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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside triphosphate metabolic process
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Accession:GO:0009208 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside triphosphate metabolism


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'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 cytidine 5'-triphosphate synthase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:120,397,065...120,427,473
Ensembl chr 4:120,397,065...120,427,473 		JBrowse link
G Ctps2 cytidine 5'-triphosphate synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:161,684,264...161,817,537
Ensembl chr  X:161,684,234...161,815,504 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 cytidine 5'-triphosphate synthase 1 involved_in ISO
IBA
ISS		 MGI
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:120,397,065...120,427,473
Ensembl chr 4:120,397,065...120,427,473 		JBrowse link
G Ctps2 cytidine 5'-triphosphate synthase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:161,684,264...161,817,537
Ensembl chr  X:161,684,234...161,815,504 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr11:93,849,751...93,859,341
Ensembl chr11:93,847,805...93,859,347 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO
IEA		 RGD
InterPro
GO_Central
MGI		 PMID:1316151 GO_REF:0000002 GO_REF:0000096 MGI:4417868 RGD:729254 NCBI chr11:93,840,640...93,847,082
Ensembl chr11:93,840,640...93,847,085 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr17:25,115,474...25,116,505
Ensembl chr17:25,115,474...25,116,496 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr17:26,310,708...26,314,650
Ensembl chr17:26,310,708...26,314,576 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr18:34,695,687...34,712,168
Ensembl chr18:34,695,687...34,712,168 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 9:109,661,830...109,672,042
Ensembl chr 9:109,661,817...109,672,184 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr 1:164,135,091...164,264,870
Ensembl chr 1:164,131,690...164,265,294 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr 9:99,338,296...99,361,952 JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO
ISS		 MGI
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr19:43,678,128...43,722,292
Ensembl chr19:43,678,111...43,722,136 		JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO
IBA
ISS		 MGI
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:69,574,600...69,604,191
Ensembl chr14:69,574,623...69,604,719 		JBrowse link
G Entpd4b ectonucleoside triphosphate diphosphohydrolase 4B involved_in ISO MGI
GO_Central		 GO_REF:0000119 MGI:4834177 NCBI chr14:69,792,850...69,822,389
Ensembl chr14:69,792,873...69,822,969 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:43,678,128...43,722,292
Ensembl chr19:43,678,111...43,722,136 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 involved_in ISO
ISS		 MGI
UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 2:32,145,014...32,150,117
Ensembl chr 2:32,145,014...32,150,171 		JBrowse link
G Uck2 uridine-cytidine kinase 2 involved_in ISO
ISS
IEA		 MGI
UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000041 GO_REF:0000119 MGI:4834177 NCBI chr 1:167,050,464...167,112,657
Ensembl chr 1:167,050,452...167,112,889 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA
IBA		 RGD
Ensembl
GO_Central
MGI		 PMID:10659854 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:2303528 NCBI chr 5:31,211,964...31,235,823
Ensembl chr 5:31,212,124...31,235,823 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr11:93,849,751...93,859,341
Ensembl chr11:93,847,805...93,859,347 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 involved_in ISO RGD
GO_Central
MGI		 PMID:1316151 GO_REF:0000096 MGI:4417868 RGD:729254 NCBI chr11:93,840,640...93,847,082
Ensembl chr11:93,840,640...93,847,085 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr17:25,115,474...25,116,505
Ensembl chr17:25,115,474...25,116,496 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr17:26,310,708...26,314,650
Ensembl chr17:26,310,708...26,314,576 		JBrowse link
G Nme5 NME/NM23 family member 5 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr18:34,695,687...34,712,168
Ensembl chr18:34,695,687...34,712,168 		JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr 9:109,661,830...109,672,042
Ensembl chr 9:109,661,817...109,672,184 		JBrowse link
G Nme7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr 1:164,135,091...164,264,870
Ensembl chr 1:164,131,690...164,265,294 		JBrowse link
G Nme9 NME/NM23 family member 9 involved_in IEA UniProt
InterPro		 GO_REF:0000002 MGI:2152098 NCBI chr 9:99,338,296...99,361,952 JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO
ISS		 MGI
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr19:43,678,128...43,722,292
Ensembl chr19:43,678,111...43,722,136 		JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 involved_in ISO
IEA		 MGI
GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr19:28,968,715...29,026,122
Ensembl chr19:28,998,233...29,025,361 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28762
    cellular process 18488
      metabolic process 11920
        phosphorus metabolic process 2800
          phosphate-containing compound metabolic process 2797
            nucleoside phosphate metabolic process 683
              nucleoside triphosphate metabolic process 302
                pyrimidine nucleoside triphosphate metabolic process 23
                  pyrimidine ribonucleoside triphosphate metabolic process 17
                    CTP metabolic process + 15
                    TTP metabolic process + 0
                    UTP metabolic process + 11
                    pyrimidine ribonucleoside triphosphate biosynthetic process + 13
                    pyrimidine ribonucleoside triphosphate catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 28762
    cellular process 18488
      metabolic process 11920
        primary metabolic process 10562
          nucleobase-containing compound metabolic process 5694
            nucleobase-containing small molecule metabolic process 713
              nucleoside phosphate metabolic process 683
                nucleoside triphosphate metabolic process 302
                  ribonucleoside triphosphate metabolic process 284
                    pyrimidine ribonucleoside triphosphate metabolic process 17
                      CTP metabolic process + 15
                      TTP metabolic process + 0
                      UTP metabolic process + 11
                      pyrimidine ribonucleoside triphosphate biosynthetic process + 13
                      pyrimidine ribonucleoside triphosphate catabolic process + 1
paths to the root