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ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleotide metabolic process
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Accession:GO:0009259 term browser browse the term
Definition:The chemical reactions and pathways involving a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Synonyms:exact_synonym: ribonucleotide metabolism
 alt_id: GO:0009121


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ribonucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:4078017 RGD:2301990 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360
JBrowse link
G RNASEH2B ribonuclease H2 subunit B ISO (MGI:MGI:5435090|PMID:22802351) MGI PMID:22802351 MGI:MGI:5435090 NCBI chr13:32,047,830...32,108,573
Ensembl chr13:50,795,701...50,852,909
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 RGD:70804 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 ISO (PMID:14747722), (PMID:23207770)
(MGI:MGI:2448448|PMID:12414806)
CAFA
MGI
PMID:12414806, PMID:14747722, PMID:23207770 MGI:MGI:2448448 NCBI chr 4:100,119,540...100,225,575
Ensembl chr 4:110,692,601...110,798,619
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO (PMID:7830796) BHF-UCL PMID:7830796 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644
JBrowse link
G LOC100979196 sulfotransferase 1A3 ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr17:12,698,447...12,703,949 JBrowse link
G SULT1B1 sulfotransferase family 1B member 1 ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 4:54,478,985...54,513,877
Ensembl chr 4:60,815,445...60,849,516
JBrowse link
G SULT1C4 sulfotransferase family 1C member 4 ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr2A:94,508,492...94,519,963
Ensembl chr2A:109,572,466...109,622,211
JBrowse link
G SULT1E1 sulfotransferase family 1E member 1 ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 4:54,377,681...54,396,619 JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr19:44,864,747...44,880,688
Ensembl chr19:53,517,248...53,532,573
JBrowse link
G SULT2B1 sulfotransferase family 2B member 1 ISO (PMID:12923182) CAFA PMID:12923182 NCBI chr19:45,576,770...45,601,839
Ensembl chr19:54,146,574...54,192,407
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G ACLY ATP citrate lyase ISO (PMID:1371749) BHF-UCL PMID:1371749 NCBI chr17:15,385,335...15,447,269
Ensembl chr17:15,615,994...15,664,800
JBrowse link
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO (PMID:16788062)
(MGI:MGI:2151932|PMID:11150295)
UniProtKB
MGI
PMID:11150295, PMID:16788062 MGI:MGI:2151932 NCBI chr20:24,946,629...25,001,311
Ensembl chr20:25,293,511...25,349,017
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO (MGI:MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:MGI:2151932 NCBI chr20:31,205,104...31,256,263
Ensembl chr20:32,329,721...32,380,526
JBrowse link
G MLYCD malonyl-CoA decarboxylase ISO (PMID:10417274), (PMID:10455107), (PMID:9869665) UniProtKB
RGD
PMID:9869665, PMID:10417274, PMID:10455107, PMID:17316539 RGD:1600790 NCBI chr16:64,520,860...64,537,955
Ensembl chr16:83,912,793...83,929,162
JBrowse link
G PPCS phosphopantothenoylcysteine synthetase ISO (PMID:29754768) UniProt PMID:29754768 NCBI chr 1:41,756,403...41,773,430
Ensembl chr 1:43,136,720...43,140,620
JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLAT dihydrolipoamide S-acetyltransferase ISO RGD PMID:7487891 RGD:1599112 NCBI chr11:106,910,857...106,950,851
Ensembl chr11:110,756,001...110,792,795
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 ISO (PMID:19081061) RGD
UniProtKB
PMID:7487891, PMID:19081061 RGD:1599112 NCBI chr  X:11,967,944...11,985,837
Ensembl chr  X:19,330,508...19,348,443
JBrowse link
G PDHA2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chr 4:88,213,492...88,216,451
Ensembl chr 4:98,883,109...98,884,853
JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta ISO (PMID:19081061) UniProtKB
RGD
PMID:7487891, PMID:19081061 RGD:1599112 NCBI chr 3:58,359,753...58,366,094
Ensembl chr 3:59,776,618...59,782,411
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) UniProt PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
acetyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD PMID:16476568 RGD:2317620 NCBI chr18:43,164,504...43,195,038
Ensembl chr18:46,512,374...46,542,737
JBrowse link
G ACACA acetyl-CoA carboxylase alpha ISO (MGI:MGI:4840155|PMID:20952656) UniProtKB PMID:20952656 MGI:MGI:4840155 NCBI chr17:19,670,114...19,998,903
Ensembl chr17:19,969,205...20,297,651
JBrowse link
G ACACB acetyl-CoA carboxylase beta ISO (PMID:20952656) UniProtKB PMID:20952656 NCBI chr12:106,692,668...106,845,490
Ensembl chr12:110,086,374...110,239,847
JBrowse link
G ACLY ATP citrate lyase ISO RGD PMID:18062843 RGD:2317315 NCBI chr17:15,385,335...15,447,269
Ensembl chr17:15,615,994...15,664,800
JBrowse link
G ACOT12 acyl-CoA thioesterase 12 ISO (MGI:MGI:2450440|PMID:12545200) MGI PMID:12545200 MGI:MGI:2450440 NCBI chr 5:33,885,302...33,950,075
Ensembl chr 5:34,196,504...34,260,254
JBrowse link
G CS citrate synthase ISO RGD PMID:818082, PMID:938457, PMID:5820645 RGD:2306824, RGD:2306825, RGD:2306828 NCBI chr12:32,614,982...32,643,719
Ensembl chr12:32,867,225...32,895,854
JBrowse link
G FASN fatty acid synthase ISO RGD PMID:18062843 RGD:2317315 NCBI chr17:76,483,108...76,503,148
Ensembl chr17:82,187,516...82,205,647
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO (PMID:23751782) UniProt PMID:23751782 NCBI chr 1:82,778,489...82,798,987
Ensembl chr 1:117,775,770...117,796,679
JBrowse link
acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain ISO PMID:8660691 MGI PMID:8660691 RGD:631739 NCBI chr10:119,565,913...119,612,092
Ensembl chr10:123,839,570...123,886,759
JBrowse link
G ACOT12 acyl-CoA thioesterase 12 ISO PMID:11322891 HGNC PMID:11322891 RGD:633789 NCBI chr 5:33,885,302...33,950,075
Ensembl chr 5:34,196,504...34,260,254
JBrowse link
G ACOT2 acyl-CoA thioesterase 2 ISO (PMID:10944470), (PMID:16940157)
hydrolysis
HGNC
RGD
PMID:7744868, PMID:10944470, PMID:16940157 RGD:2315867 NCBI chr14:54,128,445...54,135,067 JBrowse link
G ACOT4 acyl-CoA thioesterase 4 ISO (PMID:16940157)
(MGI:MGI:3663233|PMID:16940157)
HGNC PMID:16940157 MGI:MGI:3663233 NCBI chr14:54,150,843...54,155,119
Ensembl chr14:73,008,909...73,012,561
JBrowse link
G ACOT8 acyl-CoA thioesterase 8 ISO PMID:11785945
(PMID:9153233), (PMID:9299485)
(MGI:MGI:2156286|PMID:11673457)
UniProt
UniProtKB
MGI
PMID:9153233, PMID:9299485, PMID:11673457, PMID:11785945 MGI:MGI:2156286, RGD:70235 NCBI chr20:42,180,734...42,196,466
Ensembl chr20:43,268,264...43,283,989
