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ONTOLOGY REPORT - ANNOTATIONS


Term:glycolipid biosynthetic process
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Accession:GO:0009247 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).
Synonyms:exact_synonym: glycolipid anabolism;   glycolipid biosynthesis;   glycolipid formation;   glycolipid synthesis
 xref: MetaCyc:PWY-401


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glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st2 galactose-3-O-sulfotransferase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:100,982,996...100,994,226
Ensembl chr 9:100,990,523...100,993,206
JBrowse link
G Gal3st3 galactose-3-O-sulfotransferase 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:220,668,544...220,678,300
Ensembl chr 1:220,668,544...220,678,299
JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,583,110...19,592,444
Ensembl chr12:19,583,110...19,592,000
JBrowse link
G Sccpdh saccharopine dehydrogenase (putative) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:97,941,720...97,963,474
Ensembl chr13:97,941,757...97,963,824
Ensembl chr13:97,941,757...97,963,824
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:9266697) RGD PMID:9266697 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO
IBA
(PMID:8288606)
PMID:21873635
RGD PMID:8288606, PMID:21873635 RGD:13792537 NCBI chr 8:36,264,741...36,314,811
Ensembl chr 8:36,264,750...36,314,811
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,394,367...117,397,950
Ensembl chr 7:117,394,372...117,397,956
JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:257,911,099...257,997,735
Ensembl chr 2:257,911,126...257,997,733
JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S involved_in ISO
IBA
(MGI:3688056|PMID:11483512)
PMID:21873635
RGD PMID:11483512, PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr10:65,591,638...65,606,175
Ensembl chr10:65,591,622...65,606,202
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis, class T involved_in IBA
ISO
PMID:21873635
(MGI:3688056|PMID:11483512)
RGD PMID:11483512, PMID:21873635 MGI:3688056, RGD:13792537 NCBI chr 3:160,945,556...160,954,738
Ensembl chr 3:160,945,359...160,954,739
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:12802054)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:12802054, PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:13792537 NCBI chr 3:150,803,096...150,885,597
Ensembl chr 3:150,803,097...150,885,616
JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 Beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr 3:53,699,409...54,269,612
Ensembl chr 3:54,253,949...54,267,292
JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr13:60,435,946...60,444,957
Ensembl chr13:60,435,946...60,444,957
JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in IBA
ISO
PMID:21873635
(PMID:9405390)
RGD PMID:9405390, PMID:21873635 RGD:13792537 NCBI chr13:89,643,847...89,649,880
Ensembl chr13:89,643,881...89,649,906
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
IMP
IEA
GO_REF:0000024
(MGI:3696647|PMID:15658937), (MGI:3826747|PMID:18815260)
PMID:17901466
GO_REF:0000041
UniProt
RGD
PMID:15658937 PMID:18815260, PMID:17901466 GO_REF:0000024 GO_REF:0000041 MGI:3696647 MGI:3826747, RGD:13825191 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1355015|PMID:10727929)
RGD PMID:10727929, PMID:21873635 MGI:1355015, RGD:13792537 NCBI chr14:84,231,473...84,247,371
Ensembl chr14:84,231,639...84,247,369
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IDA
IEA
PMID:8713090
GO_REF:0000041
UniProt PMID:8713090 GO_REF:0000041, RGD:39458006 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013843.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:259,149,018...259,150,479 JBrowse link
G B3galt4 Beta-1,3-galactosyltransferase 4 involved_in ISO
IEA
(PMID:9582303)
GO_REF:0000107
RGD
Ensembl
PMID:9582303 GO_REF:0000107 NCBI chr20:5,446,104...5,447,679
Ensembl chr20:5,446,104...5,447,673
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IDA
ISS
PMID:21873635
(MGI:83232|PMID:8855236)
MGI:2158349|MGI:96074 (MGI:1331265|PMID:10021458)
PMID:3140234
(PMID:1601877), (PMID:7487055), (PMID:7890749)
GO_REF:0000024
RGD
UniProt
PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458, PMID:21873635, PMID:3140234 GO_REF:0000024 MGI:1331265 MGI:83232, RGD:13792537, RGD:21201261 NCBI chr 7:70,439,273...70,459,556
Ensembl chr 7:70,452,579...70,459,880
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,607,103...11,619,595
Ensembl chr 3:11,607,225...11,619,593
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:258,025,177...259,150,709
Ensembl chr 2:258,025,177...258,052,835
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1354410|PMID:10702226)
RGD PMID:10702226, PMID:21873635 MGI:1354410, RGD:13792537 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr18:59,748,766...59,755,257
Ensembl chr18:59,748,444...59,755,226
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 9:103,117,705...103,207,154
Ensembl chr 9:103,117,506...103,207,190
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:6196231 NCBI chr 3:164,039,731...164,055,561
Ensembl chr 3:164,039,731...164,095,878
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6196231|PMID:30114188)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:30114188 GO_REF:0000024 GO_REF:0000107 MGI:6196231 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO (PMID:8027041)
(MGI:65558|PMID:8144500)
RGD PMID:8027041 PMID:8144500 MGI:65558 NCBI chr 7:107,895,045...107,963,158
Ensembl chr 7:107,895,045...107,963,142
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA
IEA
ISO
PMID:8144500
GO_REF:0000107
(MGI:6467685|PMID:22735313), (MGI:65558|PMID:8144500)
(PMID:8920913)
Ensembl
RGD
PMID:8144500 PMID:8920913 PMID:22735313, PMID:8144500 GO_REF:0000107 MGI:6467685 MGI:65558, RGD:68307 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:6467685|PMID:22735313)
Ensembl
RGD
PMID:22735313 GO_REF:0000107 MGI:6467685 NCBI chr 5:136,765,309...136,965,642
Ensembl chr 5:136,766,208...136,965,191
JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase (P blood group) acts_upstream_of_or_within ISO MGI:3624807|MGI:5445373 (MGI:3623723|PMID:16476743), (MGI:5445364|PMID:22875802) RGD PMID:16476743 PMID:22875802 MGI:3623723 MGI:5445364 NCBI chr 7:124,085,832...124,110,440
Ensembl chr 7:124,085,834...124,089,385
JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO
IEA
ISS
(PMID:12716912)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12716912 GO_REF:0000024 GO_REF:0000107 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISS
ISO
GO_REF:0000024
(MGI:5285470|PMID:21628453)
UniProt
RGD
PMID:21628453 GO_REF:0000024 MGI:5285470 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in IBA
ISO
ISS
PMID:21873635
(MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)
GO_REF:0000024
(PMID:8643456)
RGD
UniProt
PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427, PMID:21873635 GO_REF:0000024 MGI:2180222 MGI:3603060 MGI:5448789 MGI:5510915, RGD:13792537 NCBI chr 5:76,376,722...76,419,564
Ensembl chr 5:76,386,836...76,419,560
JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in
IDA
ISO
PMID:10854427
MGI:1347344|MGI:3512453 (MGI:5445364|PMID:22875802)
PMID:12626403
RGD PMID:22875802, PMID:10854427, PMID:10854427, PMID:12626403 MGI:5445364, RGD:1299594, RGD:1299594, RGD:632674 NCBI chr 5:146,933,592...146,945,882
Ensembl chr 5:146,933,592...146,945,880
JBrowse link
G A4galt alpha 1,4-galactosyltransferase (P blood group) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:124,085,832...124,110,440
Ensembl chr 7:124,085,834...124,089,385
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 7:70,439,273...70,459,556
Ensembl chr 7:70,452,579...70,459,880
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9593693, PMID:21873635 RGD:70807, RGD:13792537 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (MGI:1346847|PMID:10521438) RGD PMID:10521438 MGI:1346847 NCBI chr 2:258,025,177...259,150,709
Ensembl chr 2:258,025,177...258,052,835
JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr18:73,564,010...73,630,256
Ensembl chr18:73,564,247...73,625,137
JBrowse link
G Ugt8 UDP glycosyltransferase 8 TAS RGD PMID:7521399 RGD:70050 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cwh43 cell wall biogenesis 43 C-terminal homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:37,315,479...37,361,728
Ensembl chr14:37,315,406...37,361,798
JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:9535917), (PMID:9724629)
(PMID:10835346), (PMID:9535917)
