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ONTOLOGY REPORT - ANNOTATIONS


Term:isopentenyl diphosphate biosynthetic process
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Accession:GO:0009240 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.
Synonyms:exact_synonym: IPP biosynthesis;   IPP biosynthetic process;   isopentenyl diphosphate anabolism;   isopentenyl diphosphate biosynthesis;   isopentenyl diphosphate formation;   isopentenyl diphosphate synthesis;   isopentenyl pyrophosphate biosynthesis;   isopentenyl pyrophosphate biosynthetic process


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isopentenyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028137.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07028157.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,629,592...61,637,357 JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,504,294...61,507,015 JBrowse link
G LOC103694120 isopentenyl-diphosphate delta-isomerase 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,420,357...61,423,924 JBrowse link
G LOC291276 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,549,335...61,553,178 JBrowse link
G RGD1564347 similar to isopentenyl diphosphate delta-isomerase type 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:61,372,853...61,386,459 JBrowse link
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:197206, PMID:21873635 RGD:2316852, RGD:13792537 NCBI chr19:50,496,366...50,506,389 JBrowse link
G Mvk mevalonate kinase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:197206, PMID:21873635 GO_REF:0000041, RGD:2316852, RGD:13792537 NCBI chr12:42,141,391...42,158,858 JBrowse link
G Pmvk phosphomevalonate kinase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:197206, PMID:21873635 GO_REF:0000041, RGD:2316852, RGD:13792537 NCBI chr 2:174,876,586...174,886,365 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      biosynthetic process 6127
        cellular biosynthetic process 5969
          phospholipid biosynthetic process 228
            isopentenyl diphosphate biosynthetic process 10
              isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway + 0
              isopentenyl diphosphate biosynthetic process, mevalonate pathway + 3
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      primary metabolic process 10563
        lipid metabolic process 1363
          cellular lipid metabolic process 1018
            isoprenoid metabolic process 119
              isoprenoid biosynthetic process 40
                isopentenyl diphosphate biosynthetic process 10
                  isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway + 0
                  isopentenyl diphosphate biosynthetic process, mevalonate pathway + 3
paths to the root