JBrowse link
G ACOT9 acyl-CoA thioesterase 9 ISO (MGI:MGI:1928308|PMID:10383425) HGNC PMID:10383425 MGI:MGI:1928308 NCBI chr  X:16,300,116...16,365,713
Ensembl chr  X:23,676,669...23,717,092
JBrowse link
G ACSM4 acyl-CoA synthetase medium chain family member 4 ISO RGD PMID:12709059 RGD:1299602 NCBI chr12:7,448,372...7,474,634
Ensembl chr12:7,613,474...7,637,536
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase ISO (PMID:12810727) UniProtKB PMID:12810727 NCBI chr 9:72,568,002...72,593,179
Ensembl chr 9:100,563,040...100,586,189
JBrowse link
G GCDH glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chr19:12,452,779...12,461,757
Ensembl chr19:13,195,241...13,204,223
JBrowse link
G GPAM glycerol-3-phosphate acyltransferase, mitochondrial ISO (MGI:MGI:3619815|PMID:15878874) MGI PMID:15878874 MGI:MGI:3619815 NCBI chr10:108,747,370...108,781,270
Ensembl chr10:112,186,744...112,246,549
JBrowse link
G GPAT4 glycerol-3-phosphate acyltransferase 4 ISO (PMID:18238778) UniProtKB PMID:18238778 NCBI chr 8:40,822,736...40,869,744
Ensembl chr 8:38,271,808...38,318,587
JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:2573547 RGD:1599519 NCBI chr 1:22,993,489...23,017,307
Ensembl chr 1:23,977,723...24,001,150
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:15870076 RGD:1625002 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536
JBrowse link
G OXSM 3-oxoacyl-ACP synthase, mitochondrial ISO (PMID:15668256) HGNC PMID:15668256 NCBI chr 3:25,683,801...25,697,227
Ensembl chr 3:26,021,806...26,026,222
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245
JBrowse link
G AK2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chr 1:32,295,668...32,323,681
Ensembl chr 1:33,480,947...33,508,621
JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:5010295, PMID:5123889 RGD:5490208, RGD:5490216 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chr 4:79,718,294...79,755,238
Ensembl chr 4:90,444,772...90,480,786
JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:5529149|PMID:23078545)
(MGI:MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545, PMID:23439682 MGI:MGI:5476853, MGI:MGI:5529149 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
G BAD BCL2 associated agonist of cell death ISO (MGI:MGI:3778846|PMID:18223655) UniProtKB PMID:18223655 MGI:MGI:3778846 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase ISO (PMID:11428554) RGD
UniProtKB
PMID:3759987, PMID:11428554 RGD:5135303 NCBI chr22:21,249,920...21,271,749
Ensembl chr22:39,068,764...39,389,221
JBrowse link
G ADSS2 adenylosuccinate synthase 2 ISO (MGI:MGI:64874|PMID:8308018)
(PMID:2004783)
MGI
UniProtKB
PMID:2004783, PMID:8308018 MGI:MGI:64874 NCBI chr 1:220,020,480...220,063,658
Ensembl chr 1:225,401,544...225,444,984
JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:96,720,988...96,743,594
Ensembl chr  X:107,094,898...107,117,117
JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:5,403,465...5,436,751
Ensembl chr  X:12,693,286...12,726,355
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto ISO (MGI:MGI:3770326|PMID:16547283) RGD
MGI
PMID:16547283, PMID:21414400 MGI:MGI:3770326, RGD:5134346 NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601
JBrowse link
AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245
JBrowse link
G AK2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chr 1:32,295,668...32,323,681
Ensembl chr 1:33,480,947...33,508,621
JBrowse link
G AK3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
G AK4 adenylate kinase 4 ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 ISO (MGI:MGI:5489878|PMID:22212473) CACAO PMID:22212473 MGI:MGI:5489878 NCBI chr 1:111,997,440...112,009,662
Ensembl chr 1:111,225,522...111,237,778
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:5529149|PMID:23078545)
(MGI:MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545, PMID:23439682 MGI:MGI:5476853, MGI:MGI:5529149 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
G AK9 adenylate kinase 9 ISO (PMID:23416111) UniProtKB PMID:23416111 NCBI chr 6:107,296,088...107,495,623
Ensembl chr 6:111,344,834...111,539,932
JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOA aldolase, fructose-bisphosphate A ISO (PMID:14615364) BHF-UCL PMID:14615364
G ATP5F1A ATP synthase F1 subunit alpha ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr18:39,366,384...39,380,514
Ensembl chr18:42,904,136...42,923,326
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta ISO (PMID:17510399), (PMID:21106936) UniProtKB PMID:17510399, PMID:21106936 NCBI chr12:32,264,570...32,272,419
Ensembl chr12:32,519,749...32,527,753
JBrowse link
G ATP5MC1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chr17:8,641,273...8,644,395
Ensembl chr17:8,828,117...8,831,190
JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chr21:20,270,442...20,282,865 JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr2A:74,000,969...74,032,993
Ensembl chr2A:75,510,768...75,542,563
JBrowse link
G LDHC lactate dehydrogenase C ISO (MGI:MGI:3775056|PMID:18367675) MGI PMID:18367675 MGI:MGI:3775056 NCBI chr11:18,450,117...18,489,321
Ensembl chr11:18,132,829...18,172,055
JBrowse link
G PKLR pyruvate kinase L/R ISO RGD PMID:4273555, PMID:5492954 RGD:2302789, RGD:2302790 NCBI chr 1:130,634,111...130,646,644
Ensembl chr 1:134,239,565...134,251,351
JBrowse link
G PKM pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chr15:51,149,584...51,182,193 JBrowse link
G SLC25A13 solute carrier family 25 member 13 ISO (PMID:12851387) UniProtKB PMID:12851387 NCBI chr 7:88,072,139...88,273,470
Ensembl chr 7:101,658,507...101,859,587
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
ATP generation from ADP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 ISO (PMID:23416111) UniProtKB PMID:23416111 NCBI chr 6:107,296,088...107,495,623
Ensembl chr 6:111,344,834...111,539,932
JBrowse link
benzoyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLYAT glycine-N-acyltransferase ISO (PMID:22475485) UniProtKB PMID:22475485 NCBI chr11:53,963,676...53,985,965
Ensembl chr11:57,423,438...57,438,213
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chr 7:46,289,042...46,436,839
Ensembl chr 7:46,354,640...46,492,549
JBrowse link
G ADCY10 adenylate cyclase 10 ISO (PMID:12609998), (PMID:15659711) RGD
UniProtKB
PMID:7225326, PMID:9874775, PMID:12609998, PMID:15659711, PMID:16627466, PMID:16964251 RGD:1299450, RGD:2313171, RGD:2313173, RGD:2313177 NCBI chr 1:143,239,576...143,404,038
Ensembl chr 1:147,023,671...147,129,705
JBrowse link
G ADCY2 adenylate cyclase 2 ISO PMID:18164588
PMID:10427002
