMID:23078545)
CACAO PMID:23078545 PMID:23911318 MGI:5506958 MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Efl1 elongation factor like GTPase 1 involved_in ISO (PMID:21536732) UniProt PMID:21536732 NCBI chrNW_004936483:18,550,832...18,685,762 JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004936636:406,389...446,167 JBrowse link
G Gimap7 GTPase, IMAP family member 7 involved_in ISO (PMID:23454188) UniProt PMID:23454188 NCBI chrNW_004936527:6,183,501...6,194,954 JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in ISO (PMID:19478087) UniProt PMID:19478087 NCBI chrNW_004936704:1,031,476...1,075,662 JBrowse link
G Gtpbp1 GTP binding protein 1 involved_in ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chrNW_004936492:2,627,881...2,648,295 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:21048939) BHF-UCL PMID:21048939 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mfn1 mitofusin 1 involved_in ISO (PMID:27920125) UniProt PMID:27920125 NCBI chrNW_004936566:3,737,315...3,775,894 JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase involved_in ISO (PMID:20185555) UniProt PMID:20185555 NCBI chrNW_004936711:1,027,531...1,113,796 JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (PMID:22365972) UniProt PMID:22365972 NCBI chrNW_004936476:4,095,829...4,127,714 JBrowse link
G Ran RAN, member RAS oncogene family involved_in ISO (PMID:26272610) UniProt PMID:26272610 NCBI chrNW_004936660:1,669,352...1,673,972 JBrowse link
G Rhoa ras homolog family member A involved_in ISO PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Rhoq ras homolog family member Q involved_in ISO (PMID:10445846) BHF-UCL PMID:10445846 NCBI chrNW_004936508:5,692,482...5,727,608 JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme involved_in ISO (PMID:20385596) UniProt PMID:20385596 NCBI chrNW_004936529:4,825,277...4,827,011 JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (MGI:5506958|PMID:23911318)
(PMID:23911318)
MGI PMID:23911318 MGI:5506958 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within ISO (MGI:87193|PMID:9133604)
(MGI:5506958|PMID:23911318), (MGI:5512796|PMID:23542464), (MGI:5529149|PMID:23078545)
MGI PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 MGI:5506958 MGI:5512796 MGI:5529149 MGI:87193 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970144 purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chrNW_004936594:430,274...432,027 JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chrNW_004936474:21,535,197...21,542,417 JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:21873433) MGI PMID:21873433 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675)
(PMID:1619276)
MGI PMID:1619276 PMID:8064675 MGI:6478860 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
IMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:19527031) UniProt PMID:19527031 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II ISO RGD PMID:19913594 RGD:2317226 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd1 adenosine monophosphate deaminase 1 involved_in ISO (MGI:6152543|PMID:27896074) MGI PMID:27896074 MGI:6152543 NCBI chrNW_004936627:33,350...57,231 JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (MGI:5489878|PMID:22212473) MGI PMID:22212473 MGI:5489878 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5585332|PMID:24940686) MGI PMID:24940686 MGI:5585332 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Aprt adenine phosphoribosyltransferase involved_in ISO (MGI:1312996|PMID:9776749) MGI PMID:9776749 MGI:1312996 NCBI chrNW_004936641:913,674...916,312 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (MGI:1331314|PMID:10037486)
(MGI:85965|PMID:8878108)
MGI PMID:8878108 PMID:10037486 MGI:1331314 MGI:85965 NCBI chrNW_004936691:650,753...694,362 JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936641:1,030,465...1,035,967 JBrowse link
G Mvk mevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936769:1,274,595...1,295,186 JBrowse link
G Pmvk phosphomevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chrNW_004936580:4,473,554...4,482,396 JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chrNW_004936485:15,499,688...15,511,992 JBrowse link
ITP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO (PMID:10642506) UniProt PMID:10642506 NCBI chrNW_004936538:5,218,097...5,252,579 JBrowse link
L-methylmalonyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcee methylmalonyl-CoA epimerase involved_in ISO (PMID:11481338) UniProt PMID:11481338 NCBI chrNW_004936483:971,148...990,634 JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936554:4,425,518...4,484,853 JBrowse link
G Acsl4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936499:5,456,985...5,540,115 JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936486:2,952,379...2,992,148 JBrowse link
