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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside triphosphate metabolic process
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Accession:GO:0009208 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside triphosphate metabolism

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'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004936474:22,611,037...22,633,208
Ensembl chrNW_004936474:22,602,800...22,633,169 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004936470:5,889,393...5,988,558
Ensembl chrNW_004936470:5,888,469...5,988,525 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:22,611,037...22,633,208
Ensembl chrNW_004936474:22,602,800...22,633,169 		JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936470:5,889,393...5,988,558
Ensembl chrNW_004936470:5,888,469...5,988,525 		JBrowse link
G LOC101972188 nucleoside diphosphate kinase A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182
Ensembl chrNW_004936490:10,633,454...10,649,914 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936694:2,222,055...2,222,977
Ensembl chrNW_004936694:2,221,915...2,222,814 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:553,931...557,744 JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936531:7,296,565...7,318,628
Ensembl chrNW_004936531:7,296,556...7,318,682 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:88,929...96,207
Ensembl chrNW_004936529:88,949...96,236 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936481:17,280,661...17,438,496
Ensembl chrNW_004936481:17,280,464...17,438,084 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:608,139...649,754
Ensembl chrNW_004936540:606,868...649,789 		JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:406,389...446,167
Ensembl chrNW_004936636:407,186...446,125 		JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,896,661...6,920,333
Ensembl chrNW_004936555:6,893,393...6,919,584 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936487:18,267,878...18,271,406
Ensembl chrNW_004936487:18,267,885...18,271,423 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936481:19,505,477...19,560,035
Ensembl chrNW_004936481:19,505,459...19,560,083 		JBrowse link
G Uckl1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936514:11,144,641...11,156,470
Ensembl chrNW_004936514:11,144,026...11,156,455 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10659854 GO_REF:0000118 RGD:2303528 NCBI chrNW_004936493:5,308,268...5,332,934
Ensembl chrNW_004936493:5,310,228...5,332,918 		JBrowse link
G LOC101972188 nucleoside diphosphate kinase A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:10,643,242...10,661,886
Ensembl chrNW_004936490:10,643,242...10,662,109 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182
Ensembl chrNW_004936490:10,633,454...10,649,914 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936694:2,222,055...2,222,977
Ensembl chrNW_004936694:2,221,915...2,222,814 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:553,931...557,744 JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936531:7,296,565...7,318,628
Ensembl chrNW_004936531:7,296,556...7,318,682 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936529:88,929...96,207
Ensembl chrNW_004936529:88,949...96,236 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936481:17,280,661...17,438,496
Ensembl chrNW_004936481:17,280,464...17,438,084 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:608,139...649,754
Ensembl chrNW_004936540:606,868...649,789 		JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:406,389...446,167
Ensembl chrNW_004936636:407,186...446,125 		JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:497,391...517,011
Ensembl chrNW_004936503:496,965...516,888 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16138
    cellular process 15774
      metabolic process 10261
        phosphorus metabolic process 2488
          phosphate-containing compound metabolic process 2485
            nucleoside phosphate metabolic process 570
              nucleoside triphosphate metabolic process 231
                pyrimidine nucleoside triphosphate metabolic process 24
                  pyrimidine ribonucleoside triphosphate metabolic process 17
                    CTP metabolic process + 15
                    TTP metabolic process + 0
                    UTP metabolic process + 11
                    pyrimidine ribonucleoside triphosphate biosynthetic process + 14
                    pyrimidine ribonucleoside triphosphate catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 16138
    cellular process 15774
      metabolic process 10261
        primary metabolic process 9162
          nucleobase-containing compound metabolic process 4903
            nucleobase-containing small molecule metabolic process 597
              nucleoside phosphate metabolic process 570
                nucleoside triphosphate metabolic process 231
                  ribonucleoside triphosphate metabolic process 213
                    pyrimidine ribonucleoside triphosphate metabolic process 17
                      CTP metabolic process + 15
                      TTP metabolic process + 0
                      UTP metabolic process + 11
                      pyrimidine ribonucleoside triphosphate biosynthetic process + 14
                      pyrimidine ribonucleoside triphosphate catabolic process + 1
paths to the root