BHF-UCL
RGD
UniProt
PMID:10427002, PMID:11738086, PMID:12711600, PMID:18164588 RGD:10400857, RGD:2312641, RGD:2312674, RGD:8553431 NCBI chr 5:7,718,581...8,154,006
Ensembl chr 5:7,540,790...7,975,853
JBrowse link
G ADCY3 adenylate cyclase 3 ISO PMID:24363043
(MGI:MGI:1889935|PMID:11055432)
UniProt
RGD
UniProtKB
PMID:11055432, PMID:12711600, PMID:24363043 MGI:MGI:1889935, RGD:10400870, RGD:2312674 NCBI chr2A:24,812,729...24,913,539
Ensembl chr2A:24,908,108...25,009,163
JBrowse link
G ADCY4 adenylate cyclase 4 ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209, PMID:11738086, PMID:12711600 RGD:2312641, RGD:2312674, RGD:8554340 NCBI chr14:5,094,899...5,111,603
Ensembl chr14:23,218,178...23,234,861
JBrowse link
G ADCY5 adenylate cyclase 5 ISO (PMID:24740569)
(PMID:15385642), (PMID:24700542)
UniProtKB
RGD
PMID:10894801, PMID:11738086, PMID:12711600, PMID:15385642, PMID:24700542, PMID:24740569 RGD:2312641, RGD:2312674, RGD:2315006 NCBI chr 3:120,380,094...120,545,725
Ensembl chr 3:127,283,921...127,446,508
JBrowse link
G ADCY6 adenylate cyclase 6 ISO (MGI:MGI:4457984|PMID:20466003)
(PMID:17916776), (PMID:18403039)
UniProtKB
RGD
PMID:10866989, PMID:10894801, PMID:11738086, PMID:12711600, PMID:15579502, PMID:15961389, PMID:17916776, PMID:18403039, PMID:18971210, PMID:20466003 MGI:MGI:4457984, RGD:1598749, RGD:2312641, RGD:2312654, RGD:2312674, RGD:2312678, RGD:2313211, RGD:2315006 NCBI chr12:39,957,394...39,981,049
Ensembl chr12:40,836,922...40,859,131
JBrowse link
G ADCY7 adenylate cyclase 7 ISO (PMID:11113152), (PMID:17760784) RGD
UniProtKB
PMID:11113152, PMID:12711600, PMID:17760784 RGD:2312674 NCBI chr16:30,507,836...30,581,068
Ensembl chr16:49,410,143...49,462,278
JBrowse link
G ADCY8 adenylate cyclase 8 ISO RGD PMID:16741924, PMID:19305019, PMID:19444869 RGD:2312769, RGD:2312785, RGD:7241269 NCBI chr 8:127,418,407...127,681,217
Ensembl chr 8:130,398,288...130,661,073
JBrowse link
G ADCY9 adenylate cyclase 9 ISO (PMID:10987815), (PMID:9628827)
(MGI:MGI:76465|PMID:7575502), (MGI:MGI:80863|PMID:8662814)
UniProtKB
MGI
RGD
PMID:7575502, PMID:8662814, PMID:9628827, PMID:10987815, PMID:19444869 MGI:MGI:76465, MGI:MGI:80863, RGD:2312785 NCBI chr16:2,882,687...3,034,275
Ensembl chr16:4,059,736...4,207,430
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4D phosphodiesterase 4D ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chr 5:53,510,287...55,039,181
Ensembl chr 5:55,749,214...56,670,111
JBrowse link
cAMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 ISO (MGI:MGI:76872|PMID:7595494) MGI PMID:7595494 MGI:MGI:76872 NCBI chr2B:39,137,777...39,399,007 JBrowse link
G EPHA2 EPH receptor A2 ISO (PMID:27385333) UniProtKB PMID:27385333 NCBI chr 1:15,259,915...15,292,983
Ensembl chr 1:16,253,513...16,284,787
JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 ISO (PMID:29775581)
(PMID:3529090)
PMID:15041191
UniProt
CAFA
PMID:3529090, PMID:15041191, PMID:29775581 RGD:2302788 NCBI chr 1:7,619,490...7,637,558 JBrowse link
G ENO2 enolase 2 ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr12:7,043,807...7,053,178
Ensembl chr12:6,958,960...6,968,342
JBrowse link
G FOXK1 forkhead box K1 ISO (PMID:30700909) UniProt PMID:30700909 NCBI chr 7:4,934,773...5,017,127
Ensembl chr 7:4,975,444...5,056,174
JBrowse link
G FOXK2 forkhead box K2 ISO (MGI:MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:MGI:6281052 NCBI chr17:76,930,135...77,018,294 JBrowse link
G PFKM phosphofructokinase, muscle ISO (MGI:MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:MGI:4356361 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chr 1:46,642,602...46,673,568 JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 ISO (PMID:23505436)
(MGI:MGI:3640061|PMID:16614755)
UniProtKB
MGI
PMID:16614755, PMID:23505436 MGI:MGI:3640061 NCBI chr 4:148,032,167...148,102,757
Ensembl chr 4:159,850,107...159,913,338
JBrowse link
G GUCY1B1 guanylate cyclase 1 soluble subunit beta 1 ISO (PMID:23505436) UniProtKB PMID:23505436 NCBI chr 4:148,124,643...148,173,315
Ensembl chr 4:159,942,017...159,990,511
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal ISO (MGI:MGI:5049799|PMID:21598940) UniProt PMID:21598940 MGI:MGI:5049799 NCBI chr17:8,037,301...8,051,478
Ensembl chr17:8,023,519...8,036,065
JBrowse link
G NPPA natriuretic peptide A ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chr 1:10,608,025...10,610,287
Ensembl chr 1:11,825,072...11,827,373
JBrowse link
G NPPB natriuretic peptide B ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chr 1:10,621,416...10,622,960
Ensembl chr 1:11,838,518...11,839,995
JBrowse link
G NPPC natriuretic peptide C ISO (PMID:1672777)
(MGI:MGI:2177134|PMID:11259675)
UniProtKB PMID:1672777, PMID:11259675 MGI:MGI:2177134 NCBI chr2B:119,148,774...119,153,381
Ensembl chr2B:237,936,939...237,941,244
JBrowse link
G NPR1 natriuretic peptide receptor 1 ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chr 1:129,034,972...129,050,439
Ensembl chr 1:132,664,948...132,679,327
JBrowse link
G NPR2 natriuretic peptide receptor 2 ISO (PMID:1672777) UniProtKB PMID:1672777 NCBI chr 9:35,642,534...35,660,210
Ensembl chr 9:36,445,576...36,462,637
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr2B:69,407,511...69,798,513
Ensembl chr2B:187,215,046...187,604,948
JBrowse link
G PDE2A phosphodiesterase 2A ISO (PMID:19828435)
(MGI:MGI:4420377|PMID:19632989)
UniProtKB PMID:19632989, PMID:19828435 MGI:MGI:4420377 NCBI chr11:67,653,335...67,753,450
Ensembl chr11:70,875,552...70,975,322
JBrowse link
G PDE5A phosphodiesterase 5A ISO (MGI:MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:MGI:2450821 NCBI chr 4:111,682,772...111,817,234
Ensembl chr 4:122,832,175...122,966,636
JBrowse link
G PDE9A phosphodiesterase 9A ISO (PMID:25799991)
(MGI:MGI:5634842|PMID:25799991)
(MGI:MGI:1266874|PMID:9624145)
UniProtKB PMID:9624145, PMID:25799991 MGI:MGI:1266874, MGI:MGI:5634842 NCBI chr21:28,963,181...29,088,395
Ensembl chr21:42,275,697...42,398,681
JBrowse link
cGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:66348|PMID:7518067), (MGI:MGI:68066|PMID:3038581) MGI PMID:3038581, PMID:7518067 MGI:MGI:66348, MGI:MGI:68066 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006
JBrowse link
G PDE5A phosphodiesterase 5A ISO (MGI:MGI:4361111|PMID:19474061), (MGI:MGI:4834094|PMID:20511540) MGI PMID:19474061, PMID:20511540 MGI:MGI:4361111, MGI:MGI:4834094 NCBI chr 4:111,682,772...111,817,234
Ensembl chr 4:122,832,175...122,966,636
JBrowse link
G PDE9A phosphodiesterase 9A ISO (PMID:9624146) UniProtKB PMID:9624146 NCBI chr21:28,963,181...29,088,395