G Acsl6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chrNW_004936647:3,153,586...3,208,935 JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in ISO (MGI:2151970|PMID:11481335) BHF-UCL PMID:11481335 MGI:2151970 NCBI chrNW_004936470:7,916,438...7,926,089 JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in ISO (PMID:11481335)
(MGI:2151970|PMID:11481335)
BHF-UCL PMID:11481335 MGI:2151970 NCBI chrNW_004936498:4,514,212...4,544,523 JBrowse link
G Far1 fatty acyl-CoA reductase 1 involved_in ISO (PMID:15220348) UniProt PMID:15220348 NCBI chrNW_004936528:4,898,920...4,956,417 JBrowse link
G Far2 fatty acyl-CoA reductase 2 involved_in ISO (PMID:15220348) UniProt PMID:15220348 NCBI chrNW_004936760:1,265,803...1,406,405 JBrowse link
G Them5 thioesterase superfamily member 5 involved_in ISO (PMID:22586271) UniProt PMID:22586271 NCBI chrNW_004936580:2,036,595...2,044,053 JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3804564|PMID:18487439) UniProt PMID:18487439 MGI:3804564 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:15003260)
(MGI:5501374|PMID:23746352)
UniProt PMID:10417274 PMID:10455107 PMID:15003260 PMID:23746352 MGI:5501374 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) UniProt PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
medium-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 involved_in ISO (PMID:9089413) UniProt PMID:9089413 NCBI chrNW_004936715:2,357,215...2,446,601 JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpc1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:5428352 NCBI chrNW_004936489:16,179,321...16,181,991 JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558)
(MGI:5576400|PMID:24910426)
MGI PMID:22628558 PMID:24910426 MGI:5428352 MGI:5576400 NCBI chrNW_004936481:18,253,929...18,259,738 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 acts_upstream_of_or_within ISO (MGI:3817854|PMID:18586888) MGI PMID:18586888 MGI:3817854 NCBI chrNW_004936844:889,720...906,631 JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936530:1,509,605...1,513,033 JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936477:22,416,505...22,417,543 JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936750:1,716,752...1,725,700 JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936594:354,416...359,415 JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (PMID:21746876)
(MGI:3849358|PMID:19360003), (MGI:5438519|PMID:23028053)
UniProt PMID:19360003 PMID:21746876 PMID:23028053 MGI:3849358 MGI:5438519 NCBI chrNW_004936524:3,129,149...3,132,405 JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:20165904) BHF-UCL PMID:20165904 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) UniProt PMID:23840896 NCBI chrNW_004936641:857,483...875,527 JBrowse link
G Ddit4 DNA damage inducible transcript 4 acts_upstream_of_or_within ISO (MGI:4440406|PMID:20176937) MGI PMID:20176937 MGI:4440406 NCBI chrNW_004936521:6,646,864...6,648,982 JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO (PMID:19881551)
(PMID:25043030)
UniProt
CAFA
PMID:19881551 PMID:25043030 NCBI chrNW_004936626:3,555,835...3,581,651 JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (MGI:6478067|PMID:32460388) UniProt PMID:32460388 MGI:6478067 NCBI chrNW_004936538:5,684,660...5,694,779 JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:4365327 NCBI chrNW_004936745:1,730,743...1,942,071 JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO (MGI:4437986|PMID:19096392) MGI PMID:19096392 MGI:4437986 NCBI chrNW_004936837:401,475...402,769 JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004936821:382,756...538,254 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO (PMID:30451898) UniProt PMID:30451898 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (MGI:4881401|PMID:20141841), (MGI:5619441|PMID:23217706) CACAO PMID:20141841 PMID:23217706 MGI:4881401 MGI:5619441 NCBI chrNW_004936588:2,387,162...2,394,066 JBrowse link
G Stat3 signal transducer and activator of transcription 3 acts_upstream_of_or_within ISO (MGI:5441121|PMID:22891351) MGI PMID:22891351 MGI:5441121 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:4867601 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) acts_upstream_of_or_within ISO (MGI:3820439|PMID:18698006) MGI PMID:18698006 MGI:3820439 NCBI chrNW_004936541:718,577...727,420 JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G LOC101972576 valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004936498:6,626,334...6,636,973 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:5306739 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936470:2,668,525...2,670,611 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:5906931 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:4881347|PMID:21074248) UniProt PMID:21074248 MGI:4881347 NCBI chrNW_004936488:3,241,004...3,280,360 JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004936488:5,350,133...5,452,366 JBrowse link
