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ONTOLOGY REPORT - ANNOTATIONS

Term:cyclic nucleotide catabolic process
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Accession:GO:0009214 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.
Synonyms:exact_synonym: cyclic nucleotide breakdown;   cyclic nucleotide catabolism;   cyclic nucleotide degradation


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cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720 		JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde10a phosphodiesterase 10A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:51,765,743...52,218,086
Ensembl chr 1:51,770,132...52,216,563 		JBrowse link
G Pde4a phosphodiesterase 4A involved_in IEA
ISO
IDA		 GO_REF:0000041
(MGI:1927461|PMID:11267656)
PMID:21323643
(PMID:18095939)
(PMID:9677330)
(PMID:7888306)
(PMID:11306681)
PMID:8557632		 UniProt
RGD		 PMID:7888306 PMID:9677330 PMID:11267656 PMID:11306681 PMID:18095939 More... GO_REF:0000041 MGI:1927461, RGD:151356649, RGD:633604 NCBI chr 8:19,706,649...19,751,937
Ensembl chr 8:19,703,290...19,751,961 		JBrowse link
G Pde4b phosphodiesterase 4B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696 		JBrowse link
G Pde4c phosphodiesterase 4C involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:18,690,727...18,711,555
Ensembl chr16:18,691,700...18,710,640 		JBrowse link
G Pde4d phosphodiesterase 4D involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884 		JBrowse link
G Pde7a phosphodiesterase 7A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:101,714,767...101,806,853
Ensembl chr 2:101,718,444...101,806,681 		JBrowse link
G Pde8a phosphodiesterase 8A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:135,166,143...135,288,986
Ensembl chr 1:135,166,237...135,288,024 		JBrowse link
G Pde8b phosphodiesterase 8B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:26,275,117...26,479,725
Ensembl chr 2:26,276,635...26,509,209 		JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde10a phosphodiesterase 10A involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:51,765,743...52,218,086
Ensembl chr 1:51,770,132...52,216,563 		JBrowse link
G Pde1a phosphodiesterase 1A IMP RGD PMID:16514069 RGD:2312521 NCBI chr 3:64,745,140...65,025,178
Ensembl chr 3:64,747,269...65,024,874 		JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO
IBA
IEA		 (PMID:19828435)
PMID:21873635
GO_REF:0000107
(MGI:4420377|PMID:19632989)		 RGD
Ensembl		 PMID:19632989 PMID:19828435 PMID:21873635 GO_REF:0000107 MGI:4420377, RGD:13792537 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434 		JBrowse link
G Pde5a phosphodiesterase 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000041
(MGI:2450821|PMID:12554648)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12554648 GO_REF:0000041 GO_REF:0000107 MGI:2450821 NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701 		JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
PMID:21873635
(PMID:25799991)
(MGI:1266874|PMID:9624145), (MGI:5634842|PMID:25799991)
GO_REF:0000041		 UniProt
RGD		 PMID:9624145 PMID:25799991 PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:1266874 MGI:5634842, RGD:13792537 NCBI chr20:9,469,809...9,562,949
Ensembl chr20:9,469,848...9,562,948 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19818
    metabolic process 12096
      organic substance metabolic process 11623
        organophosphate metabolic process 936
          nucleoside phosphate metabolic process 500
            nucleotide metabolic process 489
              nucleotide catabolic process 72
                cyclic nucleotide catabolic process 13
                  cAMP catabolic process 8
                  cGMP catabolic process 5
                  regulation of cyclic nucleotide catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19818
    metabolic process 12096
      cellular metabolic process 7496
        cellular aromatic compound metabolic process 3078
          nucleobase-containing compound metabolic process 2826
            nucleobase-containing small molecule metabolic process 573
              nucleoside phosphate metabolic process 500
                nucleotide metabolic process 489
                  nucleotide catabolic process 72
                    cyclic nucleotide catabolic process 13
                      cAMP catabolic process 8
                      cGMP catabolic process 5
                      regulation of cyclic nucleotide catabolic process 0
paths to the root