Ensembl chr21:42,275,697...42,398,681
JBrowse link
G RORA RAR related orphan receptor A ISO (MGI:MGI:66348|PMID:7518067) MGI PMID:7518067 MGI:MGI:66348 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460
JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
G COASY Coenzyme A synthase ISO (MGI:MGI:2181228|PMID:11980892)
(PMID:11923312)
MGI
UniProtKB
PMID:11923312, PMID:11980892 MGI:MGI:2181228 NCBI chr17:14,750,246...14,754,417
Ensembl chr17:14,973,662...14,977,797
JBrowse link
G PANK1 pantothenate kinase 1 ISO (MGI:MGI:3607004|PMID:16040613)
(MGI:MGI:4461354|PMID:20559429), (MGI:MGI:5446555|PMID:22815849)
MGI PMID:16040613, PMID:20559429, PMID:22815849 MGI:MGI:3607004, MGI:MGI:4461354, MGI:MGI:5446555 NCBI chr10:86,302,702...86,428,635
Ensembl chr10:89,847,888...89,912,765
JBrowse link
G PANK2 pantothenate kinase 2 ISO (MGI:MGI:5446555|PMID:22815849) MGI PMID:22815849 MGI:MGI:5446555 NCBI chr20:3,924,054...3,959,393
Ensembl chr20:3,723,211...3,757,748
JBrowse link
G PANK3 pantothenate kinase 3 ISO (MGI:MGI:3607004|PMID:16040613)
(PMID:20797618)
(PMID:30927326)
MGI
UniProtKB
UniProt
PMID:16040613, PMID:20797618, PMID:30927326 MGI:MGI:3607004 NCBI chr 5:163,913,842...163,944,939
Ensembl chr 5:170,685,413...170,709,211
JBrowse link
G PPCDC phosphopantothenoylcysteine decarboxylase ISO (PMID:11923312) UniProtKB PMID:11923312 NCBI chr15:53,963,001...54,001,550
Ensembl chr15:73,579,583...73,606,834
JBrowse link
G PPCS phosphopantothenoylcysteine synthetase ISO (PMID:29754768)
(PMID:11923312)
UniProt
UniProtKB
PMID:11923312, PMID:29754768 NCBI chr 1:41,756,403...41,773,430
Ensembl chr 1:43,136,720...43,140,620
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) MGI PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
coenzyme A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G CROT carnitine O-octanoyltransferase ISO (MGI:MGI:5546000|PMID:15492013) UniProtKB PMID:15492013 MGI:MGI:5546000 NCBI chr 7:79,339,498...79,393,676
Ensembl chr 7:92,989,868...93,043,832
JBrowse link
G MCCC2 methylcrotonoyl-CoA carboxylase 2 ISO RGD PMID:3995077 RGD:2316862 NCBI chr 5:43,650,993...43,724,877
Ensembl chr 5:44,298,650...44,369,106
JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 ISO (PMID:24870241)
(PMID:16179339)
UniProtKB PMID:16179339, PMID:24870241 NCBI chr 1:40,275,581...40,308,421
Ensembl chr 1:41,592,509...41,624,455
JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCDH glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chr19:12,452,779...12,461,757
Ensembl chr19:13,195,241...13,204,223
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chr 1:203,541,866...203,550,827 JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chr 8:21,351,840...21,356,915
Ensembl chr 8:18,293,555...18,297,078
JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKM phosphofructokinase, muscle ISO (MGI:MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:MGI:4356361 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOA aldolase, fructose-bisphosphate A ISO (PMID:14615364) BHF-UCL PMID:14615364
G ALDOB aldolase, fructose-bisphosphate B ISO (PMID:10625657) BHF-UCL
RGD
PMID:8255543, PMID:10625657 RGD:2302804 NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597
JBrowse link
G ENO1 enolase 1 ISO PMID:7964722 CAFA PMID:7964722 RGD:12792993 NCBI chr 1:7,619,490...7,637,558 JBrowse link
G ENO2 enolase 2 ISO RGD PMID:8255543 RGD:2302804 NCBI chr12:7,043,807...7,053,178
Ensembl chr12:6,958,960...6,968,342
JBrowse link
G ENO4 enolase 4 ISO (MGI:MGI:5516566|PMID:23446454) MGI PMID:23446454 MGI:MGI:5516566 NCBI chr10:113,435,222...113,466,275
Ensembl chr10:116,861,395...116,922,607
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO RGD PMID:8255543, PMID:28258188 RGD:13792662, RGD:2302804 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO (MGI:MGI:3513747|PMID:15546993), (MGI:MGI:4421119|PMID:19759366) MGI PMID:15546993, PMID:19759366 MGI:MGI:3513747, MGI:MGI:4421119 NCBI chr19:32,479,559...32,491,959
Ensembl chr19:41,216,758...41,228,750
JBrowse link
G GCK glucokinase ISO RGD PMID:4273555, PMID:4353083 RGD:2302790, RGD:2302851 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751
JBrowse link
G GPI glucose-6-phosphate isomerase ISO (MGI:MGI:3526465|PMID:15665293)
(MGI:MGI:83399|PMID:8417789)
MGI PMID:8417789, PMID:15665293 MGI:MGI:3526465, MGI:MGI:83399 NCBI chr19:31,301,469...31,355,362
Ensembl chr19:40,024,584...40,080,598
JBrowse link
G HK1 hexokinase 1 ISO RGD PMID:4353083, PMID:8255543, PMID:15574336 RGD:1358232, RGD:2302804, RGD:2302851 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045
JBrowse link
G PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 ISO (PMID:11069105) UniProtKB PMID:11069105 NCBI chr 1:182,655,487...182,683,881
Ensembl chr 1:186,934,446...186,961,995
JBrowse link
G PFKL phosphofructokinase, liver type ISO (PMID:22923583), (PMID:6227635), (PMID:6444532) UniProtKB
RGD
PMID:2931076, PMID:4273555, PMID:4353083, PMID:6227635, PMID:6444532, PMID:6458283, PMID:22923583 RGD:2301239, RGD:2302736, RGD:2302790, RGD:2302851 NCBI chr21:30,557,576...30,584,231
Ensembl chr21:43,857,052...43,878,380
JBrowse link
G PFKM phosphofructokinase, muscle ISO (PMID:6444532) RGD
UniProtKB
PMID:2931076, PMID:6444532, PMID:8593533 RGD:1599363, RGD:2302736 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
G PFKP phosphofructokinase, platelet ISO RGD PMID:2931076, PMID:8255543 RGD:2302736, RGD:2302804 NCBI chr10:3,062,844...3,134,955
Ensembl chr10:3,080,242...3,244,790
JBrowse link
G PGAM1 phosphoglycerate mutase 1 ISO (PMID:22590500) UniProtKB PMID:22590500 NCBI chr10:94,048,829...94,056,082
Ensembl chr10:97,542,558...97,549,867
JBrowse link
G PGAM2 phosphoglycerate mutase 2 ISO (MGI:MGI:3526465|PMID:15665293)
(PMID:6262916)
MGI
UniProtKB
PMID:6262916, PMID:15665293 MGI:MGI:3526465 NCBI chr 7:44,776,722...44,780,248
Ensembl chr 7:44,843,067...44,845,984
JBrowse link
G PGAM4 phosphoglycerate mutase family member 4 ISO (PMID:22590500) UniProtKB PMID:22590500 NCBI chr  X:67,148,926...67,150,605 JBrowse link
G PGK1 phosphoglycerate kinase 1 ISO (PMID:7391028)
(MGI:MGI:3526465|PMID:15665293)
CAFA
MGI
RGD
PMID:3091090, PMID:6405813, PMID:7391028, PMID:15665293 MGI:MGI:3526465, RGD:2302859, RGD:2302860 NCBI chr  X:67,280,269...67,302,307 JBrowse link
G PGK2 phosphoglycerate kinase 2 ISO (MGI:MGI:4421119|PMID:19759366) MGI PMID:19759366 MGI:MGI:4421119 NCBI chr 6:49,355,154...49,356,804
Ensembl chr 6:50,616,199...50,617,452
JBrowse link
G PKLR pyruvate kinase L/R ISO RGD PMID:4273555, PMID:4353083 RGD:2302790, RGD:2302851 NCBI chr 1:130,634,111...130,646,644
