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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside triphosphate metabolic process
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Accession:GO:0009208 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside triphosphate metabolism


show annotations for term's descendants           Sort by:
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr 6:170,201,749...170,233,105
Ensembl chr 6:170,201,751...170,233,016 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr  X:13,050,740...13,181,131
Ensembl chr  X:13,049,941...13,174,568 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA
IBA		 InterPro
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:170,201,749...170,233,105
Ensembl chr 6:170,201,751...170,233,016 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:13,050,740...13,181,131
Ensembl chr  X:13,049,941...13,174,568 		JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:27,416,308...27,435,044
Ensembl chr12:27,416,346...27,436,140 		JBrowse link
G NME2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chr12:27,439,529...27,445,025
Ensembl chr12:27,439,260...27,445,027 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:40,195,456...40,197,121
Ensembl chr 3:40,195,635...40,196,869 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:41,306,167...41,321,002
Ensembl chr 3:41,306,175...41,310,312 		JBrowse link
G NME5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:140,132,871...140,168,655
Ensembl chr 2:140,131,991...140,167,934 		JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:31,048,367...31,053,285
Ensembl chr13:31,046,948...31,053,130 		JBrowse link
G NME7 NME/NM23 family member 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 4:81,639,907...81,912,276
Ensembl chr 4:81,639,909...81,911,743 		JBrowse link
G NME9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:79,083,604...79,114,959
Ensembl chr13:79,052,208...79,114,506 		JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575 		JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:7,565,610...7,604,464
Ensembl chr14:7,565,604...7,594,057 		JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:271,448,362...271,453,811
Ensembl chr 1:271,448,365...271,453,816 		JBrowse link
G UCK2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:84,838,793...84,919,231
Ensembl chr 4:84,838,802...84,919,236 		JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr17:62,785,419...62,796,396
Ensembl chr17:62,785,422...62,796,378 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IBA		 RGD
GO_Central		 PMID:10659854 GO_REF:0000033 RGD:2303528 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,492 		JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:27,416,308...27,435,044
Ensembl chr12:27,416,346...27,436,140 		JBrowse link
G NME2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chr12:27,439,529...27,445,025
Ensembl chr12:27,439,260...27,445,027 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:40,195,456...40,197,121
Ensembl chr 3:40,195,635...40,196,869 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:41,306,167...41,321,002
Ensembl chr 3:41,306,175...41,310,312 		JBrowse link
G NME5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:140,132,871...140,168,655
Ensembl chr 2:140,131,991...140,167,934 		JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:31,048,367...31,053,285
Ensembl chr13:31,046,948...31,053,130 		JBrowse link
G NME7 NME/NM23 family member 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 4:81,639,907...81,912,276
Ensembl chr 4:81,639,909...81,911,743 		JBrowse link
G NME9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:79,083,604...79,114,959
Ensembl chr13:79,052,208...79,114,506 		JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575 		JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,236,561...217,263,144
Ensembl chr 1:217,236,482...217,261,367 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17647
    cellular process 17210
      metabolic process 10721
        phosphorus metabolic process 2560
          phosphate-containing compound metabolic process 2557
            nucleoside phosphate metabolic process 575
              nucleoside triphosphate metabolic process 229
                pyrimidine nucleoside triphosphate metabolic process 23
                  pyrimidine ribonucleoside triphosphate metabolic process 17
                    CTP metabolic process + 15
                    TTP metabolic process + 0
                    UTP metabolic process + 11
                    pyrimidine ribonucleoside triphosphate biosynthetic process + 14
                    pyrimidine ribonucleoside triphosphate catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 17647
    cellular process 17210
      metabolic process 10721
        primary metabolic process 9441
          nucleobase-containing compound metabolic process 5156
            nucleobase-containing small molecule metabolic process 607
              nucleoside phosphate metabolic process 575
                nucleoside triphosphate metabolic process 229
                  ribonucleoside triphosphate metabolic process 212
                    pyrimidine ribonucleoside triphosphate metabolic process 17
                      CTP metabolic process + 15
                      TTP metabolic process + 0
                      UTP metabolic process + 11
                      pyrimidine ribonucleoside triphosphate biosynthetic process + 14
                      pyrimidine ribonucleoside triphosphate catabolic process + 1
paths to the root