Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoside triphosphate metabolic process
go back to main search page
Accession:GO:0009199 term browser browse the term
Definition:The chemical reactions and pathways involving a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: ribonucleoside triphosphate metabolism


show annotations for term's descendants           Sort by:
 
'de novo' CTP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:139,475,934...139,505,065
Ensembl chr 5:139,475,934...139,505,065
JBrowse link
G Ctps2 CTP synthase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:33,383,087...33,522,852
Ensembl chr  X:33,383,087...33,522,836
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 IDA RGD PMID:5484813 RGD:2301093 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
G Ak9 adenylate kinase 9 ISO
IBA
(PMID:23416111)
PMID:21873635
RGD PMID:23416111, PMID:21873635 RGD:13792537 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034673.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:83,483,172...83,483,513 JBrowse link
G Aldoa aldolase, fructose-bisphosphate A ISO (PMID:14615364) RGD PMID:14615364 NCBI chr 1:198,228,387...198,233,988
Ensembl chr 1:198,228,387...198,233,588
JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha ISO (PMID:21106936) RGD PMID:21106936 NCBI chr18:74,156,553...74,164,490
Ensembl chr18:74,156,553...74,164,495
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO (PMID:17510399), (PMID:21106936) RGD PMID:17510399 PMID:21106936 NCBI chr 7:2,504,708...2,511,748
Ensembl chr 7:2,504,695...2,511,749
JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:72,209,321...72,231,562
Ensembl chr17:72,209,373...72,394,271
JBrowse link
G Atp5f1d ATP synthase F1 subunit delta TAS RGD PMID:9578578 RGD:724594 NCBI chr 7:12,426,807...12,432,120
Ensembl chr 7:12,426,809...12,432,130
JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 IMP RGD PMID:22209705 RGD:13800744 NCBI chr10:83,895,941...83,898,640
Ensembl chr10:83,895,947...83,898,527
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP IGI RGD PMID:7864899 RGD:14696824 NCBI chr11:32,081,606...32,087,918
Ensembl chr11:32,081,574...32,088,002
JBrowse link
G Dguok deoxyguanosine kinase IMP RGD PMID:30404003 RGD:15039296 NCBI chr 4:115,180,433...115,208,061
Ensembl chr 4:115,180,433...115,208,061
JBrowse link
G Dmac2l distal membrane arm assembly complex 2 like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:92,057,782...92,076,022
Ensembl chr 6:92,057,807...92,076,021
JBrowse link
G Ldhc lactate dehydrogenase C IEA
ISO
GO_REF:0000107
MGI:3775042 (MGI:3775056|PMID:18367675)
Ensembl
RGD
PMID:18367675 GO_REF:0000107 MGI:3775056 NCBI chr 1:102,914,875...102,931,843
Ensembl chr 1:102,915,191...102,931,839
JBrowse link
G LOC100910067 bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC686324 similar to Protein UNQ655/PRO1286 homolog precursor IEA GO_REF:0000043 UniProt GO_REF:0000043
G Nudt2 nudix hydrolase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,845,819...57,860,658
Ensembl chr 5:57,845,819...57,860,658
JBrowse link
G Pklr pyruvate kinase L/R IDA RGD PMID:5492954, PMID:4273555 RGD:2302789, RGD:2302790 NCBI chr 2:188,449,158...188,458,034
Ensembl chr 2:188,449,210...188,459,592
JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:4273555 RGD:2302790 NCBI chr 8:64,480,963...64,502,957
Ensembl chr 8:64,481,172...64,502,722
JBrowse link
G Slc25a13 solute carrier family 25 member 13 ISO (PMID:12851387) RGD PMID:12851387 NCBI chr 4:31,134,165...31,757,006
Ensembl chr 4:31,608,269...31,730,386
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:10513816)
GO_REF:0000024
RGD
UniProt
PMID:10513816 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:225,076,301...225,077,079
Ensembl chr 1:225,076,301...225,077,079
JBrowse link
ATP synthesis coupled proton transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064224.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:69,950,500...69,950,898 JBrowse link
G AC105515.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr14:83,220,265...83,220,414 JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr18:74,156,553...74,164,490
Ensembl chr18:74,156,553...74,164,495
JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr17:72,209,321...72,231,562
Ensembl chr17:72,209,373...72,394,271
JBrowse link