Ensembl chr 1:134,239,565...134,251,351
JBrowse link
G PKM pyruvate kinase M1/2 ISO (MGI:MGI:55033|PMID:7262549), (MGI:MGI:55100|PMID:7295297)
PMID:1883388
RGD
MGI
CAFA
PMID:1883388, PMID:4273555, PMID:7262549, PMID:7295297, PMID:8255543 MGI:MGI:55033, MGI:MGI:55100, RGD:12793012, RGD:2302790, RGD:2302804 NCBI chr15:51,149,584...51,182,193 JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 ISO (MGI:MGI:3583413|PMID:15857891) MGI PMID:15857891 MGI:MGI:3583413 NCBI chr2B:106,085,299...106,139,298
Ensembl chr2B:224,679,831...224,687,705
JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALK1 galactokinase 1 ISO (MGI:MGI:1861531|PMID:10915771) MGI PMID:10915771 MGI:MGI:1861531 NCBI chr17:69,708,641...69,715,942
Ensembl chr17:75,259,522...75,269,048
JBrowse link
G GALT galactose-1-phosphate uridylyltransferase ISO (MGI:MGI:2180189|PMID:11286504) MGI PMID:11286504 MGI:MGI:2180189 NCBI chr 9:34,483,170...34,487,170 JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFKL phosphofructokinase, liver type ISO (MGI:MGI:1096000|PMID:9287040), (MGI:MGI:66552|PMID:8172601) MGI PMID:8172601, PMID:9287040 MGI:MGI:1096000, MGI:MGI:66552 NCBI chr21:30,557,576...30,584,231
Ensembl chr21:43,857,052...43,878,380
JBrowse link
G PFKM phosphofructokinase, muscle ISO (PMID:25796446)
(MGI:MGI:3759009|PMID:17595219)
(MGI:MGI:3809691|PMID:2521854)
CAFA
MGI
PMID:2521854, PMID:17595219, PMID:25796446 MGI:MGI:3759009, MGI:MGI:3809691 NCBI chr12:40,584,321...40,625,245
Ensembl chr12:41,459,346...41,499,476
JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GMPS guanine monophosphate synthase ISO (PMID:8089153) MGI
RGD
PMID:3436958, PMID:8089153 RGD:1599004 NCBI chr 3:152,925,905...152,999,180
Ensembl chr 3:160,977,222...161,045,214
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPRT1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:19527031) UniProtKB PMID:19527031 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chr10:25,023,015...25,127,770
Ensembl chr10:25,393,227...25,497,054
JBrowse link
GMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GMPR2 guanosine monophosphate reductase 2 ISO (PMID:22037469) UniProtKB PMID:22037469 NCBI chr14:5,008,664...5,015,461
Ensembl chr14:23,132,227...23,139,044
JBrowse link
G GUK1 guanylate kinase 1 ISO RGD PMID:10913137 RGD:5147867 NCBI chr 1:203,541,866...203,550,827 JBrowse link
GTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
G AK4 adenylate kinase 4 ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 ISO (MGI:MGI:5489878|PMID:22212473)
(MGI:MGI:5506958|PMID:23911318)
CACAO PMID:22212473, PMID:23911318 MGI:MGI:5489878, MGI:MGI:5506958 NCBI chr 1:111,997,440...112,009,662
Ensembl chr 1:111,225,522...111,237,778
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:5529149|PMID:23078545)
(MGI:MGI:5506958|PMID:23911318)
CACAO PMID:23078545, PMID:23911318 MGI:MGI:5506958, MGI:MGI:5529149 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
G EFL1 elongation factor like GTPase 1 ISO (PMID:21536732) UniProtKB PMID:21536732 NCBI chr15:61,111,244...61,243,724 JBrowse link
G GIMAP7 GTPase, IMAP family member 7 ISO (PMID:23454188) UniProtKB PMID:23454188 NCBI chr 7:142,122,870...142,130,073
Ensembl chr 7:154,281,647...154,282,549
JBrowse link
G GNAI3 G protein subunit alpha i3 ISO (PMID:19478087) UniProtKB PMID:19478087 NCBI chr 1:111,925,668...111,971,941
Ensembl chr 1:111,154,060...111,198,768
JBrowse link
G GTPBP1 GTP binding protein 1 ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr22:19,621,159...19,648,848
Ensembl chr22:37,438,626...37,462,933
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (PMID:21048939) BHF-UCL PMID:21048939 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MFN1 mitofusin 1 ISO (PMID:27920125) UniProtKB PMID:27920125 NCBI chr 3:176,378,175...176,423,943
Ensembl chr 3:184,552,108...184,596,763
JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO (PMID:20185555) UniProtKB PMID:20185555 NCBI chr 3:190,890,242...190,995,133
Ensembl chr 3:201,207,607...201,312,358
JBrowse link
G RAB23 RAB23, member RAS oncogene family ISO (PMID:22365972) UniProtKB PMID:22365972 NCBI chr 6:56,744,948...56,780,187
Ensembl chr 6:58,375,559...58,411,107
JBrowse link
G RAN RAN, member RAS oncogene family ISO (PMID:26272610) UniProtKB PMID:26272610 NCBI chr12:128,497,407...128,503,049 JBrowse link
G RHOA ras homolog family member A ISO PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr 3:49,282,009...49,339,887 JBrowse link
G RHOQ ras homolog family member Q ISO (PMID:10445846) BHF-UCL PMID:10445846 NCBI chr2A:46,657,884...46,698,604 JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chr 3:128,466,119...128,473,186
Ensembl chr 3:135,788,354...135,790,038
JBrowse link
G NUDT9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chr 4:79,718,294...79,755,238
Ensembl chr 4:90,444,772...90,480,786
JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD2 adenosine monophosphate deaminase 2 ISO (PMID:23911318)
(MGI:MGI:5506958|PMID:23911318)
MGI PMID:23911318 MGI:MGI:5506958 NCBI chr 1:111,997,440...112,009,662
Ensembl chr 1:111,225,522...111,237,778
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 ISO (MGI:MGI:87193|PMID:9133604)
(MGI:MGI:5506958|PMID:23911318), (MGI:MGI:5512796|PMID:23542464), (MGI:MGI:5529149|PMID:23078545)
MGI PMID:9133604, PMID:23078545, PMID:23542464, PMID:23911318 MGI:MGI:5506958, MGI:MGI:5512796, MGI:MGI:5529149, MGI:MGI:87193 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
IMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chr 1:220,020,480...220,063,658
Ensembl chr 1:225,401,544...225,444,984
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:19527031) UniProtKB PMID:19527031 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II ISO RGD PMID:19913594 RGD:2317226 NCBI chr10:99,687,366...99,790,744
Ensembl chr10:103,148,578...103,251,513
JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVD mevalonate diphosphate decarboxylase ISO RGD PMID:197206 RGD:2316852 NCBI chr16:69,365,070...69,376,149
Ensembl chr16:89,025,572...89,036,964
JBrowse link
G MVK mevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chr12:107,150,477...107,173,978
Ensembl chr12:110,544,991...110,568,524
JBrowse link
G PMVK phosphomevalonate kinase ISO RGD PMID:197206 RGD:2316852 NCBI chr 1:130,273,246...130,286,614
Ensembl chr 1:133,882,840...133,894,818
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chr20:3,295,075...3,309,546
Ensembl chr20:3,056,395...3,070,924
JBrowse link
ITP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase ISO (PMID:10642506) UniProtKB PMID:10642506 NCBI chr17:27,717,083...27,820,776
