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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside triphosphate metabolic process
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Accession:GO:0009208 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside triphosphate metabolism

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show annotations for term's descendants           Sort by:
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004624892:376,800...421,850 JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004624829:1,373,568...1,438,052
Ensembl chrNW_004624829:1,386,544...1,438,052 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624892:376,800...421,850 JBrowse link
G Ctps2 CTP synthase 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624829:1,373,568...1,438,052
Ensembl chrNW_004624829:1,386,544...1,438,052 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624913:479,893...481,023
Ensembl chrNW_004624913:480,190...481,023 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624913:1,234,292...1,237,602
Ensembl chrNW_004624913:1,234,191...1,237,602 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624743:30,925,210...30,950,129
Ensembl chrNW_004624743:30,925,445...30,950,114 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:73,414,124...73,421,161
Ensembl chrNW_004624730:73,414,798...73,419,261 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997 		JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004624737:11,361,248...11,430,476
Ensembl chrNW_004624737:11,361,737...11,428,288 		JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chrNW_004624758:18,670,609...18,697,594
Ensembl chrNW_004624758:18,670,041...18,697,619 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624760:4,490,118...4,494,707
Ensembl chrNW_004624760:4,490,086...4,494,924 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624826:4,163,830...4,243,048
Ensembl chrNW_004624826:4,163,798...4,229,640 		JBrowse link
G Uckl1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624741:29,568,980...29,581,923
Ensembl chrNW_004624741:29,566,007...29,581,895 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10659854 GO_REF:0000118 RGD:2303528 NCBI chrNW_004624738:9,318,213...9,340,765
Ensembl chrNW_004624738:9,318,232...9,340,925 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624913:479,893...481,023
Ensembl chrNW_004624913:480,190...481,023 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624913:1,234,292...1,237,602
Ensembl chrNW_004624913:1,234,191...1,237,602 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624743:30,925,210...30,950,129
Ensembl chrNW_004624743:30,925,445...30,950,114 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:73,414,124...73,421,161
Ensembl chrNW_004624730:73,414,798...73,419,261 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624826:7,077,885...7,300,398
Ensembl chrNW_004624826:7,078,140...7,258,997 		JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004624737:11,361,248...11,430,476
Ensembl chrNW_004624737:11,361,737...11,428,288 		JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004624736:9,428,736...9,494,645 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15258
    cellular process 14889
      metabolic process 9701
        phosphorus metabolic process 2449
          phosphate-containing compound metabolic process 2446
            nucleoside phosphate metabolic process 538
              nucleoside triphosphate metabolic process 219
                pyrimidine nucleoside triphosphate metabolic process 18
                  pyrimidine ribonucleoside triphosphate metabolic process 14
                    CTP metabolic process + 12
                    TTP metabolic process + 0
                    UTP metabolic process + 8
                    pyrimidine ribonucleoside triphosphate biosynthetic process + 11
                    pyrimidine ribonucleoside triphosphate catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 15258
    cellular process 14889
      metabolic process 9701
        primary metabolic process 8629
          nucleobase-containing compound metabolic process 4601
            nucleobase-containing small molecule metabolic process 565
              nucleoside phosphate metabolic process 538
                nucleoside triphosphate metabolic process 219
                  ribonucleoside triphosphate metabolic process 205
                    pyrimidine ribonucleoside triphosphate metabolic process 14
                      CTP metabolic process + 12
                      TTP metabolic process + 0
                      UTP metabolic process + 8
                      pyrimidine ribonucleoside triphosphate biosynthetic process + 11
                      pyrimidine ribonucleoside triphosphate catabolic process + 1
paths to the root