G Atp5f1d ATP synthase F1 subunit delta TAS
IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:9578578, PMID:21873635 GO_REF:0000002, RGD:724594, RGD:13792537 NCBI chr 7:12,426,807...12,432,120
Ensembl chr 7:12,426,809...12,432,130
JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:83,895,941...83,898,640
Ensembl chr10:83,895,947...83,898,527
JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 7:144,264,207...144,272,578
Ensembl chr 7:144,264,199...144,272,578
JBrowse link
G Atp5mc3 ATP synthase membrane subunit c locus 3 IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 3:60,811,218...60,813,903
Ensembl chr 3:60,811,210...60,813,869
JBrowse link
G Atp5mg ATP synthase membrane subunit g IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:49,220,441...49,227,273
Ensembl chr 8:49,220,443...49,227,273
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,566,385...208,577,147
Ensembl chr 2:208,566,385...208,577,146
JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:103,967,340...103,972,552
Ensembl chr10:103,967,312...103,972,668
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:32,081,606...32,087,918
Ensembl chr11:32,081,574...32,088,002
JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:61,531,386...61,584,634
Ensembl chr11:61,531,416...61,584,634
JBrowse link
G LOC100911417 ATP synthase subunit b, mitochondrial-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,408,890...208,420,159
Ensembl chr 2:208,408,890...208,420,163
JBrowse link
G LOC500350 LRRGT00139 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,347,410...170,382,370
Ensembl chr 4:170,347,410...170,382,370
JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599
JBrowse link
G Taf3 TATA-box binding protein associated factor 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:72,240,785...72,393,448
Ensembl chr17:72,209,373...72,394,271
JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 ISO
IBA
(PMID:16179339), (PMID:24870241)
PMID:21873635
RGD PMID:16179339 PMID:24870241, PMID:21873635 RGD:13792537 NCBI chr 5:139,475,934...139,505,065
Ensembl chr 5:139,475,934...139,505,065
JBrowse link
G Ctps2 CTP synthase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:33,383,087...33,522,852
Ensembl chr  X:33,383,087...33,522,836
JBrowse link
G Decr2 2,4-dienoyl-CoA reductase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,451,850...15,460,227
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IDA RGD PMID:1316151 RGD:729254 NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:14,258,232...14,259,365
Ensembl chr10:14,258,380...14,259,336
JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,461,567...15,465,422
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Nme5 NME/NM23 family member 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:27,357,460...27,374,641
Ensembl chr18:27,357,413...27,374,603
JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:117,920,912...117,928,148
Ensembl chr 8:117,920,944...117,928,195
JBrowse link
G Nme7 NME/NM23 family member 7 IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr13:82,607,844...82,737,383
Ensembl chr13:82,626,685...82,737,343
JBrowse link
CTP salvage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uck1 uridine-cytidine kinase 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:11,271,874...11,277,757
Ensembl chr 3:11,271,885...11,277,757
JBrowse link
G Uck2 uridine-cytidine kinase 2 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr13:85,376,716...85,443,976
Ensembl chr13:85,376,716...85,443,976
JBrowse link
G Uckl1 uridine-cytidine kinase 1-like 1 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:177,066,022...177,078,611
Ensembl chr 3:177,066,014...177,078,594
JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Decr2 2,4-dienoyl-CoA reductase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,451,850...15,460,227
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:56,478,383...56,493,987
Ensembl chr 4:56,478,384...56,493,923
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,346,983...117,351,619
Ensembl chr 8:117,347,029...117,351,610
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IDA RGD PMID:1316151 RGD:729254 NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:14,258,232...14,259,365
Ensembl chr10:14,258,380...14,259,336
JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,461,567...15,465,422