Ensembl chr17:28,225,831...28,240,210
JBrowse link
L-methylmalonyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCEE methylmalonyl-CoA epimerase ISO (PMID:11481338) UniProtKB PMID:11481338 NCBI chr2A:71,154,176...71,176,679 JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL1 acyl-CoA synthetase long chain family member 1 ISO RGD PMID:16466685 RGD:2312800 NCBI chr 4:176,920,811...176,991,495
Ensembl chr 4:189,145,403...189,198,646
JBrowse link
G ACSL4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chr  X:98,731,109...98,841,067
Ensembl chr  X:109,206,964...109,310,914
JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:16466685 RGD:2312800 NCBI chr10:108,965,559...109,019,240
Ensembl chr10:112,407,161...112,457,892
JBrowse link
G ACSL6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:16466685 RGD:2312800 NCBI chr 5:127,373,306...127,434,954 JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGAT1 diacylglycerol O-acyltransferase 1 ISO (MGI:MGI:2151970|PMID:11481335) BHF-UCL PMID:11481335 MGI:MGI:2151970 NCBI chr 8:141,079,948...141,090,619
Ensembl chr 8:144,064,587...144,080,155
JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 ISO (MGI:MGI:2151970|PMID:11481335)
(PMID:11481335)
BHF-UCL PMID:11481335 MGI:MGI:2151970 NCBI chr11:70,824,791...70,857,530
Ensembl chr11:74,126,169...74,158,854
JBrowse link
G FAR1 fatty acyl-CoA reductase 1 ISO (PMID:15220348) UniProtKB PMID:15220348 NCBI chr11:13,774,530...13,838,195
Ensembl chr11:13,468,756...13,531,716
JBrowse link
G FAR2 fatty acyl-CoA reductase 2 ISO (PMID:15220348) UniProtKB PMID:15220348 NCBI chr12:56,975,589...57,165,923
Ensembl chr12:59,599,063...59,676,543
JBrowse link
G THEM5 thioesterase superfamily member 5 ISO (PMID:22586271) UniProtKB PMID:22586271 NCBI chr 1:127,205,721...127,212,112
Ensembl chr 1:130,849,815...130,856,523
JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACB acetyl-CoA carboxylase beta ISO (MGI:MGI:3804564|PMID:18487439) UniProtKB PMID:18487439 MGI:MGI:3804564 NCBI chr12:106,692,668...106,845,490
Ensembl chr12:110,086,374...110,239,847
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase ISO (MGI:MGI:5501374|PMID:23746352)
(PMID:10417274), (PMID:10455107), (PMID:15003260)
UniProtKB PMID:10417274, PMID:10455107, PMID:15003260, PMID:23746352 MGI:MGI:5501374 NCBI chr16:64,520,860...64,537,955
Ensembl chr16:83,912,793...83,929,162
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
medium-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 ISO (PMID:9089413) UniProtKB PMID:9089413 NCBI chr 5:114,842,892...114,928,559
Ensembl chr 5:120,628,605...120,713,860
JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPC1 mitochondrial pyruvate carrier 1 ISO (MGI:MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:MGI:5428352 NCBI chr 6:164,331,604...164,349,747 JBrowse link
G MPC2 mitochondrial pyruvate carrier 2 ISO (MGI:MGI:5428352|PMID:22628558)
(MGI:MGI:5576400|PMID:24910426)
MGI PMID:22628558, PMID:24910426 MGI:MGI:5428352, MGI:MGI:5576400 NCBI chr 1:143,406,611...143,424,508
Ensembl chr 1:147,132,213...147,151,648
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 ISO (MGI:MGI:3817854|PMID:18586888) MGI PMID:18586888 MGI:MGI:3817854 NCBI chr  X:11,967,944...11,985,837
Ensembl chr  X:19,330,508...19,348,443
JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr18:39,366,384...39,380,514
Ensembl chr18:42,904,136...42,923,326
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr12:32,264,570...32,272,419
Ensembl chr12:32,519,749...32,527,753
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr10:7,820,874...7,840,581
Ensembl chr10:7,801,438...7,821,088
JBrowse link
G ATP5F1D ATP synthase F1 subunit delta ISO (PMID:12110673) UniProt PMID:12110673
G ATP5F1E ATP synthase F1 subunit epsilon ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr20:55,379,615...55,383,316
Ensembl chr20:56,740,739...56,744,431
JBrowse link
G ATP5MF ATP synthase membrane subunit f ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 7:91,431,277...91,439,423 JBrowse link
G ATP5MG ATP synthase membrane subunit g ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr11:113,236,010...113,243,661
Ensembl chr11:117,167,404...117,200,030
JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 1:114,110,749...114,122,715 JBrowse link
G ATP5PD ATP synthase peripheral stalk subunit d ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr17:68,986,362...68,994,246
Ensembl chr17:74,541,363...74,549,700
JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr21:12,169,567...12,180,717
Ensembl chr21:25,519,441...25,537,363
JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP ISO (PMID:15850986) UniProtKB PMID:15850986 NCBI chr21:20,270,442...20,282,865 JBrowse link
G STOML2 stomatin like 2 ISO (PMID:21746876)
(MGI:MGI:3849358|PMID:19360003), (MGI:MGI:5438519|PMID:23028053)
UniProtKB PMID:19360003, PMID:21746876, PMID:23028053 MGI:MGI:3849358, MGI:MGI:5438519 NCBI chr 9:34,950,387...34,953,707
Ensembl chr 9:35,755,790...35,759,091
JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:21325440 RGD:9685453 NCBI chr10:92,365,267...92,511,852
Ensembl chr10:95,828,094...95,983,257
JBrowse link
G FLCN folliculin ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 ISO (PMID:20165904) BHF-UCL PMID:20165904 NCBI chr2B:116,265,529...116,517,557 JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 ISO (MGI:MGI:3759354|PMID:17828264) UniProtKB PMID:17828264 MGI:MGI:3759354 NCBI chr11:61,905,722...61,922,227
Ensembl chr11:65,228,713...65,245,429
JBrowse link
G CBFA2T3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:23840896) UniProtKB PMID:23840896 NCBI chr16:69,592,293...69,662,321
Ensembl chr16:89,246,545...89,347,435
JBrowse link
G DDIT4 DNA damage inducible transcript 4 ISO (MGI:MGI:4440406|PMID:20176937) MGI PMID:20176937 MGI:MGI:4440406 NCBI chr10:68,796,712...68,798,840
Ensembl chr10:71,264,029...71,266,149
JBrowse link
G FBP1 fructose-bisphosphatase 1 ISO (PMID:25043030)
(PMID:19881551)
CAFA
UniProtKB
PMID:19881551, PMID:25043030 NCBI chr 9:65,695,082...65,731,628
Ensembl chr 9:93,825,150...93,860,968
JBrowse link
G HDAC4 histone deacetylase 4 ISO (MGI:MGI:4365327|PMID:19109424) BHF-UCL PMID:19109424 MGI:MGI:4365327 NCBI chr2B:126,287,745...126,649,815
Ensembl chr2B:245,123,061...245,427,054
JBrowse link
G IER3 immediate early response 3 ISO (MGI:MGI:4437986|PMID:19096392) MGI PMID:19096392 MGI:MGI:4437986 NCBI chr 6:30,488,162...30,489,784 JBrowse link