G Gck glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:1927687 NCBI chrNW_004936512:7,762,325...7,770,007 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A acts_upstream_of_or_within ISO (MGI:3766710|PMID:17408640) MGI PMID:17408640 MGI:3766710 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Ins insulin involved_in ISO (PMID:381941)
(PMID:7688386)
BHF-UCL PMID:381941 PMID:7688386 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Insr insulin receptor involved_in ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G LOC101959175 amyloid beta precursor protein involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chrNW_004936619:1,207,058...1,208,010 JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (PMID:19995986)
(MGI:3041761|PMID:15118080)
BHF-UCL PMID:15118080 PMID:19995986 MGI:3041761 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in ISO (PMID:22898868) CACAO PMID:22898868 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936522:4,872,360...4,939,873 JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of ISO (PMID:21976511)
(MGI:5295108|PMID:21976511)
ARUK-UCL PMID:21976511 MGI:5295108 NCBI chrNW_004936598:3,391,587...3,713,629 JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in ISO (MGI:5913553|PMID:28327662) UniProt PMID:28327662 MGI:5913553 NCBI chrNW_004936536:1,776,065...2,546,286 JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
propionyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hint1 histidine triad nucleotide binding protein 1 involved_in ISO (PMID:16835243) UniProt PMID:16835243 NCBI chrNW_004936647:3,843,544...3,849,428 JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISO (MGI:5487511|PMID:22195962) UniProt PMID:22195962 MGI:5487511 NCBI chrNW_004936509:2,597,593...2,633,780 JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (MGI:5428826|PMID:22360721) UniProt PMID:22360721 MGI:5428826 NCBI chrNW_004936490:11,534,412...11,549,128 JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) UniProt PMID:22865452 NCBI chrNW_004936624:141,745...213,495 JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO (PMID:21852536)
(MGI:3692363|PMID:16606348)
UniProt PMID:16606348 PMID:21852536 MGI:3692363 NCBI chrNW_004936585:4,701,012...4,713,421 JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO (MGI:3628986|PMID:16636270)
(MGI:3629421|PMID:16734431)
MGI PMID:16636270 PMID:16734431 MGI:3628986 MGI:3629421 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 involved_in ISO (PMID:24767988) UniProt PMID:24767988 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO (MGI:5641585|PMID:25637806) UniProt PMID:25637806 MGI:5641585 NCBI chrNW_004936664:2,668,708...2,676,608 JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl2 ADP ribosylation factor like GTPase 2 involved_in ISO (PMID:30945270) UniProt PMID:30945270 NCBI chrNW_004936599:4,336,190...4,343,007 JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO (MGI:5699484|PMID:26383020) UniProt PMID:26383020 MGI:5699484 NCBI chrNW_004936561:5,471,113...5,477,679 JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:29775581) UniProt PMID:29775581 NCBI chrNW_004936492:696,982...778,132 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
ISO (PMID:32697943)
(MGI:3709696|PMID:17437992)
UniProt
MGI
PMID:17437992 PMID:32697943 MGI:3709696 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (MGI:3709696|PMID:17437992) MGI PMID:17437992 MGI:3709696 NCBI chrNW_004936647:3,102,922...3,104,758 JBrowse link
G Jmjd8 jumonji domain containing 8 involved_in ISO (PMID:27199445) UniProt PMID:27199445 NCBI chrNW_004936501:327,053...328,789 JBrowse link
G Mlxipl MLX interacting protein like ISO RGD PMID:11724780 RGD:634534 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:22923583) UniProt PMID:22923583 NCBI chrNW_004936762:99,335...137,833 JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) UniProt PMID:12189148 NCBI chrNW_004936636:2,240,452...2,248,689 JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in ISO (PMID:15877279) BHF-UCL PMID:15877279 NCBI chrNW_004936527:6,907,723...7,168,222 JBrowse link
G Slc2a6 solute carrier family 2 member 6 involved_in ISO (PMID:30431159)
(MGI:6276413|PMID:30431159)
UniProt PMID:30431159 MGI:6276413 NCBI chrNW_004936669:3,432,206...3,438,849 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5829115|PMID:28069950) MGI PMID:28069950 MGI:5829115 NCBI chrNW_004936529:264,535...266,451 JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in ISO (PMID:26455326) UniProt PMID:26455326 NCBI chrNW_004936588:2,310,975...2,321,790 JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO (PMID:30530489)
(MGI:6277238|PMID:30530489)
UniProt PMID:30530489 MGI:6277238 NCBI chrNW_004936643:2,339,073...2,354,780 JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chrNW_004936543:2,895,771...2,897,761 JBrowse link
succinyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
succinyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16940157)
(MGI:3663233|PMID:16940157)
HGNC-UCL PMID:16940157 MGI:3663233 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in ISO (PMID:10806400) UniProt PMID:10806400 NCBI chrNW_004936488:4,038,985...4,061,071 JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO (PMID:24495017), (PMID:29211711) RGD
UniProt
PMID:9712727 PMID:24495017 PMID:29211711 RGD:2306877 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Sucla2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chrNW_004936565:1,313,150...1,355,693 JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD PMID:7430155 PMID:17403370 RGD:2306879 RGD:2306915 NCBI chrNW_004936650:3,278,769...3,313,537 JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta ISO RGD PMID:7430155 PMID:17403370 RGD:2306879 RGD:2306915 NCBI chrNW_004936603:243,113...378,526 JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936469:33,632,885...33,805,158 JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936576:2,537,702...2,555,790 JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (MGI:6720231|PMID:6249586) MGI PMID:6249586 MGI:6720231 NCBI chrNW_004936475:21,863,627...21,877,660 JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (MGI:1289111|PMID:2419341)
(MGI:6720230|PMID:6154574)
MGI PMID:2419341 PMID:6154574 MGI:1289111 MGI:6720230 NCBI chrNW_004936725:553,278...564,846 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452), (PMID:9556635) UniProt PMID:9556635 PMID:10858452 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase involved_in ISO (PMID:11730338), (PMID:6893554) RGD
UniProt
PMID:6134725 PMID:6893554 PMID:11730338 RGD:5132277 NCBI chrNW_004936725:553,278...564,846 JBrowse link
G Uprt uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004936683:1,432,004...1,454,004 JBrowse link
UMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004936537:1,660,461...2,439,305 JBrowse link
G Dpys dihydropyrimidinase involved_in ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004936470:39,564,431...39,637,394 JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chrNW_004936594:430,274...432,027 JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (MGI:53656|PMID:5472365) MGI PMID:5472365 MGI:53656 NCBI chrNW_004936619:668,380...713,720 JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930), (MGI:73237|PMID:7744869) MGI PMID:7744869 PMID:14715930 MGI:2683856 MGI:73237 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004936469:20,465,767...20,513,084 JBrowse link
UMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase involved_in ISO (MGI:6720232|PMID:6498945) MGI PMID:6498945 MGI:6720232 NCBI chrNW_004936474:6,543,295...6,564,575 JBrowse link
G Uck1 uridine-cytidine kinase 1 involved_in ISO (MGI:84399|PMID:8951040) MGI PMID:8951040 MGI:84399 NCBI chrNW_004936487:18,267,878...18,271,406 JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:3586453|PMID:11956089) MGI PMID:11956089 MGI:3586453 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004936636:406,389...446,167 JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:23671276) UniProt PMID:23671276 NCBI chrNW_004936809:615,133...634,618 JBrowse link
very long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 involved_in ISO (PMID:9482850) UniProt PMID:9482850 NCBI chrNW_004936715:2,357,215...2,446,601 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12166
    metabolic process 7641
      organic substance metabolic process 7366
        carbohydrate derivative metabolic process 709
          ribose phosphate metabolic process 278
            ribonucleotide metabolic process 274
              FMN metabolic process + 0
              purine ribonucleotide metabolic process + 259
              pyrimidine ribonucleotide metabolic process + 19
              ribonucleotide biosynthetic process + 123
              ribonucleotide catabolic process + 38
Path 2
Term Annotations click to browse term
  biological_process 12166
    metabolic process 7641
      cellular metabolic process 7019
        heterocycle metabolic process 3729
          nucleobase-containing compound metabolic process 3625
            nucleobase-containing small molecule metabolic process 370
              nucleoside phosphate metabolic process 333
                nucleotide metabolic process 327
                  ribonucleotide metabolic process 274
                    FMN metabolic process + 0
                    purine ribonucleotide metabolic process + 259
                    pyrimidine ribonucleotide metabolic process + 19
                    ribonucleotide biosynthetic process + 123
                    ribonucleotide catabolic process + 38
paths to the root