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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine deoxyribonucleoside diphosphate biosynthetic process
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Accession:GO:0009197 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside diphosphate anabolism;   pyrimidine deoxyribonucleoside diphosphate biosynthesis;   pyrimidine deoxyribonucleoside diphosphate formation;   pyrimidine deoxyribonucleoside diphosphate synthesis



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dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:77260|PMID:8845311)
(PMID:12614151)
PMID:21873635
RGD PMID:8845311 PMID:12614151 PMID:220041 PMID:21873635 MGI:77260, RGD:5133687, RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455 PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:94,315,552...94,324,386
Ensembl chr 9:94,315,552...94,324,870
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    metabolic process 12347
      organic substance metabolic process 11867
        organophosphate metabolic process 1058
          nucleoside phosphate metabolic process 634
            nucleoside diphosphate metabolic process 182
              nucleoside diphosphate biosynthetic process 15
                pyrimidine nucleoside diphosphate biosynthetic process 6
                  pyrimidine deoxyribonucleoside diphosphate biosynthetic process 3
                    dCDP biosynthetic process + 1
                    dTDP biosynthetic process 2
                    dUDP biosynthetic process 3
Path 2
Term Annotations click to browse term
  biological_process 20094
    metabolic process 12347
      cellular metabolic process 10465
        cellular aromatic compound metabolic process 6024
          nucleobase-containing compound metabolic process 5784
            nucleobase-containing small molecule metabolic process 708
              nucleoside phosphate metabolic process 634
                nucleoside diphosphate metabolic process 182
                  nucleoside diphosphate biosynthetic process 15
                    pyrimidine nucleoside diphosphate biosynthetic process 6
                      pyrimidine deoxyribonucleoside diphosphate biosynthetic process 3
                        dCDP biosynthetic process + 1
                        dTDP biosynthetic process 2
                        dUDP biosynthetic process 3
paths to the root