G MTCH2 mitochondrial carrier 2 ISO (MGI:MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:MGI:5662300 NCBI chr11:47,566,884...47,596,711
Ensembl chr11:48,115,774...48,146,312
JBrowse link
G MYOG myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (PMID:19955185) BHF-UCL PMID:19955185 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator ISO (PMID:30451898) UniProt PMID:30451898 Ensembl chr16:29,015,155...29,016,987 JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO (PMID:19955185) BHF-UCL PMID:19955185 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G SIRT6 sirtuin 6 ISO (MGI:MGI:4881401|PMID:20141841), (MGI:MGI:5619441|PMID:23217706) CACAO PMID:20141841, PMID:23217706 MGI:MGI:4881401, MGI:MGI:5619441 NCBI chr19:3,196,092...3,204,602
Ensembl chr19:4,146,057...4,154,126
JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO (MGI:MGI:5441121|PMID:22891351) MGI PMID:22891351 MGI:MGI:5441121 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase ISO (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chr12:4,429,945...4,462,142
Ensembl chr12:4,353,272...4,385,380
JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC4A1 solute carrier family 4 member 1 (Diego blood group) ISO (MGI:MGI:3820439|PMID:18698006) MGI PMID:18698006 MGI:MGI:3820439 NCBI chr17:13,131,851...13,150,872
Ensembl chr17:13,302,796...13,317,312
JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G ENO1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 1:7,619,490...7,637,558 JBrowse link
G IL4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chr11:73,128,457...73,140,344
Ensembl chr11:76,720,094...76,763,098
JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 ISO (MGI:MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:MGI:5306739 NCBI chr2B:116,265,529...116,517,557 JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:24747689) AgBase PMID:24747689 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr2B:59,071,123...59,297,327
Ensembl chr2B:176,532,940...176,641,894
JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067
JBrowse link
G TAZ tafazzin ISO RGD PMID:20348225 RGD:13432160 NCBI chr  X:143,853,054...143,863,491
Ensembl chr  X:153,725,294...153,734,046
JBrowse link
G TMSB4X thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr  X:5,587,242...5,589,417 JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
G VCP valosin containing protein ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISO (MGI:MGI:4881347|PMID:21074248) UniProtKB PMID:21074248 MGI:MGI:4881347 NCBI chr14:54,522,428...54,578,501
Ensembl chr14:73,376,684...73,410,468
JBrowse link
G ESRRB estrogen related receptor beta ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895
JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO (MGI:MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:MGI:1927687 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO (MGI:MGI:3766710|PMID:17408640) MGI PMID:17408640 MGI:MGI:3766710 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826
JBrowse link
G IFNG interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IGF1 insulin like growth factor 1 ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chr12:99,986,887...100,066,773 JBrowse link
G INS insulin ISO (PMID:7688386)
(PMID:381941)
BHF-UCL PMID:381941, PMID:7688386 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
G INSR insulin receptor ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009
JBrowse link
G MLXIPL MLX interacting protein like ISO (PMID:19995986)
(MGI:MGI:3041761|PMID:15118080)
BHF-UCL PMID:15118080, PMID:19995986 MGI:MGI:3041761 Ensembl chr 7:80,745,765...80,776,153 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G P2RX7 purinergic receptor P2X 7 ISO (PMID:22898868) CACAO PMID:22898868 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRXL2C peroxiredoxin like 2C ISO (PMID:29901208) UniProt PMID:29901208 NCBI chr 9:67,737,639...67,751,691 JBrowse link
G PSEN1 presenilin 1 ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G SLC4A4 solute carrier family 4 member 4 ISO (MGI:MGI:5295108|PMID:21976511)
(PMID:21976511)
ARUK-UCL PMID:21976511 MGI:MGI:5295108 NCBI chr 4:52,659,221...52,994,053
Ensembl chr 4:59,002,200...59,385,608
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5913553|PMID:28327662) UniProtKB PMID:28327662 MGI:MGI:5913553 NCBI chr 3:111,445,520...112,275,946
Ensembl chr 3:118,389,250...118,431,453
JBrowse link
positive regulation of proton-transporting ATP synthase activity, rotational mechanism term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATPSCKMT ATP synthase c subunit lysine N-methyltransferase ISO (PMID:30530489)
(MGI:MGI:6277238|PMID:30530489)
UniProt PMID:30530489 MGI:MGI:6277238 NCBI chr 5:10,524,829...10,565,898
Ensembl chr 5:10,401,684...10,416,858
JBrowse link
G TMSB4X thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr  X:5,587,242...5,589,417 JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HINT1 histidine triad nucleotide binding protein 1 ISO (PMID:16835243) UniProtKB PMID:16835243 NCBI chr 5:126,587,934...126,594,032
Ensembl chr 5:132,755,766...132,761,823
JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDK1 pyruvate dehydrogenase kinase 1 ISO (MGI:MGI:5487511|PMID:22195962) UniProtKB PMID:22195962 MGI:MGI:5487511 NCBI chr2B:59,841,840...59,958,504
Ensembl chr2B:177,297,840...177,341,113
JBrowse link
G PDK2 pyruvate dehydrogenase kinase 2 ISO (MGI:MGI:5428826|PMID:22360721) UniProtKB PMID:22360721 MGI:MGI:5428826 NCBI chr17:44,185,463...44,202,221
Ensembl chr17:49,060,030...49,076,115
JBrowse link
G PDK3 pyruvate dehydrogenase kinase 3 ISO (PMID:22865452) UniProtKB PMID:22865452 NCBI chr  X:17,062,278...17,147,489
Ensembl chr  X:24,430,028...24,504,730
JBrowse link
G PDK4 pyruvate dehydrogenase kinase 4 ISO (MGI:MGI:3692363|PMID:16606348)
(PMID:21852536)
UniProtKB PMID:16606348, PMID:21852536 MGI:MGI:3692363 NCBI chr 7:87,540,600...87,553,673
Ensembl chr 7:101,128,060...101,141,157
JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNCA synuclein alpha ISO (MGI:MGI:3629421|PMID:16734431)
(MGI:MGI:3628986|PMID:16636270)
MGI PMID:16636270, PMID:16734431 MGI:MGI:3628986, MGI:MGI:3629421 NCBI chr 4:82,018,585...82,132,938
Ensembl chr 4:92,737,608...92,850,600
JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK4 adenylate kinase 4 ISO (PMID:24767988) UniProt PMID:24767988 NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230
JBrowse link
G SPHK2 sphingosine kinase 2 ISO (MGI:MGI:5641585|PMID:25637806) UniProt PMID:25637806 MGI:MGI:5641585 NCBI chr19:45,620,980...45,631,786
Ensembl chr19:54,213,166...54,224,767
JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF6 eukaryotic translation initiation factor 6 ISO (MGI:MGI:5699484|PMID:26383020) UniProtKB PMID:26383020 MGI:MGI:5699484 NCBI chr20:31,608,264...31,614,225
Ensembl chr20:32,731,097...32,737,136
JBrowse link
G EP300 E1A binding protein p300 ISO (PMID:29775581) UniProt PMID:29775581 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO (MGI:MGI:3709696|PMID:17437992) MGI PMID:17437992 MGI:MGI:3709696 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G IL3 interleukin 3 ISO (MGI:MGI:3709696|PMID:17437992) MGI PMID:17437992 MGI:MGI:3709696 NCBI chr 5:127,483,843...127,486,388
Ensembl chr 5:133,647,667...133,650,213
JBrowse link
G JMJD8 jumonji domain containing 8 ISO (PMID:27199445) UniProt PMID:27199445 Ensembl chr16:696,710...698,767 JBrowse link
G MLXIPL MLX interacting protein like ISO RGD PMID:11724780 RGD:634534 Ensembl chr 7:80,745,765...80,776,153 JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO (PMID:22923583) UniProtKB PMID:22923583 NCBI chr  X:60,798,219...60,840,948
Ensembl chr  X:70,852,687...70,894,921
JBrowse link
G PGAM1 phosphoglycerate mutase 1 ISO (PMID:12189148) UniProtKB PMID:12189148 NCBI chr10:94,048,829...94,056,082
Ensembl chr10:97,542,558...97,549,867
JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 ISO (PMID:15877279) BHF-UCL PMID:15877279 NCBI chr 7:143,143,556...143,463,492
Ensembl chr 7:155,293,748...155,610,078
JBrowse link
G SLC2A6 solute carrier family 2 member 6 ISO (PMID:30431159)
(MGI:MGI:6276413|PMID:30431159)
UniProt PMID:30431159 MGI:MGI:6276413 NCBI chr 9:104,589,227...104,602,769
Ensembl chr 9:133,205,995...133,214,051
JBrowse link
G TREX1 three prime repair exonuclease 1 ISO (MGI:MGI:5829115|PMID:28069950) MGI PMID:28069950 MGI:MGI:5829115 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A ISO (PMID:26455326) UniProt PMID:26455326 NCBI chr19:3,066,554...3,090,285 JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATPSCKMT ATP synthase c subunit lysine N-methyltransferase ISO (MGI:MGI:6277238|PMID:30530489)
(PMID:30530489)
UniProt PMID:30530489 MGI:MGI:6277238 NCBI chr 5:10,524,829...10,565,898
Ensembl chr 5:10,401,684...10,416,858
JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 ISO (MGI:MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:MGI:6245118 Ensembl chr 7:80,835,722...80,836,402 JBrowse link
regulation of pyruvate kinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JMJD8 jumonji domain containing 8 ISO (PMID:27199445) UniProt PMID:27199445 Ensembl chr16:696,710...698,767 JBrowse link
succinyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT4 acyl-CoA thioesterase 4 ISO (MGI:MGI:3663233|PMID:16940157)
(PMID:16940157)
HGNC PMID:16940157 MGI:MGI:3663233 NCBI chr14:54,150,843...54,155,119
Ensembl chr14:73,008,909...73,012,561
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase ISO (PMID:10806400) UniProt PMID:10806400 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133
JBrowse link
G OGDH oxoglutarate dehydrogenase ISO (PMID:24495017), (PMID:29211711) UniProtKB
RGD
PMID:9712727, PMID:24495017, PMID:29211711 RGD:2306877 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636
JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chr13:29,095,062...29,189,618
Ensembl chr13:47,797,472...47,856,138
JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD PMID:7430155, PMID:17403370 RGD:2306879, RGD:2306915 NCBI chr2A:84,476,814...84,512,920
Ensembl chr2A:86,035,723...86,066,622
JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta ISO RGD PMID:7430155, PMID:17403370 RGD:2306879, RGD:2306915 NCBI chr 3:67,277,348...67,563,181 JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KYNU kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chr2B:16,792,401...16,947,766
Ensembl chr2B:146,975,995...147,132,634
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chr 4:148,269,097...148,285,533
Ensembl chr 4:160,085,645...160,102,266
JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chr 1:46,642,602...46,673,568 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 ISO (PMID:9556635) UniProtKB PMID:9556635 NCBI chr 8:22,678,746...22,707,408
Ensembl chr 8:19,571,337...19,635,150
JBrowse link
UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UMPS uridine monophosphate synthetase ISO (PMID:11730338), (PMID:6893554) UniProtKB
RGD
PMID:6134725, PMID:6893554, PMID:11730338 RGD:5132277 NCBI chr 3:121,832,758...121,851,707
Ensembl chr 3:128,731,355...128,745,029
JBrowse link
G UPRT uracil phosphoribosyltransferase homolog ISO RGD PMID:1476792 RGD:5132591 NCBI chr  X:64,524,889...64,561,439
Ensembl chr  X:74,639,179...74,675,221
JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804
JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 ISO (PMID:23671276) UniProtKB PMID:23671276 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424
JBrowse link
very long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 ISO (PMID:9482850) UniProtKB PMID:9482850 NCBI chr 5:114,842,892...114,928,559
Ensembl chr 5:120,628,605...120,713,860
JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chr 3:128,466,119...128,473,186
Ensembl chr 3:135,788,354...135,790,038
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12524
    metabolic process 7962
      organic substance metabolic process 7650
        carbohydrate derivative metabolic process 716
          ribose phosphate metabolic process 260
            ribonucleotide metabolic process 255
              FMN metabolic process + 0
              purine ribonucleotide metabolic process + 248
              pyrimidine ribonucleotide metabolic process + 7
              ribonucleotide biosynthetic process + 110
              ribonucleotide catabolic process + 19
Path 2
Term Annotations click to browse term
  biological_process 12524
    metabolic process 7962
      cellular metabolic process 7310
        heterocycle metabolic process 3806
          nucleobase-containing compound metabolic process 3691
            nucleobase-containing small molecule metabolic process 376
              nucleoside phosphate metabolic process 326
                nucleotide metabolic process 316
                  ribonucleotide metabolic process 255
                    FMN metabolic process + 0
                    purine ribonucleotide metabolic process + 248
                    pyrimidine ribonucleotide metabolic process + 7
                    ribonucleotide biosynthetic process + 110
                    ribonucleotide catabolic process + 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.