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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine deoxyribonucleoside diphosphate biosynthetic process
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Accession:GO:0009197 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside diphosphate anabolism;   pyrimidine deoxyribonucleoside diphosphate biosynthesis;   pyrimidine deoxyribonucleoside diphosphate formation;   pyrimidine deoxyribonucleoside diphosphate synthesis


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dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830 		JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:192455 GO_REF:0000033, RGD:5133256 NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:43,073,796...43,085,183 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA
IEA		 (PMID:12614151)
GO_REF:0000033
(PMID:8845311)
GO_REF:0000002		 RGD
GO_Central
InterPro		 PMID:8845311 PMID:12614151 PMID:220041 GO_REF:0000002 GO_REF:0000033, RGD:5133687 NCBI chr 9:101,762,899...101,771,733
Ensembl chr 9:94,315,552...94,324,870 		JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830 		JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:192455 GO_REF:0000033, RGD:5133256 NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:43,073,796...43,085,183 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:101,762,899...101,771,733
Ensembl chr 9:94,315,552...94,324,870 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        biosynthetic process 8676
          nucleobase-containing compound biosynthetic process 4809
            nucleoside phosphate biosynthetic process 312
              nucleoside diphosphate biosynthetic process 15
                pyrimidine nucleoside diphosphate biosynthetic process 7
                  pyrimidine deoxyribonucleoside diphosphate biosynthetic process 3
                    dCDP biosynthetic process + 1
                    dTDP biosynthetic process 2
                    dUDP biosynthetic process 3
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        primary metabolic process 10763
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 733
              nucleoside phosphate metabolic process 699
                nucleoside diphosphate metabolic process 188
                  deoxyribonucleoside diphosphate metabolic process 5
                    deoxyribonucleoside diphosphate biosynthetic process 4
                      pyrimidine deoxyribonucleoside diphosphate biosynthetic process 3
                        dCDP biosynthetic process + 1
                        dTDP biosynthetic process 2
                        dUDP biosynthetic process 3
paths to the root