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ONTOLOGY REPORT - ANNOTATIONS

Term:isopentenyl diphosphate biosynthetic process
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Accession:GO:0009240 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.
Synonyms:exact_synonym: IPP biosynthesis;   IPP biosynthetic process;   isopentenyl diphosphate anabolism;   isopentenyl diphosphate biosynthesis;   isopentenyl diphosphate formation;   isopentenyl diphosphate synthesis;   isopentenyl pyrophosphate biosynthesis;   isopentenyl pyrophosphate biosynthetic process


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isopentenyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000062441 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr17:61,602,519...61,608,185 JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:66,539,761...66,547,524
Ensembl chr17:61,629,594...61,637,357 		JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,331,385...61,334,987
Ensembl chr17:61,331,669...61,334,285 		JBrowse link
G Idi2-ps1 isopentenyl-diphosphate delta isomerase 2, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,420,357...61,423,924 JBrowse link
G Idi2l2 isopentenyl-diphosphate delta isomerase 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,372,853...61,386,459
Ensembl chr17:61,373,678...61,386,454 		JBrowse link
G Idi2l3 isopentenyl-diphosphate delta isomerase 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,518,138...61,535,484
Ensembl chr17:61,519,390...61,531,603 		JBrowse link
G LOC102550988 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,451,920...61,457,799
Ensembl chr17:61,451,918...61,458,215 		JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:61,504,294...61,507,015
Ensembl chr17:61,504,535...61,507,015 		JBrowse link
G LOC134482631 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr17:61,420,961...61,551,767 JBrowse link
G LOC134482634 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr17:61,420,961...61,551,767 JBrowse link
G LOC134482635 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482779 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134482866 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G LOC134484812 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase involved_in IDA
IEA
IBA 		GO_REF:0000002
GO_REF:0000104
GO_REF:0000033 		InterPro
UniProt
GO_Central
RGD		 PMID:197206 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104, RGD:2316852 NCBI chr19:50,496,366...50,506,429
Ensembl chr19:50,496,367...50,507,971 		JBrowse link
G Mvk mevalonate kinase involved_in IDA
IEA
IBA 		GO_REF:0000041
GO_REF:0000033 		UniProt
GO_Central
RGD		 PMID:197206 GO_REF:0000033 GO_REF:0000041, RGD:2316852 NCBI chr12:42,141,391...42,158,893
Ensembl chr12:42,141,384...42,158,882 		JBrowse link
G Pmvk phosphomevalonate kinase involved_in IDA
IEA
IBA 		GO_REF:0000041
GO_REF:0000033
GO_REF:0000104 		UniProt
GO_Central
RGD		 PMID:197206 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104, RGD:2316852 NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        biosynthetic process 8630
          organophosphate biosynthetic process 592
            phospholipid biosynthetic process 231
              isopentenyl diphosphate biosynthetic process 17
                isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway + 0
                isopentenyl diphosphate biosynthetic process, mevalonate pathway + 3
Path 2
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      metabolic process 12158
        primary metabolic process 10727
          lipid metabolic process 1485
            isoprenoid metabolic process 143
              isoprenoid biosynthetic process 51
                isopentenyl diphosphate biosynthetic process 17
                  isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway + 0
                  isopentenyl diphosphate biosynthetic process, mevalonate pathway + 3
paths to the root