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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside diphosphate metabolic process
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Accession:GO:0009193 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside diphosphate metabolism

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CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:25678555) MGI PMID:25678555 NCBI chrNW_004955469:9,203,433...9,227,526
Ensembl chrNW_004955469:9,203,434...9,227,865 		JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in ISO (PMID:11912132) RGD
MGI		 PMID:3010881 PMID:11912132 RGD:5133253 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO (MGI:6282496|PMID:30449682), (MGI:6720231|PMID:6249586) MGI PMID:6249586 PMID:30449682 MGI:6282496 MGI:6720231 NCBI chrNW_004955484:4,699,743...4,713,466
Ensembl chrNW_004955484:4,699,722...4,713,466 		JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (MGI:6720230|PMID:6154574)
(MGI:1289111|PMID:2419341)		 MGI PMID:2419341 PMID:6154574 MGI:1289111 MGI:6720230 NCBI chrNW_004955427:23,825,529...23,841,427
Ensembl chrNW_004955427:23,825,523...23,841,152 		JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452), (PMID:9556635) UniProt PMID:9556635 PMID:10858452 NCBI chrNW_004955403:46,609,211...46,637,622
Ensembl chrNW_004955403:46,609,211...46,637,643 		JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:1927266|PMID:10369669), (MGI:4881347|PMID:21074248) UniProt PMID:10369669 PMID:21074248 MGI:1927266 MGI:4881347 NCBI chrNW_004955523:1,407,812...1,441,829
Ensembl chrNW_004955523:1,421,749...1,441,829 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12287
    metabolic process 7843
      small molecule metabolic process 1296
        nucleobase-containing small molecule metabolic process 449
          nucleoside phosphate metabolic process 409
            nucleoside diphosphate metabolic process 108
              pyrimidine nucleoside diphosphate metabolic process 8
                pyrimidine ribonucleoside diphosphate metabolic process 6
                  CDP metabolic process + 1
                  TDP metabolic process + 0
                  UDP metabolic process + 6
                  pyrimidine ribonucleoside diphosphate biosynthetic process + 4
                  pyrimidine ribonucleoside diphosphate catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 12287
    metabolic process 7843
      cellular metabolic process 6234
        cellular nitrogen compound metabolic process 4252
          nucleobase-containing compound metabolic process 3866
            nucleobase-containing small molecule metabolic process 449
              nucleoside phosphate metabolic process 409
                nucleoside diphosphate metabolic process 108
                  ribonucleoside diphosphate metabolic process 100
                    pyrimidine ribonucleoside diphosphate metabolic process 6
                      CDP metabolic process + 1
                      TDP metabolic process + 0
                      UDP metabolic process + 6
                      pyrimidine ribonucleoside diphosphate biosynthetic process + 4
                      pyrimidine ribonucleoside diphosphate catabolic process + 2
paths to the root