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Nme5 NME/NM23 family member 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:27,357,460...27,374,641
Ensembl chr18:27,357,413...27,374,603
JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:117,920,912...117,928,148
Ensembl chr 8:117,920,944...117,928,195
JBrowse link
G Nme7 NME/NM23 family member 7 IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr13:82,607,844...82,737,383
Ensembl chr13:82,626,685...82,737,343
JBrowse link
GTP metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO
IEA
(PMID:11485571)
GO_REF:0000104
RGD
UniProt
PMID:11485571 GO_REF:0000104 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
G Ak4 adenylate kinase 4 ISO (PMID:19766732) RGD PMID:19766732 NCBI chr 5:120,250,318...120,309,153
Ensembl chr 5:120,250,616...120,305,897
JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 ISO UniProtKB:O08739 (MGI:5489878|PMID:22212473), (MGI:5506958|PMID:23911318) RGD PMID:22212473 PMID:23911318 MGI:5489878 MGI:5506958 NCBI chr 2:210,861,624...210,874,348
Ensembl chr 2:210,861,625...210,874,304
JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 IEA
ISO
GO_REF:0000107
UniProtKB:Q9DBT5 (MGI:5506958|PMID:23911318), (MGI:5529149|PMID:23078545)
Ensembl
RGD
PMID:23078545 PMID:23911318 GO_REF:0000107 MGI:5506958 MGI:5529149 NCBI chr 1:175,585,301...175,630,479
Ensembl chr 1:175,586,097...175,630,467
JBrowse link
G Efl1 elongation factor like GTPase 1 ISO (PMID:21536732) RGD PMID:21536732 NCBI chr 1:144,601,425...144,740,634
Ensembl chr 1:144,601,410...144,740,735
JBrowse link
G Gimap7 GTPase, IMAP family member 7 ISO (PMID:23454188) RGD PMID:23454188 NCBI chr 4:78,354,335...78,358,505
Ensembl chr 4:78,354,335...78,358,503
JBrowse link
G Gnai3 G protein subunit alpha i3 ISO
ISS
(PMID:19478087)
GO_REF:0000024
RGD
UniProt
PMID:19478087 GO_REF:0000024 NCBI chr 2:210,896,779...210,934,733
Ensembl chr 2:210,896,656...210,934,749
JBrowse link
G Gtpbp1 GTP binding protein 1 IDA PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr 7:120,923,274...120,947,723
Ensembl chr 7:120,923,274...120,947,723
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (PMID:21048939) RGD PMID:21048939 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Mfn1 mitofusin 1 ISO
IEA
ISS
(PMID:27920125)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27920125 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase ISO
ISS
(PMID:20185555)
GO_REF:0000024
RGD
UniProt
PMID:20185555 GO_REF:0000024 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Rab23 RAB23, member RAS oncogene family ISO (PMID:22365972) RGD PMID:22365972 NCBI chr 9:38,469,784...38,496,185
Ensembl chr 9:38,470,298...38,495,176
JBrowse link
G Ran RAN, member RAS oncogene family ISS
ISO
GO_REF:0000024
(PMID:26272610)
UniProt
RGD
PMID:26272610 GO_REF:0000024 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rhoa ras homolog family member A IDA PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rhoq ras homolog family member Q ISO (PMID:10445846) RGD PMID:10445846 NCBI chr 6:10,533,151...10,568,582
Ensembl chr 6:10,533,151...10,568,581
JBrowse link
ITP catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase ISO MGI:4942407 (MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:5009783 NCBI chr 3:123,209,611...123,221,266
Ensembl chr 3:123,209,608...123,221,269
JBrowse link
ITP metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO
IEA
(PMID:11485571)
GO_REF:0000104
RGD
UniProt
PMID:11485571 GO_REF:0000104 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC096404.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr20:29,577,518...29,579,578 JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha ISO (PMID:12110673) RGD PMID:12110673 NCBI chr18:74,156,553...74,164,490
Ensembl chr18:74,156,553...74,164,495
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta IBA
ISO
IEA
PMID:21873635
(PMID:12110673)
GO_REF:0000107
RGD
Ensembl
PMID:12110673, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:2,504,708...2,511,748
Ensembl chr 7:2,504,695...2,511,749
JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma ISO (PMID:12110673) RGD PMID:12110673 NCBI chr17:72,209,321...72,231,562
Ensembl chr17:72,209,373...72,394,271
JBrowse link
G Atp5f1d ATP synthase F1 subunit delta IEA
ISO
GO_REF:0000107
(PMID:12110673)
Ensembl
RGD
