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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine deoxyribonucleoside diphosphate metabolic process
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Accession:GO:0009196 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine deoxyribonucleoside diphosphate metabolism

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dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chr20:85,541,796...85,584,167
Ensembl chr20:85,541,205...85,584,068 		JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:192455 GO_REF:0000118 RGD:5133256 NCBI chr14:100,804,295...100,820,565
Ensembl chr14:100,804,400...100,819,027 		JBrowse link
G DTYMK deoxythymidylate kinase involved_in
acts_upstream_of_or_within 		ISO
IEA 		RGD
InterPro
TreeGrafter
Ensembl		 PMID:220041 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:5133687 NCBI chr10:127,722,091...127,733,662
Ensembl chr10:127,721,784...127,733,476 		JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chr20:85,541,796...85,584,167
Ensembl chr20:85,541,205...85,584,068 		JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 involved_in ISO
IEA 		RGD
TreeGrafter		 PMID:192455 GO_REF:0000118 RGD:5133256 NCBI chr14:100,804,295...100,820,565
Ensembl chr14:100,804,400...100,819,027 		JBrowse link
G DTYMK deoxythymidylate kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:127,722,091...127,733,662
Ensembl chr10:127,721,784...127,733,476 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19706
    cellular process 19211
      metabolic process 12971
        phosphorus metabolic process 2191
          phosphate-containing compound metabolic process 2187
            nucleoside phosphate metabolic process 610
              nucleoside diphosphate metabolic process 138
                pyrimidine nucleoside diphosphate metabolic process 9
                  pyrimidine deoxyribonucleoside diphosphate metabolic process 3
                    dCDP metabolic process + 1
                    dTDP metabolic process + 2
                    dUDP metabolic process + 3
                    pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
                    pyrimidine deoxyribonucleoside diphosphate catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19706
    cellular process 19211
      metabolic process 12971
        primary metabolic process 11397
          nucleobase-containing compound metabolic process 7275
            nucleobase-containing small molecule metabolic process 637
              nucleoside phosphate metabolic process 610
                nucleoside diphosphate metabolic process 138
                  deoxyribonucleoside diphosphate metabolic process 6
                    pyrimidine deoxyribonucleoside diphosphate metabolic process 3
                      dCDP metabolic process + 1
                      dTDP metabolic process + 2
                      dUDP metabolic process + 3
                      pyrimidine deoxyribonucleoside diphosphate biosynthetic process + 3
                      pyrimidine deoxyribonucleoside diphosphate catabolic process + 0
paths to the root