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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside diphosphate metabolic process
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Accession:GO:0009193 term browser browse the term
Definition:The chemical reactions and pathways involving pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside diphosphate metabolism


show annotations for term's descendants           Sort by:
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:3010881 PMID:21873635 RGD:5133253, RGD:13792537 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830 		JBrowse link
UDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:25678555) RGD PMID:25678555 NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861 		JBrowse link
G Cmpk1 cytidine/uridine monophosphate kinase 1 involved_in IDA
IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
(PMID:11912132)		 Ensembl
RGD		 PMID:11912132 PMID:3010881 PMID:21873635 GO_REF:0000107, RGD:5133253, RGD:13792537 NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830 		JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) involved_in ISO
IEA		 (MGI:6282496|PMID:30449682), (MGI:6720231|PMID:6249586)
GO_REF:0000107		 RGD
Ensembl		 PMID:6249586 PMID:30449682 GO_REF:0000107 MGI:6282496 MGI:6720231 NCBI chr19:37,551,858...37,573,327
Ensembl chr19:37,558,177...37,591,654 		JBrowse link
G Umps uridine monophosphate synthetase involved_in ISO (MGI:1289111|PMID:2419341), (MGI:6720230|PMID:6154574) RGD PMID:2419341 PMID:6154574 MGI:1289111 MGI:6720230 NCBI chr11:66,806,107...66,816,520
Ensembl chr11:66,806,045...66,821,903 		JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO
IBA		 (PMID:10858452), (PMID:9556635)
PMID:21873635		 RGD PMID:9556635 PMID:10858452 PMID:21873635 RGD:13792537 NCBI chr15:44,630,878...44,658,654
Ensembl chr15:44,630,873...44,658,706 		JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:1927266|PMID:10369669), (MGI:4881347|PMID:21074248)		 UniProt
RGD		 PMID:10369669 PMID:21074248 GO_REF:0000024 MGI:1927266 MGI:4881347 NCBI chr 6:104,019,095...104,055,311
Ensembl chr 6:104,019,185...104,055,530 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      small molecule metabolic process 1918
        nucleobase-containing small molecule metabolic process 684
          nucleoside phosphate metabolic process 612
            nucleoside diphosphate metabolic process 167
              pyrimidine nucleoside diphosphate metabolic process 8
                pyrimidine ribonucleoside diphosphate metabolic process 6
                  CDP metabolic process + 1
                  TDP metabolic process + 0
                  UDP metabolic process + 6
                  pyrimidine ribonucleoside diphosphate biosynthetic process + 4
                  pyrimidine ribonucleoside diphosphate catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 19553
    metabolic process 11538
      cellular metabolic process 10124
        cellular nitrogen compound metabolic process 6555
          nucleobase-containing compound metabolic process 5539
            nucleobase-containing small molecule metabolic process 684
              nucleoside phosphate metabolic process 612
                nucleoside diphosphate metabolic process 167
                  ribonucleoside diphosphate metabolic process 161
                    pyrimidine ribonucleoside diphosphate metabolic process 6
                      CDP metabolic process + 1
                      TDP metabolic process + 0
                      UDP metabolic process + 6
                      pyrimidine ribonucleoside diphosphate biosynthetic process + 4
                      pyrimidine ribonucleoside diphosphate catabolic process + 2
paths to the root