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ONTOLOGY REPORT - ANNOTATIONS


Term:glucan biosynthetic process
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Accession:GO:0009250 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.
Synonyms:exact_synonym: glucan anabolism;   glucan biosynthesis;   glucan formation;   glucan synthesis



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glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:70,852,223...70,881,979
Ensembl chr 6:70,853,061...70,878,668
JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IEA UniProt
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 6:50,039,661...50,112,543
Ensembl chr 6:50,041,947...50,112,279
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA UniProt
UniProt
GO_REF:0000043 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6161945|PMID:28536304) MGI
Ensembl
PMID:28536304 GO_REF:0000107 MGI:6161945 NCBI chr 1:36,835,775...36,977,653
Ensembl chr 1:36,870,594...36,931,847
JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of
IEA
ISO
(MGI:5543825|PMID:24142699) Ensembl
MGI
PMID:24142699 GO_REF:0000107 MGI:5543825 NCBI chr23:6,880,996...6,888,863
Ensembl chr23:6,886,885...6,888,711
JBrowse link
G GBE1 1,4-alpha-glucan branching enzyme 1 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
InterPro
RGD
PMID:6449198 PMID:21873635 GO_REF:0000002 RGD:1642743 NCBI chr31:5,742,744...6,010,881
Ensembl chr31:5,742,744...6,093,612
JBrowse link
G GCK glucokinase ISO RGD PMID:17028192 RGD:1581879
G GYG1 glycogenin 1 involved_in ISO
IBA
IEA
(PMID:21873635) RGD
GO_Central
Ensembl
PMID:8224611 PMID:10710493 PMID:21873635 GO_REF:0000107 RGD:2303736 RGD:2304070 NCBI chr23:43,831,942...43,864,135
Ensembl chr23:43,826,216...43,864,019
JBrowse link
G GYG2 glycogenin 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr  X:1,476,306...1,512,915
Ensembl chr  X:1,475,951...1,511,534
JBrowse link
G GYS1 glycogen synthase 1 involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(PMID:21873635)
(MGI:3052259|PMID:15282316)
RGD
InterPro
UniProt
UniProt
GO_Central
MGI
Ensembl
PMID:6449198 PMID:7671134 PMID:15282316 PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 MGI:3052259 RGD:1642743 RGD:2303748 NCBI chr 1:107,401,056...107,417,273
Ensembl chr 1:107,401,114...107,417,122
JBrowse link
G GYS2 glycogen synthase 2 involved_in IEA
ISO
IBA
(PMID:21873635) Ensembl
UniProt
InterPro
RGD
GO_Central
UniProt
PMID:114169 PMID:6449198 PMID:15138155 PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582633 RGD:1642743 RGD:2304128 NCBI chr27:25,509,833...25,558,874
Ensembl chr27:25,509,655...25,558,844
JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6161945|PMID:28536304) MGI
Ensembl
PMID:28536304 GO_REF:0000107 MGI:6161945 NCBI chr35:16,920,687...16,921,829
Ensembl chr35:16,920,687...16,921,829
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:565,560...577,754
Ensembl chr 6:565,711...577,739
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:17,418,927...17,428,431
Ensembl chr 6:17,418,926...17,428,359
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353778|PMID:10683377) MGI
UniProt
Ensembl
UniProt
PMID:10683377 GO_REF:0000104 GO_REF:0000107 MGI:1353778 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G acts_upstream_of ISO (MGI:5000151|PMID:21471512) MGI PMID:21471512 MGI:5000151
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583413|PMID:15857891) MGI
Ensembl
PMID:15857891 GO_REF:0000107 MGI:3583413 NCBI chr37:25,405,794...25,414,745
Ensembl chr37:25,406,190...25,414,961
JBrowse link
G PTGES3 prostaglandin E synthase 3 acts_upstream_of_or_within ISO (MGI:3714109|PMID:17438133) MGI PMID:17438133 MGI:3714109 NCBI chr10:885,744...903,814
Ensembl chr10:870,392...909,161
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA UniProt
Ensembl
UniProt
GO_REF:0000041 GO_REF:0000107 NCBI chr10:63,532,366...63,598,362
Ensembl chr10:63,533,171...63,597,452
JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007
JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr18:1,890,689...2,014,836
Ensembl chr18:1,890,792...2,014,839
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363
JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046
JBrowse link
G MIR15B microRNA mir-15b acts_upstream_of ISO (PMID:26179126) ARUK-UCL PMID:26179126 NCBI chr34:26,460,663...26,460,722