(MGI:1329093|PMID:9535917)
RGD PMID:9535917 PMID:9724629 PMID:10835346, PMID:21873635 MGI:1329093, RGD:13792537 NCBI chr 3:164,966,637...164,986,180
Ensembl chr 3:164,966,637...164,986,180
JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory acts_upstream_of_or_within
involved_in
TAS
IDA
IBA
IEA
ISO
PMID:9724629
PMID:21873635
GO_REF:0000107
(PMID:10835346), (PMID:16162815)
Ensembl
RGD
PMID:10835346 PMID:16162815, PMID:9724629, PMID:9724629, PMID:21873635 GO_REF:0000107, RGD:69827, RGD:69827, RGD:13792537 NCBI chr 3:11,587,941...11,590,528
Ensembl chr 3:11,587,941...11,590,528
JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in IBA
ISO
PMID:21873635
(PMID:10835346)
RGD PMID:10835346, PMID:21873635 RGD:13792537 NCBI chr 2:188,583,664...188,584,179
Ensembl chr 2:188,583,664...188,584,179
JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 TAS RGD PMID:10702226 RGD:1331364 NCBI chr 7:117,394,367...117,397,950
Ensembl chr 7:117,394,372...117,397,956
JBrowse link
G Mppe1 metallophosphoesterase 1 involved_in ISO
ISS
(PMID:29374258)
GO_REF:0000024
RGD
UniProt
PMID:29374258 GO_REF:0000024 NCBI chr18:62,946,952...62,966,174
Ensembl chr18:62,946,953...62,965,538
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IMP RGD PMID:14734546 RGD:1303970 NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963
JBrowse link
G Pgap2 post-GPI attachment to proteins 2 involved_in IEA
IMP
ISO
IBA
GO_REF:0000107
PMID:16407401
(PMID:29374258)
PMID:21873635
Ensembl
RGD
PMID:29374258, PMID:16407401, PMID:21873635 GO_REF:0000107, RGD:8553507, RGD:13792537 NCBI chr 1:167,309,021...167,335,550
Ensembl chr 1:167,309,051...167,334,741
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 involved_in ISO
IBA
(PMID:29374258)
PMID:21873635
RGD PMID:29374258, PMID:21873635 RGD:13792537 NCBI chr10:86,343,058...86,356,146
Ensembl chr10:86,343,064...86,355,006
JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:29374258)
PMID:21873635
UniProt
RGD
PMID:29374258, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:64,848,657...64,867,925
Ensembl chr 5:64,848,658...64,850,427
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000041
MGI:3652879 (MGI:80283|PMID:8611683)
PMID:21873635
UniProt
RGD
PMID:8611683, PMID:21873635 GO_REF:0000041 MGI:80283, RGD:13792537 NCBI chr  X:31,786,823...31,799,751
Ensembl chr  X:31,786,194...31,799,560
JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B involved_in IBA
ISO
PMID:21873635
(PMID:8861954)
RGD PMID:8861954, PMID:21873635 RGD:13792537 NCBI chr 8:79,691,407...79,715,284
Ensembl chr 8:79,691,407...79,715,284
JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C involved_in ISO
IEA
ISS
(PMID:16162815), (PMID:27694521)
GO_REF:0000041
GO_REF:0000024
RGD
UniProt
PMID:16162815 PMID:27694521 GO_REF:0000024 GO_REF:0000041 NCBI chr13:79,886,832...79,889,305
Ensembl chr13:79,886,832...79,889,304
JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F involved_in IBA
ISO
IEA
PMID:21873635
(MGI:1860649|PMID:10781593)
GO_REF:0000041
RGD
UniProt
PMID:10781593, PMID:21873635 GO_REF:0000041 MGI:1860649, RGD:13792537 NCBI chr 6:10,565,841...10,593,972
Ensembl chr 6:10,568,614...10,592,454
JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(PMID:15632136)
GO_REF:0000041
RGD
UniProt
PMID:15632136, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr14:1,567,713...1,596,004
Ensembl chr14:2,410,342...2,438,592
Ensembl chr14:2,410,342...2,438,592
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H involved_in ISO
IEA
IBA
(PMID:16162815)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:16162815, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:102,258,621...102,272,826
Ensembl chr 6:102,263,337...102,272,777
JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L involved_in IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:9188481, PMID:21873635 GO_REF:0000041, RGD:729509, RGD:13792537 NCBI chr10:48,774,018...48,831,848
Ensembl chr10:48,773,828...48,831,855
JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:11226175, PMID:21873635 GO_REF:0000041, RGD:70624, RGD:13792537 NCBI chr13:90,759,260...90,762,957
Ensembl chr13:90,759,260...90,762,957
JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr13:25,510,593...25,662,943
Ensembl chr13:25,513,892...25,652,473
JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O involved_in IEA
ISO
IBA
GO_REF:0000041
(MGI:1860649|PMID:10781593)
PMID:21873635
UniProt
RGD
PMID:10781593, PMID:21873635 GO_REF:0000041 MGI:1860649, RGD:13792537 NCBI chr 5:58,461,055...58,470,699
Ensembl chr 5:58,461,759...58,469,399
JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:16162815), (PMID:28334793)
(MGI:3804747|PMID:10944123)
GO_REF:0000041
RGD
UniProt
PMID:10944123 PMID:16162815 PMID:28334793 GO_REF:0000041 MGI:3804747 NCBI chr11:34,592,128...34,598,253
Ensembl chr11:34,592,121...34,598,275
JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q involved_in
acts_upstream_of_or_within
ISO (PMID:16162815)
PomBase:SPBC30D10.11|SGD:S000003448 (MGI:1307040|PMID:9729469), (MGI:1339481|PMID:10373468)
RGD PMID:9729469 PMID:10373468 PMID:16162815 MGI:1307040 MGI:1339481 NCBI chr10:15,289,530...15,305,593
Ensembl chr10:15,289,536...15,305,549
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U involved_in ISO (PMID:15034568) RGD PMID:15034568 NCBI chr 3:150,803,096...150,885,597
Ensembl chr 3:150,803,097...150,885,616
JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V involved_in ISO
IBA
IEA
UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:15623507 PMID:15720390, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:151,886,132...151,899,024
Ensembl chr 5:151,886,035...151,898,022
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr10:72,194,774...72,198,415
Ensembl chr10:72,194,929...72,196,437
JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:71,938,388...71,954,225
Ensembl chr11:71,938,388...71,954,224
JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:16162815)
RGD PMID:16162815, PMID:21873635 RGD:13792537 NCBI chr 8:23,167,974...23,170,215
Ensembl chr 8:23,167,974...23,170,209
JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z involved_in IBA
ISO
PMID:21873635
UniProtKB:Q04174 (PMID:15208306)
RGD PMID:15208306, PMID:21873635 RGD:13792537 NCBI chr11:72,930,040...72,936,002
Ensembl chr11:72,931,297...72,934,823
Ensembl chr11:72,931,297...72,934,823
JBrowse link
G Pyurf PIGY upstream open reading frame involved_in ISO
IBA
ISS
(PMID:16162815)
PMID:21873635
GO_REF:0000024
RGD
HGNC-UCL
PMID:16162815, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:88,584,242...88,587,877
Ensembl chr 4:88,584,242...88,587,877
JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO (PMID:10320813) RGD PMID:10320813 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      biosynthetic process 6130
        cellular biosynthetic process 5972
          membrane lipid biosynthetic process 127
            glycolipid biosynthetic process 63
              4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process 0
              GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process 0
              GPI anchor biosynthetic process + 32
              Kdo2-lipid A biosynthetic process 0
              beta-L-Ara4N-lipid A biosynthetic process 0
              galactolipid biosynthetic process + 6
              glycosphingolipid biosynthetic process + 26
              lipid A biosynthetic process 0
              polyacyltrehalose biosynthetic process 0
              rhamnolipid biosynthesis 0
              sophorosyloxydocosanoate biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      organic substance metabolic process 11337
        lipid metabolic process 1362
          cellular lipid metabolic process 1018
            membrane lipid metabolic process 187
              glycolipid metabolic process 92
                glycolipid biosynthetic process 63
                  4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process 0
                  GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process 0
                  GPI anchor biosynthetic process + 32
                  Kdo2-lipid A biosynthetic process 0
                  beta-L-Ara4N-lipid A biosynthetic process 0
                  galactolipid biosynthetic process + 6
                  glycosphingolipid biosynthetic process + 26
                  lipid A biosynthetic process 0
                  polyacyltrehalose biosynthetic process 0
                  rhamnolipid biosynthesis 0
                  sophorosyloxydocosanoate biosynthetic process 0
paths to the root