PMID:12110673 GO_REF:0000107 NCBI chr 7:12,426,807...12,432,120
Ensembl chr 7:12,426,809...12,432,130
JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon ISO (PMID:12110673) RGD PMID:12110673 NCBI chr 3:172,563,105...172,566,007
Ensembl chr 3:172,563,105...172,566,010
JBrowse link
G Atp5me ATP synthase membrane subunit e ISO (PMID:12110673) RGD PMID:12110673 NCBI chr14:2,325,308...2,326,436
Ensembl chr14:2,325,308...2,326,436
JBrowse link
G Atp5mf ATP synthase membrane subunit f ISO
IBA
(PMID:12110673)
PMID:21873635
RGD PMID:12110673, PMID:21873635 RGD:13792537 NCBI chr12:11,191,799...11,198,369
Ensembl chr12:11,191,812...11,198,369
JBrowse link
G Atp5mg ATP synthase membrane subunit g ISO (PMID:12110673) RGD PMID:12110673 NCBI chr 8:49,220,441...49,227,273
Ensembl chr 8:49,220,443...49,227,273
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO (PMID:12110673) RGD PMID:12110673 NCBI chr 2:208,566,385...208,577,147
Ensembl chr 2:208,566,385...208,577,146
JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d ISO (PMID:12110673) RGD PMID:12110673 NCBI chr10:103,967,340...103,972,552
Ensembl chr10:103,967,312...103,972,668
JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 ISO (PMID:12110673) RGD PMID:12110673 NCBI chr11:24,286,806...24,294,419
Ensembl chr11:24,286,787...24,294,179
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO
IBA
(PMID:15850986)
PMID:21873635
RGD PMID:15850986, PMID:21873635 RGD:13792537 NCBI chr11:32,081,606...32,087,918
Ensembl chr11:32,081,574...32,088,002
JBrowse link
G Cox5b cytochrome c oxidase subunit 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:43,259,706...43,262,039
Ensembl chr 9:43,259,709...43,262,040
JBrowse link
G Cyc1 cytochrome c-1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,409,576...117,411,953
Ensembl chr 7:117,409,576...117,411,953
JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 ISO (PMID:12110673) RGD PMID:12110673 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599
JBrowse link
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 ISO (PMID:12110673) RGD PMID:12110673 NCBI chr MT:7,758...7,961
Ensembl chr MT:7,758...7,961
JBrowse link
G Stoml2 stomatin like 2 ISO
ISS
(PMID:21746876)
(MGI:3849358|PMID:19360003), (MGI:5438519|PMID:23028053)
GO_REF:0000024
RGD
UniProt
PMID:19360003 PMID:21746876 PMID:23028053 GO_REF:0000024 MGI:3849358 MGI:5438519 NCBI chr 5:58,472,561...58,476,158
Ensembl chr 5:58,472,550...58,476,251
JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IMP RGD PMID:21325440 RGD:9685453 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Flcn folliculin ISS
ISO
GO_REF:0000024
(MGI:5463828|PMID:23150719)
UniProt
RGD
PMID:23150719 GO_REF:0000024 MGI:5463828 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (PMID:24289924) RGD PMID:24289924 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (PMID:20165904) RGD PMID:20165904 NCBI chr 9:91,667,748...91,683,468
Ensembl chr 9:91,665,986...91,882,927
JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Eno1 enolase 1 ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Il4 interleukin 4 ISO (MGI:6304699|PMID:29061364) RGD PMID:29061364 MGI:6304699 NCBI chr10:38,963,979...38,969,531
Ensembl chr10:38,963,979...38,969,531
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IGI
IMP
PMID:15459207 CAFA PMID:15459207, PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Mt-co2 mitochondrially encoded cytochrome c oxidase II IMP RGD PMID:19306371 RGD:13506652 NCBI chr MT:7,006...7,689
Ensembl chr MT:7,006...7,689
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22629444 RGD:7240532 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 IMP RGD PMID:26888427 RGD:11040458 NCBI chr 1:162,369,801...162,376,024
Ensembl chr 1:162,369,801...162,376,023
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (MGI:5306739|PMID:21080215) RGD PMID:21080215 MGI:5306739 NCBI chr 9:91,667,748...91,683,468
Ensembl chr 9:91,665,986...91,882,927
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:31574452) RGD PMID:31574452 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISS
ISO
GO_REF:0000024
(MGI:5463828|PMID:23150719)
UniProt
RGD