Ensembl chr34:26,460,645...26,460,741
JBrowse link
G MIR195 microRNA mir-195 acts_upstream_of ISO (PMID:25240198) ARUK-UCL PMID:25240198 NCBI chr 5:32,045,450...32,045,510
Ensembl chr 5:32,045,450...32,045,510
JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr25:51,145,094...51,181,040
Ensembl chr25:51,144,912...51,177,818
JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:113,359,038...113,407,119
Ensembl chr 1:113,359,575...113,407,131
JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055459|PMID:15231994) MGI
Ensembl
PMID:15231994 GO_REF:0000107 MGI:3055459 NCBI chr 4:50,352,245...50,372,412
Ensembl chr 4:50,367,910...50,372,597
JBrowse link
G CD36 CD36 molecule ISO RGD PMID:14640889 RGD:1600636 NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639
JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:9,982,245...9,994,327
Ensembl chr10:9,980,080...9,991,934
JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:5543825|PMID:24142699)
(PMID:21873635)
MGI
GO_Central
Ensembl
PMID:21873635 PMID:24142699 GO_REF:0000107 MGI:5543825 NCBI chr23:6,880,996...6,888,863
Ensembl chr23:6,886,885...6,888,711
JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO (MGI:5905261|PMID:24481529) BHF-UCL PMID:24481529 MGI:5905261 RGD:12910990 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332
JBrowse link
G GCK glucokinase involved_in IEA Ensembl GO_REF:0000107
G IGF1 insulin like growth factor 1 involved_in ISS
IEA
UniProt
Ensembl
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (MGI:4438697|PMID:20032056) BHF-UCL PMID:20032056 MGI:4438697 NCBI chr18:46,294,036...46,311,982
Ensembl chr18:46,294,019...46,311,982
JBrowse link
G INS insulin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122
JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:39,624,554...39,687,991 JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,197,016...58,229,026
Ensembl chr22:58,223,387...58,227,535
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G acts_upstream_of_or_within ISO (MGI:5000151|PMID:21471512) MGI PMID:21471512 MGI:5000151
G PTH parathyroid hormone involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr21:36,417,062...36,419,967
Ensembl chr21:36,417,058...36,419,967
JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (MGI:3690172|PMID:11001060) BHF-UCL PMID:11001060 MGI:3690172 NCBI chr28:8,834,530...9,063,739
Ensembl chr28:8,837,338...9,063,777
JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999
JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:53,169,836...53,216,817
Ensembl chr14:53,170,954...53,217,169
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:7720853 PMID:11716774 PMID:21873635 RGD:2304267 RGD:2306167 NCBI chr16:35,372,928...35,384,640
Ensembl chr16:35,372,859...35,381,921
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11716774 PMID:21873635 RGD:2306167 NCBI chr28:6,167,532...6,172,057
Ensembl chr28:6,168,917...6,172,004
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11716774 PMID:21873635 RGD:2306167 NCBI chr24:44,550,028...44,551,556
Ensembl chr24:44,550,320...44,551,219
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:15752363 PMID:21873635 RGD:2306166 NCBI chr 8:3,559,296...3,564,849
Ensembl chr 8:3,563,457...3,564,524
JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(PMID:21668450)
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:21668450 PMID:21873635 GO_REF:0000107 NCBI chr  X:42,362,335...42,378,480
Ensembl chr  X:42,362,370...42,378,012
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17437
    metabolic process 11382
      primary metabolic process 10136
        carbohydrate metabolic process 598
          polysaccharide metabolic process 104
            polysaccharide biosynthetic process 70
              glucan biosynthetic process 49
                alpha-glucan biosynthetic process + 0
                beta-glucan biosynthetic process + 0
                glycogen biosynthetic process + 49
                osmoregulated periplasmic glucan biosynthetic process 0
                pullulan biosynthetic process 0
                regulation of glucan biosynthetic process + 33
                starch biosynthetic process + 0
                xyloglucan biosynthetic process 0
paths to the root