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ONTOLOGY REPORT - ANNOTATIONS


Term:pyrimidine ribonucleoside diphosphate biosynthetic process
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Accession:GO:0009194 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside diphosphate anabolism;   pyrimidine ribonucleoside diphosphate biosynthesis;   pyrimidine ribonucleoside diphosphate formation;   pyrimidine ribonucleoside diphosphate synthesis



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CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3010881 PMID:21873635 RGD:5133253, RGD:13792537 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:25678555) RGD PMID:25678555 NCBI chr 6:25,292,133...25,315,176
Ensembl chr 6:25,292,133...25,319,861
JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in IDA
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11912132)
Ensembl
RGD
PMID:11912132 PMID:3010881 PMID:21873635 GO_REF:0000107, RGD:5133253, RGD:13792537 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830
JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (MGI:6282496|PMID:30449682), (MGI:6720231|PMID:6249586) RGD PMID:6249586 PMID:30449682 MGI:6282496 MGI:6720231 NCBI chr19:37,551,858...37,573,327
Ensembl chr19:37,558,177...37,591,654
JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (MGI:1289111|PMID:2419341), (MGI:6720230|PMID:6154574) RGD PMID:2419341 PMID:6154574 MGI:1289111 MGI:6720230 NCBI chr11:66,806,107...66,816,520
Ensembl chr11:66,806,045...66,821,903
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19896
    metabolic process 12209
      organic substance metabolic process 11750
        organophosphate metabolic process 947
          nucleoside phosphate metabolic process 507
            nucleoside diphosphate metabolic process 33
              nucleoside diphosphate biosynthetic process 13
                pyrimidine nucleoside diphosphate biosynthetic process 6
                  pyrimidine ribonucleoside diphosphate biosynthetic process 4
                    CDP biosynthetic process 1
                    TDP biosynthetic process 0
                    UDP biosynthetic process 4
Path 2
Term Annotations click to browse term
  biological_process 19896
    metabolic process 12209
      cellular metabolic process 9628
        cellular aromatic compound metabolic process 5912
          nucleobase-containing compound metabolic process 5679
            nucleobase-containing small molecule metabolic process 582
              nucleoside phosphate metabolic process 507
                nucleoside diphosphate metabolic process 33
                  nucleoside diphosphate biosynthetic process 13
                    pyrimidine nucleoside diphosphate biosynthetic process 6
                      pyrimidine ribonucleoside diphosphate biosynthetic process 4
                        CDP biosynthetic process 1
                        TDP biosynthetic process 0
                        UDP biosynthetic process 4
paths to the root