PMID:23150719 GO_REF:0000024 MGI:5463828 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:24096089 RGD:10413842 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:24747689) RGD PMID:24747689 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Stat3 signal transducer and activator of transcription 3 IMP RGD PMID:23590160 RGD:8694322 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Taz tafazzin IMP RGD PMID:20348225 RGD:13432160 NCBI chr  X:156,421,006...156,429,461
Ensembl chr  X:156,421,009...156,428,593
JBrowse link
G Tmsb4x thymosin beta 4, X-linked ISO (PMID:21106936) RGD PMID:21106936 NCBI chr  X:28,593,405...28,617,267
Ensembl chr  X:28,593,405...28,595,395
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:5906931 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Vcp valosin-containing protein ISO (PMID:23498975) RGD PMID:23498975 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak4 adenylate kinase 4 ISO
ISS
(PMID:24767988)
GO_REF:0000024
RGD
UniProt
PMID:24767988 GO_REF:0000024 NCBI chr 5:120,250,318...120,309,153
Ensembl chr 5:120,250,616...120,305,897
JBrowse link
G Sphk2 sphingosine kinase 2 ISO (MGI:5641585|PMID:25637806) RGD PMID:25637806 MGI:5641585 NCBI chr 1:101,692,972...101,700,604
Ensembl chr 1:101,692,973...101,697,277
JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antkmt adenine nucleotide translocase lysine methyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,160,037...15,161,895
Ensembl chr10:15,159,803...15,161,938
JBrowse link
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:6277238|PMID:30530489)
(PMID:30530489)
UniProt
RGD
PMID:30530489, PMID:21873635 GO_REF:0000024 MGI:6277238, RGD:13792537 NCBI chr 2:84,678,892...84,694,152
Ensembl chr 2:84,678,948...84,693,988
JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 ISO (MGI:6245118|PMID:30318146) RGD PMID:30318146 MGI:6245118 NCBI chr12:24,668,398...24,669,464
Ensembl chr12:24,668,398...24,669,464
JBrowse link
UTP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10659854, PMID:21873635 RGD:2303528, RGD:13792537 NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
JBrowse link
G Decr2 2,4-dienoyl-CoA reductase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,451,850...15,460,227
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IDA RGD PMID:1316151 RGD:729254 NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:14,258,232...14,259,365
Ensembl chr10:14,258,380...14,259,336
JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,461,567...15,465,422
Ensembl chr10:15,431,638...15,465,413
JBrowse link
G Nme5 NME/NM23 family member 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:27,357,460...27,374,641
Ensembl chr18:27,357,413...27,374,603
JBrowse link
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:117,920,912...117,928,148
Ensembl chr 8:117,920,944...117,928,195
JBrowse link
G Nme7 NME/NM23 family member 7 IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr13:82,607,844...82,737,383
Ensembl chr13:82,626,685...82,737,343
JBrowse link
UTP metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO
IEA
(PMID:11485571)
GO_REF:0000107
RGD
Ensembl
PMID:11485571 GO_REF:0000107 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      organic substance metabolic process 11552
        organophosphate metabolic process 947
          nucleoside phosphate metabolic process 517
            nucleoside triphosphate metabolic process 125
              ribonucleoside triphosphate metabolic process 98
                purine ribonucleoside triphosphate metabolic process + 92
                pyrimidine ribonucleoside triphosphate metabolic process + 15
                ribonucleoside triphosphate biosynthetic process + 84
                ribonucleoside triphosphate catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      nitrogen compound metabolic process 10212
        cellular nitrogen compound metabolic process 6678
          nucleobase-containing compound metabolic process 5476
            nucleobase-containing small molecule metabolic process 591
              nucleoside phosphate metabolic process 517
                nucleoside triphosphate metabolic process 125
                  ribonucleoside triphosphate metabolic process 98
                    purine ribonucleoside triphosphate metabolic process + 92
                    pyrimidine ribonucleoside triphosphate metabolic process + 15
                    ribonucleoside triphosphate biosynthetic process + 84
                    ribonucleoside triphosphate catabolic process + 1
paths to the root