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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside triphosphate metabolic process
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Accession:GO:0009208 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside triphosphate metabolism


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'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr15:2,067,767...2,093,014
Ensembl chr15:2,067,763...2,093,014 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chr  X:12,759,998...12,867,707
Ensembl chr  X:12,760,015...12,865,111 		JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr15:2,067,767...2,093,014
Ensembl chr15:2,067,763...2,093,014 		JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:12,759,998...12,867,707
Ensembl chr  X:12,760,015...12,865,111 		JBrowse link
G LOC102151128 nucleoside diphosphate kinase, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr22:2,150,639...2,152,716 JBrowse link
G LOC102155863 nucleoside diphosphate kinase A-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:38,816,465...38,817,539 JBrowse link
G LOC102156116 nucleoside diphosphate kinase A-like involved_in IEA InterPro GO_REF:0000002 NCBI chr21:5,535,495...5,536,620 JBrowse link
G LOC483943 nucleoside diphosphate kinase A-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:10,046,217...10,046,745 JBrowse link
G NME1 non-metastatic cells 1, protein (NM23A) expressed in involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955 		JBrowse link
G NME2 non-metastatic cells 2, protein (NM23B) expressed in involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chr 9:27,002,114...27,005,740
Ensembl chr 9:27,001,733...27,015,934 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:40,119,443...40,122,418 JBrowse link
G NME5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176 		JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:40,769,394...40,778,802
Ensembl chr20:40,769,501...40,776,496 		JBrowse link
G NME7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467 		JBrowse link
G NME9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:34,515,003...34,537,386
Ensembl chr23:34,483,520...34,537,312 		JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,565,173...12,601,152
Ensembl chr28:12,564,727...12,600,240 		JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:34,032,104...34,067,772
Ensembl chr25:34,032,055...34,063,281 		JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:52,609,972...52,615,655
Ensembl chr 9:52,609,313...52,614,622 		JBrowse link
G UCK2 uridine-cytidine kinase 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr38:17,475,789...17,555,926
Ensembl chr38:17,479,558...17,579,675 		JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr24:47,412,520...47,423,222
Ensembl chr24:47,412,521...47,432,860 		JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:10659854 RGD:2303528 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635 		JBrowse link
G LOC102151128 nucleoside diphosphate kinase, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr22:2,150,639...2,152,716 JBrowse link
G LOC102155863 nucleoside diphosphate kinase A-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:38,816,465...38,817,539 JBrowse link
G LOC102156116 nucleoside diphosphate kinase A-like involved_in IEA InterPro GO_REF:0000002 NCBI chr21:5,535,495...5,536,620 JBrowse link
G LOC483943 nucleoside diphosphate kinase A-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:10,046,217...10,046,745 JBrowse link
G NME1 non-metastatic cells 1, protein (NM23A) expressed in involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955 		JBrowse link
G NME2 non-metastatic cells 2, protein (NM23B) expressed in involved_in ISO
IEA		 RGD
InterPro		 PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chr 9:27,002,114...27,005,740
Ensembl chr 9:27,001,733...27,015,934 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:40,119,443...40,122,418 JBrowse link
G NME5 NME/NM23 family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176 		JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:40,769,394...40,778,802
Ensembl chr20:40,769,501...40,776,496 		JBrowse link
G NME7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467 		JBrowse link
G NME9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:34,515,003...34,537,386
Ensembl chr23:34,483,520...34,537,312 		JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,565,173...12,601,152
Ensembl chr28:12,564,727...12,600,240 		JBrowse link
UTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chr 9:10,282,452...10,283,479 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17084
    cellular process 16608
      metabolic process 10866
        phosphorus metabolic process 2594
          phosphate-containing compound metabolic process 2591
            nucleoside phosphate metabolic process 629
              nucleoside triphosphate metabolic process 296
                pyrimidine nucleoside triphosphate metabolic process 25
                  pyrimidine ribonucleoside triphosphate metabolic process 20
                    CTP metabolic process + 18
                    TTP metabolic process + 0
                    UTP metabolic process + 14
                    pyrimidine ribonucleoside triphosphate biosynthetic process + 17
                    pyrimidine ribonucleoside triphosphate catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 17084
    cellular process 16608
      metabolic process 10866
        primary metabolic process 9589
          nucleobase-containing compound metabolic process 5115
            nucleobase-containing small molecule metabolic process 654
              nucleoside phosphate metabolic process 629
                nucleoside triphosphate metabolic process 296
                  ribonucleoside triphosphate metabolic process 278
                    pyrimidine ribonucleoside triphosphate metabolic process 20
                      CTP metabolic process + 18
                      TTP metabolic process + 0
                      UTP metabolic process + 14
                      pyrimidine ribonucleoside triphosphate biosynthetic process + 17
                      pyrimidine ribonucleoside triphosphate catabolic process + 1
paths to the root